prot_Ecto-sp13_S_contig86958.20155.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig86958.20155.1
Unique Nameprot_Ecto-sp13_S_contig86958.20155.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length51
Homology
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BLAST of mRNA_Ecto-sp13_S_contig86958.20155.1 vs. uniprot
Match: A0A6H5K2J5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2J5_9PHAE)

HSP 1 Score: 92.0 bits (227), Expect = 3.150e-21
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0 
Query:    1 KAYLTNPTVSRSAKVEMVDKAFDAKSKTSSVTKNLLLAMAGNARLADAEKV 51
            KAYLTNPTVSRSAKVEMVDKAFDAKSKTSSVTKNLLLAMAGNARLADAEKV
Sbjct:  152 KAYLTNPTVSRSAKVEMVDKAFDAKSKTSSVTKNLLLAMAGNARLADAEKV 202
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BLAST of mRNA_Ecto-sp13_S_contig86958.20155.1 vs. uniprot
Match: D7FJT6_ECTSI (ATP synthase O subunit, mitochondrial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJT6_ECTSI)

HSP 1 Score: 92.0 bits (227), Expect = 3.960e-21
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0 
Query:    1 KAYLTNPTVSRSAKVEMVDKAFDAKSKTSSVTKNLLLAMAGNARLADAEKV 51
            KAYLTNPTVSRSAKVEMVDKAFDAKSKTSSVTKNLLLAMAGNARLADAEKV
Sbjct:  168 KAYLTNPTVSRSAKVEMVDKAFDAKSKTSSVTKNLLLAMAGNARLADAEKV 218
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BLAST of mRNA_Ecto-sp13_S_contig86958.20155.1 vs. uniprot
Match: A0A7S4D8J3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D8J3_HETAK)

HSP 1 Score: 51.6 bits (122), Expect = 2.560e-6
Identity = 33/50 (66.00%), Postives = 36/50 (72.00%), Query Frame = 0 
Query:    2 AYLTNPTVSRSAKVEMVDKAFDAKSKTSSVTKNLLLAMAGNARLADAEKV 51
            AYL NPTVSR AKV  VDK F A S  SS+T+NLL AMA NARL +  KV
Sbjct:  118 AYLRNPTVSREAKVGAVDKLF-AGSSVSSLTQNLLSAMASNARLGETGKV 166
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig86958.20155.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K2J5_9PHAE3.150e-21100.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJT6_ECTSI3.960e-21100.00ATP synthase O subunit, mitochondrial n=1 Tax=Ecto... [more]
A0A7S4D8J3_HETAK2.560e-666.00Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026015F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamilyGENE3D1.10.520.20coord: 1..51
e-value: 4.0E-8
score: 35.9
IPR026015F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamilySUPERFAMILY47928N-terminal domain of the delta subunit of the F1F0-ATP synthasecoord: 2..47
IPR000711ATPase, OSCP/delta subunitPFAMPF00213OSCPcoord: 2..49
e-value: 2.6E-5
score: 24.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig86958contigEcto-sp13_S_contig86958:3..155 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig86958.20155.1mRNA_Ecto-sp13_S_contig86958.20155.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig86958 3..155 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig86958.20155.1 ID=prot_Ecto-sp13_S_contig86958.20155.1|Name=mRNA_Ecto-sp13_S_contig86958.20155.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=51bp
KAYLTNPTVSRSAKVEMVDKAFDAKSKTSSVTKNLLLAMAGNARLADAEK
V
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026015ATP_synth_OSCP/delta_N_sf
IPR000711ATPase_OSCP/dsu