mRNA_Ecto-sp13_S_contig8678.20128.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8678.20128.1 vs. uniprot
Match: D8LDE1_ECTSI (TLC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDE1_ECTSI) HSP 1 Score: 371 bits (952), Expect = 1.160e-124 Identity = 199/225 (88.44%), Postives = 203/225 (90.22%), Query Frame = 1
Query: 1 RINSTIHAGLVCTLVTICLLTMSFDPVTLVPLGSTVLLEITFSISIGYFLFDLSVILWWMLPMWTVFVAHHVVALTPYVITQFFYTCHQGQYVLLLFLLVEASTMPLNAMAFLEDLGRRRTPEHRYAHGAMYSLWFVFRILLPLYLLLLIWTKIAQNISTEEACLVPSMVCAHIIVVFCVGVFFFLLTPEVYS*DK*IDRWIDPRCDE------SVLPRAIDLKG 657
RINSTIHAGLVCTLVTICLLTMSFDPVTLVPLGSTVLLEITFSISIGYFLFDLSVILWWMLPMWTVFVAHHVVALTPYVITQFFYTCHQGQYVLLLFLLVEASTMPLNAMAFLEDLGRRRTPEHR AHGAMYSLWFVFRILLPLYLLLLIWTKIAQNISTEEACLVPSMVCAHII VFC+GVFFFLLTPEVY K D+ DP D S P A++L G
Sbjct: 56 RINSTIHAGLVCTLVTICLLTMSFDPVTLVPLGSTVLLEITFSISIGYFLFDLSVILWWMLPMWTVFVAHHVVALTPYVITQFFYTCHQGQYVLLLFLLVEASTMPLNAMAFLEDLGRRRTPEHRIAHGAMYSLWFVFRILLPLYLLLLIWTKIAQNISTEEACLVPSMVCAHIIAVFCIGVFFFLLTPEVYCRIKYGDK-DDPNVDTTSVGAASSAPGAMELGG 279
BLAST of mRNA_Ecto-sp13_S_contig8678.20128.1 vs. uniprot
Match: K3W7E3_GLOUD (TLC domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W7E3_GLOUD) HSP 1 Score: 155 bits (393), Expect = 5.400e-41 Identity = 94/229 (41.05%), Postives = 130/229 (56.77%), Query Frame = 1
Query: 1 RINSTIHAGLVCTLVTICLLTMSFDPVTLVPLGSTVLLEITFSISIGYFLFDLSVILWWMLPMWTVFVAHHVVALTPYVITQFFYTCHQGQYVLLLFLLVEASTMPLNAMAFLEDLGRRRTPEHRYAHGAMYSLWFVFRILLPLYLLLLIWTKIAQNISTEEACLVPSMVCAHIIVVFCVGVFFFLLTPEVYS*DK*IDRWIDP--RCDE----------SVLPRAIDL 651
R+NSTIHA ++ + +L +D L+PL ST FS S GYFLFDL V++ W +P+W VFV HH+VA PY+I F C Y+L LFLLVE + +PLN FLE LG +TP H+ + Y WF R++LPLY + ++W +I S C++P+ VC H+I FCVGVF F+ TP+V + +W P + DE ++ PRA L
Sbjct: 51 RVNSTIHAVIIVVGMLTTVLRQQWDE-DLMPLRSTTAATALFSFSCGYFLFDLYVLVRWQVPLWRVFVIHHIVAAVPYLIYNFHAGCGMDFYLLSLFLLVELAVIPLNITTFLEQLGYGKTPVHQLFFFSTYVFWFGARVVLPLYNVYVLWERIIPESSDAPFCVIPAAVCGHLIAAFCVGVFVFVWTPDVLA------KWRAPVIQLDEYSDYELTLRTNITPRASPL 272
BLAST of mRNA_Ecto-sp13_S_contig8678.20128.1 vs. uniprot
Match: A0A3F2RIU2_9STRA (TLC domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RIU2_9STRA) HSP 1 Score: 149 bits (377), Expect = 1.580e-38 Identity = 82/193 (42.49%), Postives = 114/193 (59.07%), Query Frame = 1
Query: 1 RINSTIHAGLVCTLVTICLLTMSFDPVTLVPLGSTVLLEITFSISIGYFLFDLSVILWWMLPMWTVFVAHHVVALTPYVITQFFYTCHQGQYVLLLFLLVEASTMPLNAMAFLEDLGRRRTPEHRYAHGAMYSLWFVFRILLPLYLLLLIWTKIAQNISTEEACLVPSMVCAHIIVVFCVGVFFFLLTPEVYS 579
R+NS+IHA ++ + +D L+PL T FS S GYFLFDL V++ W +P+W VFV HH+VA+ PY+I C Y+L LFL+VE + +PLN FLE LG ++ H + Y+ WFV R+LLPLY + ++WTK+ + C VP+ C HII FCVGVF F+ TP+V +
Sbjct: 50 RVNSSIHAVVIVAGMAYTFAHQKWDD-DLLPLNDTHFTSTLFSFSCGYFLFDLFVLVLWQVPLWRVFVVHHIVAVVPYLIYTMHSGCGMDLYLLQLFLMVEFAVIPLNIATFLEQLGYGKSKLHSFFFYTTYACWFVARVLLPLYNVYVLWTKVIPDAGAAPFCTVPAAFCGHIIAAFCVGVFIFVWTPDVLA 241
BLAST of mRNA_Ecto-sp13_S_contig8678.20128.1 vs. uniprot
Match: A0A1V9ZF67_9STRA (TLC domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZF67_9STRA) HSP 1 Score: 149 bits (376), Expect = 1.860e-38 Identity = 88/193 (45.60%), Postives = 119/193 (61.66%), Query Frame = 1
Query: 1 RINSTIHAGLVCTLVTICLLTMSFDPVTLVPLGSTVLLEITFSISIGYFLFDLSVILWWMLPMWTVFVAHHVVALTPYVITQFFYTCHQGQYVLLLFLLVEASTMPLNAMAFLEDLGRRRTPEHRYAHGAMYSLWFVFRILLPLYLLLLIWTKIAQNISTEEACLVPSMVCAHIIVVFCVGVFFFLLTPEVYS 579
RINSTIHA ++ V ++ + +D L P S FSI+IGYFL DL V+L W + M VFV HH+VA+ PY+I F C Q+ LLLFLLVE +T+PLNA F+E +GR +P+H + A Y W V R LLP+YLL + W+ ++ C P+++CAHII FCVGVF F+ TPE+ +
Sbjct: 59 RINSTIHAVVIVIGVLYAIIVIDWDKDYL-PTSSIQPACTAFSIAIGYFLCDLIVVLAWPVQMQYVFVIHHIVAVIPYIINNFVSACTGCQFGLLLFLLVEIATLPLNARGFMESMGRANSPQHTRSIYATYVTWAVTRTLLPVYLLYVFWSFSYPADKDDDVCFYPNLICAHIIAAFCVGVFCFVHTPEIVA 250
BLAST of mRNA_Ecto-sp13_S_contig8678.20128.1 vs. uniprot
Match: A0A067BSF7_SAPPC (TLC domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BSF7_SAPPC) HSP 1 Score: 149 bits (376), Expect = 1.910e-38 Identity = 88/191 (46.07%), Postives = 117/191 (61.26%), Query Frame = 1
Query: 1 RINSTIHAGLVCTLVTICLLTMSFDPVTLVPLGSTVLLEITFSISIGYFLFDLSVILWWMLPMWTVFVAHHVVALTPYVITQFFYTCHQGQYVLLLFLLVEASTMPLNAMAFLEDLGRRRTPEHRYAHGAMYSLWFVFRILLPLYLLLLIWTKIAQNISTEEACLVPSMVCAHIIVVFCVGVFFFLLTPEV 573
RINSTIHA ++ V + + +D L P+ S FSI+IGYFLFDL V++ W +PM VFV HH+VA+ PY+I F C Q+ LLLFLLVE +T+PLNA F+E +GR + H + A Y W V R LLP+YLL + W+ + C P+++CAHII FCVGVF F+ TPE+
Sbjct: 60 RINSTIHAIVIVAGVVYAICVIDWDKDYL-PMSSIQPACTVFSIAIGYFLFDLIVVIAWPVPMQWVFVIHHIVAVVPYIINNFVSACTGCQFGLLLFLLVEIATLPLNARGFMESMGRHDSLSHTRSIYATYVTWAVTRTLLPVYLLYVFWSFSYPADKDDNVCFYPNLICAHIIAAFCVGVFCFVHTPEI 249
BLAST of mRNA_Ecto-sp13_S_contig8678.20128.1 vs. uniprot
Match: H3H5E5_PHYRM (TLC domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H5E5_PHYRM) HSP 1 Score: 149 bits (376), Expect = 2.380e-38 Identity = 85/195 (43.59%), Postives = 117/195 (60.00%), Query Frame = 1
Query: 1 RINSTIHAGLVCTLVTICLLTMSFDPVTLVPLGSTVLLEIT--FSISIGYFLFDLSVILWWMLPMWTVFVAHHVVALTPYVITQFFYTCHQGQYVLLLFLLVEASTMPLNAMAFLEDLGRRRTPEHRYAHGAMYSLWFVFRILLPLYLLLLIWTKIAQNISTEEACLVPSMVCAHIIVVFCVGVFFFLLTPEVYS 579
R+NSTIHA ++ T + + +D L+PL T + T FS S GYFLFDL V++ W +PMW VFV HHVVA PY+I C Y+L LFL+VE + +PLN F+E LG +T H++ Y WF+ R++LP+Y + ++WTKI + C VP+ C HII FCVGVF F+ TP+V +
Sbjct: 50 RVNSTIHALVIVTGMGYSFMQQQWDE-DLLPLKDTPMYLATTLFSFSCGYFLFDLFVLVLWQVPMWRVFVIHHVVAALPYLIYTMHAGCGMDLYLLQLFLMVEFAVIPLNITTFMEQLGYGKTKTHKFFFYTTYLFWFLARVILPIYNVYVLWTKIIPDAGAAPLCTVPAAFCGHIICAFCVGVFVFVWTPDVLA 243
BLAST of mRNA_Ecto-sp13_S_contig8678.20128.1 vs. uniprot
Match: A0A8K1FIF5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FIF5_PYTOL) HSP 1 Score: 147 bits (372), Expect = 5.130e-38 Identity = 87/229 (37.99%), Postives = 128/229 (55.90%), Query Frame = 1
Query: 1 RINSTIHAGLVCTLVTICLLTMSFDPVTLVPLGSTVLLEITFSISIGYFLFDLSVILWWMLPMWTVFVAHHVVALTPYVITQFFYTCHQGQYVLLLFLLVEASTMPLNAMAFLEDLGRRRTPEHRYAHGAMYSLWFVFRILLPLYLLLLIWTKIAQNISTEEACLVPSMVCAHIIVVFCVGVFFFLLTPEVYS*DK*IDRWIDP------------RCDESVLPRAIDL 651
R+NSTIH+ ++ + LL+ +D + PL T + ++ FS S GYF+ DL V++ W +PMW VFV HH+VA TPY+I F+ C Y+L LFLLVE + +PLN F+E LG +T H Y WF R++LPLY + ++W + S C++PS +C H+I FCVGVF F+ TP++ + +W DP +S+ PRA +
Sbjct: 48 RVNSTIHSFVIVPGMLYTLLSQEWDAAYM-PLLPTDVAQMFFSFSCGYFIADLYVLVCWQVPMWRVFVIHHLVAATPYLIFNFYPGCGMDFYLLTLFLLVEIAVVPLNIATFVEQLGYGKTRLHTLLFYMTYVCWFGARVVLPLYNVYILWWVLIPQASDAPLCIIPSAICGHLIAAFCVGVFVFVWTPDMLA------KWRDPVILLDEYPDYKLTLRQSITPRASPI 269
BLAST of mRNA_Ecto-sp13_S_contig8678.20128.1 vs. uniprot
Match: W2N5N5_PHYPR (TLC domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=W2N5N5_PHYPR) HSP 1 Score: 147 bits (371), Expect = 1.270e-37 Identity = 86/201 (42.79%), Postives = 118/201 (58.71%), Query Frame = 1
Query: 1 RINSTIHAGLVCTLVTICLLTMSFD----PVTLVPLGSTVLLEITFSISIGYFLFDLSVILWWMLPMWTVFVAHHVVALTPYVITQFFYTCHQG----QYVLLLFLLVEASTMPLNAMAFLEDLGRRRTPEHRYAHGAMYSLWFVFRILLPLYLLLLIWTKIAQNISTEEACLVPSMVCAHIIVVFCVGVFFFLLTPEVYS 579
R+NSTIHA ++ T +T + +D P P+ L I FS S GYFLFDL V++ W +P+W VFV HH+VA PY+I YT H G Y+L LFL+VE + +PLN F+E LG ++ H + Y WFV R+LLP+Y + ++WTKI + C VP+ C HII FC+GVF F+ TP+V +
Sbjct: 50 RVNSTIHALVIATGMTYSFMQQQWDADLLPTKEAPME---LATILFSFSCGYFLFDLFVLVLWQVPLWRVFVIHHIVAALPYMI----YTTHAGCGMDLYLLQLFLMVEFAVIPLNITTFMEQLGYGKSKTHEFFFYMTYVFWFVARVLLPIYNVYVLWTKIIPDAGAAPLCTVPAAFCGHIIAAFCIGVFIFVWTPDVLA 243
BLAST of mRNA_Ecto-sp13_S_contig8678.20128.1 vs. uniprot
Match: A0A2D4CCG7_PYTIN (TLC domain-containing protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CCG7_PYTIN) HSP 1 Score: 146 bits (369), Expect = 1.330e-37 Identity = 86/209 (41.15%), Postives = 121/209 (57.89%), Query Frame = 1
Query: 1 RINSTIHA-----GLVCTLVTICLLTMSFDPVTLVPLGSTVLLEITFSISIGYFLFDLSVILWWMLPMWTVFVAHHVVALTPYVITQFFYTCHQGQYVLLLFLLVEASTMPLNAMAFLEDLGRRRTPEHRYAHGAMYSLWFVFRILLPLYLLLLIWTKIAQNISTEEACLVPSMVCAHIIVVFCVGVFFFLLTPEVYS*DK*IDRWIDP 612
R+NST HA G++C+L +D L P ST L FS S GYF+FDL V++ W +P+W VFV HH+VA+ PY+I F+ C Y+L LFLLVE + +PLN FLE LG +T H Y WF R++LPLY + ++W + +S+ C++PS +C H+I FCVGVF F+ TP++ + RW +P
Sbjct: 46 RVNSTFHALTIVPGILCSLYL-----QQWDNEYL-PQRSTDLARTLFSYSCGYFIFDLYVLVRWQVPLWRVFVVHHIVAVIPYLIYNFYPGCGMDLYLLTLFLLVELAVIPLNITMFLEQLGFGKTRVHTIFFYITYVCWFGARVVLPLYNVYVLWWMVMPYLSSVPFCIIPSAICGHLIAAFCVGVFIFIWTPDMLA------RWREP 242
BLAST of mRNA_Ecto-sp13_S_contig8678.20128.1 vs. uniprot
Match: A0A484DRY6_BRELC (TLC domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DRY6_BRELC) HSP 1 Score: 147 bits (370), Expect = 2.720e-37 Identity = 85/197 (43.15%), Postives = 116/197 (58.88%), Query Frame = 1
Query: 1 RINSTIHAGLVCTLVTICLLTMSFD----PVTLVPLGSTVLLEITFSISIGYFLFDLSVILWWMLPMWTVFVAHHVVALTPYVITQFFYTCHQGQYVLLLFLLVEASTMPLNAMAFLEDLGRRRTPEHRYAHGAMYSLWFVFRILLPLYLLLLIWTKIAQNISTEEACLVPSMVCAHIIVVFCVGVFFFLLTPEVYS 579
R+NSTIHA +V T +T + +D P +PL L FS S GYFLFDL V++ W +P+W VFV HHVVA+ PY+I C Y+L LFL+VE + +PLN LE LG ++ H + Y WFV R+LLP+Y + ++WTK+ + + C VP+ C HII FCVGVF F+ TP+V +
Sbjct: 68 RVNSTIHALVVATGMTYSFVQQKWDAHFLPTQEMPLQ---LAHTLFSFSCGYFLFDLVVLVLWQVPLWRVFVIHHVVAVLPYLIYTMHAGCGMDLYLLQLFLMVEFAVIPLNITTVLEQLGYGQSKTHEFFFYTTYLFWFVARVLLPIYNVYVLWTKVIPDAAVAPICTVPAAFCGHIIAAFCVGVFVFVWTPDVLA 261 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8678.20128.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8678.20128.1 >prot_Ecto-sp13_S_contig8678.20128.1 ID=prot_Ecto-sp13_S_contig8678.20128.1|Name=mRNA_Ecto-sp13_S_contig8678.20128.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=173bp MSFDPVTLVPLGSTVLLEITFSISIGYFLFDLSVILWWMLPMWTVFVAHHback to top mRNA from alignment at Ecto-sp13_S_contig8678:516..3511+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8678.20128.1 ID=mRNA_Ecto-sp13_S_contig8678.20128.1|Name=mRNA_Ecto-sp13_S_contig8678.20128.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2996bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8678:516..3511+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8678:516..3511+ >mRNA_Ecto-sp13_S_contig8678.20128.1 ID=mRNA_Ecto-sp13_S_contig8678.20128.1|Name=mRNA_Ecto-sp13_S_contig8678.20128.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=519bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8678:516..3511+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |