mRNA_Ecto-sp13_S_contig12428.2017.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig12428.2017.1
Unique NamemRNA_Ecto-sp13_S_contig12428.2017.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig12428.2017.1 vs. uniprot
Match: A0A6H5JIG8_9PHAE (Nudix hydrolase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIG8_9PHAE)

HSP 1 Score: 594 bits (1532), Expect = 1.090e-210
Identity = 296/305 (97.05%), Postives = 301/305 (98.69%), Query Frame = 1
Query:    1 ELEWAERASGSGKEDTAVIQFHSFQEAALRRFGGLGVIKEDKAEDIHTLVESFTAPALAAALRDRETALHMCAHLLEQGDLSGVRKVLLPFTAKQVAESRRALGRLDLEPEGFTKTHMYALRKVLQRLPRHVTTLTEQRASVMVPLCNVDGVASVLFTKRSGNMRAYKNDVCFPGGKVDIGQDQHIIQTAVREMGEEIGILESSVDVLGVLRCDWSEVASLIGVAVTPVVGFLGNLSLEQIHPNPDEVSHCFTIPVRFLLEEDRWQVDKYAAPAFVGGPYQIWGLTGYILRRLVNDVLRQHLAVM 915
            E EWAERASGSGKEDTAVIQFHS +EAALRRF G GVIKEDKAEDIHTLVESFTAPALAAALRDRETALHMCAHLLEQGDLSGVRKVLLPFTAKQVAESRRALGRLDLEPEGFTKTHMYALRKVLQRLPRHVTTLTEQRASVMVPLCNVDGVASVLFTKRSGN+RAYKNDVCFPGGKVDIGQDQHIIQTAVREMGEEIGILESSVDVLGVLRCDWSEVASLIGVAVTPVVGFLGNLSLEQIHPNPDEVSHCFTIPVRFLL+EDRWQV+KYAAPAFVGGPYQIWGLTGYILRRLVNDVLRQHLAV+
Sbjct:  237 EHEWAERASGSGKEDTAVIQFHSLKEAALRRFEGFGVIKEDKAEDIHTLVESFTAPALAAALRDRETALHMCAHLLEQGDLSGVRKVLLPFTAKQVAESRRALGRLDLEPEGFTKTHMYALRKVLQRLPRHVTTLTEQRASVMVPLCNVDGVASVLFTKRSGNLRAYKNDVCFPGGKVDIGQDQHIIQTAVREMGEEIGILESSVDVLGVLRCDWSEVASLIGVAVTPVVGFLGNLSLEQIHPNPDEVSHCFTIPVRFLLQEDRWQVNKYAAPAFVGGPYQIWGLTGYILRRLVNDVLRQHLAVI 541          
BLAST of mRNA_Ecto-sp13_S_contig12428.2017.1 vs. uniprot
Match: D7FSP6_ECTSI (Nudix hydrolase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSP6_ECTSI)

HSP 1 Score: 593 bits (1530), Expect = 3.120e-210
Identity = 296/304 (97.37%), Postives = 299/304 (98.36%), Query Frame = 1
Query:    1 ELEWAERASGSGKEDTAVIQFHSFQEAALRRFGGLGVIKEDKAEDIHTLVESFTAPALAAALRDRETALHMCAHLLEQGDLSGVRKVLLPFTAKQVAESRRALGRLDLEPEGFTKTHMYALRKVLQRLPRHVTTLTEQRASVMVPLCNVDGVASVLFTKRSGNMRAYKNDVCFPGGKVDIGQDQHIIQTAVREMGEEIGILESSVDVLGVLRCDWSEVASLIGVAVTPVVGFLGNLSLEQIHPNPDEVSHCFTIPVRFLLEEDRWQVDKYAAPAFVGGPYQIWGLTGYILRRLVNDVLRQHLAV 912
            E EWAERA+GSGKEDTAVIQFHS QEAALRRF GLGVIKEDKAEDIHTLVESFTAPALAAALRDRETALHMCAHLLEQGDLSGVR+VLLPFTAKQVAESRRALGRLDLEPEGFTKTHMYALRKVLQRLPRHVTTLTEQRASVMVPLCNVDGVASVLFTKRSGNMRAYKNDVCFPGGKVDIGQDQHII+TAVREMGEEIGILESSVDVLGVLRCDWSEVASLIGVAVTPVVGFLGNLS EQIHPNPDEVSHCFTIPVRFLLEEDRWQVDKYAAPAFVGGPYQIWGLTGYIL RLVNDVLRQHLAV
Sbjct:  247 EHEWAERAAGSGKEDTAVIQFHSLQEAALRRFEGLGVIKEDKAEDIHTLVESFTAPALAAALRDRETALHMCAHLLEQGDLSGVRRVLLPFTAKQVAESRRALGRLDLEPEGFTKTHMYALRKVLQRLPRHVTTLTEQRASVMVPLCNVDGVASVLFTKRSGNMRAYKNDVCFPGGKVDIGQDQHIIETAVREMGEEIGILESSVDVLGVLRCDWSEVASLIGVAVTPVVGFLGNLSQEQIHPNPDEVSHCFTIPVRFLLEEDRWQVDKYAAPAFVGGPYQIWGLTGYILHRLVNDVLRQHLAV 550          
BLAST of mRNA_Ecto-sp13_S_contig12428.2017.1 vs. uniprot
Match: A0A7S2USV2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USV2_9STRA)

HSP 1 Score: 290 bits (741), Expect = 6.030e-93
Identity = 137/272 (50.37%), Postives = 197/272 (72.43%), Query Frame = 1
Query:   88 RRFGGLGVIKEDKAEDIHTLVESFTAPALAAALRDRETALHMCAHLLEQGDLSGVRKVLLPFTAKQVAESRRALGRLDLEPEGFTKTHMYALRKVLQRLPRHVTTLTEQRASVMVPLCNVDGVASVLFTKRSGNMRAYKNDVCFPGGKVDIGQDQHIIQTAVREMGEEIGILESSVDVLGVLRCDWSEVASLIGVAVTPVVGFLGNLSLEQIHPNPDEVSHCFTIPVRFLLEEDRWQVDKYAAPAFVGGPYQIWGLTGYILRRLVNDVLRQH 903
            R+  GLGVI  DK +D+  LV+++TAPALA+ALRDRE  LH+ A LLE  +L  +RK+L PF    +   R     ++L  EGF   H++ +RK L R+PR ++    +RA+V++ LCNVDGV S+LF+KRS  + ++KN+VCFPGG VD  QD ++++T +RE+ EEIGI +++V++LGVLRCDW EV S++GVAVTPVVGF+ +LSL+++ PNPDEVS+CF++P++ LL+   W   +Y+   F GGPY IWGLT YIL   + +VL ++
Sbjct:   98 RKRSGLGVISPDKTQDLDLLVKNYTAPALASALRDREEVLHVAAQLLESEELDELRKLLRPFHHSNLERHRTKKRDMNLS-EGFQAKHLHMIRKYLHRMPRQISRSASRRAAVLLTLCNVDGVPSILFSKRSDKVTSHKNEVCFPGGHVD-EQDDNVVETCLREVREEIGIPDTTVEILGVLRCDWGEVESIVGVAVTPVVGFIDDLSLKKLKPNPDEVSNCFSVPIKSLLKRKNWVSGEYSKHVFTGGPYLIWGLTAYILDTFLKEVLMRY 367          
BLAST of mRNA_Ecto-sp13_S_contig12428.2017.1 vs. uniprot
Match: A0A4D9DAL0_9STRA (Nudix hydrolase domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DAL0_9STRA)

HSP 1 Score: 277 bits (709), Expect = 5.180e-89
Identity = 145/297 (48.82%), Postives = 196/297 (65.99%), Query Frame = 1
Query:   16 ERASGSGKEDTAVIQFHSFQEAALRRFGGLGVIKEDKAEDIHTLVESFTAPALAAALRDRETALHMCAHLLEQGDLSGVRKVLLPFTAKQVAESRRALGRLDLEPEGFTKTHMYALRKVLQRLPRHVTTLTEQRASVMVPLCNVDGVASVLFTKRSGNMRAYKNDVCFPGGKVDIGQDQHIIQTAVREMGEEIGILESSVDVLGVLRCDWSEVASLIGVAVTPVVGFLGNLSLEQIHPNPDEVSHCFTIPVRFLLEEDRW-QVDKYAAPAFVGGPYQIWGLTGYILRRLVNDVLRQH 903
            E+ S + K  TA  +  S    A  +F  LGVI+  K  D+  ++ ++T PALAA LRDRE  L  CA LLE G+L  + +VL P+ A+ +   RR    LDL   G T  H+  LRK LQR PR +T     RASV++PLCNV+GVASVLF +RS  +R++KN VCFPGG V+   D +II+T++REM EEIG    SVDVLGVLRCDWSEV  + G+ VTPVVGFLG+L+ +++ PNP EV+ CFTIP+  LL+ + W + ++     FVGGP+ IWGLT ++L   + D+L ++
Sbjct:   24 EQMSANEKSHTAATENKSLHSHA--QFKSLGVIEPSKDLDLQLMITNYTLPALAAGLRDREETLQFCARLLEDGNLEQLERVLHPYQAELITRRRRKTRSLDLAG-GLTSKHLNMLRKYLQRSPRQLTRAVSLRASVVIPLCNVNGVASVLFERRSPFVRSFKNQVCFPGGMVEESLDVNIIETSLREMEEEIGFPARSVDVLGVLRCDWSEVHKITGIGVTPVVGFLGDLTEKELSPNPKEVAECFTIPLATLLDVEHWNREEEKGTVVFVGGPHVIWGLTAHLLDIFLKDILMRY 317          
BLAST of mRNA_Ecto-sp13_S_contig12428.2017.1 vs. uniprot
Match: A0A7S3Y7X1_9EUKA (Hypothetical protein n=2 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Y7X1_9EUKA)

HSP 1 Score: 268 bits (686), Expect = 2.940e-84
Identity = 140/293 (47.78%), Postives = 197/293 (67.24%), Query Frame = 1
Query:   37 KEDTAVIQFHSFQEAALRRFGGLGVIKEDKAEDIHTLVESFTAPALAAALRDRETALHMCAHLLEQGDLSGVRKVLLPFTAKQVAESRRALGRLDLEPEGFTKTHMYALRKVLQRLPRHVTTLTEQRASVMVPLCNVDGVASVLFTKRSGNMRAYKNDVCFPGGKVDIGQDQHIIQTAVREMGEEIGILESSVDVLGVLRCDWSEVASLIGVAVTPVVGFLGNLS-LEQIHPNPDEVSHCFTIPVRFLLEEDRW---QVDKYAAPAFVGGPYQIWGLTGYILRRLVNDVLRQH 903
            KE   + +F     +A++   G GVI EDKA D+  LV++FTAPALAAALRDRE  LH+CA LLE+  +  + KVL PF   +++E R    ++ L  EGF   H+Y +RK L R+PR +    E+RASV++PLCN  GVA +LF +RS  +R++K+ VCFPGG VD   D +I++T +REM EE+GI ++  DV GVLRCDW  +A ++GV+VTPVVG++G++   +  + NPDEV   FTIP+  LL +D W   +VD      F GGPY+IWGLT ++L R + DVL+++
Sbjct:   90 KEKRKMDEFTGLDLSAIK---GYGVIHEDKARDLKHLVDNFTAPALAAALRDREETLHICATLLEEDRMDELHKVLRPFHTTKISERRLKRRKMFLH-EGFKSEHIYMIRKYLHRMPRQLPRYAEKRASVILPLCNSQGVACLLFQRRSDTVRSHKSQVCFPGGVVDNRLDANIVETCLREMHEEMGI-DAVQDVCGVLRCDWGTIAKIVGVSVTPVVGWMGDIEDYDFSNMNPDEVEAAFTIPIEDLLNQDSWHIQEVDGVPHLEFDGGPYRIWGLTAFLLHRFLQDVLKRY 377          
BLAST of mRNA_Ecto-sp13_S_contig12428.2017.1 vs. uniprot
Match: A0A7S3MB31_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MB31_9STRA)

HSP 1 Score: 262 bits (669), Expect = 9.190e-84
Identity = 127/255 (49.80%), Postives = 177/255 (69.41%), Query Frame = 1
Query:  130 EDIHTLVESFTAPALAAALRDRETALHMCAHLLEQGDLSGVRKVLLPFTAKQVAESRRALGRLDLEPEGFTKTHMYALRKVLQRLPRHVTTLTEQRASVMVPLCNVDGVASVLFTKRSGNMRAYKNDVCFPGGKVDIGQDQHIIQTAVREMGEEIGILESSVDVLGVLRCDWSEVASLIGVAVTPVVGFLGNLSLEQIHPNPDEVSHCFTIPVRFLLEEDRWQVDKYAAPAFVGGPYQIWGLTGYILRRLVNDVL 894
            +DI+ LV++FTAPALA ALRDRE  L   A L   G+   ++++L+PF  + V   R     LDL  +GFT+  +  L++ L R+PRHV    E+RASV++PLCNV+GVASVLF +RS  +R +K  VCFPGG +D G D  IIQT++REM EE+GI    ++VLG+LRC+W+EVAS+ G+AVTPV+GF+G L+   + PN DEV   FTIP+  LL+E +W    ++ P F GGP+ IWGLT Y+L + + +V+
Sbjct:    4 DDINVLVQNFTAPALAEALRDREITLQRAATLFFSGETEELKELLVPFLDESVERRRLRHHHLDLS-KGFTRKEIVILQRYLHRMPRHVFHNAERRASVIIPLCNVNGVASVLFERRSMKVRTHKQQVCFPGGMLDEGVDSTIIQTSLREMEEELGIPREKIEVLGILRCNWNEVASMTGIAVTPVIGFIGELNDLVLTPNSDEVEQYFTIPLDDLLDEQKWLTRNFSTPVFTGGPHTIWGLTAYLLEKFLKEVV 257          
BLAST of mRNA_Ecto-sp13_S_contig12428.2017.1 vs. uniprot
Match: B8CB77_THAPS (Nudix hydrolase domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CB77_THAPS)

HSP 1 Score: 270 bits (690), Expect = 3.010e-83
Identity = 130/271 (47.97%), Postives = 183/271 (67.53%), Query Frame = 1
Query:  103 LGVIKEDKAEDIHTLVESFTAPALAAALRDRETALHMCAHLLEQGDLSGVRKVLLPFTAKQVAESRRALGR-LDLEPEGFTKTHMYALRKVLQRLPRHVTTLTEQRASVMVPLCNVDGVASVLFTKRSGNMRAYKNDVCFPGGKVDIGQDQHIIQTAVREMGEEIGILESSVDVLGVLRCDWSEVASLIGVAVTPVVGFLGNLSLEQIHPNPDEVSHCFTIPVRFLLEEDRWQVDKYAAPAFVGGPYQIWGLTGYILRRLVNDVLRQHLAV 912
            LGV++ED  ED+  L+E++T  ALA+ALRDRE  L +CA+LL    +  V K+L P+  K + + R + G+ LD    GF    +  +RK L R+ R V+T   +RA V++PLCNVDGV  +LF KRS ++RA+ ++VC PGG V  G D+ I+QT +REM EEIGI  ++  VLGVLRC+W EV  L+GVAVTPVV ++G + + Q++PN DEV+  FT+P+   L+ DRW   K+ AP F G P+ IWGLTGYI+ R V D++ ++  V
Sbjct:  277 LGVLREDPHEDMRLLLENYTVAALASALRDREDTLQLCANLLSSNRIEEVSKILRPYEPKYIHQRRHSKGKMLDFRRGGFDNQSIELIRKGLNRMHRRVSTAHSKRAGVVLPLCNVDGVPCILFEKRSRDLRAHPDEVCLPGGMVSEGGDKSIVQTCLREMEEEIGIEHNAASVLGVLRCNWGEVHHLVGVAVTPVVCYIGQVGMSQLNPNSDEVAEVFTVPLELFLDRDRWVHKKHYAPFFTGSPHIIWGLTGYIIHRFVMDIIERYTVV 547          
BLAST of mRNA_Ecto-sp13_S_contig12428.2017.1 vs. uniprot
Match: A0A482SUV1_9ARCH (CoA pyrophosphatase (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SUV1_9ARCH)

HSP 1 Score: 262 bits (670), Expect = 9.330e-83
Identity = 122/266 (45.86%), Postives = 177/266 (66.54%), Query Frame = 1
Query:  103 LGVIKEDKAEDIHTLVESFTAPALAAALRDRETALHMCAHLLEQGDLSGVRKVLLPFTAKQVAESRRALGRLDLEPEGFTKTHMYALRKVLQRLPRHVTTLTEQRASVMVPLCNVDGVASVLFTKRSGNMRAYKNDVCFPGGKVDIGQDQHIIQTAVREMGEEIGILESSVDVLGVLRCDWSEVASLIGVAVTPVVGFLGNLSLEQIHPNPDEVSHCFTIPVRFLLEEDRWQVDKYAAPAFVGGPYQIWGLTGYILRRLVNDVLRQ 900
            +G+    +++DI  LV +FTAPALA ALRDRE  L   A L +QGD   ++ +L PF  K + +SR      DL   GF++  +  ++  L R+PR+V   +E+RASV++PLCNV G+ S+LF +RS  +R +K  VCFPGG V+ G D  +I+T +REM EE+G+     +VLG+LRC+W+EVAS+ G+AVTPVVG++G L    + PN DEV   FT+P+  +++E +W    +  PAF GGP+ IWGLTGY+L R   D+L++
Sbjct:   85 VGIFHSAESDDIQELVNNFTAPALATALRDREDILQNAALLADQGDFERLKNLLFPFLKKNIEQSRMRNFSFDLS-NGFSRKALLLIQGYLHRMPRYVYHGSERRASVVIPLCNVQGIPSILFERRSATVRTHKQQVCFPGGMVEYGVDASVIETCLREMEEELGVPSDKTEVLGILRCNWNEVASMTGIAVTPVVGYIGELKDITLKPNADEVEKYFTVPIHEIMDEKKWLSSSFTTPAFTGGPHTIWGLTGYLLERFRRDILQK 349          
BLAST of mRNA_Ecto-sp13_S_contig12428.2017.1 vs. uniprot
Match: A0A7S2EIB7_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EIB7_TRICV)

HSP 1 Score: 253 bits (645), Expect = 4.610e-80
Identity = 131/255 (51.37%), Postives = 169/255 (66.27%), Query Frame = 1
Query:  145 LVESFTAPALAAALRDRETALHMCAHLLEQGDLSGVRKVLLPFTAKQVAESRRALGRLDLEPEGFTK-THMYALRKVLQRLPRHVTTLTEQRASVMVPLCNVDGVASVLFTKRSGNMRAYKNDVCFPGGKVDIGQDQHIIQTAVREMGEEI-GILESSVDVLGVLRCDWSEVASLIGVAVTPVVGFLGNLSLEQIHPNPDEVSHCFTIPVRFLLEEDRWQVDKYAAPAFVGGPYQIWGLTGYILRRLVNDVLRQH 903
            ++E++T PALA+ALRDRE  L +CA LL Q  L  +R VLLPF  + V   R+   RLDL   GF     +  LRK L R+PR V     QRA V++PLC+V G+  VLF KRS ++RA+ ++VC PGG V IG D+ I+ T +REM EEI G+ +  V VLGVLRC+W EV  L GVAVTPVV ++G +    + PN DEV+ CFT+P+  +L+ DRW   +  AP F GGPY IWGLTGYIL R V DVL ++
Sbjct:    4 MIENYTVPALASALRDREDILQLCAALLSQDRLDELRDVLLPFERRFVEMRRKRETRLDLRASGFGNLASLEMLRKGLGRMPRRVGLAHRQRAGVVLPLCDVGGIPCVLFEKRSRHLRAHPDEVCLPGGMVSIGDDKSIVSTCLREMYEEIDGLDQGLVTVLGVLRCNWGEVHHLTGVAVTPVVCYVGEIGHMDLKPNADEVAECFTVPLEAILDRDRWVHRQNFAPIFTGGPYIIWGLTGYILERFVKDVLARY 258          
BLAST of mRNA_Ecto-sp13_S_contig12428.2017.1 vs. uniprot
Match: A0A7S3V6J2_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V6J2_9STRA)

HSP 1 Score: 254 bits (649), Expect = 1.660e-78
Identity = 131/278 (47.12%), Postives = 180/278 (64.75%), Query Frame = 1
Query:   73 QEAALRRFGGLGVIKEDKAEDIHTLVESFTAPALAAALRDRETALHMCAHLLEQGDLSGVRKVLLPFTAKQVAESRRALGRLDLEPEGFTKTHMYALRKVLQRLPRHVTTLTEQRASVMVPLCNVDGVASVLFTKRSGNMRAYKNDVCFPGGKVDIGQDQHIIQTAVREMGEEI-GILESSVDVLGVLRCDWSEVASLIGVAVTPVVGFLGNLSLEQIHPNPDEVSHCFTIPVRFLLEEDRWQVDKYAAPAFVGGPYQIWGLTGYILRRLVNDVLRQH 903
            +E    R   LGV++ED  ED+  L+E++T PALA+ALRDRE  L +CA L  +  +  +  +L PF  K V + R +   LDL  +GF   ++  +RK L R+PR V+    +RA V++PLCNV+GV  VLF KRS  +RA+ ++VC PGG V    D+ I+ T +REM EEI GI E++V  LGVLRC+W EV  L+GVAVTPVV ++G +   QI PN DEV+  FT+P+   L++D W   +  AP F GGP+ IWGLTGY++ R V DVL  +
Sbjct:  147 REGGRMRERKLGVLREDPKEDMRLLIENYTVPALASALRDREDVLQLCATLFAEQKMEELSMILRPFERKYVEKRRLSKINLDLT-KGFDSANIQQVRKGLNRMPRRVSQAHSRRAGVVLPLCNVNGVPCVLFEKRSAQLRAHADEVCLPGGMVSAASDKSIVATCLREMDEEIEGIGEATV--LGVLRCNWGEVHHLVGVAVTPVVCYIGEIGDSQISPNSDEVAEAFTVPLSLFLDQDHWVHRQDFAPTFTGGPHVIWGLTGYVMNRFVKDVLATY 421          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12428.2017.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JIG8_9PHAE1.090e-21097.05Nudix hydrolase domain-containing protein n=1 Tax=... [more]
D7FSP6_ECTSI3.120e-21097.37Nudix hydrolase domain-containing protein n=1 Tax=... [more]
A0A7S2USV2_9STRA6.030e-9350.37Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A4D9DAL0_9STRA5.180e-8948.82Nudix hydrolase domain-containing protein n=3 Tax=... [more]
A0A7S3Y7X1_9EUKA2.940e-8447.78Hypothetical protein n=2 Tax=Lotharella globosa Ta... [more]
A0A7S3MB31_9STRA9.190e-8449.80Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
B8CB77_THAPS3.010e-8347.97Nudix hydrolase domain-containing protein n=1 Tax=... [more]
A0A482SUV1_9ARCH9.330e-8345.86CoA pyrophosphatase (Fragment) n=1 Tax=archaeon Ta... [more]
A0A7S2EIB7_TRICV4.610e-8051.37Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S3V6J2_9STRA1.660e-7847.12Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12428contigEcto-sp13_S_contig12428:424..4917 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score594.3
Seed ortholog evalue3.1e-167
Seed eggNOG ortholog2880.D7FSP6
Model size918
KEGG koko:K18665
Hectar predicted targeting categoryother localisation
Exons8
EggNOG free text desc.CoA pyrophosphatase activity
EggNOG OGsCOG0494@1,KOG3069@2759
Ec32 ortholog descriptionNUDIX hydrolase domain
Ec32 orthologEc-03_003030.1
Cds size918
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12428.2017.1prot_Ecto-sp13_S_contig12428.2017.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig12428 424..4917 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462661.813154-CDS-Ecto-sp13_S_contig12428:423..5501681462661.813154-CDS-Ecto-sp13_S_contig12428:423..550Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12428 424..550 -
1681462661.8244221-CDS-Ecto-sp13_S_contig12428:1460..15101681462661.8244221-CDS-Ecto-sp13_S_contig12428:1460..1510Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12428 1461..1510 -
1681462661.8362775-CDS-Ecto-sp13_S_contig12428:2272..24011681462661.8362775-CDS-Ecto-sp13_S_contig12428:2272..2401Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12428 2273..2401 -
1681462661.8461542-CDS-Ecto-sp13_S_contig12428:2901..29821681462661.8461542-CDS-Ecto-sp13_S_contig12428:2901..2982Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12428 2902..2982 -
1681462661.855662-CDS-Ecto-sp13_S_contig12428:3442..35571681462661.855662-CDS-Ecto-sp13_S_contig12428:3442..3557Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12428 3443..3557 -
1681462661.8648398-CDS-Ecto-sp13_S_contig12428:4038..42201681462661.8648398-CDS-Ecto-sp13_S_contig12428:4038..4220Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12428 4039..4220 -
1681462661.8745134-CDS-Ecto-sp13_S_contig12428:4444..45581681462661.8745134-CDS-Ecto-sp13_S_contig12428:4444..4558Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12428 4445..4558 -
1681462661.883819-CDS-Ecto-sp13_S_contig12428:4797..49171681462661.883819-CDS-Ecto-sp13_S_contig12428:4797..4917Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig12428 4798..4917 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig12428.2017.1

>prot_Ecto-sp13_S_contig12428.2017.1 ID=prot_Ecto-sp13_S_contig12428.2017.1|Name=mRNA_Ecto-sp13_S_contig12428.2017.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=306bp
ELEWAERASGSGKEDTAVIQFHSFQEAALRRFGGLGVIKEDKAEDIHTLV
ESFTAPALAAALRDRETALHMCAHLLEQGDLSGVRKVLLPFTAKQVAESR
RALGRLDLEPEGFTKTHMYALRKVLQRLPRHVTTLTEQRASVMVPLCNVD
GVASVLFTKRSGNMRAYKNDVCFPGGKVDIGQDQHIIQTAVREMGEEIGI
LESSVDVLGVLRCDWSEVASLIGVAVTPVVGFLGNLSLEQIHPNPDEVSH
CFTIPVRFLLEEDRWQVDKYAAPAFVGGPYQIWGLTGYILRRLVNDVLRQ
HLAVM*
back to top

mRNA from alignment at Ecto-sp13_S_contig12428:424..4917-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig12428.2017.1 ID=mRNA_Ecto-sp13_S_contig12428.2017.1|Name=mRNA_Ecto-sp13_S_contig12428.2017.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4494bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12428:424..4917- (Ectocarpus species13 EcNAP12_S_4_19m)
GAGCTCGAGTGGGCGGAAAGGGCGTCAGGCTCGGGAAAAGAGGACACCGC CGTCATTCAGTTTCATTCCTTTCAGGAGGCCGCGCTCCGCCGCTTTGGGG GCTTAGGGGTGATCAAAGAGGTAATGCATAGGTCATGGTTGGGCGTGGAG GGCTTTTGAGCGGCTCATCGGTGTTTGAAGTCGCACGTCCTCGCGTCCTG TGGTGACGAGGCAGGGACCTAAATCCCCGCACCCACGCCCCGATTTGCCA TGACCTTCTTGTGTTGATACCTCCCAACAATTTTTTTTGTCGTGCTTTGC CCCTGCCAACGGAGGAAGCTCTTAACGGTTGCTCCATCCCCCGACATGAA CTATACCAGGACAAGGCGGAAGACATCCACACGCTGGTGGAGAGCTTCAC