mRNA_Ecto-sp13_S_contig8677.20127.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig8677.20127.1
Unique NamemRNA_Ecto-sp13_S_contig8677.20127.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig8677.20127.1 vs. uniprot
Match: D7FZF9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZF9_ECTSI)

HSP 1 Score: 590 bits (1522), Expect = 1.010e-207
Identity = 345/369 (93.50%), Postives = 354/369 (95.93%), Query Frame = 1
Query:   31 SYLSAISEVIVDPAMECEGMANNDMGEARMDIIDSEINHLGHYESESYGIAYKVRGFCTDLSNPELFETVGVTGDILGSHIHHLYFGHYSYGHQGGNWSYNTVHDNVGYGFDPHDDSDYVTISNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHVTDAGKMTGNGIMLHRSCDYATVRGNVVENSMDSGVAVYESSNCEISQNNLSRNKNGIRMSMGSSDNLAFENHIVINGEDEKYAIYLYRGNDTPAVEGSDGRPRNNRIFDNSLMSDNAVVMVRNSDDNIIEGNTIFGRESRFVDSFNTLWYGNSVPDVHEFKLEDDSCFDPESDMDYVAGEAGGGEXXXXXXXXXXXXXXXXXXXEEGFFCGV 1137
            SYLSAISEVI++PAMECEGMA NDMGEARMDIIDSEINHLGHYESESYGIAYKVRGFC DLSNPELFETVGVTGDILGSHIHHLYFGHYSYGHQGGNWSYNTVHDNVGYGFDPHDDSDYVTISNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHVTDAGK+TGNGIMLH          NVVEN+MDSGVAVYESSNCEISQNNLSRNKNGIRMSMGS++NLAFENHIVINGEDE+YAIYLYRGNDTPAVEGSDGRPRNNR+FDNSLMSDNAVVM RN+DDNIIEGNTIFGRESRFVDSFNTLWYGNSVPDVHEFKLED SCFDPESDMDYVAGEAGGG XXXXXXXXXXXXXXXXXXXEEGFFCGV
Sbjct:  184 SYLSAISEVIINPAMECEGMATNDMGEARMDIIDSEINHLGHYESESYGIAYKVRGFCNDLSNPELFETVGVTGDILGSHIHHLYFGHYSYGHQGGNWSYNTVHDNVGYGFDPHDDSDYVTISNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHVTDAGKITGNGIMLHXXXXXXXXXXNVVENNMDSGVAVYESSNCEISQNNLSRNKNGIRMSMGSANNLAFENHIVINGEDERYAIYLYRGNDTPAVEGSDGRPRNNRVFDNSLMSDNAVVMARNADDNIIEGNTIFGRESRFVDSFNTLWYGNSVPDVHEFKLEDGSCFDPESDMDYVAGEAGGGXXXXXXXXXXXXXXXXXXXXEEGFFCGV 552          
BLAST of mRNA_Ecto-sp13_S_contig8677.20127.1 vs. uniprot
Match: D7FZF8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZF8_ECTSI)

HSP 1 Score: 404 bits (1039), Expect = 1.890e-134
Identity = 235/333 (70.57%), Postives = 264/333 (79.28%), Query Frame = 1
Query:   31 SYLSAISEVIVDPAMECEGMANNDMGEARMDIIDSEINHLGHYESESYGIAYKVRGFCTDLSNPELFETVGVTGDILGSHIHHLYFGHYSYGHQGGNWSYNTVHDNVGYGFDPHDDSDYVTISNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHVTDAGKMTGNGIMLHRSCDYATVRGNVVENSMDSGVAVYESSNCEISQNNLSRNKNGIRMSMGSSDNLAFENHIVINGEDEKYAIYLYRGNDTPAVEGSDGRPRNNRIFDNSLMSDNAVVMVRNSDDNIIEGNTIFGRESRFVDSFNTLWYGNSVPD-VHEFKLEDDSCFDPESDMD 1026
            SYLSAISEVI DPA  C+G A NDMGEARMDIIDSE+NHLG Y+SESYGIAYKVRGFC DLSNPELF++V VTGDILGS IH  YFGHYSYGHQGGNWS+N +H N+GYGFDPHDDSDY+TI NN  XXXXXXXXXXXXXXXXXXXXXXXXXXXGH+ +AG+ TGN                     MDSGVA+YESS C +S N +  NKNGIRMS+GSSDNL +EN I+ING D KYAIYLY+GND P V  SDGRPRNN IFDNSL+SDN VV + NSDD   EGN ++GR SRF DSFNTLW  N V D +H++KLE +SCFDPESD++
Sbjct:  192 SYLSAISEVITDPAETCDGTAKNDMGEARMDIIDSEVNHLGWYDSESYGIAYKVRGFCKDLSNPELFDSVSVTGDILGSDIHDNYFGHYSYGHQGGNWSHNKMHHNIGYGFDPHDDSDYITIHNNEVXXXXXXXXXXXXXXXXXXXXXXXXXXXGHINEAGQRTGNXXXXXXXXXXXXXXXXXXXXXMDSGVALYESSYCAVSDNKIYGNKNGIRMSLGSSDNLLYENDIIINGPDAKYAIYLYQGNDIPDV--SDGRPRNNHIFDNSLVSDNEVVKMLNSDDTAFEGNVVYGRVSRFKDSFNTLWKSNFVEDGIHDYKLELNSCFDPESDIE 522          
BLAST of mRNA_Ecto-sp13_S_contig8677.20127.1 vs. uniprot
Match: A0A6H5KBD3_9PHAE (MEP17 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBD3_9PHAE)

HSP 1 Score: 380 bits (977), Expect = 2.160e-125
Identity = 229/353 (64.87%), Postives = 261/353 (73.94%), Query Frame = 1
Query:   31 SYLSAISEVIVDPAMECEGMANNDMGEARMDIIDSEINH--------------------LGHYESESYGIAYKVRGFCTDLSNPELFETVGVTGDILGSHIHHLYFGHYSYGHQGGNWSYNTVHDNVGYGFDPHDDSDYVTISNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHVTDAGKMTGNGIMLHRSCDYATVRGNVVENSMDSGVAVYESSNCEISQNNLSRNKNGIRMSMGSSDNLAFENHIVINGEDEKYAIYLYRGNDTPAVEGSDGRPRNNRIFDNSLMSDNAVVMVRNSDDNIIEGNTIFGRESRFVDSFNTLWYGNSVPD-VHEFKLEDDSCFDPESDMD 1026
            SYLSAISEVI DP   C+G A NDMGEARMDIIDSE+N                     LG Y+SESYGI+YKVRGFCTDLSNPELF++V VTGDILGS IH  YFGHYSYGHQGGNWS+N +H N+GYGFDPHDDSDY+TI NN   XXXXXXXXXXXXXXXXXXXXXXXXXXGH+ +AG+ TGN                     MDSGVA+YESS C +S N +  +KNGIRMS+GSSDNL +EN I+ING D KYAIYLY+GND P V  SDGR RNN IFDNSL+SDN VV + NSDD   EGN ++GR SRF +SFNTLW  N V D +H++KLE +SCFDPESD++
Sbjct:  152 SYLSAISEVITDPTETCDGTAKNDMGEARMDIIDSEVNRTTQTSHSAPLTSRLPQYKTDLGWYDSESYGISYKVRGFCTDLSNPELFDSVSVTGDILGSDIHDNYFGHYSYGHQGGNWSHNKMHHNIGYGFDPHDDSDYLTIHNNEVYXXXXXXXXXXXXXXXXXXXXXXXXXXGHINEAGQRTGNXXXXXXXXXXXXXXXXXXXXXMDSGVALYESSYCAVSDNKIYGSKNGIRMSLGSSDNLLYENDIIINGPDAKYAIYLYQGNDIPDV--SDGRLRNNHIFDNSLVSDNQVVKMLNSDDTAFEGNVVYGRVSRFKNSFNTLWKSNFVEDGIHDYKLELNSCFDPESDIE 502          
BLAST of mRNA_Ecto-sp13_S_contig8677.20127.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI)

HSP 1 Score: 258 bits (658), Expect = 7.010e-78
Identity = 151/340 (44.41%), Postives = 199/340 (58.53%), Query Frame = 1
Query:   31 SYLSAISEVIVDPAMECEGMANNDMGEARMDIIDSEINHLGHYESESYGIAYKVRGFCTDLSNPELFETVGVTGDILGSHIHHLYFGHYSYGHQGGNWSYNTVHDNVGYGFDPHDDSDYVTISNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHVTDAGKMTGNGIMLHRSCDYATVRGNVVENSMDSGVAVYESSNCEISQNNLSRNKNGIRMSMGSSDNLAFENHIVINGEDEKYAIYLYRGNDTPAVEGSDGRPRNNRIFDNSLMSDNAVVMVRNSD-----DNIIEGNTIFGRESRFVDSFNTLWYGNSVPDVHEFKLE--DDSCFDPESDMDY 1029
            SY+SA+SE++ D    CEG A N MGEARMDI +SEI +LG  +SESYG+ +KVRGFC D SNPE+F+ V V G++  S IHHL FG Y+YGHQ G+W  N +HDN GYGFDPHDDSD++TI +N                             G+    G  T  GI LHRS D A V+GN V ++ D+G+A+ ES N ++S+N    NK G+RMS+G +DN+  EN I  N    KY  Y Y G+D P V  S GR +NN    NS       + ++ +D     DN+ E     G   RF D+ N++  GN+  D  +F+L+  +DSCFD ESD  Y
Sbjct:  180 SYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQ-------GNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNS---KYNAYTYLGSDEPDVVSS-GRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNTGLDEGDFELKVTNDSCFDGESDSGY 508          
BLAST of mRNA_Ecto-sp13_S_contig8677.20127.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI)

HSP 1 Score: 251 bits (640), Expect = 2.990e-75
Identity = 148/340 (43.53%), Postives = 195/340 (57.35%), Query Frame = 1
Query:   31 SYLSAISEVIVDPAMECEGMANNDMGEARMDIIDSEINHLGHYESESYGIAYKVRGFCTDLSNPELFETVGVTGDILGSHIHHLYFGHYSYGHQGGNWSYNTVHDNVGYGFDPHDDSDYVTISNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHVTDAGKMTGNGIMLHRSCDYATVRGNVVENSMDSGVAVYESSNCEISQNNLSRNKNGIRMSMGSSDNLAFENHIVINGEDEKYAIYLYRGNDTPAVEGSDGRPRNNRIFDNSLMSDNAVVMVRNSD-----DNIIEGNTIFGRESRFVDSFNTLWYGNSVPDVHEF--KLEDDSCFDPESDMDY 1029
            SY+SAISE+I D    CEG A N MGEARMDI  SEI +LG+++SESYG+ +KVRGFC D SNPE+F+ V V G++  S IHH+ FG Y+YGHQ G+W  N +HDN GYGFDPHDDSD++TI +N                             G+    G  T  GI LHRS D A V+GN V ++ D+G+A+ ES N ++S+N    NK G+R S+G +DN+   N I  N E   Y  Y Y G D P V  S GR +NN    NS       + ++ +D     DN+ E     G   RF ++   L  GN+  D  EF  K+++D+CFD E+D  Y
Sbjct:  176 SYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQ-------GNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAE---YNAYSYLGTDEPDVVSS-GRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACFDGEADSGY 504          
BLAST of mRNA_Ecto-sp13_S_contig8677.20127.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI)

HSP 1 Score: 239 bits (609), Expect = 1.690e-70
Identity = 138/314 (43.95%), Postives = 181/314 (57.64%), Query Frame = 1
Query:   31 SYLSAISEVIVDPAMECEGMANNDMGEARMDIIDSEINHLGHYESESYGIAYKVRGFCTDLSNPELFETVGVTGDILGSHIHHLYFGHYSYGHQGGNWSYNTVHDNVGYGFDPHDDSDYVTISNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHVTDAGKMTGNGIMLHRSCDYATVRGNVVENSMDSGVAVYESSNCEISQNNLSRNKNGIRMSMGSSDNLAFENHIVINGED-EKYAIYLYRGNDTPAVEGSDGRPRNNRIFDNSLMSDNAVVMVRNSDDNIIEGNTIFGR-ESRFVDSFNTLWYGNSVP 966
            S+L+ +SE +      C G A N+MGE RMDII+SEI +LG+++SESYG+ +KVRGFC DLSNP++F+T  V G+++GS IHH Y+G YSYGHQGG W  N +HDN  YGFDPHDDSDY+T                                   V D G     GI LHRS DYA V  NVV +  D+G+A+ ES N +I  N  S  K GIR+S+GSS+N   EN      ED     +Y Y+G+D P    SDGRP +N   +N +++    V ++  DD +I  N   G  E  F D+ NT W GN++P
Sbjct:  202 SFLNCVSEKLTGEV--CVGQAQNEMGECRMDIINSEIGYLGYFDSESYGLTWKVRGFCKDLSNPDVFDTTNVYGNLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLT------------------SIIASKRCNNVQIYNNEVYDGGPFAA-GIFLHRSSDYAIVHDNVVHDMQDAGMAMLESMNADIYNNRFSSVKFGIRLSLGSSENHVHENLF----EDVSTQGLYTYQGSDEPTDGVSDGRPSDNLFENNRILNVTKGVKIKEGDDTVITDNVFTGTSELEFFDAQNTRWKGNTLP 490          
BLAST of mRNA_Ecto-sp13_S_contig8677.20127.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI)

HSP 1 Score: 243 bits (621), Expect = 2.010e-69
Identity = 145/335 (43.28%), Postives = 194/335 (57.91%), Query Frame = 1
Query:   31 SYLSAISEVIVDPAMECEGMANNDMGEARMDIIDSEINHLGHYESESYGIAYKVRGFCTDLSNPELFETVGVTGDILGSHIHHLYFGHYSYGHQGGNWSYNTVHDNVGYGFDPHDDSDYVTISNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHVTDAGKMTGNGIMLHRSCDYATVRGNVVENSMDSGVAVYESSNCEISQNNLSRNKNGIRMSMGSSDNLAFENHIVINGEDEKYAIYLYRGNDTPAVEGSDGRPRNNRIFDNSLMSDNAVVMVRNSDDNIIEGNTIFGRES-RFVDSFNTLWYGNSVPDVHEFKLEDDSCFDPESDMDYV 1032
            S+L+ +SE +     +CEG A N+MGE RMDII+SEI +LG+++SESYG+ +KVRGFC DLSNPE+FE   V GD+ GS IHHLY+GHYSYGHQGG W+ N +HDN  YGFDPHDDSDY+TI+ N                               V D G     GI LHRS D A V  N + N  D+G+A+ ES + +I  N ++  K GIRMS+GS +N  ++N      +  +Y +Y Y G+D P V  SDGRP  N +  N +      V ++  DDN    NT    ++  F +S NT+W GN   D+ +  +E+D  FD  S  D +
Sbjct:  565 SFLNCVSEKLTGD--DCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFEN------EVRDGGAAAA-GIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFT---DISQYGLYTYEGSDEPDV--SDGRPSGNVLALNLVEDCPIGVKIKEGDDNEFYQNTFINVDAFEFPESTNTMWSGN---DIGDGCIEEDDEFDAASGSDSI 882          
BLAST of mRNA_Ecto-sp13_S_contig8677.20127.1 vs. uniprot
Match: D8LD45_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD45_ECTSI)

HSP 1 Score: 235 bits (600), Expect = 1.740e-68
Identity = 137/329 (41.64%), Postives = 191/329 (58.05%), Query Frame = 1
Query:   31 SYLSAISEVIVDPAMECEGMANNDMGEARMDIIDSEINHLGHYESESYGIAYKVRGFCTDLSNPELFETVGVTGDILGSHIHHLYFGHYSYGHQGGNWSYNTVHDNVGYGFDPHDDSDYVTISNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHVTDAGKMTGNGIMLHRSCDYATVRGNVVENSMDSGVAVYESSNCEISQNNLSRNKNGIRMSMGSSDNLAFENHIVINGEDEKYAIYLYRGNDTPAVEGSDGRPRNNRIFDNSLMSDNAVVMVRNSDDNIIEGNTIFGRESRFVDSFNT---LWYGN-SVPDVHEFKLEDDSCF 1005
            SY+SA+SE+++DP   CEG A N MGEARMDI++SE+ ++G ++SESYG+ +KVRGFC D SNPE+F+ V V G+I  S +HH+ F  Y+YGHQ G+W  NTVH N GYG+DPHDDSD++TI +N                             G++   G  T  GI LHRS DYA V+ N    + D+G+A+ ESSN EIS N    NK GIRMS+G  DN    N +    +   YAIY Y+G+D   V+ + GR ++N    N+++     + ++ SD   I  N  +  E   V+  NT   +  GN  + D  E +L + +CF
Sbjct:  265 SYISAVSEIVLDPTQTCEGNAKNTMGEARMDIVNSEMGYMGFHDSESYGLTWKVRGFCKDKSNPEVFDQVNVYGNIYDSELHHMNFAVYTYGHQQGDWRRNTVHSNSGYGYDPHDDSDFLTIHDNVVYDNNWHGIIASKRCNNVSIQ-------GNIVYGGNDTSAGIFLHRSSDYAVVKDNHCYGNGDAGMAMLESSNAEISGNIFEGNKYGIRMSVGCRDNFVSNNTMTNTSQ---YAIYTYQGSDPAEVQPT-GRSQDNIFDSNTVVGGPQAIKLKESDGTRITNNVFY--EPGLVEFSNTTENVVTGNVGLEDATEVELVEPACF 580          
BLAST of mRNA_Ecto-sp13_S_contig8677.20127.1 vs. uniprot
Match: Q7XAK2_9PHAE (Mannuronan C-5-epimerase n=2 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAK2_9PHAE)

HSP 1 Score: 224 bits (570), Expect = 5.910e-65
Identity = 160/334 (47.90%), Postives = 212/334 (63.47%), Query Frame = 1
Query:   31 SYLSAISEVIVDPAMECEGMANNDMGEARMDIIDSEINHLGHYESESYGIAYKVRGFCTDLSNPELFETVGVTGDILGSHIHHLYFGHYSYGHQGGNWSYNTVHDNVGYGFDPHDDSDYVTISNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHVTDAGKMTGNGIMLHRSCDYATVRGNVVENSMDSGVAVYESSNCEISQNNLSRNKNGIRMSMGSSDNLAFENHIVINGEDEKYAIYLYRGNDTPAVEGSDGRPRNNRIFDNSLMSDNAVVMVRNSDDNIIEGNTIF-GRESRFVDSFNTLWYGNSVPDVHEFKLEDDSCFDPESDMDY 1029
            SY+SA+SE+I D   +C+G A   MGEARMDI DSE+ +LG+  SESYG+ +KVRGFC D SNPE+F+ V V G+I  S IHH +FG Y+YGH+ G+W  N +H N  YGFDPHDDSD++TI +N  XXXXXXXXXXXXXXXXXXXXXXXXXX       G     GI LHRS D A V+ N    + D+G+A+ ES N ++S N    NK G+R+S+G +DN+  +N I    +  KY +Y Y G+D P V  S GR ++N   DN++   +  + +  +D      NT    + +RF D+  TL  GN+       K+   +CFD +SD DY
Sbjct:  176 SYISAVSEIITDSKEKCDGKAKKTMGEARMDIEDSEMAYLGYQGSESYGLTWKVRGFCKDGSNPEVFDEVNVYGNIYDSDIHHNHFGVYTYGHEQGDWRRNKMHHNREYGFDPHDDSDFLTIHDNKVXXXXXXXXXXXXXXXXXXXXXXXXXX-------GSSKSVGIFLHRSSDDAIVKDNXXXXNGDAGMALMESFNADVSNNKFEDNKYGVRLSVGCADNVFSKNVI---SDSSKYNVYTYEGSDDPWVVDS-GRSQDNIFSDNTITGGDESIKLTMADGTEFIDNTFKRAKTARFEDAETTLMSGNTGLGSATLKVSKGACFDKKSDSDY 498          
BLAST of mRNA_Ecto-sp13_S_contig8677.20127.1 vs. uniprot
Match: A8CEP1_SACJA (Mannuronan C-5 epimerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A8CEP1_SACJA)

HSP 1 Score: 223 bits (568), Expect = 1.090e-64
Identity = 147/334 (44.01%), Postives = 193/334 (57.78%), Query Frame = 1
Query:   31 SYLSAISEVIVDPAMECEGMANNDMGEARMDIIDSEINHLGHYESESYGIAYKVRGFCTDLSNPELFETVGVTGDILGSHIHHLYFGHYSYGHQGGNWSYNTVHDNVGYGFDPHDDSDYVTISNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHVTDAGKMTGNGIMLHRSCDYATVRGNVVENSMDSGVAVYESSNCEISQNNLSRNKNGIRMSMGSSDNLAFENHIVINGEDEKYAIYLYRGNDTPAVEGSDGRPRNNRIFDNSLMSDNAVVMVRNSDDNIIEGNTIFGRES-RFVDSFNTLWYGNSVPDVHEFKLEDDSCFDPESDMDY 1029
            SY+SA+SEVI D   +C+G A  +MGEARMDI DSE+ +LG++ SESYG+ +KVRG C DLSN E+F+ V V G+I  S IHH YFG Y+YGH+ G+W  N +H N  YGFDPHDDSD++TI +N                  XXXXXXXXXX       G     GI LHRS D A V+ N V ++ D+G+A+ E+ N ++S N    NK GIRMS+G +DN+  +N I  +    KY +Y Y+G+D P V  S GR ++              V +  +D      NT    ++ RF D   TL  GNS       K+ D SCFD +SD  Y
Sbjct:  173 SYISAVSEVITDSKQKCDGRAKKNMGEARMDIEDSEMAYLGYFGSESYGLTWKVRGLCRDLSNLEVFDAVNVYGNIYDSDIHHNYFGVYTYGHEQGDWRRNKMHHNTEYGFDPHDDSDFLTIHDNEVYNNGNHGIIASKRCNGXXXXXXXXXX-------GAAKSVGIFLHRSSDDAIVKDNYVHDNGDAGMALMETFNADVSNNKFEDNKYGIRMSVGCADNVFSKNDITGSS---KYNVYTYQGSDAPWVVDS-GRSQDXXXXXXXXSGGQETVKLTMADGTEFIDNTFKSAKTIRFEDCQGTLMSGNSGLGGASLKVTDGSCFDKKSDSAY 495          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8677.20127.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZF9_ECTSI1.010e-20793.50Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
D7FZF8_ECTSI1.890e-13470.57Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5KBD3_9PHAE2.160e-12564.87MEP17 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D7FXE4_ECTSI7.010e-7844.41Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7G339_ECTSI2.990e-7543.53Mannuronan C-5-epimerase n=2 Tax=Ectocarpus silicu... [more]
D8LRM4_ECTSI1.690e-7043.95Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectoca... [more]
D8LC73_ECTSI2.010e-6943.28Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus sili... [more]
D8LD45_ECTSI1.740e-6841.64Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
Q7XAK2_9PHAE5.910e-6547.90Mannuronan C-5-epimerase n=2 Tax=Laminaria digitat... [more]
A8CEP1_SACJA1.090e-6444.01Mannuronan C-5 epimerase n=1 Tax=Saccharina japoni... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8677contigEcto-sp13_S_contig8677:62..3200 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score243.4
Seed ortholog evalue1.7e-61
Seed eggNOG ortholog2880.D8LC73
Model size1140
KEGG koko:K11244
KEGG Pathwayko04011,ko04139,map04011,map04139
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.protein xylosyltransferase activity
EggNOG OGsKOG4157@1,KOG4157@2759
Cds size1140
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8677.20127.1prot_Ecto-sp13_S_contig8677.20127.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig8677 62..3200 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464139.8619287-CDS-Ecto-sp13_S_contig8677:61..2061681464139.8619287-CDS-Ecto-sp13_S_contig8677:61..206Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8677 62..206 +
1681464139.8756094-CDS-Ecto-sp13_S_contig8677:629..8201681464139.8756094-CDS-Ecto-sp13_S_contig8677:629..820Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8677 630..820 +
1681464139.8853784-CDS-Ecto-sp13_S_contig8677:1138..12381681464139.8853784-CDS-Ecto-sp13_S_contig8677:1138..1238Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8677 1139..1238 +
1681464139.8947816-CDS-Ecto-sp13_S_contig8677:1655..18831681464139.8947816-CDS-Ecto-sp13_S_contig8677:1655..1883Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8677 1656..1883 +
1681464139.9038513-CDS-Ecto-sp13_S_contig8677:2207..24341681464139.9038513-CDS-Ecto-sp13_S_contig8677:2207..2434Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8677 2208..2434 +
1681464139.9127474-CDS-Ecto-sp13_S_contig8677:2951..32001681464139.9127474-CDS-Ecto-sp13_S_contig8677:2951..3200Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8677 2952..3200 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig8677.20127.1

>prot_Ecto-sp13_S_contig8677.20127.1 ID=prot_Ecto-sp13_S_contig8677.20127.1|Name=mRNA_Ecto-sp13_S_contig8677.20127.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=380bp
MRTTATAPPHSYLSAISEVIVDPAMECEGMANNDMGEARMDIIDSEINHL
GHYESESYGIAYKVRGFCTDLSNPELFETVGVTGDILGSHIHHLYFGHYS
YGHQGGNWSYNTVHDNVGYGFDPHDDSDYVTISNNEVYNNGWHGIIASKR
CDHVTIENNHVYDNGHVTDAGKMTGNGIMLHRSCDYATVRGNVVENSMDS
GVAVYESSNCEISQNNLSRNKNGIRMSMGSSDNLAFENHIVINGEDEKYA
IYLYRGNDTPAVEGSDGRPRNNRIFDNSLMSDNAVVMVRNSDDNIIEGNT
IFGRESRFVDSFNTLWYGNSVPDVHEFKLEDDSCFDPESDMDYVAGEAGG
GEGDGSWSSTLSYSYDFGYEYEEGFFCGV*
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mRNA from alignment at Ecto-sp13_S_contig8677:62..3200+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig8677.20127.1 ID=mRNA_Ecto-sp13_S_contig8677.20127.1|Name=mRNA_Ecto-sp13_S_contig8677.20127.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3139bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8677:62..3200+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCGTACCACCGCCACCGCACCGCCACACAGTTACCTTAGCGCGATCAG CGAGGTCATCGTTGATCCGGCGATGGAGTGCGAGGGGATGGCGAACAACG ACATGGGGGAGGCTAGGATGGACATCATTGACTCGGAGATCAACCGTGAG TGTGCCACACAAAAAACCACAGTCGGTAGCGCTCGCTGCTTGATTGTATG CACAGAGGGTACCCGTATGTTTGTATTTACATGCGACGAGTATCGTTCTC GGAACACGATACAAAAAAAAATAGTGCTGGCATGTATCAGACCTTCCTGC CCTTGTCTTCTTTGTTCCGGGCACTCCACTCGAGCTACGTACATGCCACG AGCATTATCCTCGCGCTTCACACAAATCTGCAGACCTTTGTGTTCATCGC CTTTTTGTTCTGCTCAATTCACCATCTGTCTCCAGTCCTCATCGAGTGAA CATCGTTCTATGCAAACCTTGTCATCATCGGCTGATTGTTGTTATGTTCG ATTCACCACCTCCTCTGTTCCCCGCCCACCCCCAACTCGTCTTCTCTCCA CCAAAACTAATCTGCCAGACCTCGGACACTACGAGTCGGAGAGCTACGGC ATCGCCTACAAAGTCCGCGGTTTCTGCACGGACCTCTCCAACCCGGAGCT GTTCGAAACGGTGGGCGTGACGGGAGACATCCTTGGCTCGCACATCCACC ACCTCTACTTCGGCCACTACTCCTACGGGCACCAGGGGGGCAACTGGAGC TACAACACGGTGGGGGCTTTAATTTGTGGATATTATATGTCCGGATGTCC GCACCCTGAACAAATTCTCTCATGATGTAGTACAATGTGTCTAGGACGAC GTCTCACCTCACTTGTTGAAATGGCCACCAGAGTAGACGTTATCCACGGA CCAGGATTCACACACATAGCCATCCAGCAAGCCATGTGTCTCCAATTGCG GGGCAGGTATTGTCGTAGTTGTGTATACCCGTGTTGCAGCTACTACTAAT ATTTACTCTTCCGTTTCTCCCAGAACCGTGCCGAAATTCTTACTCCGTTT TTGTTTTTCTTCACTTTTTTCGGTTAGGTGCACGACAACGTCGGCTACGG ATTTGACCCTCACGACGACTCTGACTACGTCACCATCAGCAACAACGAAG TCTACAACAACGGCTGGCATGGAATCAGTGAGTCTCGCAACAACGCTGTT TGAGTTCCAAGTGCTTGACGGAGCACCGCCTCGGATTGGATGTCTTGATG TTGACGACATGAAATACACCACCGCGATTGTTCTGCACCTGAAGACCCCT GCTCTGTATTAGACTTTAGCCTATCCCCGCACGTTCTAAACTATATCCCT TCCGCCTTGGTACACCCCCCACCCACCCCGAAGCTCTCTCTCGGATGAAG CATTTACCACCAAAGAAAGTTATCGCGATTCTCGCGATTCTGCTGTGTTT GAAGACCTCTGTTCCCGTATAAAATTATGACTTTTGTAACCGTTCCGCTC TAACAATATACATGAATATCCCTTCCGTCTGCTTGCCTTCCTTCCCCACC CCGAACCCCCTTTCTCGCGTGATTCTCTCGCACGTTTCTTCCAGTCGCGT CGAAGAGGTGCGACCACGTCACCATCGAGAACAACCACGTCTACGACAAC GGCCACGTCACCGATGCCGGAAAGATGACCGGAAACGGCATCATGCTCCA CCGCAGCTGCGACTACGCCACCGTGAGGGGCAACGTGGTGGAGAACAGCA TGGACTCGGGCGTGGCCGTGTACGAGAGCTCCAACTGCGAGATCTCTCAG AACAACCTCTCCAGGAACAAGAGTAAGAGTCTGGTCATGTGGTTGTGGTT TGTATGGTGTGTACGAGAGTGAGTCGTGGTTGTGGTTTGTGGGTGGGGGG TGGCTTGCACATGACTTGTGTTTCGAACATTTAGAAATGAAGTTTCCTGC GGTGTTCGTACACAGCCTTTTCTTCTTAGAACTACTGGGAAATTATAATG GATTACCATCGTGTGTGTTTGCATGATCGTGTGGTCCGATCTGCTTACTT GAATGAATCTCTCATATCTCTCCCTTCCCTCCTTCCCCCCGTGCTTGCCG CCTTTCTGGCTCCTCCGTCTTTTTGCTGCCTGCGACCGCGCAAAAGACGG CATCCGCATGTCCATGGGCTCCTCCGACAACCTCGCCTTCGAGAACCACA TCGTCATCAACGGCGAGGACGAGAAGTACGCCATCTACCTCTACCGGGGC AACGACACGCCAGCCGTGGAAGGGTCCGACGGCAGGCCGAGGAACAACCG CATCTTCGACAACAGTCTCATGAGCGACAACGCCGTCGTAATGGTCCGGA ACTCCGACGATAACATCATCGAGGTGATTGCTTGATCGCCGCTGCTAGCT GCTGCTGCTTGTAGATCTTTTCGTGCTACATGTTCATGAGCTACCATCAT TTTCGTGCTACGTCGTTGTACAACATCATCGCGACGATCGATATTTCTAC AGTACATGTTCACGATTGATTGGAGTGATGAGATTCTTATTTTGCGGGTG GTGTGGACGCTTGTGTCTTGGGCACGAGTTCGTTTCAGTTTTCTGTATTT CGCGTGTGTACCACCTTGCCAACCTGCACACCTTCCGAGTAGCTACCATC TACATCGCGACGATCGATATTTCTACAGTACATGTTCACGATTGATTGGA GTGATGAGATTCTTATTTTGCGGGTGGTGTGGACGCTTGTGTCTTGGGCA CGAGTTCGTTTCAGTTTTCTGTATTTCGCGTGTGTACCACCTTGCCAACC TGCACACCTTCCGAGTAGCTACCATCTAGCCATCCCTCCCACAACCCCGT CTCGTCACACCTCCCCTCCATCAAACTCGCCTGGCCGCAGGGGAACACCA TCTTCGGCAGAGAGTCCCGGTTCGTGGACTCCTTCAACACGCTGTGGTAC GGCAATAGCGTCCCCGACGTGCACGAGTTCAAGCTGGAGGACGACTCGTG CTTCGACCCGGAAAGTGATATGGACTACGTGGCCGGCGAGGCGGGAGGGG GAGAAGGGGACGGGTCGTGGTCGTCGACGCTGTCGTACTCTTACGACTTC GGCTACGAGTACGAGGAGGGTTTCTTCTGCGGCGTATAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8677:62..3200+

>mRNA_Ecto-sp13_S_contig8677.20127.1 ID=mRNA_Ecto-sp13_S_contig8677.20127.1|Name=mRNA_Ecto-sp13_S_contig8677.20127.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1140bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8677:62..3200+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCGTACCACCGCCACCGCACCGCCACACAGTTACCTTAGCGCGATCAG
CGAGGTCATCGTTGATCCGGCGATGGAGTGCGAGGGGATGGCGAACAACG
ACATGGGGGAGGCTAGGATGGACATCATTGACTCGGAGATCAACCACCTC
GGACACTACGAGTCGGAGAGCTACGGCATCGCCTACAAAGTCCGCGGTTT
CTGCACGGACCTCTCCAACCCGGAGCTGTTCGAAACGGTGGGCGTGACGG
GAGACATCCTTGGCTCGCACATCCACCACCTCTACTTCGGCCACTACTCC
TACGGGCACCAGGGGGGCAACTGGAGCTACAACACGGTGCACGACAACGT
CGGCTACGGATTTGACCCTCACGACGACTCTGACTACGTCACCATCAGCA
ACAACGAAGTCTACAACAACGGCTGGCATGGAATCATCGCGTCGAAGAGG
TGCGACCACGTCACCATCGAGAACAACCACGTCTACGACAACGGCCACGT
CACCGATGCCGGAAAGATGACCGGAAACGGCATCATGCTCCACCGCAGCT
GCGACTACGCCACCGTGAGGGGCAACGTGGTGGAGAACAGCATGGACTCG
GGCGTGGCCGTGTACGAGAGCTCCAACTGCGAGATCTCTCAGAACAACCT
CTCCAGGAACAAGAACGGCATCCGCATGTCCATGGGCTCCTCCGACAACC
TCGCCTTCGAGAACCACATCGTCATCAACGGCGAGGACGAGAAGTACGCC
ATCTACCTCTACCGGGGCAACGACACGCCAGCCGTGGAAGGGTCCGACGG
CAGGCCGAGGAACAACCGCATCTTCGACAACAGTCTCATGAGCGACAACG
CCGTCGTAATGGTCCGGAACTCCGACGATAACATCATCGAGGGGAACACC
ATCTTCGGCAGAGAGTCCCGGTTCGTGGACTCCTTCAACACGCTGTGGTA
CGGCAATAGCGTCCCCGACGTGCACGAGTTCAAGCTGGAGGACGACTCGT
GCTTCGACCCGGAAAGTGATATGGACTACGTGGCCGGCGAGGCGGGAGGG
GGAGAAGGGGACGGGTCGTGGTCGTCGACGCTGTCGTACTCTTACGACTT
CGGCTACGAGTACGAGGAGGGTTTCTTCTGCGGCGTATAG
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