prot_Ecto-sp13_S_contig8689.20146.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8689.20146.1
Unique Nameprot_Ecto-sp13_S_contig8689.20146.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length71
Homology
BLAST of mRNA_Ecto-sp13_S_contig8689.20146.1 vs. uniprot
Match: J4I8P8_9APHY (Eukaryotic translation initiation factor 3 subunit G n=1 Tax=Fibroporia radiculosa TaxID=599839 RepID=J4I8P8_9APHY)

HSP 1 Score: 65.9 bits (159), Expect = 4.400e-11
Identity = 35/64 (54.69%), Postives = 41/64 (64.06%), Query Frame = 0
Query:    7 GAGKYVPPSRKVGFSGRGESGPEGAANPMAMGEDHTKIRVTNISEDTTEGDLRDLFSAFGRINR 70
            G GKYVPPS + G  G GE+     + P    +D   +RVTNISEDT E DLRDLF AFGR+ R
Sbjct:  177 GTGKYVPPSMRSGGRGPGEA----MSRPGGSRDDLPTLRVTNISEDTQENDLRDLFGAFGRVAR 236          
BLAST of mRNA_Ecto-sp13_S_contig8689.20146.1 vs. uniprot
Match: A0A5M3MFN3_CONPW (Eukaryotic translation initiation factor 3 subunit G n=1 Tax=Coniophora puteana (strain RWD-64-598) TaxID=741705 RepID=A0A5M3MFN3_CONPW)

HSP 1 Score: 65.9 bits (159), Expect = 4.630e-11
Identity = 38/72 (52.78%), Postives = 43/72 (59.72%), Query Frame = 0
Query:    2 GLGVGGA---GKYVPPSRKVGFSGRGESGPEGAANPMAMGEDHTKIRVTNISEDTTEGDLRDLFSAFGRINR 70
            G G GG+   GKYVPPS + G  G GE     A      G+D   +RVTNISEDT E DLRDLF  FGR+ R
Sbjct:  177 GAGAGGSTIGGKYVPPSMRAGARGAGE-----AMGRPGRGDDLPTLRVTNISEDTQENDLRDLFGRFGRVAR 243          
BLAST of mRNA_Ecto-sp13_S_contig8689.20146.1 vs. uniprot
Match: UPI000440D94D (translation initiation factor 3 RNA-binding subunit n=1 Tax=Stereum hirsutum (strain FP-91666) TaxID=721885 RepID=UPI000440D94D)

HSP 1 Score: 65.5 bits (158), Expect = 6.400e-11
Identity = 38/68 (55.88%), Postives = 42/68 (61.76%), Query Frame = 0
Query:    5 VGGAGKYVPPSRKVGFSGRGES--GPEGAANPMAMGEDHTKIRVTNISEDTTEGDLRDLFSAFGRINR 70
             GG  KYVPPS + G  G GES   P GA N     +D   +RVTNISEDT E DLRDLF  FGR+ R
Sbjct:  181 AGGPSKYVPPSMRAGARGPGESMGRPGGAGNR----DDLPTLRVTNISEDTQENDLRDLFGTFGRVAR 244          
BLAST of mRNA_Ecto-sp13_S_contig8689.20146.1 vs. uniprot
Match: K5VZ60_PHACS (Eukaryotic translation initiation factor 3 subunit G n=1 Tax=Phanerochaete carnosa (strain HHB-10118-sp) TaxID=650164 RepID=K5VZ60_PHACS)

HSP 1 Score: 65.1 bits (157), Expect = 8.270e-11
Identity = 35/62 (56.45%), Postives = 39/62 (62.90%), Query Frame = 0
Query:    9 GKYVPPSRKVGFSGRGESGPEGAANPMAMGEDHTKIRVTNISEDTTEGDLRDLFSAFGRINR 70
            GKYVPPS + G  G GES       P    +D   +RVTNISEDT E DLRDLF AFGR+ R
Sbjct:  176 GKYVPPSMRNGARGPGES----MGRPGGSRDDLPTLRVTNISEDTQENDLRDLFGAFGRVAR 233          
BLAST of mRNA_Ecto-sp13_S_contig8689.20146.1 vs. uniprot
Match: A0A0D2MDH3_HYPSF (Eukaryotic translation initiation factor 3 subunit G n=1 Tax=Hypholoma sublateritium (strain FD-334 SS-4) TaxID=945553 RepID=A0A0D2MDH3_HYPSF)

HSP 1 Score: 65.1 bits (157), Expect = 8.650e-11
Identity = 38/64 (59.38%), Postives = 42/64 (65.62%), Query Frame = 0
Query:    9 GKYVPPSRKVGFSGRGES--GPEGAANPMAMGEDHTKIRVTNISEDTTEGDLRDLFSAFGRINR 70
            GKYVPPS + G  G GES  G  GAAN     +D   +RVTNISEDT E DLRDLF  FGR+ R
Sbjct:  180 GKYVPPSMRSGARGAGESMRGLGGAANR----DDLPTLRVTNISEDTQENDLRDLFGVFGRVAR 239          
BLAST of mRNA_Ecto-sp13_S_contig8689.20146.1 vs. uniprot
Match: UPI00129EA836 (eukaryotic translation initiation factor 3 subunit G n=1 Tax=Phasianus colchicus TaxID=9054 RepID=UPI00129EA836)

HSP 1 Score: 61.6 bits (148), Expect = 1.340e-10
Identity = 33/62 (53.23%), Postives = 40/62 (64.52%), Query Frame = 0
Query:    9 GKYVPPSRKVGFSGRGESGPEGAANPMAMGEDHTKIRVTNISEDTTEGDLRDLFSAFGRINR 70
            GKYVPPS + G S RGES       P    +D+  IRVTN+SEDT E DL++LF  FG I+R
Sbjct:   36 GKYVPPSLRDGASRRGES-----MQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISR 92          
BLAST of mRNA_Ecto-sp13_S_contig8689.20146.1 vs. uniprot
Match: A0A165GIT6_9APHY (Eukaryotic translation initiation factor 3 subunit G n=1 Tax=Laetiporus sulphureus 93-53 TaxID=1314785 RepID=A0A165GIT6_9APHY)

HSP 1 Score: 64.3 bits (155), Expect = 1.640e-10
Identity = 34/65 (52.31%), Postives = 41/65 (63.08%), Query Frame = 0
Query:    6 GGAGKYVPPSRKVGFSGRGESGPEGAANPMAMGEDHTKIRVTNISEDTTEGDLRDLFSAFGRINR 70
            GG GKY+PP  + G  G GES     + P    +D   +RVTNISEDT E DLRDLF +FGR+ R
Sbjct:  179 GGTGKYIPPWMRGGARGPGES----MSRPGGSRDDLPTLRVTNISEDTQENDLRDLFGSFGRVAR 239          
BLAST of mRNA_Ecto-sp13_S_contig8689.20146.1 vs. uniprot
Match: A0A401GZS0_9APHY (Eukaryotic translation initiation factor 3 subunit G n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GZS0_9APHY)

HSP 1 Score: 63.9 bits (154), Expect = 2.250e-10
Identity = 33/62 (53.23%), Postives = 39/62 (62.90%), Query Frame = 0
Query:    9 GKYVPPSRKVGFSGRGESGPEGAANPMAMGEDHTKIRVTNISEDTTEGDLRDLFSAFGRINR 70
            GKYVPPS + G  G GES     + P    +D   +R+TNISEDT E DLRDLF  FGR+ R
Sbjct:  180 GKYVPPSMRPGGRGAGES----MSRPGGSRDDLPTLRITNISEDTQENDLRDLFGTFGRVAR 237          
BLAST of mRNA_Ecto-sp13_S_contig8689.20146.1 vs. uniprot
Match: A0A2H6NAX7_MICLE (RRM domain-containing protein (Fragment) n=3 Tax=Sauria TaxID=32561 RepID=A0A2H6NAX7_MICLE)

HSP 1 Score: 61.6 bits (148), Expect = 2.570e-10
Identity = 33/62 (53.23%), Postives = 40/62 (64.52%), Query Frame = 0
Query:    9 GKYVPPSRKVGFSGRGESGPEGAANPMAMGEDHTKIRVTNISEDTTEGDLRDLFSAFGRINR 70
            GKYVPPS + G S RGES       P    +D+  IRVTN+SEDT E DL++LF  FG I+R
Sbjct:   34 GKYVPPSLRDGASRRGES-----MQPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISR 90          
BLAST of mRNA_Ecto-sp13_S_contig8689.20146.1 vs. uniprot
Match: A0A316ZBI4_9BASI (eIF-3 RNA-binding subunit (Fragment) n=1 Tax=Tilletiopsis washingtonensis TaxID=58919 RepID=A0A316ZBI4_9BASI)

HSP 1 Score: 63.9 bits (154), Expect = 2.600e-10
Identity = 35/67 (52.24%), Postives = 40/67 (59.70%), Query Frame = 0
Query:    6 GGAGKYVPPSRKVGFSGRGE--SGPEGAANPMAMGEDHTKIRVTNISEDTTEGDLRDLFSAFGRINR 70
            G  GKYVPPS + G  G GE   GP G  N   M      +RVTN+SED  E DLRD+FS FGR+ R
Sbjct:  201 GAGGKYVPPSMRAGAKGAGERMGGPAGGMNRDEM----PTLRVTNLSEDAEEDDLRDIFSRFGRVTR 263          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8689.20146.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
J4I8P8_9APHY4.400e-1154.69Eukaryotic translation initiation factor 3 subunit... [more]
A0A5M3MFN3_CONPW4.630e-1152.78Eukaryotic translation initiation factor 3 subunit... [more]
UPI000440D94D6.400e-1155.88translation initiation factor 3 RNA-binding subuni... [more]
K5VZ60_PHACS8.270e-1156.45Eukaryotic translation initiation factor 3 subunit... [more]
A0A0D2MDH3_HYPSF8.650e-1159.38Eukaryotic translation initiation factor 3 subunit... [more]
UPI00129EA8361.340e-1053.23eukaryotic translation initiation factor 3 subunit... [more]
A0A165GIT6_9APHY1.640e-1052.31Eukaryotic translation initiation factor 3 subunit... [more]
A0A401GZS0_9APHY2.250e-1053.23Eukaryotic translation initiation factor 3 subunit... [more]
A0A2H6NAX7_MICLE2.570e-1053.23RRM domain-containing protein (Fragment) n=3 Tax=S... [more]
A0A316ZBI4_9BASI2.600e-1052.24eIF-3 RNA-binding subunit (Fragment) n=1 Tax=Tille... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 44..69
e-value: 1.3E-5
score: 24.9
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 20..70
e-value: 5.7E-7
score: 31.5
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 18..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8689contigEcto-sp13_S_contig8689:6400..6612 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8689.20146.1mRNA_Ecto-sp13_S_contig8689.20146.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8689 6400..6612 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8689.20146.1 ID=prot_Ecto-sp13_S_contig8689.20146.1|Name=mRNA_Ecto-sp13_S_contig8689.20146.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=71bp
MGLGVGGAGKYVPPSRKVGFSGRGESGPEGAANPMAMGEDHTKIRVTNIS
EDTTEGDLRDLFSAFGRINR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf