prot_Ecto-sp13_S_contig869.20149.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig869.20149.1
Unique Nameprot_Ecto-sp13_S_contig869.20149.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length460
Homology
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BLAST of mRNA_Ecto-sp13_S_contig869.20149.1 vs. uniprot
Match: A0A6H5KC47_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KC47_9PHAE)

HSP 1 Score: 771 bits (1992), Expect = 3.740e-278
Identity = 439/533 (82.36%), Postives = 446/533 (83.68%), Query Frame = 0 
Query:    1 MTDRMEGQSLNVIAALALANETALENRDRFAYFRKWSDEYAGVWTAGVQGLVAAVGISGALGLLGVAAGLSKGKACSPCINLLRLTCAVTFTTTWAAFILSSLVIVGTVTWSDGCHFLNLAATRGWETVGVDGLSAAVLDGCLRGNAVTEEFNITDALGFFESYPGTAEEVGALNATFAEADVEATIYAISDFVYSLNATAVAISLLDFYTNAEVNGSLLLEPDCPYN--------------------------------------------------------------------AGGTRQN------ETALDYMSRVFNSSDCSSINGDLLSAWDLAARERAYRDQMQDDLTCITTSSNVECSNSXXXXXXXXXXXXXXXXXTFSLSPCSCTSDGYIGAPDTLLAYFRAFADNVTALRADLAGLLTPPLEAETAAFSGQGALANASSDSWAARCASRCSFVDSHYRNFEGAMCGTALGGLAQVGFSMFMIGVGGLALAVTSGIMVHRLKEVWAKSMTKVLSTEEDIVMEEY 459
            MTDRM+GQSLNVIAALALANETALENRDRFAYFR+WSDEYAGV TAGVQGLVAAVGISGA+GLLGVAAGL+KGKACSPCINLLRLTCAVTFTTTWA+FILSSLVIVG VTWSDGC FLNLAATRGWETVGVDGLSAAVLDGCLRGNAVTEEFNITDALGFFESYPGTAEEVGALNATFAE DVE TIYAISDFVYSLNATA A+SLLDFYTNAEVNGSLLLEPDCPYN                                                                    AGGTRQ+      ETALDYMSRVFNSSDCSSINGDLLSAWDLAARERAYRDQMQDDLTC TTSSNVEC   XXXXXXXXXXXXXXXX  FSLSPCSCTSDGY GAPDTLLAYFRAFADNVTALRADLAGLLTPPLEAETAAFSGQGALANASSDSWAARCASRCSFVDSHYRNFEGAMCGTALGGLAQVGFSMFMIGVGGLALAVTSGIMVHRLKEVWAKSMTKVLSTEEDIVMEEY
Sbjct:    1 MTDRMKGQSLNVIAALALANETALENRDRFAYFRRWSDEYAGVRTAGVQGLVAAVGISGAVGLLGVAAGLAKGKACSPCINLLRLTCAVTFTTTWASFILSSLVIVGAVTWSDGCQFLNLAATRGWETVGVDGLSAAVLDGCLRGNAVTEEFNITDALGFFESYPGTAEEVGALNATFAETDVETTIYAISDFVYSLNATAGAVSLLDFYTNAEVNGSLLLEPDCPYNVTFEGEEATAYLGRPWLALPTVSTAAETVTTGATTSDGEDGGGVGNSSSSYDSAGNLTTVDASLTPWQAGGTRQSFGRQGDETALDYMSRVFNSSDCSSINGDLLSAWDLAARERAYRDQMQDDLTCTTTSSNVECXXXXXXXXXXXXXXXXXXX--FSLSPCSCTSDGYTGAPDTLLAYFRAFADNVTALRADLAGLLTPPLEAETAAFSGQGALANASSDSWAARCASRCSFVDSHYRNFEGAMCGTALGGLAQVGFSMFMIGVGGLALAVTSGIMVHRLKEVWAKSMTKVLSTEEDIVMEEY 531
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig869.20149.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KC47_9PHAE3.740e-27882.36Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 82..111
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 112..410
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 71..81
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 434..459
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 47..70
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..46
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 411..433
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..18
NoneNo IPR availableTMHMMTMhelixcoord: 89..111
NoneNo IPR availableTMHMMTMhelixcoord: 411..433
NoneNo IPR availableTMHMMTMhelixcoord: 46..68

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig869contigEcto-sp13_S_contig869:9673..13259 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig869.20149.1mRNA_Ecto-sp13_S_contig869.20149.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig869 9658..13259 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig869.20149.1 ID=prot_Ecto-sp13_S_contig869.20149.1|Name=mRNA_Ecto-sp13_S_contig869.20149.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=460bp
MTDRMEGQSLNVIAALALANETALENRDRFAYFRKWSDEYAGVWTAGVQG
LVAAVGISGALGLLGVAAGLSKGKACSPCINLLRLTCAVTFTTTWAAFIL
SSLVIVGTVTWSDGCHFLNLAATRGWETVGVDGLSAAVLDGCLRGNAVTE
EFNITDALGFFESYPGTAEEVGALNATFAEADVEATIYAISDFVYSLNAT
AVAISLLDFYTNAEVNGSLLLEPDCPYNAGGTRQNETALDYMSRVFNSSD
CSSINGDLLSAWDLAARERAYRDQMQDDLTCITTSSNVECSNSSSSSSPS
LLSSSSSSSSTFSLSPCSCTSDGYIGAPDTLLAYFRAFADNVTALRADLA
GLLTPPLEAETAAFSGQGALANASSDSWAARCASRCSFVDSHYRNFEGAM
CGTALGGLAQVGFSMFMIGVGGLALAVTSGIMVHRLKEVWAKSMTKVLST
EEDIVMEEY*
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