prot_Ecto-sp13_S_contig12425.2013.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig12425.2013.1
Unique Name	prot_Ecto-sp13_S_contig12425.2013.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	152

Homology

[Close]

BLAST of mRNA_Ecto-sp13_S_contig12425.2013.1 vs. uniprot
Match: D8LDP8_ECTSI (ARC5, dynamin-related protein involved in plastid division n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDP8_ECTSI)

HSP 1 Score: 184 bits (468), Expect = 3.300e-51
Identity = 89/90 (98.89%), Postives = 90/90 (100.00%), Query Frame = 0

Query:   63 EVGGGTKTRRPIALRMQYNPDCDQPRCYLALEDGKEEPRSLQEIQAYIESENRRLERDPVRSFDSREINIRMEYRFCPNMILIDTPGLIH 152
            +VGGGTKTRRPIALRMQYNPDCDQPRCYLALEDGKEEPRSLQEIQAYIESENRRLERDPVRSFDSREINIRMEYRFCPNMILIDTPGLIH
Sbjct:  147 QVGGGTKTRRPIALRMQYNPDCDQPRCYLALEDGKEEPRSLQEIQAYIESENRRLERDPVRSFDSREINIRMEYRFCPNMILIDTPGLIH 236

[Close]

BLAST of mRNA_Ecto-sp13_S_contig12425.2013.1 vs. uniprot
Match: A0A835YPI8_9STRA (Dynamin-type G domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPI8_9STRA)

HSP 1 Score: 168 bits (425), Expect = 1.940e-45
Identity = 79/89 (88.76%), Postives = 86/89 (96.63%), Query Frame = 0

Query:   63 EVGGGTKTRRPIALRMQYNPDCDQPRCYLALEDGKEEPRSLQEIQAYIESENRRLERDPVRSFDSREINIRMEYRFCPNMILIDTPGLI 151
            +VGGGTKTRRPIALRMQYNPDCDQPRCYL LE+G+EEPRSL EIQAYIE+EN+RLERDP+RSFD+REI IRMEYRFCPNMILIDTPGLI
Sbjct:  132 QVGGGTKTRRPIALRMQYNPDCDQPRCYLTLENGREEPRSLSEIQAYIEAENKRLERDPIRSFDAREIMIRMEYRFCPNMILIDTPGLI 220

[Close]

BLAST of mRNA_Ecto-sp13_S_contig12425.2013.1 vs. uniprot
Match: A0A835Z9B7_9STRA (Dynamin-type G domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9B7_9STRA)

HSP 1 Score: 167 bits (424), Expect = 2.790e-45
Identity = 79/89 (88.76%), Postives = 86/89 (96.63%), Query Frame = 0

Query:   63 EVGGGTKTRRPIALRMQYNPDCDQPRCYLALEDGKEEPRSLQEIQAYIESENRRLERDPVRSFDSREINIRMEYRFCPNMILIDTPGLI 151
            +VGGGTKTRRPIALRMQYNPDCDQPRCYL LE+G+EEPRSL EIQAYIE+EN+RLERDP+RSFD+REI IRMEYRFCPNMILIDTPGLI
Sbjct:  125 QVGGGTKTRRPIALRMQYNPDCDQPRCYLTLENGREEPRSLAEIQAYIEAENKRLERDPIRSFDAREIMIRMEYRFCPNMILIDTPGLI 213

[Close]

BLAST of mRNA_Ecto-sp13_S_contig12425.2013.1 vs. uniprot
Match: A0A7S4SQ20_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4SQ20_9STRA)

HSP 1 Score: 149 bits (375), Expect = 1.320e-43
Identity = 70/89 (78.65%), Postives = 79/89 (88.76%), Query Frame = 0

Query:   63 EVGGGTKTRRPIALRMQYNPDCDQPRCYLALEDGKEEPRSLQEIQAYIESENRRLERDPVRSFDSREINIRMEYRFCPNMILIDTPGLI 151
            +VGGGTKTRRP++LRMQYNP C  P+C+L  EDG E P+SL +IQ YIESENRRLERDPVRSFD REINIRMEY++CPNMILIDTPGLI
Sbjct:   18 QVGGGTKTRRPVSLRMQYNPRCTHPKCFLQGEDGIERPKSLTDIQEYIESENRRLERDPVRSFDPREINIRMEYKYCPNMILIDTPGLI 106

[Close]

BLAST of mRNA_Ecto-sp13_S_contig12425.2013.1 vs. uniprot
Match: A0A7S2PD63_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PD63_9STRA)

HSP 1 Score: 150 bits (378), Expect = 7.850e-43
Identity = 70/89 (78.65%), Postives = 80/89 (89.89%), Query Frame = 0

Query:   63 EVGGGTKTRRPIALRMQYNPDCDQPRCYLALEDGKEEPRSLQEIQAYIESENRRLERDPVRSFDSREINIRMEYRFCPNMILIDTPGLI 151
            +VGGGTKTRRP+ALRMQYNP C  PRC+L  +DG E P+SL EIQ YIE+ENRRLE+DPVRSFDSREIN+RMEY++CPNMILIDTPGLI
Sbjct:   80 QVGGGTKTRRPVALRMQYNPRCAHPRCFLQGDDGIERPKSLTEIQEYIEAENRRLEKDPVRSFDSREINVRMEYKYCPNMILIDTPGLI 168

[Close]

BLAST of mRNA_Ecto-sp13_S_contig12425.2013.1 vs. uniprot
Match: A0A7R9UE33_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UE33_9STRA)

HSP 1 Score: 147 bits (370), Expect = 5.100e-41
Identity = 70/89 (78.65%), Postives = 80/89 (89.89%), Query Frame = 0

Query:   63 EVGGGTKTRRPIALRMQYNPDCDQPRCYLALEDGKEEPRSLQEIQAYIESENRRLERDPVRSFDSREINIRMEYRFCPNMILIDTPGLI 151
            +VGGGTKTRRPIALRMQYNP C QP C+L  E G+EE RSLQEIQAYIE+EN+RLERDPVR FDSREI +RMEY++CPNMI+IDTPGL+
Sbjct:   16 QVGGGTKTRRPIALRMQYNPRCAQPVCFLTTEAGQEERRSLQEIQAYIEAENQRLERDPVRCFDSREIVVRMEYKYCPNMIIIDTPGLL 104

[Close]

BLAST of mRNA_Ecto-sp13_S_contig12425.2013.1 vs. uniprot
Match: A0A482SB77_9ARCH (Dynamin-type G domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SB77_9ARCH)

HSP 1 Score: 149 bits (375), Expect = 1.500e-39
Identity = 68/89 (76.40%), Postives = 81/89 (91.01%), Query Frame = 0

Query:   64 VGGGTKTRRPIALRMQYNPDCDQPRCYLALEDGKEEPRSLQEIQAYIESENRRLERDPVRSFDSREINIRMEYRFCPNMILIDTPGLIH 152
            +GGGTKTRRP+ALRMQYNP+C +P C+L LE+GKEE RSL +IQ+YIE EN+RLERD  RSFDSREINIRMEY++CPNMI+IDTPG+IH
Sbjct:    1 MGGGTKTRRPVALRMQYNPNCHEPLCFLTLENGKEEQRSLTDIQSYIELENKRLERDATRSFDSREINIRMEYKYCPNMIVIDTPGMIH 89

[Close]

BLAST of mRNA_Ecto-sp13_S_contig12425.2013.1 vs. uniprot
Match: B8C5C4_THAPS (Dynamin-type G domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C5C4_THAPS)

HSP 1 Score: 149 bits (375), Expect = 7.200e-39
Identity = 69/89 (77.53%), Postives = 79/89 (88.76%), Query Frame = 0

Query:   63 EVGGGTKTRRPIALRMQYNPDCDQPRCYLALEDGKEEPRSLQEIQAYIESENRRLERDPVRSFDSREINIRMEYRFCPNMILIDTPGLI 151
            +VGGGTKTRRP+ALRMQYNP C  PRC+L  +DG E P+SL EIQ YIESEN+RLE+DPVRSFD REIN+RMEY++CPNMILIDTPGLI
Sbjct:   52 QVGGGTKTRRPVALRMQYNPRCSHPRCFLQGDDGIERPKSLTEIQEYIESENKRLEKDPVRSFDPREINVRMEYKYCPNMILIDTPGLI 140

[Close]

BLAST of mRNA_Ecto-sp13_S_contig12425.2013.1 vs. uniprot
Match: K0SNP3_THAOC (Dynamin-type G domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SNP3_THAOC)

HSP 1 Score: 147 bits (371), Expect = 3.770e-38
Identity = 70/89 (78.65%), Postives = 78/89 (87.64%), Query Frame = 0

Query:   63 EVGGGTKTRRPIALRMQYNPDCDQPRCYLALEDGKEEPRSLQEIQAYIESENRRLERDPVRSFDSREINIRMEYRFCPNMILIDTPGLI 151
            +VGGGTKTRRP+ALRMQYNP C  PRC+L  +DG E P SL EIQ +IE+ENRRLE+DPVRSFDSREIN+RMEYR CPNMILIDTPGLI
Sbjct:  387 QVGGGTKTRRPVALRMQYNPRCSSPRCFLQGDDGVERPMSLVEIQEHIEAENRRLEKDPVRSFDSREINVRMEYRHCPNMILIDTPGLI 475

[Close]

BLAST of mRNA_Ecto-sp13_S_contig12425.2013.1 vs. uniprot
Match: A0A7S2R4H5_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R4H5_9STRA)

HSP 1 Score: 147 bits (371), Expect = 3.840e-38
Identity = 69/89 (77.53%), Postives = 77/89 (86.52%), Query Frame = 0

Query:   63 EVGGGTKTRRPIALRMQYNPDCDQPRCYLALEDGKEEPRSLQEIQAYIESENRRLERDPVRSFDSREINIRMEYRFCPNMILIDTPGLI 151
            +VGGGTKTRRPIALRMQYNP C +P C+L  +DG E P+SL EIQ YI  EN RLERDPVRSFDSREIN+RMEY++CPNMILIDTPGLI
Sbjct:  224 QVGGGTKTRRPIALRMQYNPRCSEPNCFLQGDDGTERPKSLAEIQEYINDENTRLERDPVRSFDSREINVRMEYKYCPNMILIDTPGLI 312

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig12425.2013.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig12425.2013.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LDP8_ECTSI	3.300e-51	98.89	ARC5, dynamin-related protein involved in plastid ...	[more]
A0A835YPI8_9STRA	1.940e-45	88.76	Dynamin-type G domain-containing protein n=1 Tax=T...	[more]
A0A835Z9B7_9STRA	2.790e-45	88.76	Dynamin-type G domain-containing protein n=1 Tax=T...	[more]
A0A7S4SQ20_9STRA	1.320e-43	78.65	Hypothetical protein (Fragment) n=1 Tax=Ditylum br...	[more]
A0A7S2PD63_9STRA	7.850e-43	78.65	Hypothetical protein (Fragment) n=1 Tax=Skeletonem...	[more]
A0A7R9UE33_9STRA	5.100e-41	78.65	Hypothetical protein (Fragment) n=1 Tax=Pinguiococ...	[more]
A0A482SB77_9ARCH	1.500e-39	76.40	Dynamin-type G domain-containing protein (Fragment...	[more]
B8C5C4_THAPS	7.200e-39	77.53	Dynamin-type G domain-containing protein (Fragment...	[more]
K0SNP3_THAOC	3.770e-38	78.65	Dynamin-type G domain-containing protein n=1 Tax=T...	[more]
A0A7S2R4H5_9STRA	3.840e-38	77.53	Hypothetical protein n=1 Tax=Eucampia antarctica T...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.300		coord: 59..152 e-value: 1.2E-16 score: 62.6
None	No IPR available	PANTHER	PTHR11566:SF78	DYNAMIN-LIKE PROTEIN B	coord: 63..151
IPR022812	Dynamin superfamily	PFAM	PF00350	Dynamin_N	coord: 65..151 e-value: 1.7E-8 score: 34.7
IPR022812	Dynamin superfamily	PANTHER	PTHR11566	DYNAMIN	coord: 63..151
IPR030381	Dynamin-type guanine nucleotide-binding (G) domain	PROSITE	PS51718	G_DYNAMIN_2	coord: 28..152 score: 16.02
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 63..152

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig12425	contig	Ecto-sp13_S_contig12425:827..5048 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig12425.2013.1	mRNA_Ecto-sp13_S_contig12425.2013.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig12425 827..5050 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig12425.2013.1 ID=prot_Ecto-sp13_S_contig12425.2013.1|Name=mRNA_Ecto-sp13_S_contig12425.2013.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=152bp
ATPGRCGRRGRGQEQQQEEAGRQACPEGDSVRCVQHAAHAGTGLSQAVRL
SGGARRGPPDQREVGGGTKTRRPIALRMQYNPDCDQPRCYLALEDGKEEP
RSLQEIQAYIESENRRLERDPVRSFDSREINIRMEYRFCPNMILIDTPGL
IH

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR022812	Dynamin_SF
IPR030381	G_DYNAMIN_dom
IPR027417	P-loop_NTPase