prot_Ecto-sp13_S_contig868.20132.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig868.20132.1
Unique Nameprot_Ecto-sp13_S_contig868.20132.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length202
Homology
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BLAST of mRNA_Ecto-sp13_S_contig868.20132.1 vs. uniprot
Match: D8LF29_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF29_ECTSI)

HSP 1 Score: 223 bits (569), Expect = 1.490e-71
Identity = 111/125 (88.80%), Postives = 113/125 (90.40%), Query Frame = 0 
Query:   77 HGHSLQDSQRVPPEPGGSNRCCGNIAHGLVATVREECSYNRDGDHGDVPVELPAASTTIVFAVNAGRPIPTRRFSDVVAAAEEHLRIDNRANEGRDQLQRPCVLAAFCDGSSIIYYTVSSGIDTS 201
            HG  LQDS RVPPEPGG+NRCCG IAHGLVATV EE + NRDGD GDVPVELPAASTTIVFAVNAGR IPTRRFSDVVAAAEE LRID RA EGRDQLQRPCVLAAFCDGSSIIYYTVSSGIDTS
Sbjct:   49 HGQPLQDSPRVPPEPGGNNRCCGKIAHGLVATVGEERNCNRDGDLGDVPVELPAASTTIVFAVNAGRTIPTRRFSDVVAAAEERLRIDFRATEGRDQLQRPCVLAAFCDGSSIIYYTVSSGIDTS 173
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig868.20132.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LF29_ECTSI1.490e-7188.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig868contigEcto-sp13_S_contig868:6100..9912 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig868.20132.1mRNA_Ecto-sp13_S_contig868.20132.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig868 6042..10566 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig868.20132.1 ID=prot_Ecto-sp13_S_contig868.20132.1|Name=mRNA_Ecto-sp13_S_contig868.20132.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=202bp
MRRPFSKKRGAIDRRVSEITNHAPRRLLIPARSTSYRLSYGSGRGRGLKR
GRTTQSRWPHEENHCVTGKTRRCSPCHGHSLQDSQRVPPEPGGSNRCCGN
IAHGLVATVREECSYNRDGDHGDVPVELPAASTTIVFAVNAGRPIPTRRF
SDVVAAAEEHLRIDNRANEGRDQLQRPCVLAAFCDGSSIIYYTVSSGIDT
S*
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