AGCCCCCGCGCTTGCGGCCGCTCTGCGCGACCGAGAGACCGCCCTCCATA TGTGCGCCCATCTGCTGGAACAGGTGAGAGGTGCTGCCATAGGGGCAGAA AAGAAACACAGCGACTTTGATGCCCATGTTTTTTTTTTTTCCGAGCAAGC CGGCAGAAGGGAGAGCGACCCCTGGTTGGACAACAGTAGCAAACTGTGCC CCCTAGTTTCTGTCGCCGCCAGTCTCTCCAAGCCGCTCGTGTCACAAAAC ATGGGCGGTTCTGGCCTACACTCTATTTGTGTTTCTTGTGTGGGCAGGGA GATCTGTCCGGTGTCCGCAAGGTCCTCCTCCCCTTCACGGCGAAGCAGGT GGCGGAGAGCCGCCGGGCCTTGGGTCGGCTGGATCTCGAGCCCGAGGGCT TCACAAAGACCCACATGTACGCGCTCCGGAAGGTGCTCCAGCGGTTGCCG CGCCATGTCACCACGCTCACCGAGCAGAGGTATTTTATCTGTCTGCGCTG GACATAGCGGGTGGTACCGGGTATTGTAGAGCGGTGGCGATTCCGGTCAG GGTTAGATTGGTGTTGCGGGGTGGTGATTGGATGATGGCGGCAGTGGTGA TTGCGTGAATACGGAATGATGGCATGATTCGGGACGTTTTGGAGAACACG GAGAGGGTGCACATCGTGGTTTGACGGGTTCCGCCGGTGCTCCCACGGAA GTGTTTCCGCCCGTTCACGTCGTTTTGTTGGGGTCCCTCTTTGTCCTCGT CGGGTATGACGGCGCCGTCGATAGTTCGCATTGTCGGTCAGTGTGCGTGA TTTTCATCAACAAGCTAGTTTGTATTTTTTTTCTCGACCGCCCCTCCCCC TTTTACATCCGCTCCTCTTCTCTTTTCTTCAATCTCGCCCCTTACGCCCC CCTTCCCTTCCACCCACCTTTGCCCACTTCCTGGGCCAACTCGCCTCCCG TCCCCGACAGGGCTTCCGTGATGGTCCCGCTGTGCAACGTAGACGGGGTG GCGTCCGTGCTCTTCACGAAGCGCTCGGGTAACATGAGGGCCTACAAGAA CGACGTCTGCTTCCCCGGTGGCAAGGTGGGAAGGGGGTTTGTGGTTCGGG GCCTGGGCAGGGTGCCTTGTTTTGTGACGACGCTTCCGGATATGGCTACC CCCCATGCGCGGCCCGGAAATGAGGACAGCAGTCGAAGCAGCTCTTGCTG AGCGACGGAACGCATACGCCCGGAGATGACAATCAATGTGGCCGTGGTCG CTGGTCGCGAAATAATTTGTTTTTCTTGTGTACGCCACTCTTGGAATTCG ACGAACTCGTCCCGACGATGGCGGCCAGTGGAGTTCTGGCATGGCTATAG ATTGCGGTCACGAACGTGTCCAAGACGCGCAGCTTTGCAGCAATGCACCA ACAGCACACTCCCGTGCCGTGCTAGCTGGTGACAAAGTGGCGACACGCTT GGTTGTTCATGGAAAAGATAACGTGGTGACGCTGCCTAATTTGTTACGTC TGTGTGCGAAACCACGCCTGCCTGCGAAACCCTAGGTTGACATCGGCCAG GATCAACACATCATCCAAACGGCTGTGAGGGAGATGGGGGAGGAGATTGG CATTCTTGAGTCTTCGGTGAGACCTACTAAAGTTCCGGCATGCAGTACCA CCCCAAAATATTCATGCAATCAACGCGCCCCCCGAGGCAAAATAACTGCT GTGCTTGCCGAATAGGCTGGCGTGGGATGGTACTGTACGGTACGTCTTTC AAATGTGTAGTATACTCCGTCTCACACCGGTACATGGGGAAATTTGGAGG ATTAGGCGTTCGCCCAGAGGAGAAAGGCGTTTTTTTGTCGTTGTCCATGT GTCCATCTCTGAGTACTGCAGCATTTTTTCCGTGTCGGCACGACAGCTGA GCTACCGTCTGGCATTCGCAAATCGCCATCTCGTCACGCACGACACCTTG GGCTTGAAAAACACCTCGTGACATGCTATCCTCGAACTTGTCTCTATCAG GAGACACGCCGGCCAACATAGCTTACGAAAGCCGAAACGTTAGGTATGGC CAGCTTTGACTGCTTTTTACGCCTATTCAGTGCAAGGGTGCCTGCGAACT CTATTTTTTTCCAAAGGTTGACGTGCTCGGAGTCCTTCGCTGCGACTGGT CCGAGGTGGCTTCCCTGATCGGCGTCGCGGTCACCCCCGTGGTGGGCTTC TTGGGAAACCTTTCTCTGGAGCAGATCCACCCTAATCCCGACGAGGTAGG AGAGGGCGAACGAAGCCATTAGCGCCGCGGGCAGGGCTTCTGGTATATTT TTGTTCAGCAACCACCAATACTCTCGAGAGCAAAGTGCGGCTATCGATAC GGAGCATTGTTCCTTCCAGTGCGGCACGTTCGCAGACCCTCTAAATTGTT CGCTTCAGCGGGGAAAGTATCCAAGGTGCGATGTAAAATCGCGCTGTTGT TGTAATTCGTCGGGGATACACTGCGCGCGATTTTGACGGAGGAACGCGGC GTGCGCTTTCCCCGGTTGCCGTCTAGTTTGGTGGATCGTTGTTTTTGACC CGGGTGAACACGTTGGAGACCCAAACCCCGACGGGCTGATTGCGCGCCCT GCACCTCCCGCATACCTGTCGAATACTTGGCTTTGGCTTTTTCGTTGAAA GCATGCGGCACAAACAGGTTTGAGCGTTTTGCGGCGTGGGTACGGTGTGG CAAAGCCCTGTCTGCCTCGCAGCGGAGGCGTGGCGCGGGTGAAGCACACG GCCCATCGTGGGGTGTACCCTTTTCGCCCTCCTTCGTCCGCGCCGTAATT CGGTCAAGTTTCGAGCCTCGTGCACACAACTAGGCTACAAGACGTTCAAT TAGGACCATCCACCGCCTGCGTGCAACGATTTTTTGAAGAAACGAGTAAC GCGCCTACGATTCCATATTCTGCGGGCTGACACTGCTGCTGCCGCTGCCG CCGCCGCCGCCGCCGCTGCTGCTGCTACTACACCATACCGCCGTGTGTAT GTTGCAGGTTTCACATTGTTTTACGATTCCCGTTCGTTTCCTGCTGGAAG AGGACAGGTGAGAAACCATTTCGCACGAGCTTTTGTTTTTATTGTTACAA GATTGCACGTGTGTGCGTGCTTCCCAATATCTTGTTGCTGTTGTTGAAGG GTCCTCGTTTGTCTGCATCCGGGTGAGCGGCAGCCCCCCGTCGCGCGCCG AGCCAGAAATGGTGCCATCCGTGAAAGCGACTGGCTGTTGTACTACAGAG AGGCCGCCGGCGCCATTCTTACAGCATTCCAAACATTACTGCCGCACAGT TGTCTCGCAGTACCAGCGGTAGTGCTAGCGCCTGCAGCAGCGCTGACACC ATAGCTGGTGTTGTCGCAGCCGGTGCGACGCGTCGAGGAACAACAATTCG GCGACAGGTTAATAATATTTTGGGTCATTGTCGCCCCGATATCATTTTAT GCAAAACCTCTGGATGGCTAAGGTTGTGTTTTTTTCAGGTCCCTGTGCGA CGCTGTTCAGAAAGTGCTTGCTCGTGAGAATGCAGAGTCGAATTTGATTG TTGACTTGCTCGTGAGAATGCAGAGTCGAATTTGATTGTTGACTTGCTCG TGAGAATGCAGAGTCGAATTTGATTGTTGACTTGCTCGTGAGAACGCAGA GTCGAATTTGATTGTTGACGAAGCTAAGAGGGCCGGTGATCTCTTTTCGA GACTTTCTTTTTTTGCTGGGAGCGTAGAGAGATCCTTCTGTGCGGTCCCG GATCGTAGCTCCCCAGTAGCAAGGAAGGTGAGAATGTGCGCCTGCGGCCG AAAGGTGTTACGCACCCCGTTGAAGGTGGCTTCAACGACCAATCGGAGCA GCCACAGGCAGGCTTGTTGCTGTCTTGGACGTATACGCGCCCCACCTGCC GTCCGGCTTCCAAAACCTCAAAACGAATCTGTGTTTCGACCGAACCCGTG GCTTGATTTTGTGGCAGGTGGCAAGTGGACAAGTACGCGGCGCCCGCGTT TGTTGGCGGTCCGTACCAGATCTGGGGGCTGACGGGGTACATCTTGCGCC GCCTGGTCAACGACGTCTTACGCCAGCACCTGGCCGTCATGTAG
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12428:424..4917-

>mRNA_Ecto-sp13_S_contig12428.2017.1 ID=mRNA_Ecto-sp13_S_contig12428.2017.1|Name=mRNA_Ecto-sp13_S_contig12428.2017.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=918bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12428:424..4917- (Ectocarpus species13 EcNAP12_S_4_19m)
GAGCTCGAGTGGGCGGAAAGGGCGTCAGGCTCGGGAAAAGAGGACACCGC
CGTCATTCAGTTTCATTCCTTTCAGGAGGCCGCGCTCCGCCGCTTTGGGG
GCTTAGGGGTGATCAAAGAGGACAAGGCGGAAGACATCCACACGCTGGTG
GAGAGCTTCACAGCCCCCGCGCTTGCGGCCGCTCTGCGCGACCGAGAGAC
CGCCCTCCATATGTGCGCCCATCTGCTGGAACAGGGAGATCTGTCCGGTG
TCCGCAAGGTCCTCCTCCCCTTCACGGCGAAGCAGGTGGCGGAGAGCCGC
CGGGCCTTGGGTCGGCTGGATCTCGAGCCCGAGGGCTTCACAAAGACCCA
CATGTACGCGCTCCGGAAGGTGCTCCAGCGGTTGCCGCGCCATGTCACCA
CGCTCACCGAGCAGAGGGCTTCCGTGATGGTCCCGCTGTGCAACGTAGAC
GGGGTGGCGTCCGTGCTCTTCACGAAGCGCTCGGGTAACATGAGGGCCTA
CAAGAACGACGTCTGCTTCCCCGGTGGCAAGGTTGACATCGGCCAGGATC
AACACATCATCCAAACGGCTGTGAGGGAGATGGGGGAGGAGATTGGCATT
CTTGAGTCTTCGGTTGACGTGCTCGGAGTCCTTCGCTGCGACTGGTCCGA
GGTGGCTTCCCTGATCGGCGTCGCGGTCACCCCCGTGGTGGGCTTCTTGG
GAAACCTTTCTCTGGAGCAGATCCACCCTAATCCCGACGAGGTTTCACAT
TGTTTTACGATTCCCGTTCGTTTCCTGCTGGAAGAGGACAGGTGGCAAGT
GGACAAGTACGCGGCGCCCGCGTTTGTTGGCGGTCCGTACCAGATCTGGG
GGCTGACGGGGTACATCTTGCGCCGCCTGGTCAACGACGTCTTACGCCAG
CACCTGGCCGTCATGTAG
back to top