prot_Ecto-sp13_S_contig86918.20152.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig86918.20152.1
Unique Nameprot_Ecto-sp13_S_contig86918.20152.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length62
Homology
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BLAST of mRNA_Ecto-sp13_S_contig86918.20152.1 vs. uniprot
Match: A0A6H5K9M8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9M8_9PHAE)

HSP 1 Score: 126 bits (317), Expect = 1.960e-32
Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = 0 
Query:    1 MAEYYEALVLFDYQPGSIDELRLFEGELVEVRVGGEGVGEEEGWLYGSDQRGRHGTFPANYV 62
            MAEYYEALVLFDYQP SIDELRLFEGELVEVRVGGEGVGEEEGWLYGSDQRGRHGTFPANYV
Sbjct:    1 MAEYYEALVLFDYQPVSIDELRLFEGELVEVRVGGEGVGEEEGWLYGSDQRGRHGTFPANYV 62
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BLAST of mRNA_Ecto-sp13_S_contig86918.20152.1 vs. uniprot
Match: D7G7A1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7A1_ECTSI)

HSP 1 Score: 126 bits (317), Expect = 1.960e-32
Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = 0 
Query:    1 MAEYYEALVLFDYQPGSIDELRLFEGELVEVRVGGEGVGEEEGWLYGSDQRGRHGTFPANYV 62
            MAEYYEALVLFDYQP SIDELRLFEGELVEVRVGGEGVGEEEGWLYGSDQRGRHGTFPANYV
Sbjct:    1 MAEYYEALVLFDYQPVSIDELRLFEGELVEVRVGGEGVGEEEGWLYGSDQRGRHGTFPANYV 62
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BLAST of mRNA_Ecto-sp13_S_contig86918.20152.1 vs. uniprot
Match: A0A8J4PKM4_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PKM4_9MYCE)

HSP 1 Score: 50.1 bits (118), Expect = 1.700e-5
Identity = 24/54 (44.44%), Postives = 33/54 (61.11%), Query Frame = 0 
Query:    9 VLFDYQPGSIDELRLFEGELVEVRVGGEGVGEEEGWLYGSDQRGRHGTFPANYV 62
            VL+DYQ     EL + EGEL+ +        E+EGW +GS+ +G  G FP+NYV
Sbjct:  449 VLYDYQSECEGELEIKEGELLVIEY------EDEGWFFGSNDKGASGRFPSNYV 496
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BLAST of mRNA_Ecto-sp13_S_contig86918.20152.1 vs. uniprot
Match: UPI0006450F44 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006450F44)

HSP 1 Score: 49.3 bits (116), Expect = 3.190e-5
Identity = 22/54 (40.74%), Postives = 33/54 (61.11%), Query Frame = 0 
Query:    9 VLFDYQPGSIDELRLFEGELVEVRVGGEGVGEEEGWLYGSDQRGRHGTFPANYV 62
            VL+ Y P    E+ +FEGE + ++       E+EGW +G+ +RG  G FP+NYV
Sbjct:  458 VLYTYHPDGEGEIDIFEGEQLTIQY------EDEGWFFGTSERGVSGRFPSNYV 505
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BLAST of mRNA_Ecto-sp13_S_contig86918.20152.1 vs. uniprot
Match: D3BIJ4_POLPP (SH3 domain-containing protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BIJ4_POLPP)

HSP 1 Score: 48.9 bits (115), Expect = 4.360e-5
Identity = 23/54 (42.59%), Postives = 32/54 (59.26%), Query Frame = 0 
Query:    9 VLFDYQPGSIDELRLFEGELVEVRVGGEGVGEEEGWLYGSDQRGRHGTFPANYV 62
            VL+DY      EL + EGE + +        E+EGW YGS+++G  G FP+NYV
Sbjct:  447 VLYDYHSDCEGELEIREGETLTIEY------EDEGWFYGSNEKGSAGRFPSNYV 494
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig86918.20152.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5K9M8_9PHAE1.960e-3298.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G7A1_ECTSI1.960e-3298.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A8J4PKM4_9MYCE1.700e-544.44Uncharacterized protein n=1 Tax=Polysphondylium vi... [more]
UPI0006450F443.190e-540.74hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
D3BIJ4_POLPP4.360e-542.59SH3 domain-containing protein n=1 Tax=Polysphondyl... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001452SH3 domainPRINTSPR00452SH3DOMAINcoord: 5..15
score: 25.86
coord: 41..50
score: 26.81
coord: 53..62
score: 40.41
coord: 19..34
score: 26.97
IPR001452SH3 domainSMARTSM00326SH3_2coord: 5..62
e-value: 1.6E-4
score: 31.0
IPR001452SH3 domainPFAMPF14604SH3_9coord: 9..62
e-value: 2.6E-16
score: 59.2
IPR001452SH3 domainPROSITEPS50002SH3coord: 2..62
score: 20.121
NoneNo IPR availableGENE3D2.30.30.40coord: 4..62
e-value: 4.7E-13
score: 50.5
IPR036028SH3-like domain superfamilySUPERFAMILY50044SH3-domaincoord: 4..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig86918contigEcto-sp13_S_contig86918:34..219 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig86918.20152.1mRNA_Ecto-sp13_S_contig86918.20152.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig86918 34..219 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig86918.20152.1 ID=prot_Ecto-sp13_S_contig86918.20152.1|Name=mRNA_Ecto-sp13_S_contig86918.20152.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=62bp
MAEYYEALVLFDYQPGSIDELRLFEGELVEVRVGGEGVGEEEGWLYGSDQ
RGRHGTFPANYV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001452SH3_domain
IPR036028SH3-like_dom_sf