mRNA_Ecto-sp13_S_contig8683.20138.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8683.20138.1 vs. uniprot
Match: D8LLS6_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLS6_ECTSI) HSP 1 Score: 652 bits (1683), Expect = 4.800e-225 Identity = 466/598 (77.93%), Postives = 474/598 (79.26%), Query Frame = 1
Query: 73 MDDELASSEADCLSCRYSYSTEFYNLKARDGACIDNSQYSILAGVCFTIPFAIATLFAGRLTDTLNRRLLHTGAILVWSLAAAAHGVCEDFSCLMVSQIVLGIGEAFNAPACYAMITLYFPHSKRATANGIYSSGTYLGSAMSSLCLALAVLLGWRNTAFLAGAFGVLAGAVLFFTVEHNPVMPPSNDGYTKLPDDDDDVGDGLAEEPXXXXXXXXSHETCTKLEPLLPSAAMAGVGHRKVVSFGDSNGNGGGAGGARASYGGCVGGETRAADPAVGNDNDRQELATAAAEAGRRESWXXXXXXXXXXXXXXXXXXXXXXXXXXXPASAGGAVGSSGSGGDIAPARWVAPG--------------ESPIRAAGGGRRTIRANVSGRNPFAKSGNPFAVSPSAAEGQWRGGGAGRWVDGDGAAGCEEDRGARGGRGRGNGIGRGGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKDPNNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG-----------------LGKHDLGQALRMIVSNRVVLVLFAASSARMIGTWASAGYMAV 1773
MDDELASSEADCLSCRYSYSTEFYNLK DGACIDNSQYSILAGVCFTIPFAIATLFAGRLTDTLNRRLLHTGAILVWSLAAAAHGVCEDFSCLMVSQIVLG+GEAFNAPACYAMITLYFPHSKRATANGIYS+GTYLGSAMSSLCLALAVLLGWRNTAFLAGAFGVLAGAVLFFTVEHNPVMPPSNDGYTKLPD XXXXXXXXSHE CTKLEPL PSAAMAGVGHRKVVSF DSNGNGGGAGGARA YGGCVGGETR ADPAV N +DRQELA AAEAGRRES XXXXXXXXXXXXXXXXXXXXXXX S GG VGSSGSGGDIAPARW APG E PI+AAGGGRRT RA+VSGRNPFAKSGNPFAVSPSAAEGQ RG GAGRWVD DGAAGCEEDRG RGGRGR XXXXXXXXXXXX S P ++ XXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXX G LGKHDLG+ALRMIVSNRVVLVLFAASSARMIGTWASAGYMAV
Sbjct: 1 MDDELASSEADCLSCRYSYSTEFYNLK--DGACIDNSQYSILAGVCFTIPFAIATLFAGRLTDTLNRRLLHTGAILVWSLAAAAHGVCEDFSCLMVSQIVLGMGEAFNAPACYAMITLYFPHSKRATANGIYSTGTYLGSAMSSLCLALAVLLGWRNTAFLAGAFGVLAGAVLFFTVEHNPVMPPSNDGYTKLPDXXXXXXXXXXXX-XXXXXXXXSHEKCTKLEPLPPSAAMAGVGHRKVVSFADSNGNGGGAGGARALYGGCVGGETRTADPAVSNGDDRQELA--AAEAGRRESXXXXXXXXXXXXXXXXXXXXXXXX------SRGGTVGSSGSGGDIAPARWAAPGAXXXAPPARFLAPLEPPIQAAGGGRRTTRADVSGRNPFAKSGNPFAVSPSAAEGQGRGCGAGRWVDDDGAAGCEEDRGTRGGRGR------------------RXXXXXXXXXXXXDQPIAAGGAGASDAPYSAALVXXXXXXXXXXXXXXXXXYDEXXXXXXXXXXXXXXXXPAGGAGRWKDVEDSGPRRGXXXXXXXXXXXXXLGKHDLGEALRMIVSNRVVLVLFAASSARMIGTWASAGYMAV 569
BLAST of mRNA_Ecto-sp13_S_contig8683.20138.1 vs. uniprot
Match: A0A6H5KX10_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX10_9PHAE) HSP 1 Score: 576 bits (1485), Expect = 5.460e-194 Identity = 407/551 (73.87%), Postives = 419/551 (76.04%), Query Frame = 1
Query: 160 DGACIDNSQYSILAGVCFTIPFAIATLFAGRLTDTLNRRLLHTGAILVWSLAAAAHGVCEDFSCLMVSQIVLGIGEAFNAPACYAMITLYFPHSKRATANGIYSSGTYLGSAMSSLCLALAVLLGWRNTAFLAGAFGVLAGAVLFFTVEHNPVMPPSNDGYTKLPDDDDDVGDGLAEEPXXXXXXXXSHETCTKLEPLLPSAAMAGVGHRKVVSFGDSNGNGGGAGGARASYGGCVGGETRAADPAVGNDNDRQELATAAAEAGRRESWXXXXXXXXXXXXXXXXXXXXXXXXXXXPASAGGAVGSSGSGGDIAPARWVAPGESPIRAAGGGRRTIRANVSGRNPFAKSGNPFAVSPSAAEGQWRGGGAGRWVDGDGAAGCEEDRGARGGRGRGNGIGRGGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKDPNNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG-------------LGKHDLGQALRMIVSNRVVLVLFAASSARMIGTWASAGYMAV 1773
DGACIDNSQYSILAGVCFTIPFAIATLFAGRLTDTLNRRLLHTGAILVWSLAAAAHGVCEDFSCLMVSQIVLG+G+AFNAPACYAMITLYFPHSKRATANGIYSSGTYLGSA+SSLCLALAVLLGWRNTAFLAGA GVLA AVLFFTVEHNPVMPPS DGYTKLPD XXXXXXXXSHE CTKLEPL PSAAM+GVGHRKVVSF +SN NGG AGGAR Y ETRA+DPAV N +DRQ+LA XXXXXXXXXXXXXXXXXXXXXXXXXXX AVGSSGSGGDIAPARW APGE PI+AA GG+RT RA+VSGRNPFAKSGNPFAVSPSAA+GQ RGGGAGRWVDGDGAAGCEEDRGARGGRGR N GRG XXX XXXXX KD NN XXXXX X XXXXXXXXXXXXXXXX G LGKHDLGQALRMIVSNRVVLVLFAASS RMIGTWASAGYMAV
Sbjct: 6 DGACIDNSQYSILAGVCFTIPFAIATLFAGRLTDTLNRRLLHTGAILVWSLAAAAHGVCEDFSCLMVSQIVLGMGQAFNAPACYAMITLYFPHSKRATANGIYSSGTYLGSAISSLCLALAVLLGWRNTAFLAGASGVLAAAVLFFTVEHNPVMPPSEDGYTKLPDXXXXXXXXXXXXXXXXXXXXXSHEKCTKLEPLPPSAAMSGVGHRKVVSFAESNDNGGCAGGARPPYXXXXXXETRASDPAVSNGDDRQDLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--AVGSSGSGGDIAPARWTAPGEPPIQAASGGKRTTRADVSGRNPFAKSGNPFAVSPSAADGQGRGGGAGRWVDGDGAAGCEEDRGARGGRGRENRSGRGXXXXXXADRDQPIAAGGAGASDAPYSAALVXXXXXXKDLNNGKGWGWYDEEDHAXXXXXGXAATPAGGAGRWKDVADSXXXXXXXXXXXXXXXXGGXXXXXXXXXXXXXLGKHDLGQALRMIVSNRVVLVLFAASSVRMIGTWASAGYMAV 554
BLAST of mRNA_Ecto-sp13_S_contig8683.20138.1 vs. uniprot
Match: A0A835Z7W4_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7W4_9STRA) HSP 1 Score: 223 bits (568), Expect = 8.190e-61 Identity = 109/206 (52.91%), Postives = 152/206 (73.79%), Query Frame = 1
Query: 4 NLVAVSVEDC-DVCDDVSFVPLCYMD-DELASSEADCLSCRYSYSTEFYNLKARDGACIDNSQYSILAGVCFTIPFAIATLFAGRLTDTLNRRLLHTGAILVWSLAAAAHGVCEDFSCLMVSQIVLGIGEAFNAPACYAMITLYFPHSKRATANGIYSSGTYLGSAMSSLCLALAVLLGWRNTAFLAGAFGVLAGAVLFFTVEHNP 615
NL AVS C ++CDDV F PLC + D+ + DC +CR +Y +YNLK DGAC+ ++QY +LAG FT+ FA LFAGR+ DT+NRRLLH+GA+L+WS+A AA G+C + C++ +++ L IG+AFNAPACY++I YFP S+R+TANG+YS+GTYLG+ +SSLC+ A L+GWR T+++AG+ GV ++LF TVE P
Sbjct: 60 NLSAVSAPQCTELCDDVPFQPLCTVACDDGDTDCVDCATCRTAYDNGWYNLK--DGACVTSAQYGLLAGFGFTVMFAAVGLFAGRMCDTMNRRLLHSGAVLMWSVATAATGLCTSYPCVLAARVFLAIGQAFNAPACYSVIDWYFP-SRRSTANGVYSAGTYLGAGLSSLCILAAELVGWRRTSYIAGSTGVFMASILFHTVEQPP 262
BLAST of mRNA_Ecto-sp13_S_contig8683.20138.1 vs. uniprot
Match: A0A835Z7U8_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7U8_9STRA) HSP 1 Score: 216 bits (549), Expect = 6.640e-59 Identity = 112/217 (51.61%), Postives = 149/217 (68.66%), Query Frame = 1
Query: 4 NLVAVSVEDCD-VCDDVSFVPLCYMDDELASSEAD----CLSCRYSYSTEFYNLKARDGACIDNSQYSILAGVCFTIPFAIATLFAGRLTDTLNRRLLHTGAILVWSLAAAAHGVCEDFSCLMVSQIVLGIGEAFNAPACYAMITLYFPHSKRATANGIYSSGTYLGSAMSSLCLALAVLLGWRNTAFLAGAFGVLAGAVLFFTVEHNPVMPPSNDG 639
NL AVS C +C+ V+F PLC + AS +AD C CR +Y + +YNLK DGAC+ N+QY LAG FT+ FA+ LFAGRL DT+NRRLLH GA+LVWS A A G+C + C++ S++ + +GEAFNAPACY+++ YFP +KR+TANGIYS+GTYLG+ +SSLC+ A +GWR T+F AG G+ ++L+ TVE PPS G
Sbjct: 60 NLSAVSAAQCSALCEGVAFEPLCTVSCASAS-DADACSLCADCRAAYDSAYYNLK--DGACVSNAQYGTLAGFGFTLMFALVGLFAGRLCDTMNRRLLHAGAVLVWSAATGAGGLCTSYGCVLASRVAVAVGEAFNAPACYSLLDWYFP-AKRSTANGIYSTGTYLGAGLSSLCILAASAIGWRRTSFAAGCAGLFMASLLYNTVE----QPPSRVG 268
BLAST of mRNA_Ecto-sp13_S_contig8683.20138.1 vs. uniprot
Match: A0A7S3XX01_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XX01_HETAK) HSP 1 Score: 184 bits (466), Expect = 6.370e-47 Identity = 99/219 (45.21%), Postives = 129/219 (58.90%), Query Frame = 1
Query: 4 NLVAVSVEDC-DVCDDVSFVPLCYMDDELASSEADCLSCRYSYSTEF-YNLKARDGACIDNSQYSILAGVCFTIPFAIATLFAGRLTDTLNRRLLHTGAILVWSLAAAAHGVCEDFSCLMVSQIVLGIGEAFNAPACYAMITLYFPHSKRATANGIYSSGTYLGSAMSSLCLALAVLLGWRNTAFLAGAFGVLAGAVLFFTVEHNPVMPPSNDGYTKLP 654
+L AVS +C +VC V ++PLC E S E C SC+ S + DGAC+ +S+Y ILAG FT+ FA LFAGRL D L RRLL A+L WS G C F CL+++++V+G +AFNAP CY + YF +RATANG+YS+G +LG+A+ SL +ALA +GWR+T LAG GVL AV+F T P P G P
Sbjct: 37 SLAAVSTPECHEVCSGVPYIPLCETCPEN-SLEQLCNSCKTCRSDNLSWEKNINDGACVSSSEYGILAGFGFTLIFATCGLFAGRLADRLERRLLLALAVLAWSAGTLLQGACRSFRCLLLARLVVGAAQAFNAPCCYIFVAQYFEERRRATANGVYSAGNFLGAALGSLSIALASAVGWRDTCALAGTVGVLVAAVVFLTARDRPAGPARPPGAPPPP 254
BLAST of mRNA_Ecto-sp13_S_contig8683.20138.1 vs. uniprot
Match: A0A7S3NPU8_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NPU8_9STRA) HSP 1 Score: 169 bits (428), Expect = 2.070e-41 Identity = 95/209 (45.45%), Postives = 130/209 (62.20%), Query Frame = 1
Query: 40 CDDVSFVPLCYMDDELASSEAD--CLSCRYSYSTEFYNLKARDGACIDNSQYSILAGVCFTIPFAIATLFAGRLTDTLN-RRLLHTGAILVWSLAAAAHGVCEDFSCLMVSQIVLGIGEAFNAPACYAMITLYFPHS--KRATANGIYSSGTYLGSAMSSLCLALAVLLGWRNTAFLAGAFGVLAGAVLFFTVEHNPVMPP---SNDGY 642
CD FVPLC SSE+ C CR ++Y++ RD ACI + QY ILA + FTI FA++++ AGR+ D L R+LH GA L+WSLAA A +F+ L++S+I+LGI + FNAP Y +I +F H+ RA ANG+YS GTYLGSA+SSL L L ++ GWR A +A FGV A+++ V+ P PP +ND +
Sbjct: 54 CDGALFVPLCTSCPTQKSSESCSVCQECRRKNDADYYSI--RDSACISDKQYGILASIAFTICFALSSIIAGRIADYLRGSRILHAGAALIWSLAAFAVVPNPNFTVLIISRIILGIAQGFNAPCAYPVIAYFFSHNGDHRALANGVYSIGTYLGSALSSLSLVLTMIFGWRTIATIAAIFGVFCAALIYLFVDRPP--PPILKNNDSF 258
BLAST of mRNA_Ecto-sp13_S_contig8683.20138.1 vs. uniprot
Match: F0YAA8_AURAN (MFS domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAA8_AURAN) HSP 1 Score: 167 bits (424), Expect = 2.710e-40 Identity = 90/208 (43.27%), Postives = 126/208 (60.58%), Query Frame = 1
Query: 34 DVCDDVSFVPLCYMDD--ELASSEAD----CLSCRYSYSTEFYNLKARDGACIDNSQYSILAGVCFTIPFAIATLFAGRLTDTLNRRLLHTGAILVWSLAAAAHGVCEDFSCLMVSQIVLGIGEAFNAPACYAMITLYFPHSKRATANGIYSSGTYLGSAMSSLCLALAVLLGWRNTAFLAGAFGVLAGAVLFFTVEHNPVMPPSNDG 639
D C+ +FVP+C L S D C CR +EFY+L RD AC+ ++QY +LA V FTI FA + L AG LTD L+ R LH GA+LVWSL++ V +F L+ ++++G+ + FNAP Y +I +F ++RATANG+YS GTY GSA+S+L L A+ +GWR T A G+ A A+L+ TV+ P + DG
Sbjct: 48 DTCEGATFVPICSSCGAASLGSESEDTCRACQECRIEEESEFYSL--RDAACMSDAQYGLLASVSFTIMFAASGLVAGHLTDRLDARKLHAGAVLVWSLSSFVKVVSPNFKLLVCMRLIMGVAQGFNAPCSYPVIAYHFSMAERATANGMYSMGTYFGSALSTLSLIFAMWVGWRMTTTAAVVVGIFAAALLYLTVDRPPQRYGATDG 253
BLAST of mRNA_Ecto-sp13_S_contig8683.20138.1 vs. uniprot
Match: A0A7S2V0W5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0W5_9STRA) HSP 1 Score: 152 bits (384), Expect = 3.550e-39 Identity = 86/184 (46.74%), Postives = 114/184 (61.96%), Query Frame = 1
Query: 4 NLVAVSVEDCDV-CDDVSFVPLC-----YMDD---ELASSEAD-CLSCRYSYSTEFYNLKARDGACIDNSQYSILAGVCFTIPFAIATLFAGRLTDTLNRRLLHTGAILVWSLAAAAHGVCEDFSCLMVSQIVLGIGEAFNAPACYAMITLYFPHSKRATANGIYSSGTYLGSAMSSLCLALAV 525
+L AV+ C+ C++V F P+C + D EL SS + C CR YNLK DGACI N Y ILAG FT+ FA LFAGRL+ +RRL+H AI +WS+A C F C++VS+I++G+G+AFNAP Y I FP KR+TANG+YS+GTYLG+ +SSL L +A+
Sbjct: 27 HLSAVTTPACEAQCENVPFHPICEECPTHSPDGWHELHSSHCEICRECRIEEKAWSYNLK--DGACISNRDYGILAGFGFTLMFATCGLFAGRLSVMFSRRLVHVSAIALWSIATLYQASCGTFECMLVSRILVGVGQAFNAPCAYMTIAALFPVEKRSTANGLYSTGTYLGAGLSSLSLMMAL 208
BLAST of mRNA_Ecto-sp13_S_contig8683.20138.1 vs. uniprot
Match: D7G1B5_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1B5_ECTSI) HSP 1 Score: 125 bits (314), Expect = 4.880e-27 Identity = 61/161 (37.89%), Postives = 97/161 (60.25%), Query Frame = 1
Query: 148 LKARDGACIDNSQYSILAGVCFTIPFAIATLFAGRLTDTLNRRLLHTGAILVWSLAAAAHGVCEDFSCLMVSQIVLGIGEAFNAPACYAMITLYFPHSKRATANGIYSSGTYLGSAMSSLCLALAVLLGWRNTAFLAGAFGVLAGAVLFFTVEHNPVMPPS 630
+ D I S+Y +L G F+ + I LF GR D NR+L+ +++W++A G+ E+F L++S+I+LGIGE+F+ PA Y++I YFP A ANG+++ G Y+G +SSL +A+A +GWR +AF +G+L ++ FTV P P+
Sbjct: 53 ISIEDATGISTSEYGLLVGYGFSFCYVICGLFMGRAADLYNRKLIIFYGLVIWNVATVCLGMSENFVQLLLSRILLGIGESFSMPASYSLIADYFPAESLAQANGVFAFGVYVGGGLSSLSIAMAQGIGWRGSAFTVAGYGLLLSLLVRFTVRE-PARTPA 212
BLAST of mRNA_Ecto-sp13_S_contig8683.20138.1 vs. uniprot
Match: A0A7S2Y1D3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1D3_9STRA) HSP 1 Score: 124 bits (311), Expect = 6.460e-27 Identity = 57/142 (40.14%), Postives = 90/142 (63.38%), Query Frame = 1
Query: 181 SQYSILAGVCFTIPFAIATLFAGRLTDTLNRRLLHTGAILVWSLAAAAHGVCEDFSCLMVSQIVLGIGEAFNAPACYAMITLYFPHSKRATANGIYSSGTYLGSAMSSLCLALAVLLGWRNTAFLAGAFGVLAGAVLFFTVE 606
+QY LAG F+ F I+ LF GR D NR+L+ + +W+ G+ +++ L++S+++LG+GE+F++PA Y++I YFP + ATANGI++ G YLG +SSL + +A +GWR+T FL G + AV TV+
Sbjct: 62 TQYGFLAGYGFSFVFVISGLFMGRAADLYNRKLIVFLGLAIWNAGVFIQGLSQNYQQLLLSRVILGVGESFSSPASYSLIADYFPKERLATANGIFAWGVYLGGGLSSLSITMAESIGWRSTTFLVAMVGFVLAAVFVLTVQ 203 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8683.20138.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8683.20138.1 >prot_Ecto-sp13_S_contig8683.20138.1 ID=prot_Ecto-sp13_S_contig8683.20138.1|Name=mRNA_Ecto-sp13_S_contig8683.20138.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=591bp ANLVAVSVEDCDVCDDVSFVPLCYMDDELASSEADCLSCRYSYSTEFYNLback to top mRNA from alignment at Ecto-sp13_S_contig8683:607..4639- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8683.20138.1 ID=mRNA_Ecto-sp13_S_contig8683.20138.1|Name=mRNA_Ecto-sp13_S_contig8683.20138.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4033bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8683:607..4639- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8683:607..4639- >mRNA_Ecto-sp13_S_contig8683.20138.1 ID=mRNA_Ecto-sp13_S_contig8683.20138.1|Name=mRNA_Ecto-sp13_S_contig8683.20138.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1773bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8683:607..4639- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |