prot_Ecto-sp13_S_contig868.20133.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig868.20133.1
Unique Nameprot_Ecto-sp13_S_contig868.20133.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length169
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig868.20133.1 vs. uniprot
Match: A0A6H5JMD5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JMD5_9PHAE)

HSP 1 Score: 320 bits (821), Expect = 1.430e-110
Identity = 163/168 (97.02%), Postives = 165/168 (98.21%), Query Frame = 0 
Query:    1 MFTLNANAPSFVPSNPVQQQMVRPIFNSGVPSCVLIIDSDEYRSEFLINTFNREAVADEDLFNPAVYPVSAADHEELAAAENFNREMAELEALEHQEELRSLLQARISALQQGTSGNQRPAKIASMNSAMFSGLSRGAPASGLKGKRFNPAKKCPHNINQPLETGRYY 168
            MFTLNANAPSFVPSNPV QQMVRPIFNSGVPSCVLI+DSDEYRSEFL+NTFNREAVADEDLFNPAVYPVSAADHEEL AAENFNREMAELEALEHQEELRSLLQARISALQQGTSG QRPAKIASMNSAMFSGLSRGAPASGLKGKRFNPAKKCPHNINQPLETGRYY
Sbjct:    1 MFTLNANAPSFVPSNPVHQQMVRPIFNSGVPSCVLILDSDEYRSEFLVNTFNREAVADEDLFNPAVYPVSAADHEELTAAENFNREMAELEALEHQEELRSLLQARISALQQGTSGKQRPAKIASMNSAMFSGLSRGAPASGLKGKRFNPAKKCPHNINQPLETGRYY 168
[Close]
BLAST of mRNA_Ecto-sp13_S_contig868.20133.1 vs. uniprot
Match: A0A835Z899_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z899_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 6.890e-7
Identity = 50/157 (31.85%), Postives = 66/157 (42.04%), Query Frame = 0 
Query:    4 LNANAPSFVPSNPVQQQMVRPIFNSGVPSCVLIIDSDEYRSEFLINTFNREAVADEDLFNPAVYPVSAADHEELAAAENFNREMAELEALEHQEELRSLLQARISALQQGT----SGNQRPAKIASMNSAMFSGLSRGAPASGLKGKRFNPAKKCPH 156
            LN NA  +VP          PIFN  + SCV++         F    F+R  V D DLFNPA +P+  AD  E+ A E  N E+A          L  LL  R+ AL++         Q PA  A         L  GA  +    +  N A++ PH
Sbjct:    2 LNPNAQEYVPP--------MPIFNGDLQSCVIL--------GFQGQMFDRNMVDDNDLFNPAAFPMQDADFLEIEATEEMNAELAXXXXXXXXXXLTELLHKRLEALRRARLRRFGAEQTPAPRAXXXXXXXXXL--GATDAVAVSRHANNARRAPH 140
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig868.20133.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JMD5_9PHAE1.430e-11097.02Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z899_9STRA6.890e-731.85Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 80..105

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig868contigEcto-sp13_S_contig868:11884..15200 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig868.20133.1mRNA_Ecto-sp13_S_contig868.20133.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig868 11884..17790 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig868.20133.1 ID=prot_Ecto-sp13_S_contig868.20133.1|Name=mRNA_Ecto-sp13_S_contig868.20133.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=169bp
MFTLNANAPSFVPSNPVQQQMVRPIFNSGVPSCVLIIDSDEYRSEFLINT
FNREAVADEDLFNPAVYPVSAADHEELAAAENFNREMAELEALEHQEELR
SLLQARISALQQGTSGNQRPAKIASMNSAMFSGLSRGAPASGLKGKRFNP
AKKCPHNINQPLETGRYY*
back to top