mRNA_Ecto-sp13_S_contig12427.2016.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig12427.2016.1 vs. uniprot
Match: A0A6H5K1P9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1P9_9PHAE) HSP 1 Score: 80.9 bits (198), Expect = 1.240e-16 Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = 1
Query: 22 MKLEAAAAVLGVAVDADPETLKAAYRRLALRWHPDKCKEA 141
MKLEAAAAVLGVAVDADPETLKAAYRRLALRWHPDKCKEA
Sbjct: 1 MKLEAAAAVLGVAVDADPETLKAAYRRLALRWHPDKCKEA 40
BLAST of mRNA_Ecto-sp13_S_contig12427.2016.1 vs. uniprot
Match: D8LMX5_ECTSI (Heat shock protein 40 like protein/ DnaJ domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMX5_ECTSI) HSP 1 Score: 80.9 bits (198), Expect = 1.240e-16 Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = 1
Query: 22 MKLEAAAAVLGVAVDADPETLKAAYRRLALRWHPDKCKEA 141
MKLEAAAAVLGVAVDADPETLKAAYRRLALRWHPDKCKEA
Sbjct: 1 MKLEAAAAVLGVAVDADPETLKAAYRRLALRWHPDKCKEA 40
BLAST of mRNA_Ecto-sp13_S_contig12427.2016.1 vs. uniprot
Match: F0Y9M6_AURAN (J domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9M6_AURAN) HSP 1 Score: 57.8 bits (138), Expect = 1.700e-8 Identity = 28/47 (59.57%), Postives = 36/47 (76.60%), Query Frame = 1
Query: 1 LPPLEKRMKLEAAAAVLGVAVDADPETLKAAYRRLALRWHPDKCKEA 141
+PPLE AAA+LGV VD +T++AAYRRLA++WHPDKCK+A
Sbjct: 155 VPPLEDA---HVAAALLGVRVDDGEQTIRAAYRRLAIKWHPDKCKDA 198
BLAST of mRNA_Ecto-sp13_S_contig12427.2016.1 vs. uniprot
Match: A0A7S1U9Q7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U9Q7_9STRA) HSP 1 Score: 55.1 bits (131), Expect = 6.620e-8 Identity = 25/37 (67.57%), Postives = 31/37 (83.78%), Query Frame = 1
Query: 22 MKLEAAAAVLGVAVDADPETLKAAYRRLALRWHPDKC 132
M++E AA +LGV + D +T+KAAYRRLALRWHPDKC
Sbjct: 4 MRIEDAARILGVEPNDDLDTIKAAYRRLALRWHPDKC 40
BLAST of mRNA_Ecto-sp13_S_contig12427.2016.1 vs. uniprot
Match: A0A7S1UKL2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UKL2_9STRA) HSP 1 Score: 47.8 bits (112), Expect = 1.470e-5 Identity = 21/32 (65.62%), Postives = 26/32 (81.25%), Query Frame = 1
Query: 43 AVLGVAVDADPETLKAAYRRLALRWHPDKCKE 138
A LGVA DAD T++ AYR++ALRWHPDK K+
Sbjct: 16 AALGVAPDADVSTMRKAYRKMALRWHPDKNKD 47
BLAST of mRNA_Ecto-sp13_S_contig12427.2016.1 vs. uniprot
Match: A0A2U8H523_9RHOO (Molecular chaperone DnaJ n=1 Tax=Azoarcus communis TaxID=41977 RepID=A0A2U8H523_9RHOO) HSP 1 Score: 49.3 bits (116), Expect = 1.660e-5 Identity = 23/36 (63.89%), Postives = 29/36 (80.56%), Query Frame = 1
Query: 22 MKLEAAAAVLGVAVDADPETLKAAYRRLALRWHPDK 129
+K AA VLGVA DADP ++K A+RRLA+RWHPD+
Sbjct: 2 LKDVAAHDVLGVAADADPASIKKAFRRLAMRWHPDR 37
BLAST of mRNA_Ecto-sp13_S_contig12427.2016.1 vs. uniprot
Match: A0A7S3NIB2_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NIB2_9STRA) HSP 1 Score: 48.9 bits (115), Expect = 2.300e-5 Identity = 22/39 (56.41%), Postives = 32/39 (82.05%), Query Frame = 1
Query: 22 MKLEAAAAVLGVAVDADPETLKAAYRRLALRWHPDKCKE 138
MKL+ AA+VLGV + ++++AAYRRLA++WHPDK K+
Sbjct: 1 MKLKRAASVLGVNTEDGEQSIRAAYRRLAIKWHPDKNKD 39
BLAST of mRNA_Ecto-sp13_S_contig12427.2016.1 vs. uniprot
Match: A0A1X0QVM7_RHIZD (DnaJ-domain-containing protein n=1 Tax=Rhizopus microsporus var. microsporus TaxID=86635 RepID=A0A1X0QVM7_RHIZD) HSP 1 Score: 48.5 bits (114), Expect = 2.990e-5 Identity = 21/32 (65.62%), Postives = 27/32 (84.38%), Query Frame = 1
Query: 43 AVLGVAVDADPETLKAAYRRLALRWHPDKCKE 138
A+LGV DAD ET+K AYR+LAL+WHPD+ K+
Sbjct: 7 AILGVPRDADDETIKKAYRKLALKWHPDRNKD 38
BLAST of mRNA_Ecto-sp13_S_contig12427.2016.1 vs. uniprot
Match: A0A7S0E6R0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0E6R0_9EUKA) HSP 1 Score: 46.6 bits (109), Expect = 3.110e-5 Identity = 20/32 (62.50%), Postives = 27/32 (84.38%), Query Frame = 1
Query: 46 VLGVAVDADPETLKAAYRRLALRWHPDKCKEA 141
VLGVA DAD + +K AYR+LA+RWHPDK +++
Sbjct: 33 VLGVARDADEQQIKRAYRKLAVRWHPDKNRDS 64
BLAST of mRNA_Ecto-sp13_S_contig12427.2016.1 vs. uniprot
Match: A0A7V1R1K6_9BACT (Chaperone protein DnaJ n=2 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A7V1R1K6_9BACT) HSP 1 Score: 48.5 bits (114), Expect = 3.130e-5 Identity = 21/29 (72.41%), Postives = 27/29 (93.10%), Query Frame = 1
Query: 43 AVLGVAVDADPETLKAAYRRLALRWHPDK 129
A+LGV+ DADPET+K AYRRLA+++HPDK
Sbjct: 7 AILGVSRDADPETIKRAYRRLAVQYHPDK 35 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12427.2016.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig12427.2016.1 >prot_Ecto-sp13_S_contig12427.2016.1 ID=prot_Ecto-sp13_S_contig12427.2016.1|Name=mRNA_Ecto-sp13_S_contig12427.2016.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=40bp MKLEAAAAVLGVAVDADPETLKAAYRRLALRWHPDKCKEAback to top mRNA from alignment at Ecto-sp13_S_contig12427:4599..4739+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig12427.2016.1 ID=mRNA_Ecto-sp13_S_contig12427.2016.1|Name=mRNA_Ecto-sp13_S_contig12427.2016.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=141bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12427:4599..4739+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12427:4599..4739+ >mRNA_Ecto-sp13_S_contig12427.2016.1 ID=mRNA_Ecto-sp13_S_contig12427.2016.1|Name=mRNA_Ecto-sp13_S_contig12427.2016.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=120bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12427:4599..4739+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |