mRNA_Ecto-sp13_S_contig12423.2011.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig12423.2011.1 vs. uniprot
Match: D8LHC5_ECTSI (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHC5_ECTSI) HSP 1 Score: 424 bits (1089), Expect = 2.960e-147 Identity = 213/215 (99.07%), Postives = 215/215 (100.00%), Query Frame = 1
Query: 13 MEPLNEANGYSSKNAFKGRLVFGVYGKDSPKAAENFLRYVRADRSNGEPSYASGQLTKMEPGVFLEGGKIAGLNIINIGGQEELEYGGEVVAPLPSLLEASSGDRPHDRRGLLTRDRLSRGPEFGVTLGAAPALDGSHEVFGRLLQGEDVLARLEKVPVYGGQSRLEEGSLASDAFKAQNRALVYIGKNVFRDERAVDRTGSLMRRVDILSCGML 657
MEPLNEANGYSSKNAFKGRLVFGVYGK+SPKAAENFLRYVRADRSNGEPSYASGQLTKMEPGVFLEGGKIAGLNIINIGGQEELEYGGEVVAPLPSLLEASSGDRPHDRRGLLTRDRLSRGPEFGVTLGAAP+LDGSHEVFGRLLQGEDVLARLEKVPVYGGQSRLEEGSLASDAFKAQNRALVYIGKNVFRDERAVDRTGSLMRRVDILSCGML
Sbjct: 1 MEPLNEANGYSSKNAFKGRLVFGVYGKESPKAAENFLRYVRADRSNGEPSYASGQLTKMEPGVFLEGGKIAGLNIINIGGQEELEYGGEVVAPLPSLLEASSGDRPHDRRGLLTRDRLSRGPEFGVTLGAAPSLDGSHEVFGRLLQGEDVLARLEKVPVYGGQSRLEEGSLASDAFKAQNRALVYIGKNVFRDERAVDRTGSLMRRVDILSCGML 215
BLAST of mRNA_Ecto-sp13_S_contig12423.2011.1 vs. uniprot
Match: A0A6H5JYA6_9PHAE (PPIase cyclophilin-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYA6_9PHAE) HSP 1 Score: 427 bits (1097), Expect = 1.030e-146 Identity = 214/219 (97.72%), Postives = 218/219 (99.54%), Query Frame = 1
Query: 1 QVRIMEPLNEANGYSSKNAFKGRLVFGVYGKDSPKAAENFLRYVRADRSNGEPSYASGQLTKMEPGVFLEGGKIAGLNIINIGGQEELEYGGEVVAPLPSLLEASSGDRPHDRRGLLTRDRLSRGPEFGVTLGAAPALDGSHEVFGRLLQGEDVLARLEKVPVYGGQSRLEEGSLASDAFKAQNRALVYIGKNVFRDERAVDRTGSLMRRVDILSCGML 657
+VRIMEPLNEANGYSSKNAFKGRLVFGVYGK+SPKAAENFLRYVRADRSNGEPSYASGQLTKMEPGVFLEGGKIAGLNIINIGGQEELEYGGEVVAPLPSLLEASS +RPHDRRGLLTRDRLSRGPEFG+TLGAAPALDGSHEVFGRLLQGEDVLARLEKVPVYGGQSRLEEGSLASDAFKAQNRALVYIGKNVFRDERAVDRTGSLMRRVDILSCGML
Sbjct: 110 EVRIMEPLNEANGYSSKNAFKGRLVFGVYGKESPKAAENFLRYVRADRSNGEPSYASGQLTKMEPGVFLEGGKIAGLNIINIGGQEELEYGGEVVAPLPSLLEASSNNRPHDRRGLLTRDRLSRGPEFGITLGAAPALDGSHEVFGRLLQGEDVLARLEKVPVYGGQSRLEEGSLASDAFKAQNRALVYIGKNVFRDERAVDRTGSLMRRVDILSCGML 328
BLAST of mRNA_Ecto-sp13_S_contig12423.2011.1 vs. uniprot
Match: A0A836CET4_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CET4_9STRA) HSP 1 Score: 213 bits (542), Expect = 2.040e-64 Identity = 105/215 (48.84%), Postives = 147/215 (68.37%), Query Frame = 1
Query: 13 MEPLNEANGYSSKNAFKGRLVFGVYGKDSPKAAENFLRYVRADRSNGEPSYASGQLTKMEPGVFLEGGKIAGLNIINIGGQEELEYGGEVVAPLPSLLEASSGDRPHDRRGLLTRDRLSRGPEFGVTLGAAPALDGSHEVFGRLLQGEDVLARLEKVPVYGGQSRLEEGSLASDAFKAQNRALVYIGKNVFRDERAVDRTGSLMRRVDILSCGML 657
MEPL EANGYSS +A G+LV ++G ++PK E FL Y+ + ++ PSYAS T++ PG L+GG+I+GLN I++ G +L+Y G + PS S HD RGLLT+ +L GPEF +TLG P LD S+ VFGR+++GE+ L LE+VP+Y S EEGS+A + ++AQ A +++G+NV RDERAVDRTG+ +RRVD++ CG L
Sbjct: 1 MEPLTEANGYSSASAPTGKLVLELFGTEAPKTVEAFLSYITPEPADSGPSYASSLFTRLVPGRQLDGGRISGLNQISLAGSSQLQYFGRIFPATPSF---ESNALRHDCRGLLTKSKLEAGPEFTITLGPCPELDASNVVFGRVVEGEETLRALEQVPLYSSGSTQEEGSVADNWYRAQRSASLFVGRNVLRDERAVDRTGTFLRRVDVVRCGRL 212
BLAST of mRNA_Ecto-sp13_S_contig12423.2011.1 vs. uniprot
Match: A0A7S4DA21_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DA21_HETAK) HSP 1 Score: 175 bits (444), Expect = 2.110e-48 Identity = 105/221 (47.51%), Postives = 132/221 (59.73%), Query Frame = 1
Query: 4 VRIMEPLNEANGYSSKNAFKGRLVFGVYGKDSPKAAENFLRYVRA--DRSNGEPSYASGQLTKMEPGVFLEGGKIAGLNIINIGGQEELEYGGEVVAPLPSLLEASSGDRPHDRRGLLTRDRLSRGPEFGVTLGAAPALD-GSHEVFGRLLQGEDVLARLEKVPVYGGQSRLEEGSLASDAFKAQNRALVYIGKNVFRDERAVDRTGSLMRRVDILSCGML 657
++I LNE+N ++S N +KGRLVFG++G+ +P++ LRY A D P+YA G LEGG+I GL +NI G + EY G+V+ PS E S H+RRGLLTRD S GPEFGVTL AP LD G VFG LL+GEDVL LE VP Y S GSLA D ++AQ + G+ DERAV + L+RRVDI +CGML
Sbjct: 106 IQIASILNESNNFTSYNDYKGRLVFGLWGEAAPRSVRTALRYFDAGPDPEAPGPTYARGAAMTSRGPTLLEGGRIKGLQQVNIAGSLQYEYRGKVIVG-PSAFELSP--TKHNRRGLLTRDSFSTGPEFGVTLADAPELDDGRRVVFGELLEGEDVLQALELVPTYQAGSTQPRGSLADDWYRAQRDFFLRAGQAA-GDERAVGQVNKLLRRVDIKACGML 322
BLAST of mRNA_Ecto-sp13_S_contig12423.2011.1 vs. uniprot
Match: R1E2A0_EMIHU (PPIase cyclophilin-type domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1E2A0_EMIHU) HSP 1 Score: 169 bits (429), Expect = 1.640e-46 Identity = 95/224 (42.41%), Postives = 136/224 (60.71%), Query Frame = 1
Query: 4 VRIMEPLNEANGYSSKNAFKGRLVFGVYGKDSPKAAENFLRYVRAD----RSNGE-PSYASGQLTKMEPGVFLEGGKIAGLNIINIGGQEELEYGGEVVAPLPSLLEASSGDRPHDRRGLLTRDRLSRGPEFGVTLGAAPALDGSHEVFGRLLQGE-DVLARLEKVPVYGGQSRLEEGSLASDAFKAQNRALVYIGKNVFRDERAVDRTGSLMRRVDILSCGML 657
+R++ + +G A +GR+ F +YG D+PKA E F +V+ D RS+ + PSY +G T + PGV L+GG+I GL + G ++ EYG +V PL ++E + + HDRRGL+TR + S GPEFG+TLG AP LD EV GRL Q +L +E +P G+S E GS+A + F AQ + K + D RA DRTG L+RRV+I++CG+L
Sbjct: 75 LRVIRSFDVDSGVLEDAAVRGRVQFELYGNDAPKAVERFKGFVKGDIGQFRSSSDGPSYRTGAFTTLRPGVILQGGRINGLRLTEFAGAQQYEYGSRLV-PLDGVVEVN--ELKHDRRGLITRRQFSAGPEFGITLGPAPQLDSGWEVIGRLSQDSAGLLPLIEGLPYITGRSLEEPGSVADNVFNAQKSLFTSLSKTI-GDSRAEDRTGQLLRRVEIVNCGLL 294
BLAST of mRNA_Ecto-sp13_S_contig12423.2011.1 vs. uniprot
Match: A0A7S0LLF5_9EUKA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LLF5_9EUKA) HSP 1 Score: 161 bits (408), Expect = 2.000e-43 Identity = 90/206 (43.69%), Postives = 126/206 (61.17%), Query Frame = 1
Query: 55 AFKGRLVFGVYGKDSPKAAENFLRYVRAD-----RSNGEPSYASGQLTKMEPGVFLEGGKIAGLNIINIGGQEELEYGGEVVAPLPSLLEASSGDRPHDRRGLLTRDRLSRGPEFGVTLGAAPALDGSHEVFGRLLQGEDVLARLEKVPVYGGQSRLEEGSLASDAFKAQNRALVYIGKNVFRDERAVDRTGSLMRRVDILSCGML 657
A +GR+VF +YG +P+ + F +++ S PSY S ++ PGV +EGG+I GL++ GQ E +Y ++ P ++E + D H RRGLLTR L+ GPEFGVTL AAP+LDGS EV G L +G+++LA +E +P G+S E GSLA F+AQ + K V D RA DRTG L+RRV+I +CG+L
Sbjct: 92 AVRGRMVFDLYGDAAPRGTDRFADFIKGSVGQFKGSVDGPSYRSSSFERLRPGVLVEGGRITGLDLTPFAGQLEYQYRSRLLQLRP-VMEVN--DIRHTRRGLLTRRILNSGPEFGVTLAAAPSLDGSWEVIGELQEGDELLALIEGLPFISGKSLEEPGSLADQVFQAQKSLFTSLSKGV-GDPRAADRTGQLLRRVEITNCGLL 293
BLAST of mRNA_Ecto-sp13_S_contig12423.2011.1 vs. uniprot
Match: A0A0M0K0Y1_9EUKA (Peptidyl-prolyl isomerase g n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K0Y1_9EUKA) HSP 1 Score: 160 bits (405), Expect = 2.690e-43 Identity = 98/209 (46.89%), Postives = 123/209 (58.85%), Query Frame = 1
Query: 55 AFKGRLVFGVYGKDSPKAAENFLRYV-----RADRSNGEPSYASGQLTKMEPGVFLEGGKIAGLNIINIGGQEELEYGGEVVAPLPSLLEASSGDRPHDRRGLLTRDRLSRGPEFGVTLGAAPALDGSHEVFGRL---LQGEDVLARLEKVPVYGGQSRLEEGSLASDAFKAQNRALVYIGKNVFRDERAVDRTGSLMRRVDILSCGML 657
A + RL FG++G +PK FL +V + S G P+Y+ Q K++PGV LEGGKIAGL GQ E EY G ++ PL +LEAS D HDRRGLLTR + GPEFG+TL AP LDG+HEV G+L E +L LE +P G+S EG+ A+ F AQ + K V D RA DRTG L+RRV+I CG L
Sbjct: 62 ATRARLTFGLFGDSAPKGVAKFLDFVDGTPGQFKASGGGPAYSGAQFEKLQPGVLLEGGKIAGLRQTKFAGQLEYEYLGRLL-PLRPVLEAS--DVLHDRRGLLTRSIFAIGPEFGITLAPAPNLDGTHEVIGQLEPNAANEALLTILEGLPYITGKSMEGEGTAANAVFTAQREFFTGLSKAV-GDSRAEDRTGQLLRRVEITKCGRL 266
BLAST of mRNA_Ecto-sp13_S_contig12423.2011.1 vs. uniprot
Match: A0A7S0JDD1_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JDD1_9EUKA) HSP 1 Score: 154 bits (390), Expect = 8.290e-42 Identity = 88/202 (43.56%), Postives = 124/202 (61.39%), Query Frame = 1
Query: 67 RLVFGVYGKDSPKAAENFLRYVRADRSNGE-----PSYASGQLTKMEPGVFLEGGKIAGLNIINIGGQEELEYGGEVVAPLPSLLEASSGDRPHDRRGLLTRDRLSRGPEFGVTLGAAPALDGSHEVFGRLLQGEDVLARLEKVPVYGGQSRLEEGSLASDAFKAQNRALVYIGKNVFRDERAVDRTGSLMRRVDILSCGML 657
R+VFG+Y + +P E F+ +V+ + PSY S ++ PGV EGG+I GL++ GQ E +Y ++ PL +LE + D H +RGLLTR L+ GPEFGVTL AAP+LDGS EV G L QG ++L +E++P G+S + GSLA F+AQ + K+V D RA DRTG L+RRV+I +CG++
Sbjct: 9 RMVFGLYNEAAPLGTERFVNFVQGSVGQFKGTLDGPSYRSSCFERLRPGVVAEGGRITGLDLTPFAGQLEYQYRSRLL-PLRPVLEVN--DLKHSQRGLLTRRILNAGPEFGVTLAAAPSLDGSWEVIGELQQGGELLHLIEELPFITGKSVEQPGSLAEQVFQAQKSVFSSLSKSV-GDSRASDRTGQLLRRVEITNCGVI 206
BLAST of mRNA_Ecto-sp13_S_contig12423.2011.1 vs. uniprot
Match: A0A7S0HZC1_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HZC1_9CRYP) HSP 1 Score: 145 bits (366), Expect = 1.390e-36 Identity = 81/200 (40.50%), Postives = 123/200 (61.50%), Query Frame = 1
Query: 61 KGRLVFGVYGKDSPKAAENFLRYVRADRSNGEPSYASGQLTKMEPGVFLEGGKIAGLNIINIGGQEELEYGGEVVAPLPSLLEASSGDRPHDRRGLLTRDRLSRGPEFGVTLGAAPALDGSHEVFGRLLQGEDVLARLEKVPVYGGQSRLEEGSLASDAFKAQNRALVYIGKNVFRDERAVDR-TGSLMRRVDILSCGML 657
+GR+VFG+YGK SP+ ++FL++V A+ G P+Y+SG + E G ++EGG+I GL+ + GQE ++ G VV PL +LE +S HDR+ LL+ + + GPEF +TL + P LD S+ VFG ++ GE+ + + K+P G+S EGS A +KAQ + K V D R + G L+RRV+I CG++
Sbjct: 168 RGRIVFGLYGKQSPQTVQHFLKFVTANYGEG-PAYSSGMFYRHEAGRWIEGGRINGLSTTQVAGQETFQWNGRVV-PLAPILETNS--LRHDRKFLLSHRKFNPGPEFDITLSSTPELDASNTVFGEVIAGEEYVQEIVKLPFVTGKSLDPEGSPADSWWKAQREFFRNVAK-VSGDTRVTNTFPGKLLRRVEITKCGLI 362
BLAST of mRNA_Ecto-sp13_S_contig12423.2011.1 vs. uniprot
Match: W7U5A0_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U5A0_9STRA) HSP 1 Score: 144 bits (364), Expect = 2.710e-36 Identity = 87/208 (41.83%), Postives = 119/208 (57.21%), Query Frame = 1
Query: 58 FKGRLVFGVYGKDSPKAAENFLRYVRADRSNGEPSYASGQLTKMEPGVFLEGGKIAGLNIINIGGQEELEYGGEVVAPLPSLLEASSGDRP-----HDRRGLLTRDRLSRG--PEFGVTLGAAPALD-GSHEVFGRLLQGEDVLARLEKVPVYGGQSRLEEGSLASDAFKAQNRALVYIGKNVFRDERAVDRTGSLMRRVDILSCGML 657
F GR+VFG++GK +P F++Y +A PSYA LTK PGV +E G+I GL I I G E EYG + LL A D P HDRRGLLT+ P F +TLG PALD G VFG LL+G++ L +EKVP+Y +S E+ + F Q + + + K++ DERAV+R GS ++RV++L+ G+L
Sbjct: 163 FVGRMVFGLFGKAAPIVVGEFIKYTKAPYGGNFPSYAFSSLTKRTPGVSVEAGRIKGLKEIEIAGTREYEYGDQ-------LLGAKGMDEPTLALKHDRRGLLTKSSTQDAVDPVFEMTLGPQPALDNGDSIVFGILLEGQEALDAMEKVPIYTYESAGEQPEALNSLFTNQKKLFLSMAKSL-NDERAVNRQGSFLKRVEVLNVGLL 362 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12423.2011.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig12423.2011.1 >prot_Ecto-sp13_S_contig12423.2011.1 ID=prot_Ecto-sp13_S_contig12423.2011.1|Name=mRNA_Ecto-sp13_S_contig12423.2011.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=216bp MEPLNEANGYSSKNAFKGRLVFGVYGKDSPKAAENFLRYVRADRSNGEPSback to top mRNA from alignment at Ecto-sp13_S_contig12423:201..4844- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig12423.2011.1 ID=mRNA_Ecto-sp13_S_contig12423.2011.1|Name=mRNA_Ecto-sp13_S_contig12423.2011.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4644bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12423:201..4844- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig12423:201..4844- >mRNA_Ecto-sp13_S_contig12423.2011.1 ID=mRNA_Ecto-sp13_S_contig12423.2011.1|Name=mRNA_Ecto-sp13_S_contig12423.2011.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=648bp|location=Sequence derived from alignment at Ecto-sp13_S_contig12423:201..4844- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |