prot_Ecto-sp13_S_contig8662.20106.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8662.20106.1
Unique Nameprot_Ecto-sp13_S_contig8662.20106.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length105
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8662.20106.1 vs. uniprot
Match: A0A6H5JIK3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JIK3_9PHAE)

HSP 1 Score: 168 bits (425), Expect = 3.030e-52
Identity = 94/104 (90.38%), Postives = 96/104 (92.31%), Query Frame = 0 
Query:    1 MNVEPAAADTLRSERPDEVQIGAVVLPLVLSAALVTVVVAYRCFANRLRRDRLALERREEVEEIRAARGREEAGGGGSPHRSAAMAGLGNDQYMSAYKNLLAQA 104
            MN E AAADTLRSE PDEVQIG +VLPLVLSAALVTVVVAYRCFANRLRRDRLALER+ EVEEIRAARGREEAG GGSPHRSAAMAGLG DQYMSAYK LLAQA
Sbjct:    1 MNAELAAADTLRSEGPDEVQIGVIVLPLVLSAALVTVVVAYRCFANRLRRDRLALERQAEVEEIRAARGREEAGEGGSPHRSAAMAGLGEDQYMSAYKKLLAQA 104
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8662.20106.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JIK3_9PHAE3.030e-5290.38Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 45..104
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..44
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availableTMHMMTMhelixcoord: 20..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8662contigEcto-sp13_S_contig8662:814..2495 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8662.20106.1mRNA_Ecto-sp13_S_contig8662.20106.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8662 224..2495 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8662.20106.1 ID=prot_Ecto-sp13_S_contig8662.20106.1|Name=mRNA_Ecto-sp13_S_contig8662.20106.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=105bp
MNVEPAAADTLRSERPDEVQIGAVVLPLVLSAALVTVVVAYRCFANRLRR
DRLALERREEVEEIRAARGREEAGGGGSPHRSAAMAGLGNDQYMSAYKNL
LAQA*
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