prot_Ecto-sp13_S_contig8722.20187.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8722.20187.1
Unique Nameprot_Ecto-sp13_S_contig8722.20187.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length146
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8722.20187.1 vs. uniprot
Match: D7FH67_ECTSI (Hemerythrin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH67_ECTSI)

HSP 1 Score: 257 bits (656), Expect = 9.140e-86
Identity = 140/146 (95.89%), Postives = 143/146 (97.95%), Query Frame = 0 
Query:    1 MFVHGKFRSSATSVVQAAESMQSGVEGGCSSTKTESAVGKIERSLRSLLGKVAKHSDFEDSQLFRFFKENLPDLEGQIRDLEADHSETQLGNDALDRIRNLRSAPTTAGAVSGGADVASAQAVVIALKAYAESLESHLEREERVLV 146
            MFVHGKFRSSATS+VQAAESMQSGVEGGCSSTKTESAVGKIERSLRSLLGKVAKHSDFED+QLF FFKENLPDLEGQIRDLEADHSET LGNDALDRIRNLRSAPTTAGAVSGGADVASAQAVV+ALKAYAESLE HLEREERVLV
Sbjct:    1 MFVHGKFRSSATSIVQAAESMQSGVEGGCSSTKTESAVGKIERSLRSLLGKVAKHSDFEDAQLFLFFKENLPDLEGQIRDLEADHSETNLGNDALDRIRNLRSAPTTAGAVSGGADVASAQAVVVALKAYAESLEIHLEREERVLV 146
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BLAST of mRNA_Ecto-sp13_S_contig8722.20187.1 vs. uniprot
Match: A0A6H5JCA2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCA2_9PHAE)

HSP 1 Score: 115 bits (289), Expect = 6.100e-31
Identity = 62/70 (88.57%), Postives = 67/70 (95.71%), Query Frame = 0 
Query:   77 QIRDLEADHSETQLGNDALDRIRNLRSAPTTAGAVSGGADVASAQAVVIALKAYAESLESHLEREERVLV 146
            ++ DLEADHSET LGN+ALDR+RNLRSAPTTAGAVSGGADVASAQAVV+ALKAYAESLE HLEREERVLV
Sbjct:    3 RVLDLEADHSETNLGNEALDRVRNLRSAPTTAGAVSGGADVASAQAVVVALKAYAESLEIHLEREERVLV 72
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8722.20187.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FH67_ECTSI9.140e-8695.89Hemerythrin domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5JCA2_9PHAE6.100e-3188.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 64..84
NoneNo IPR availableGENE3D1.20.120.520coord: 1..146
e-value: 3.2E-12
score: 48.9
IPR012312Haemerythrin-likePFAMPF01814Hemerythrincoord: 28..146
e-value: 4.3E-11
score: 43.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8722contigEcto-sp13_S_contig8722:4119..6679 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8722.20187.1mRNA_Ecto-sp13_S_contig8722.20187.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8722 4119..6679 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8722.20187.1 ID=prot_Ecto-sp13_S_contig8722.20187.1|Name=mRNA_Ecto-sp13_S_contig8722.20187.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=146bp
MFVHGKFRSSATSVVQAAESMQSGVEGGCSSTKTESAVGKIERSLRSLLG
KVAKHSDFEDSQLFRFFKENLPDLEGQIRDLEADHSETQLGNDALDRIRN
LRSAPTTAGAVSGGADVASAQAVVIALKAYAESLESHLEREERVLV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012312Haemerythrin-like