mRNA_Ecto-sp13_S_contig8730.20196.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8730.20196.1 vs. uniprot
Match: D7G2T7_ECTSI (RGS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2T7_ECTSI) HSP 1 Score: 514 bits (1323), Expect = 1.880e-169 Identity = 278/306 (90.85%), Postives = 283/306 (92.48%), Query Frame = 1
Query: 1 STVRTASGVSSGRSRDSSRIRADSEEEVRLEEGDLGGVPGKGETPTAGGDGDVGNVVASAVIGNGVITTPTADTNGAVAAGTWNEREPINTSVITKRSSSVSNDTSIDGNRRDVVQRGQRERGSFRGRRGGGXXRGRPEREEMEVWNFERLARTPLLAVAFEDYSKRALCHESVLFLTEVSRYQHEDYATPTKDPTRSSPNQFGTFCFITNTFIKAGSPEEVNISDADKKRILELYQKGEEHFEDVNEEERRLIFGRAYLEVKSMLEANLLRRFLNTDRFKSVRMQRENVQAMMDSPPLQAGVAAA 918
STVRTASGVSSGRSRD SRIRA+SEEE RLEEGDLGGV K ET TAG DV NVVASAV+GNGVITT TADTN AVAAGTWNEREPINTSV TK+SSSVSNDTSI GNRRDVVQRG RER FRGRRGGG RGRPEREEMEVWNFERLARTPLLAVAFEDYSKRALCHESVLFLTEVSRYQHEDYATPTKD RSSP+QFGTFC+ITNTFIKAGSPEEVNISDADKKRILELYQKGEEHFEDVNEEERRLIFGRAYLEVKSMLEANLLRRFLNTDRFKSVRMQRENVQ MMDSPPL AGVAAA
Sbjct: 227 STVRTASGVSSGRSRDPSRIRANSEEEARLEEGDLGGVLDKDETTTAG---DVSNVVASAVVGNGVITTSTADTNDAVAAGTWNEREPINTSVFTKQSSSVSNDTSIGGNRRDVVQRGPRERAFFRGRRGGGGGRGRPEREEMEVWNFERLARTPLLAVAFEDYSKRALCHESVLFLTEVSRYQHEDYATPTKDAIRSSPSQFGTFCYITNTFIKAGSPEEVNISDADKKRILELYQKGEEHFEDVNEEERRLIFGRAYLEVKSMLEANLLRRFLNTDRFKSVRMQRENVQTMMDSPPLPAGVAAA 529
BLAST of mRNA_Ecto-sp13_S_contig8730.20196.1 vs. uniprot
Match: A0A6H5LEP9_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LEP9_9PHAE) HSP 1 Score: 338 bits (868), Expect = 5.930e-102 Identity = 201/305 (65.90%), Postives = 226/305 (74.10%), Query Frame = 1
Query: 7 VRTASGVSSGRSRDSSRIRADSEEEVRLEEGDLGGVPGKGETPTAG-GDGDVGNVVASAVIGNGVITTPTADTNGAVAAGTWNEREPINTSVITKRSSSVSNDTSIDGNRRDVVQRGQRERGSFRGRRGGGXXRGRPEREEMEVWNFERLARTPLLAVAFEDYSKRALCHESVLFLTEVSRYQHEDYATPTKDPTRSSPNQFGTFCFITNTFIKAGSPEEVNISDADKKRILELYQKGEEHFEDVNEEERRLIFGRAYLEVKSMLEANLLRRFLNTDRFKSVRMQRENVQAMMDSPPLQAGVAAA 918
R+ASG+S R+ SSRI DSE+EV E+ +LGGVPG T AG G G G V SAV+G+GVITT +AD NGAVA W RE I S+SV +S G RRD VQRGQR RG XX +REEMEVW+FERL RTPLLA AFEDYSKRALCHESVLFL+EVSRYQ++DYATPT + P QFGTFCFIT+TFIKAG+PEEVNI +K ILELYQKGEE FE+VNEEERR++F R+YL VKSMLEANLLRRFLNTD+FKSVR QRENVQAMMDSPPL AGV AA
Sbjct: 251 TRSASGISPERAGGSSRIVDDSEDEVAFEDEELGGVPGFDTTAAAGVGGGSTGKVATSAVVGSGVITTSSADANGAVAPCPWKGREL----TIANGSTSVPKGSSSTGKRRDAVQRGQRGRGXXXXXXXXXXXXX-SDREEMEVWDFERLGRTPLLAAAFEDYSKRALCHESVLFLSEVSRYQNDDYATPTNAAAGTCPTQFGTFCFITDTFIKAGAPEEVNI----RKLILELYQKGEESFEEVNEEERRMVFKRSYLAVKSMLEANLLRRFLNTDQFKSVRKQRENVQAMMDSPPLPAGVVAA 546
BLAST of mRNA_Ecto-sp13_S_contig8730.20196.1 vs. uniprot
Match: D7G2T8_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2T8_ECTSI) HSP 1 Score: 338 bits (867), Expect = 6.590e-101 Identity = 203/306 (66.34%), Postives = 231/306 (75.49%), Query Frame = 1
Query: 7 VRTASGVSSGRSRDSSRIRADSEEEVRLEEGDLGGVPGKGETPTAG-GDGDVGNVV-ASAVIGNGVITTPTADTNGAVAAGTWNEREPINTSVITKRSSSVSNDTSIDGNRRDVVQRGQRERGSFRGRRGGGXXRGRPEREEMEVWNFERLARTPLLAVAFEDYSKRALCHESVLFLTEVSRYQHEDYATPTKDPTRSSPNQFGTFCFITNTFIKAGSPEEVNISDADKKRILELYQKGEEHFEDVNEEERRLIFGRAYLEVKSMLEANLLRRFLNTDRFKSVRMQRENVQAMMDSPPLQAGVAAA 918
R+ASG+S R+ SSRI DS++EV E+ +LGGVPG T AG G G G V +SAV+G+GVITT TAD N VA TW RE I S+SV + G RRD VQRGQR RG XX +REEMEVW+FERL RTPLLA AFEDYSKRALCHESVLFL+EVSRYQ++DYATPT + + P QFGTFC+IT+TFIKAG+PEEVNISD D+K ILELYQKGEE FE+VNEEERR++F R+YLEVKSMLEANLLRRFLNTD+FKSVR QRENVQAMMDSPPL AGVAAA
Sbjct: 322 TRSASGISPERAGRSSRIVDDSDDEVAFEDEELGGVPGMDTTAAAGVGGGSTGKVATSSAVVGSGVITTSTADAN-VVAPRTWKGREM----TIANGSTSVPKGSGSTGKRRDAVQRGQRGRGXXXXXXXXXXXXP-SDREEMEVWDFERLGRTPLLAAAFEDYSKRALCHESVLFLSEVSRYQNDDYATPT-NAAGTCPTQFGTFCYITDTFIKAGAPEEVNISDKDRKLILELYQKGEESFEEVNEEERRMVFKRSYLEVKSMLEANLLRRFLNTDQFKSVRKQRENVQAMMDSPPLPAGVAAA 620
BLAST of mRNA_Ecto-sp13_S_contig8730.20196.1 vs. uniprot
Match: A0A6H5JE98_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE98_9PHAE) HSP 1 Score: 329 bits (843), Expect = 1.560e-97 Identity = 192/307 (62.54%), Postives = 225/307 (73.29%), Query Frame = 1
Query: 1 STVRTASGVSSGRSRDSSRIRADSEEEVRLEEGDLGGVPGKGETPTAGGDGDVGNVVASAVIGNGVITTPTADTNGAVAAGTWNEREPINTSVITKRSSSVSNDTSIDGNRRDVVQRGQRERGSFRGRRGGGXXRGRPEREEMEVWNFERLARTPLLAVAFEDYSKRALCHESVLFLTEVSRYQHEDYATPTKDPTRSS-PNQFGTFCFITNTFIKAGSPEEVNISDADKKRILELYQKGEEHFEDVNEEERRLIFGRAYLEVKSMLEANLLRRFLNTDRFKSVRMQRENVQAMMDSPPLQAGVAAA 918
ST R ASG SSG +SS + ++ E+E LEEG LG G T T G G V ASA IG V TT +AD NGAVA TW +REP N+SV+T + VSND GNR D V+RGQ E G RGR GG R R ++++++W+FER+ RTPLLAVAFEDYSK+ALCHES LFL+EVSRYQ+ DYA T+ + SS P QFGTFC+IT+TFIKAGSPEEVNISD ++K IL LY KGEE FEDVNEEERR+IF RAYL VK MLEANLL RFLNTDRFKSV MQ+E+ Q M+DSP LQAGVA +
Sbjct: 309 STARRASGFSSGLDCESSMMCSEREDETTLEEGKLGEALATGITTTEREGGSAGYVAASATIGKAV-TTSSADANGAVAPHTWTDREPTNSSVVTTATWFVSNDNGAGGNRLDGVRRGQSEIGLDRGRDGG--RRSRSHKQDIDIWDFERIVRTPLLAVAFEDYSKKALCHESFLFLSEVSRYQNGDYAMATRASSGSSCPTQFGTFCYITDTFIKAGSPEEVNISDKERKLILALYHKGEELFEDVNEEERRMIFRRAYLAVKRMLEANLLLRFLNTDRFKSVEMQKEDTQVMVDSPHLQAGVAVS 612
BLAST of mRNA_Ecto-sp13_S_contig8730.20196.1 vs. uniprot
Match: D7FTW1_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW1_ECTSI) HSP 1 Score: 300 bits (769), Expect = 1.390e-88 Identity = 181/301 (60.13%), Postives = 205/301 (68.11%), Query Frame = 1
Query: 7 VRTASGVSSGRSRDSSRIRADSEEEVRLEEGDLGGVPGKGETPTAGGDGDVGNVVASAVIGNGVITTPTADTNGAVAAGTWNEREPINTSVITKRSSSVSNDTSIDGNRRDVVQRGQRERGSFRGRRGGGXXRGRPEREEMEVWNFERLARTPLLAVAFEDYSKRALCHESVLFLTEVSRYQHEDYATPTKDPTRSSPN-QFGTFCFITNTFIKAGSPEEVNISDADKKRILELYQKGEEHFEDVNEEERRLIFGRAYLEVKSMLEANLLRRFLNTDRFKSVRMQRENVQAMMDSPPLQAG 906
VR G SS S R R DSEEE RLEEG GVPGK T AGGDGD G+V SA IG G T PTAD +GAVA TWNEREP N+SV+ + SSSVSND S G RR QR QR RGS R R G R R +REEMEVW+FER+A TPLLA AFEDYSKRALCHESVLFL+EVSRYQ+ +Y PT+ + SSP QFG+FC+IT+TFIKAGS EEVNI R+IF RAY +VK+MLEANL+ RFLNTDRFK+VR+QREN++AMM SPP Q G
Sbjct: 200 VRRELGFSSVIGGGSQRTRGDSEEEARLEEGQREGVPGKDTTTAAGGDGDTGDVPTSAAIGRGATTAPTADADGAVAPCTWNEREPTNSSVVAEGSSSVSNDNSTRG-RRGAFQRVQRARGSGRDR--GCSSRSRSDREEMEVWDFERIASTPLLAAAFEDYSKRALCHESVLFLSEVSRYQNNNYPMPTRASSASSPRIQFGSFCYITDTFIKAGSSEEVNI---------------------------RMIFSRAYRDVKNMLEANLVLRFLNTDRFKNVRVQRENMKAMMGSPPPQEG 470
BLAST of mRNA_Ecto-sp13_S_contig8730.20196.1 vs. uniprot
Match: D7G2T5_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2T5_ECTSI) HSP 1 Score: 267 bits (683), Expect = 9.030e-79 Identity = 152/202 (75.25%), Postives = 164/202 (81.19%), Query Frame = 1
Query: 325 GNRRDVVQRGQRERGSFRGR---RGGGXXRGRPEREEMEVWNFERLARTPLLAVAFEDYSKRALCHESVLFLTEVSRYQHEDYATPTKDPTRSS-PNQFGTFCFITNTFIKAGSPEEVNISDADKKRILELYQKGEEHFEDVNEEERRLIFGRAYLEVKSMLEANLLRRFLNTDRFKSVRMQRENVQAMMDSPP-LQAGVAA 915
GNRRD +QRGQR S RGR XX +R MEVWNFERLARTPLLA AFEDYSKRALCHESVLFL+EVSRYQ +DYAT + + SS P QFGTFC+IT+TFIK GSPEEVNISDADKK IL++Y KGEE F VNEE+RR+IF AYLEVKSMLEANLLRRFLNTDRFKSVRMQRENVQAMMDSPP L AGV A
Sbjct: 82 GNRRDALQRGQRN--STRGRGXXXXXXXXXXXQDRGVMEVWNFERLARTPLLAAAFEDYSKRALCHESVLFLSEVSRYQSDDYATSARPSSESSCPTQFGTFCYITDTFIKGGSPEEVNISDADKKAILDVYHKGEESFGGVNEEDRRMIFSPAYLEVKSMLEANLLRRFLNTDRFKSVRMQRENVQAMMDSPPMLPAGVGA 281
BLAST of mRNA_Ecto-sp13_S_contig8730.20196.1 vs. uniprot
Match: D7FTW2_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW2_ECTSI) HSP 1 Score: 253 bits (647), Expect = 1.820e-72 Identity = 136/194 (70.10%), Postives = 157/194 (80.93%), Query Frame = 1
Query: 316 SIDGNRRDVVQRGQRERGSFRGRRGGGXXRGRPEREEMEVWNFERLARTPLLAVAFEDYSKRALCHESVLFLTEVSRYQHEDYATPTKDPTRSS-PNQFGTFCFITNTFIKAGSPEEVNISDADKKRILELYQKGEEHFEDVNEEERRLIFGRAYLEVKSMLEANLLRRFLNTDRFKSVRMQRENVQAMMDSPP 894
SI GNR D V+RGQ ERG RGR GG R R ++++++W+FER+ RTPLLAVAFEDYSKRALCHES LFL+EVSRYQ+ DYAT + + SS P QFGTFC+IT+TFIKAGS EEVNISD ++K IL LY KGEE FEDVN EERR+IF RAYL VK MLEANLL RFLNTDRFKS+ MQ+EN Q M+DSPP
Sbjct: 171 SIGGNRLDAVRRGQTERGDDRGRDGG--RRSRSHKQDIDLWDFERIVRTPLLAVAFEDYSKRALCHESFLFLSEVSRYQNGDYATTKRASSGSSFPTQFGTFCYITDTFIKAGSHEEVNISDKERKLILALYHKGEELFEDVNVEERRMIFRRAYLAVKRMLEANLLLRFLNTDRFKSLEMQKENTQVMVDSPP 362
BLAST of mRNA_Ecto-sp13_S_contig8730.20196.1 vs. uniprot
Match: D7FTW0_ECTSI (RGS domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW0_ECTSI) HSP 1 Score: 256 bits (654), Expect = 8.850e-72 Identity = 136/194 (70.10%), Postives = 158/194 (81.44%), Query Frame = 1
Query: 316 SIDGNRRDVVQRGQRERGSFRGRRGGGXXRGRPEREEMEVWNFERLARTPLLAVAFEDYSKRALCHESVLFLTEVSRYQHEDYATPTKDPTRSS-PNQFGTFCFITNTFIKAGSPEEVNISDADKKRILELYQKGEEHFEDVNEEERRLIFGRAYLEVKSMLEANLLRRFLNTDRFKSVRMQRENVQAMMDSPP 894
SI GNR D V+RGQ ERG RGR GG R R ++++++W+FER+ RTPLLAVAFEDYSKRALCHES LFL+EVSRYQ+ DYAT + + SS P QFGTFC+IT+TFIKAGSPEEVNISD ++K IL LY KGEE FEDVN+ ERR+IF RAYL VK MLEANLL RFLNTDRFKS+ MQ+EN Q M+DSPP
Sbjct: 310 SIGGNRLDAVRRGQSERGDDRGRDGG--RRSRSHKQDIDLWDFERIVRTPLLAVAFEDYSKRALCHESFLFLSEVSRYQNGDYATTIRASSGSSFPTQFGTFCYITDTFIKAGSPEEVNISDKERKLILALYHKGEELFEDVNDAERRMIFRRAYLAVKRMLEANLLLRFLNTDRFKSLEMQKENTQVMVDSPP 501
BLAST of mRNA_Ecto-sp13_S_contig8730.20196.1 vs. uniprot
Match: A0A6H5LA03_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LA03_9PHAE) HSP 1 Score: 220 bits (561), Expect = 8.590e-58 Identity = 146/242 (60.33%), Postives = 162/242 (66.94%), Query Frame = 1
Query: 211 TADTNGAVAAGTWNEREPINTSVITKRSSSVSNDTSIDGNRRDVVQRGQRERGSFRGRRGGGXXRGRPE-----REEMEVWNFERLARTPLLAVAFEDYSKRALCHESVLFLTEVSRYQHEDYATPTKDPTRSS-PNQFGTFCFITNTFIKAGSPEEVNISDADKKRILELYQKGEEHFEDVNEEERRLIFGRAYLEVKSMLEANLLRRFLNTDRFKSVRMQRENVQAMMDSPP-LQAGVAA 915
T D +GA AA + + SS+S+ S GNRRD +QRGQR S G G XX R MEVW+FERLARTPLLAVAFEDYSKRALCHESVLFL+EVS YQ++DYAT T+ + SS P QFGT C+IT+TF KAGSPEEVN SDADKK I E N+ F AYL+VKSMLEANLLRRFLNTDRFKSVRMQRENVQAMMDSPP L AGV A
Sbjct: 408 TGDDDGATAAXXGXXXXAAPARGLARGISSLSSH-STGGNRRDALQRGQRN--STCGHGGXXXXXXXXXXXXXGRGVMEVWSFERLARTPLLAVAFEDYSKRALCHESVLFLSEVSWYQNDDYATQTRASSGSSCPTQFGTLCYITDTFTKAGSPEEVNTSDADKKAIFE------------ND------FSLAYLKVKSMLEANLLRRFLNTDRFKSVRMQRENVQAMMDSPPVLPAGVGA 628
BLAST of mRNA_Ecto-sp13_S_contig8730.20196.1 vs. uniprot
Match: D7FTV9_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTV9_ECTSI) HSP 1 Score: 186 bits (471), Expect = 3.880e-51 Identity = 99/161 (61.49%), Postives = 118/161 (73.29%), Query Frame = 1
Query: 427 MEVWNFERLARTPLLAVAFEDYSKRALCHESVLFLTEVSRYQHEDYATPTKDPTRSSPN-QFGTFCFITNTFIKAGSPEEVNISDADKKRILELYQKGEEHFEDVNEEERRLIFGRAYLEVKSMLEANLLRRFLNTDRFKSVRMQRENVQAMMDSPPLQAG 906
MEVW+FER+A TPLLA AFEDYSKRALCHESVLFL+EVSRYQ+ +Y PT+ + SSP QFG+FC+IT+TFIKAGSPEEVNI R+IF RA+ +VK+MLEANL+ RFLNTDRFK+VR+QREN++AMM SPP Q G
Sbjct: 1 MEVWDFERIASTPLLAAAFEDYSKRALCHESVLFLSEVSRYQNNNYPMPTRASSASSPRIQFGSFCYITDTFIKAGSPEEVNI---------------------------RMIFSRAHRDVKNMLEANLVLRFLNTDRFKNVRVQRENMKAMMGSPPPQEG 134 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8730.20196.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8730.20196.1 >prot_Ecto-sp13_S_contig8730.20196.1 ID=prot_Ecto-sp13_S_contig8730.20196.1|Name=mRNA_Ecto-sp13_S_contig8730.20196.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=165bp MEVWNFERLARTPLLAVAFEDYSKRALCHESVLFLTEVSRYQHEDYATPTback to top mRNA from alignment at Ecto-sp13_S_contig8730:522..5585+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8730.20196.1 ID=mRNA_Ecto-sp13_S_contig8730.20196.1|Name=mRNA_Ecto-sp13_S_contig8730.20196.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5064bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8730:522..5585+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8730:522..5585+ >mRNA_Ecto-sp13_S_contig8730.20196.1 ID=mRNA_Ecto-sp13_S_contig8730.20196.1|Name=mRNA_Ecto-sp13_S_contig8730.20196.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=495bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8730:522..5585+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |