mRNA_Ecto-sp13_S_contig8683.20138.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig8683.20138.1
Unique NamemRNA_Ecto-sp13_S_contig8683.20138.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig8683.20138.1 vs. uniprot
Match: D8LLS6_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLS6_ECTSI)

HSP 1 Score: 652 bits (1683), Expect = 4.800e-225
Identity = 466/598 (77.93%), Postives = 474/598 (79.26%), Query Frame = 1
Query:   73 MDDELASSEADCLSCRYSYSTEFYNLKARDGACIDNSQYSILAGVCFTIPFAIATLFAGRLTDTLNRRLLHTGAILVWSLAAAAHGVCEDFSCLMVSQIVLGIGEAFNAPACYAMITLYFPHSKRATANGIYSSGTYLGSAMSSLCLALAVLLGWRNTAFLAGAFGVLAGAVLFFTVEHNPVMPPSNDGYTKLPDDDDDVGDGLAEEPXXXXXXXXSHETCTKLEPLLPSAAMAGVGHRKVVSFGDSNGNGGGAGGARASYGGCVGGETRAADPAVGNDNDRQELATAAAEAGRRESWXXXXXXXXXXXXXXXXXXXXXXXXXXXPASAGGAVGSSGSGGDIAPARWVAPG--------------ESPIRAAGGGRRTIRANVSGRNPFAKSGNPFAVSPSAAEGQWRGGGAGRWVDGDGAAGCEEDRGARGGRGRGNGIGRGGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKDPNNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG-----------------LGKHDLGQALRMIVSNRVVLVLFAASSARMIGTWASAGYMAV 1773
            MDDELASSEADCLSCRYSYSTEFYNLK  DGACIDNSQYSILAGVCFTIPFAIATLFAGRLTDTLNRRLLHTGAILVWSLAAAAHGVCEDFSCLMVSQIVLG+GEAFNAPACYAMITLYFPHSKRATANGIYS+GTYLGSAMSSLCLALAVLLGWRNTAFLAGAFGVLAGAVLFFTVEHNPVMPPSNDGYTKLPD             XXXXXXXXSHE CTKLEPL PSAAMAGVGHRKVVSF DSNGNGGGAGGARA YGGCVGGETR ADPAV N +DRQELA  AAEAGRRES XXXXXXXXXXXXXXXXXXXXXXX      S GG VGSSGSGGDIAPARW APG              E PI+AAGGGRRT RA+VSGRNPFAKSGNPFAVSPSAAEGQ RG GAGRWVD DGAAGCEEDRG RGGRGR                   XXXXXXXXXXXX           S  P ++   XXXXXXXXXXXXXXXXX   XXXXXXXXXXXXXXXX              G                 LGKHDLG+ALRMIVSNRVVLVLFAASSARMIGTWASAGYMAV
Sbjct:    1 MDDELASSEADCLSCRYSYSTEFYNLK--DGACIDNSQYSILAGVCFTIPFAIATLFAGRLTDTLNRRLLHTGAILVWSLAAAAHGVCEDFSCLMVSQIVLGMGEAFNAPACYAMITLYFPHSKRATANGIYSTGTYLGSAMSSLCLALAVLLGWRNTAFLAGAFGVLAGAVLFFTVEHNPVMPPSNDGYTKLPDXXXXXXXXXXXX-XXXXXXXXSHEKCTKLEPLPPSAAMAGVGHRKVVSFADSNGNGGGAGGARALYGGCVGGETRTADPAVSNGDDRQELA--AAEAGRRESXXXXXXXXXXXXXXXXXXXXXXXX------SRGGTVGSSGSGGDIAPARWAAPGAXXXAPPARFLAPLEPPIQAAGGGRRTTRADVSGRNPFAKSGNPFAVSPSAAEGQGRGCGAGRWVDDDGAAGCEEDRGTRGGRGR------------------RXXXXXXXXXXXXDQPIAAGGAGASDAPYSAALVXXXXXXXXXXXXXXXXXYDEXXXXXXXXXXXXXXXXPAGGAGRWKDVEDSGPRRGXXXXXXXXXXXXXLGKHDLGEALRMIVSNRVVLVLFAASSARMIGTWASAGYMAV 569          
BLAST of mRNA_Ecto-sp13_S_contig8683.20138.1 vs. uniprot
Match: A0A6H5KX10_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX10_9PHAE)

HSP 1 Score: 576 bits (1485), Expect = 5.460e-194
Identity = 407/551 (73.87%), Postives = 419/551 (76.04%), Query Frame = 1
Query:  160 DGACIDNSQYSILAGVCFTIPFAIATLFAGRLTDTLNRRLLHTGAILVWSLAAAAHGVCEDFSCLMVSQIVLGIGEAFNAPACYAMITLYFPHSKRATANGIYSSGTYLGSAMSSLCLALAVLLGWRNTAFLAGAFGVLAGAVLFFTVEHNPVMPPSNDGYTKLPDDDDDVGDGLAEEPXXXXXXXXSHETCTKLEPLLPSAAMAGVGHRKVVSFGDSNGNGGGAGGARASYGGCVGGETRAADPAVGNDNDRQELATAAAEAGRRESWXXXXXXXXXXXXXXXXXXXXXXXXXXXPASAGGAVGSSGSGGDIAPARWVAPGESPIRAAGGGRRTIRANVSGRNPFAKSGNPFAVSPSAAEGQWRGGGAGRWVDGDGAAGCEEDRGARGGRGRGNGIGRGGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKDPNNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG-------------LGKHDLGQALRMIVSNRVVLVLFAASSARMIGTWASAGYMAV 1773
            DGACIDNSQYSILAGVCFTIPFAIATLFAGRLTDTLNRRLLHTGAILVWSLAAAAHGVCEDFSCLMVSQIVLG+G+AFNAPACYAMITLYFPHSKRATANGIYSSGTYLGSA+SSLCLALAVLLGWRNTAFLAGA GVLA AVLFFTVEHNPVMPPS DGYTKLPD             XXXXXXXXSHE CTKLEPL PSAAM+GVGHRKVVSF +SN NGG AGGAR  Y      ETRA+DPAV N +DRQ+LA            XXXXXXXXXXXXXXXXXXXXXXXXXXX      AVGSSGSGGDIAPARW APGE PI+AA GG+RT RA+VSGRNPFAKSGNPFAVSPSAA+GQ RGGGAGRWVDGDGAAGCEEDRGARGGRGR N  GRG   XXX                        XXXXX KD NN             XXXXX X                 XXXXXXXXXXXXXXXX G             LGKHDLGQALRMIVSNRVVLVLFAASS RMIGTWASAGYMAV
Sbjct:    6 DGACIDNSQYSILAGVCFTIPFAIATLFAGRLTDTLNRRLLHTGAILVWSLAAAAHGVCEDFSCLMVSQIVLGMGQAFNAPACYAMITLYFPHSKRATANGIYSSGTYLGSAISSLCLALAVLLGWRNTAFLAGASGVLAAAVLFFTVEHNPVMPPSEDGYTKLPDXXXXXXXXXXXXXXXXXXXXXSHEKCTKLEPLPPSAAMSGVGHRKVVSFAESNDNGGCAGGARPPYXXXXXXETRASDPAVSNGDDRQDLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--AVGSSGSGGDIAPARWTAPGEPPIQAASGGKRTTRADVSGRNPFAKSGNPFAVSPSAADGQGRGGGAGRWVDGDGAAGCEEDRGARGGRGRENRSGRGXXXXXXADRDQPIAAGGAGASDAPYSAALVXXXXXXKDLNNGKGWGWYDEEDHAXXXXXGXAATPAGGAGRWKDVADSXXXXXXXXXXXXXXXXGGXXXXXXXXXXXXXLGKHDLGQALRMIVSNRVVLVLFAASSVRMIGTWASAGYMAV 554          
BLAST of mRNA_Ecto-sp13_S_contig8683.20138.1 vs. uniprot
Match: A0A835Z7W4_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7W4_9STRA)

HSP 1 Score: 223 bits (568), Expect = 8.190e-61
Identity = 109/206 (52.91%), Postives = 152/206 (73.79%), Query Frame = 1
Query:    4 NLVAVSVEDC-DVCDDVSFVPLCYMD-DELASSEADCLSCRYSYSTEFYNLKARDGACIDNSQYSILAGVCFTIPFAIATLFAGRLTDTLNRRLLHTGAILVWSLAAAAHGVCEDFSCLMVSQIVLGIGEAFNAPACYAMITLYFPHSKRATANGIYSSGTYLGSAMSSLCLALAVLLGWRNTAFLAGAFGVLAGAVLFFTVEHNP 615
            NL AVS   C ++CDDV F PLC +  D+  +   DC +CR +Y   +YNLK  DGAC+ ++QY +LAG  FT+ FA   LFAGR+ DT+NRRLLH+GA+L+WS+A AA G+C  + C++ +++ L IG+AFNAPACY++I  YFP S+R+TANG+YS+GTYLG+ +SSLC+  A L+GWR T+++AG+ GV   ++LF TVE  P
Sbjct:   60 NLSAVSAPQCTELCDDVPFQPLCTVACDDGDTDCVDCATCRTAYDNGWYNLK--DGACVTSAQYGLLAGFGFTVMFAAVGLFAGRMCDTMNRRLLHSGAVLMWSVATAATGLCTSYPCVLAARVFLAIGQAFNAPACYSVIDWYFP-SRRSTANGVYSAGTYLGAGLSSLCILAAELVGWRRTSYIAGSTGVFMASILFHTVEQPP 262          
BLAST of mRNA_Ecto-sp13_S_contig8683.20138.1 vs. uniprot
Match: A0A835Z7U8_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7U8_9STRA)

HSP 1 Score: 216 bits (549), Expect = 6.640e-59
Identity = 112/217 (51.61%), Postives = 149/217 (68.66%), Query Frame = 1
Query:    4 NLVAVSVEDCD-VCDDVSFVPLCYMDDELASSEAD----CLSCRYSYSTEFYNLKARDGACIDNSQYSILAGVCFTIPFAIATLFAGRLTDTLNRRLLHTGAILVWSLAAAAHGVCEDFSCLMVSQIVLGIGEAFNAPACYAMITLYFPHSKRATANGIYSSGTYLGSAMSSLCLALAVLLGWRNTAFLAGAFGVLAGAVLFFTVEHNPVMPPSNDG 639
            NL AVS   C  +C+ V+F PLC +    AS +AD    C  CR +Y + +YNLK  DGAC+ N+QY  LAG  FT+ FA+  LFAGRL DT+NRRLLH GA+LVWS A  A G+C  + C++ S++ + +GEAFNAPACY+++  YFP +KR+TANGIYS+GTYLG+ +SSLC+  A  +GWR T+F AG  G+   ++L+ TVE     PPS  G
Sbjct:   60 NLSAVSAAQCSALCEGVAFEPLCTVSCASAS-DADACSLCADCRAAYDSAYYNLK--DGACVSNAQYGTLAGFGFTLMFALVGLFAGRLCDTMNRRLLHAGAVLVWSAATGAGGLCTSYGCVLASRVAVAVGEAFNAPACYSLLDWYFP-AKRSTANGIYSTGTYLGAGLSSLCILAASAIGWRRTSFAAGCAGLFMASLLYNTVE----QPPSRVG 268          
BLAST of mRNA_Ecto-sp13_S_contig8683.20138.1 vs. uniprot
Match: A0A7S3XX01_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XX01_HETAK)

HSP 1 Score: 184 bits (466), Expect = 6.370e-47
Identity = 99/219 (45.21%), Postives = 129/219 (58.90%), Query Frame = 1
Query:    4 NLVAVSVEDC-DVCDDVSFVPLCYMDDELASSEADCLSCRYSYSTEF-YNLKARDGACIDNSQYSILAGVCFTIPFAIATLFAGRLTDTLNRRLLHTGAILVWSLAAAAHGVCEDFSCLMVSQIVLGIGEAFNAPACYAMITLYFPHSKRATANGIYSSGTYLGSAMSSLCLALAVLLGWRNTAFLAGAFGVLAGAVLFFTVEHNPVMPPSNDGYTKLP 654
            +L AVS  +C +VC  V ++PLC    E  S E  C SC+   S    +     DGAC+ +S+Y ILAG  FT+ FA   LFAGRL D L RRLL   A+L WS      G C  F CL+++++V+G  +AFNAP CY  +  YF   +RATANG+YS+G +LG+A+ SL +ALA  +GWR+T  LAG  GVL  AV+F T    P  P    G    P
Sbjct:   37 SLAAVSTPECHEVCSGVPYIPLCETCPEN-SLEQLCNSCKTCRSDNLSWEKNINDGACVSSSEYGILAGFGFTLIFATCGLFAGRLADRLERRLLLALAVLAWSAGTLLQGACRSFRCLLLARLVVGAAQAFNAPCCYIFVAQYFEERRRATANGVYSAGNFLGAALGSLSIALASAVGWRDTCALAGTVGVLVAAVVFLTARDRPAGPARPPGAPPPP 254          
BLAST of mRNA_Ecto-sp13_S_contig8683.20138.1 vs. uniprot
Match: A0A7S3NPU8_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NPU8_9STRA)

HSP 1 Score: 169 bits (428), Expect = 2.070e-41
Identity = 95/209 (45.45%), Postives = 130/209 (62.20%), Query Frame = 1
Query:   40 CDDVSFVPLCYMDDELASSEAD--CLSCRYSYSTEFYNLKARDGACIDNSQYSILAGVCFTIPFAIATLFAGRLTDTLN-RRLLHTGAILVWSLAAAAHGVCEDFSCLMVSQIVLGIGEAFNAPACYAMITLYFPHS--KRATANGIYSSGTYLGSAMSSLCLALAVLLGWRNTAFLAGAFGVLAGAVLFFTVEHNPVMPP---SNDGY 642
            CD   FVPLC       SSE+   C  CR     ++Y++  RD ACI + QY ILA + FTI FA++++ AGR+ D L   R+LH GA L+WSLAA A     +F+ L++S+I+LGI + FNAP  Y +I  +F H+   RA ANG+YS GTYLGSA+SSL L L ++ GWR  A +A  FGV   A+++  V+  P  PP   +ND +
Sbjct:   54 CDGALFVPLCTSCPTQKSSESCSVCQECRRKNDADYYSI--RDSACISDKQYGILASIAFTICFALSSIIAGRIADYLRGSRILHAGAALIWSLAAFAVVPNPNFTVLIISRIILGIAQGFNAPCAYPVIAYFFSHNGDHRALANGVYSIGTYLGSALSSLSLVLTMIFGWRTIATIAAIFGVFCAALIYLFVDRPP--PPILKNNDSF 258          
BLAST of mRNA_Ecto-sp13_S_contig8683.20138.1 vs. uniprot
Match: F0YAA8_AURAN (MFS domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAA8_AURAN)

HSP 1 Score: 167 bits (424), Expect = 2.710e-40
Identity = 90/208 (43.27%), Postives = 126/208 (60.58%), Query Frame = 1
Query:   34 DVCDDVSFVPLCYMDD--ELASSEAD----CLSCRYSYSTEFYNLKARDGACIDNSQYSILAGVCFTIPFAIATLFAGRLTDTLNRRLLHTGAILVWSLAAAAHGVCEDFSCLMVSQIVLGIGEAFNAPACYAMITLYFPHSKRATANGIYSSGTYLGSAMSSLCLALAVLLGWRNTAFLAGAFGVLAGAVLFFTVEHNPVMPPSNDG 639
            D C+  +FVP+C       L S   D    C  CR    +EFY+L  RD AC+ ++QY +LA V FTI FA + L AG LTD L+ R LH GA+LVWSL++    V  +F  L+  ++++G+ + FNAP  Y +I  +F  ++RATANG+YS GTY GSA+S+L L  A+ +GWR T   A   G+ A A+L+ TV+  P    + DG
Sbjct:   48 DTCEGATFVPICSSCGAASLGSESEDTCRACQECRIEEESEFYSL--RDAACMSDAQYGLLASVSFTIMFAASGLVAGHLTDRLDARKLHAGAVLVWSLSSFVKVVSPNFKLLVCMRLIMGVAQGFNAPCSYPVIAYHFSMAERATANGMYSMGTYFGSALSTLSLIFAMWVGWRMTTTAAVVVGIFAAALLYLTVDRPPQRYGATDG 253          
BLAST of mRNA_Ecto-sp13_S_contig8683.20138.1 vs. uniprot
Match: A0A7S2V0W5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0W5_9STRA)

HSP 1 Score: 152 bits (384), Expect = 3.550e-39
Identity = 86/184 (46.74%), Postives = 114/184 (61.96%), Query Frame = 1
Query:    4 NLVAVSVEDCDV-CDDVSFVPLC-----YMDD---ELASSEAD-CLSCRYSYSTEFYNLKARDGACIDNSQYSILAGVCFTIPFAIATLFAGRLTDTLNRRLLHTGAILVWSLAAAAHGVCEDFSCLMVSQIVLGIGEAFNAPACYAMITLYFPHSKRATANGIYSSGTYLGSAMSSLCLALAV 525
            +L AV+   C+  C++V F P+C     +  D   EL SS  + C  CR       YNLK  DGACI N  Y ILAG  FT+ FA   LFAGRL+   +RRL+H  AI +WS+A      C  F C++VS+I++G+G+AFNAP  Y  I   FP  KR+TANG+YS+GTYLG+ +SSL L +A+
Sbjct:   27 HLSAVTTPACEAQCENVPFHPICEECPTHSPDGWHELHSSHCEICRECRIEEKAWSYNLK--DGACISNRDYGILAGFGFTLMFATCGLFAGRLSVMFSRRLVHVSAIALWSIATLYQASCGTFECMLVSRILVGVGQAFNAPCAYMTIAALFPVEKRSTANGLYSTGTYLGAGLSSLSLMMAL 208          
BLAST of mRNA_Ecto-sp13_S_contig8683.20138.1 vs. uniprot
Match: D7G1B5_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1B5_ECTSI)

HSP 1 Score: 125 bits (314), Expect = 4.880e-27
Identity = 61/161 (37.89%), Postives = 97/161 (60.25%), Query Frame = 1
Query:  148 LKARDGACIDNSQYSILAGVCFTIPFAIATLFAGRLTDTLNRRLLHTGAILVWSLAAAAHGVCEDFSCLMVSQIVLGIGEAFNAPACYAMITLYFPHSKRATANGIYSSGTYLGSAMSSLCLALAVLLGWRNTAFLAGAFGVLAGAVLFFTVEHNPVMPPS 630
            +   D   I  S+Y +L G  F+  + I  LF GR  D  NR+L+    +++W++A    G+ E+F  L++S+I+LGIGE+F+ PA Y++I  YFP    A ANG+++ G Y+G  +SSL +A+A  +GWR +AF    +G+L   ++ FTV   P   P+
Sbjct:   53 ISIEDATGISTSEYGLLVGYGFSFCYVICGLFMGRAADLYNRKLIIFYGLVIWNVATVCLGMSENFVQLLLSRILLGIGESFSMPASYSLIADYFPAESLAQANGVFAFGVYVGGGLSSLSIAMAQGIGWRGSAFTVAGYGLLLSLLVRFTVRE-PARTPA 212          
BLAST of mRNA_Ecto-sp13_S_contig8683.20138.1 vs. uniprot
Match: A0A7S2Y1D3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1D3_9STRA)

HSP 1 Score: 124 bits (311), Expect = 6.460e-27
Identity = 57/142 (40.14%), Postives = 90/142 (63.38%), Query Frame = 1
Query:  181 SQYSILAGVCFTIPFAIATLFAGRLTDTLNRRLLHTGAILVWSLAAAAHGVCEDFSCLMVSQIVLGIGEAFNAPACYAMITLYFPHSKRATANGIYSSGTYLGSAMSSLCLALAVLLGWRNTAFLAGAFGVLAGAVLFFTVE 606
            +QY  LAG  F+  F I+ LF GR  D  NR+L+    + +W+      G+ +++  L++S+++LG+GE+F++PA Y++I  YFP  + ATANGI++ G YLG  +SSL + +A  +GWR+T FL    G +  AV   TV+
Sbjct:   62 TQYGFLAGYGFSFVFVISGLFMGRAADLYNRKLIVFLGLAIWNAGVFIQGLSQNYQQLLLSRVILGVGESFSSPASYSLIADYFPKERLATANGIFAWGVYLGGGLSSLSITMAESIGWRSTTFLVAMVGFVLAAVFVLTVQ 203          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8683.20138.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLS6_ECTSI4.800e-22577.93Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KX10_9PHAE5.460e-19473.87MFS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835Z7W4_9STRA8.190e-6152.91Major facilitator superfamily domain-containing pr... [more]
A0A835Z7U8_9STRA6.640e-5951.61Major facilitator superfamily domain-containing pr... [more]
A0A7S3XX01_HETAK6.370e-4745.21Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3NPU8_9STRA2.070e-4145.45Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
F0YAA8_AURAN2.710e-4043.27MFS domain-containing protein n=1 Tax=Aureococcus ... [more]
A0A7S2V0W5_9STRA3.550e-3946.74Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
D7G1B5_ECTSI4.880e-2737.89MFS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S2Y1D3_9STRA6.460e-2740.14Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8683contigEcto-sp13_S_contig8683:607..4639 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score658.3
Seed ortholog evalue3.4e-186
Seed eggNOG ortholog2880.D8LLS6
Model size1773
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.Major Facilitator Superfamily
EggNOG OGs2CZE1@1,2S9X8@2759
Cds size1773
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8683.20138.1prot_Ecto-sp13_S_contig8683.20138.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig8683 607..4639 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464140.8974214-CDS-Ecto-sp13_S_contig8683:606..18471681464140.8974214-CDS-Ecto-sp13_S_contig8683:606..1847Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8683 607..1847 -
1681464140.912115-CDS-Ecto-sp13_S_contig8683:2322..24971681464140.912115-CDS-Ecto-sp13_S_contig8683:2322..2497Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8683 2323..2497 -
1681464140.924007-CDS-Ecto-sp13_S_contig8683:2986..30681681464140.924007-CDS-Ecto-sp13_S_contig8683:2986..3068Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8683 2987..3068 -
1681464140.9443061-CDS-Ecto-sp13_S_contig8683:3595..37111681464140.9443061-CDS-Ecto-sp13_S_contig8683:3595..3711Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8683 3596..3711 -
1681464140.9586406-CDS-Ecto-sp13_S_contig8683:4058..41361681464140.9586406-CDS-Ecto-sp13_S_contig8683:4058..4136Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8683 4059..4136 -
1681464140.9687743-CDS-Ecto-sp13_S_contig8683:4558..46391681464140.9687743-CDS-Ecto-sp13_S_contig8683:4558..4639Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8683 4559..4639 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig8683.20138.1

>prot_Ecto-sp13_S_contig8683.20138.1 ID=prot_Ecto-sp13_S_contig8683.20138.1|Name=mRNA_Ecto-sp13_S_contig8683.20138.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=591bp
ANLVAVSVEDCDVCDDVSFVPLCYMDDELASSEADCLSCRYSYSTEFYNL
KARDGACIDNSQYSILAGVCFTIPFAIATLFAGRLTDTLNRRLLHTGAIL
VWSLAAAAHGVCEDFSCLMVSQIVLGIGEAFNAPACYAMITLYFPHSKRA
TANGIYSSGTYLGSAMSSLCLALAVLLGWRNTAFLAGAFGVLAGAVLFFT
VEHNPVMPPSNDGYTKLPDDDDDVGDGLAEEPSSLLPPPPSHETCTKLEP
LLPSAAMAGVGHRKVVSFGDSNGNGGGAGGARASYGGCVGGETRAADPAV
GNDNDRQELATAAAEAGRRESWSSASSTSSTSSYEYAGSGAGGGGGGGGP
ASAGGAVGSSGSGGDIAPARWVAPGESPIRAAGGGRRTIRANVSGRNPFA
KSGNPFAVSPSAAEGQWRGGGAGRWVDGDGAAGCEEDRGARGGRGRGNGI
GRGGGGRGGAGRCQPIAAGGAGASDAPYSAALVAVGAGSKDPNNSSGGGW
YDEEDHAAAAAGAAAAPPAGGGGTWKDVEDSGPQRGGGGGGGGGGGGGGL
GKHDLGQALRMIVSNRVVLVLFAASSARMIGTWASAGYMAV
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mRNA from alignment at Ecto-sp13_S_contig8683:607..4639-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig8683.20138.1 ID=mRNA_Ecto-sp13_S_contig8683.20138.1|Name=mRNA_Ecto-sp13_S_contig8683.20138.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4033bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8683:607..4639- (Ectocarpus species13 EcNAP12_S_4_19m)
GCGAACCTCGTGGCGGTGTCTGTGGAGGACTGCGACGTGTGCGACGACGT GTCCTTCGTTCCGCTGTGCTACATGGACGATGTGAGAGAGAGAGAGAAGA TCGAGCCATGTGGCGCAGGATCGTGTCGTCTACACGAGAAACGAGCTATT CGATGATTGTATTCGTCGCTTGGTGTTGGCTGGCGGCCGAAGGCGTCGAG CTTCGAATTCAATCCTTACAGCATCCCGCGCCTTCCGATAAAAATCATGA TGGTACAACACCAATCTGGCGATTAAGAATGTTCCGATTCCCTATCCCGG GATCAACGGGAGTGAGGGCAATATGCTGTGGTCATCTGTGAAGGTTGTTG CGTGTGCCGTGTGCGTACTTTGCGGCAAACTGTCCACTCTCTTTCGTCGT TGTTTGTTCGGCAGCAGGCGTTGTTGTGTTTGAATCGCCCTCTCTTCTAT TGGCGTCTCGTCCCGTTCCCGCCGCCTTCTGTTGTCTTACGGTGTCGCTT CAGGAATTGGCGTCGAGCGAGGCTGACTGCCTGTCGTGCCGATACTCTTA TAGCACCGAGTTCTACAACCTCAAGGCAAGGGTCTTTGTAGTCGTCGTCG CGTTGTTGTTGCAGCTTGCTGGTGGTGGTGGTAGTGGTGGTGGTTGCTGC TGCGGTTGTTGCTGTTTTCGTCGGGGTCCTTGTTGTCCTTGCCCGTGTTT AACCGTCTCCTTGAGACGATCGCTGCCCCAACTCAATCCGACATTTCATC TCTCGGAAACCTCGTGCGTTCATGCCGCTTACAGTGGTGGGCAACCCCTT GTGGTCTTCCCCACCAAGAAGCGACAGACAGGCGTGCTAGTGGCCGTTTG GAAGTAGCGAGCAACCCACCCACCCTTGATAATCCCTCCTGCACCGTGTG GACCATCGAATGACCGTCTATCCGACAGGATGGAGCTTGCATCGACAACT CTCAGTACTCCATCCTGGCCGGGGTGTGCTTCACCATACCCTTCGCCATC GCGACGCTGTTCGCCGGCCGGTTGACCGACACGTTGAACAGGCGGTACGT ATGTGCATGTGGGGGGGGGGGGAGACAGTCCAAAGAGCGAGTGTTTCGAT CTTTACGAGCAGTGCGGCCGGTGGTGCGCATGCAGGAAGTCTCACCGGGG GGCTCCGCGAAGCACCCACGTGTAGCGCACGTGTCGAGGGCTTCCCGATT GGACTGATCTAAAGTGGTGGATAGCACCGGTGAGCATGAATGCTGAGGCA GACCGAGAGAACTGCCGTCAACAGTCTACCATGTCTTGTTGATTGACGTA TTGACAGGCCGTCGTCGTCGCCACACACACACATTTTTCTGCGTTGTATT GCTTATCTCATGCTGTGCTTGTCGACACGCCCCACGTCCCCCCCCCCCCC CCCCTCACTTCTTTCTTGTGTTTCTAGGTGAGCTTTTTGTGTTTTTTGTT TGGTGTCGGACGCCCGTGGGGGGTGGGTGNNNNNNNNNNATTTTTTTCTG TTTTTTTTTTTTTTTCTTTTGTTGCTTTTGTGGCCCCCCCCCCCCCCCCC CCCCCCCCCCCATTGTTGCAGGCTTTTGCACACAGGGGCTATCCTGGTGT GGTCTCTGGCAGCCGCGGCGCACGGCGTGTGCGAGGACTTCTCGTGCCTA ATGGTAAGATACAGACCCCCAGTTCGTTCAAAGATTGATTCCTATTTTTC ATCCTCTTCAGATACCCCCAACTGCGAAGGACCCCCTCCCCCAAGTCCTA GTGGGCTGCGAAGGCGGGAAGTGATGTCAAAAAGATACATGGGATAGGGA AAGAATTGAGTCACCTTTGACAAAAGTAGGAAGGAGCGATTGACCTTCGG TGATCGATAAGTCCTGTACGAACAGTGCCCCGTCCTCTCGAGGACGCGTC GTCAATGGTCTAGCAGCTGAGGCGCGCAAACCTTGAGAACGTCCCCTTCC TCTCCCCTCCCCGAGTCCCTGCCCTTCATCGAGGTGTCCGACCCTTGGAC CCTCATTTCCTACCGCGGCCGCCGTCTGTTGTTCTTAACACCAGCTGGCA TCACTGTCTAAGAAATCGGGTCATGGGCTTCGATATTTCCTAGAAAAGAA ACCTCTCGCGTCGCCTCGCCTTGCCTCGCCTCGCCTTGGAAGGTATCGCA AATCGTCCTGGGGATTGGCGAGGCCTTCAACGCTCCCGCGTGCTACGCGA TGATCACGCTCTACTTCCCCCACTCCAAGAGGGCCACGGCGAACGGCATC TACTCCTCGGGCACCTACCTGGGCTCCGCCATGTCGAGCCTCTGCCTCGC CCTCGCCGTGCTGCTCGGTGAGTGTCCCGTTTTGTGGTTGTGGGTGGTCG GTGAGTGGGTGGGTGGGTGTTCTGTCGCGGCCGTTTGTTGCGCTGCCGCG TTTAGTTCGAAGAAATTCTCGTTGTTCAAACGATTTTTTTGTTGTTTGTT TTTTATGCTGCTGTGTATGTGCATCACTGATGAGCAGGAAGTAACCCAGA GGGCCCACCGGATTTGTACCCAGCACGTTGCTGTACAAGAAGAAAGATGG GGGGTGGCTGTTCTTGCATACGTAAGCGAGAAAGTGGCAGAAGCGTAGGA ACACCGGAAGCGGCCTATTTGGTCTGAGCTGTTTTCCCAAAACAAACGTG CCGTGTACAGCAGTTATTTTGGAGTTGGTTGACACCTCGAAGACCCCAAC CCCGATATTTCCCGCGCCCCGCTTTTGCGTCGCCCTCATCAACTCCACTA ACCTCTCTCGCCCCCACAAAAATCCACCAACCCGTAAACCAGGGTGGCGA AACACGGCCTTCTTGGCCGGGGCGTTCGGGGTCCTCGCCGGGGCTGTGCT CTTCTTCACGGTGGAGCACAACCCGGTAATGCCGCCCTCCAACGACGGTT ACACCAAGTTGCCCGACGACGATGACGACGTTGGCGACGGCCTAGCCGAG GAACCATCGTCGCTCCTGCCGCCACCGCCGTCGCACGAGACGTGCACGAA GCTCGAGCCGCTGCTGCCTTCGGCCGCGATGGCCGGGGTGGGCCACCGCA AGGTCGTTAGCTTCGGCGATAGCAACGGCAACGGAGGGGGTGCCGGCGGC GCGCGCGCCTCGTACGGGGGTTGCGTGGGCGGGGAGACTAGGGCGGCCGA CCCCGCCGTCGGCAACGACAATGATAGGCAAGAGCTAGCCACAGCGGCAG CGGAGGCTGGGCGGAGAGAGTCGTGGTCGTCGGCGTCGTCGACTTCGTCC ACGTCGTCGTACGAGTACGCCGGCAGCGGCGCCGGGGGCGGCGGCGGCGG CGGCGGCCCGGCCTCCGCGGGAGGAGCGGTGGGCTCGAGTGGCAGCGGCG GCGACATCGCGCCAGCGAGATGGGTGGCGCCGGGGGAGTCGCCCATCCGA GCGGCAGGCGGAGGGAGGAGGACGATAAGGGCCAATGTTTCCGGTAGAAA TCCTTTCGCCAAGAGCGGCAACCCGTTCGCAGTGAGTCCCTCCGCCGCGG AGGGACAATGGAGGGGCGGCGGGGCGGGCCGATGGGTAGACGGTGACGGA GCCGCCGGGTGCGAGGAGGACCGGGGAGCACGAGGGGGAAGAGGGAGGGG GAACGGCATCGGCAGGGGGGGGGGGGGGAGGGGGGGGGCTGGTAGATGCC AACCCATCGCGGCAGGTGGTGCTGGCGCTAGCGACGCGCCGTACTCTGCA GCGCTCGTAGCGGTAGGCGCGGGCTCGAAGGACCCCAACAACAGCAGCGG GGGGGGTTGGTACGACGAAGAGGACCACGCTGCTGCTGCTGCTGGTGCGG CGGCGGCTCCCCCCGCGGGGGGGGGAGGGACATGGAAGGATGTCGAGGAC AGCGGACCTCAGAGGGGAGGGGGCGGAGGTGGGGGGGGGGGGGGGGGGGG GGGGGGTCTGGGGAAGCATGATCTGGGCCAGGCGTTAAGGATGATCGTTT CGAACCGCGTGGTGCTTGTGCTGTTCGCGGCGTCCTCGGCTAGGATGATC GGTACCTGGGCCTCGGCCGGGTACATGGCGGTG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8683:607..4639-

>mRNA_Ecto-sp13_S_contig8683.20138.1 ID=mRNA_Ecto-sp13_S_contig8683.20138.1|Name=mRNA_Ecto-sp13_S_contig8683.20138.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1773bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8683:607..4639- (Ectocarpus species13 EcNAP12_S_4_19m)
GCGAACCTCGTGGCGGTGTCTGTGGAGGACTGCGACGTGTGCGACGACGT
GTCCTTCGTTCCGCTGTGCTACATGGACGATGAATTGGCGTCGAGCGAGG
CTGACTGCCTGTCGTGCCGATACTCTTATAGCACCGAGTTCTACAACCTC
AAGGCAAGGGATGGAGCTTGCATCGACAACTCTCAGTACTCCATCCTGGC
CGGGGTGTGCTTCACCATACCCTTCGCCATCGCGACGCTGTTCGCCGGCC
GGTTGACCGACACGTTGAACAGGCGGCTTTTGCACACAGGGGCTATCCTG
GTGTGGTCTCTGGCAGCCGCGGCGCACGGCGTGTGCGAGGACTTCTCGTG
CCTAATGGTATCGCAAATCGTCCTGGGGATTGGCGAGGCCTTCAACGCTC
CCGCGTGCTACGCGATGATCACGCTCTACTTCCCCCACTCCAAGAGGGCC
ACGGCGAACGGCATCTACTCCTCGGGCACCTACCTGGGCTCCGCCATGTC
GAGCCTCTGCCTCGCCCTCGCCGTGCTGCTCGGGTGGCGAAACACGGCCT
TCTTGGCCGGGGCGTTCGGGGTCCTCGCCGGGGCTGTGCTCTTCTTCACG
GTGGAGCACAACCCGGTAATGCCGCCCTCCAACGACGGTTACACCAAGTT
GCCCGACGACGATGACGACGTTGGCGACGGCCTAGCCGAGGAACCATCGT
CGCTCCTGCCGCCACCGCCGTCGCACGAGACGTGCACGAAGCTCGAGCCG
CTGCTGCCTTCGGCCGCGATGGCCGGGGTGGGCCACCGCAAGGTCGTTAG
CTTCGGCGATAGCAACGGCAACGGAGGGGGTGCCGGCGGCGCGCGCGCCT
CGTACGGGGGTTGCGTGGGCGGGGAGACTAGGGCGGCCGACCCCGCCGTC
GGCAACGACAATGATAGGCAAGAGCTAGCCACAGCGGCAGCGGAGGCTGG
GCGGAGAGAGTCGTGGTCGTCGGCGTCGTCGACTTCGTCCACGTCGTCGT
ACGAGTACGCCGGCAGCGGCGCCGGGGGCGGCGGCGGCGGCGGCGGCCCG
GCCTCCGCGGGAGGAGCGGTGGGCTCGAGTGGCAGCGGCGGCGACATCGC
GCCAGCGAGATGGGTGGCGCCGGGGGAGTCGCCCATCCGAGCGGCAGGCG
GAGGGAGGAGGACGATAAGGGCCAATGTTTCCGGTAGAAATCCTTTCGCC
AAGAGCGGCAACCCGTTCGCAGTGAGTCCCTCCGCCGCGGAGGGACAATG
GAGGGGCGGCGGGGCGGGCCGATGGGTAGACGGTGACGGAGCCGCCGGGT
GCGAGGAGGACCGGGGAGCACGAGGGGGAAGAGGGAGGGGGAACGGCATC
GGCAGGGGGGGGGGGGGGAGGGGGGGGGCTGGTAGATGCCAACCCATCGC
GGCAGGTGGTGCTGGCGCTAGCGACGCGCCGTACTCTGCAGCGCTCGTAG
CGGTAGGCGCGGGCTCGAAGGACCCCAACAACAGCAGCGGGGGGGGTTGG
TACGACGAAGAGGACCACGCTGCTGCTGCTGCTGGTGCGGCGGCGGCTCC
CCCCGCGGGGGGGGGAGGGACATGGAAGGATGTCGAGGACAGCGGACCTC
AGAGGGGAGGGGGCGGAGGTGGGGGGGGGGGGGGGGGGGGGGGGGGTCTG
GGGAAGCATGATCTGGGCCAGGCGTTAAGGATGATCGTTTCGAACCGCGT
GGTGCTTGTGCTGTTCGCGGCGTCCTCGGCTAGGATGATCGGTACCTGGG
CCTCGGCCGGGTACATGGCGGTG
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