prot_Ecto-sp13_S_contig12429.2018.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12429.2018.1
Unique Nameprot_Ecto-sp13_S_contig12429.2018.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length152
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12429.2018.1 vs. uniprot
Match: A0A6H5K875_9PHAE (Calpain catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K875_9PHAE)

HSP 1 Score: 121 bits (304), Expect = 3.790e-29
Identity = 73/102 (71.57%), Postives = 86/102 (84.31%), Query Frame = 0 
Query:   46 CGGRFTEGK---GWLQGTQVFLQIGPRNSSSQHRSSSGGTTTATSGLGSITATGAVAPSSGTPKSAHNKDDTAQVLITITQEDSRYHRRDYTERGERRRSIG 144
            CG R+ EG+   G + G +V+ +IGPR+SS   R++SGGTTT TSG G  TATGAVAPSSGTPKSA+NKD+TAQVLIT+TQEDSRYHR+DYTERGERRRSIG
Sbjct:  479 CGRRWIEGRALPGVVGGRRVWGKIGPRDSSI--RNNSGGTTT-TSGFGITTATGAVAPSSGTPKSAYNKDNTAQVLITVTQEDSRYHRKDYTERGERRRSIG 577
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BLAST of mRNA_Ecto-sp13_S_contig12429.2018.1 vs. uniprot
Match: D8LKI3_ECTSI (Calpain 8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKI3_ECTSI)

HSP 1 Score: 109 bits (273), Expect = 5.580e-25
Identity = 62/72 (86.11%), Postives = 66/72 (91.67%), Query Frame = 0 
Query:   49 RFTEGKGWLQGTQVFLQIGPRNSSSQHRSSSGGTTTATSGLGSITATGAVAPSSGTPKSAHNKDDTAQVLIT 120
            RFTEGKGWLQGTQVFL+IGPR+SS  +  SSGGTTT+ SGLGS TATGAVAPSSGTPKSAHNKDDTAQVLIT
Sbjct:  448 RFTEGKGWLQGTQVFLEIGPRDSSIHN--SSGGTTTS-SGLGSTTATGAVAPSSGTPKSAHNKDDTAQVLIT 516
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12429.2018.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K875_9PHAE3.790e-2971.57Calpain catalytic domain-containing protein n=1 Ta... [more]
D8LKI3_ECTSI5.580e-2586.11Calpain 8 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12429contigEcto-sp13_S_contig12429:2092..4022 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12429.2018.1mRNA_Ecto-sp13_S_contig12429.2018.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12429 2092..4022 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12429.2018.1 ID=prot_Ecto-sp13_S_contig12429.2018.1|Name=mRNA_Ecto-sp13_S_contig12429.2018.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=152bp
AAKVTSNGTNGPAPRPSTAPGAASELAAGAGSREGRCQGSWEGEGCGGRF
TEGKGWLQGTQVFLQIGPRNSSSQHRSSSGGTTTATSGLGSITATGAVAP
SSGTPKSAHNKDDTAQVLITITQEDSRYHRRDYTERGERRRSIGTSFATD
R*
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