mRNA_Ecto-sp13_S_contig866.20103.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig866.20103.1
Unique NamemRNA_Ecto-sp13_S_contig866.20103.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig866.20103.1 vs. uniprot
Match: A0A6H5L7P6_9PHAE (Rhodanese domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7P6_9PHAE)

HSP 1 Score: 734 bits (1895), Expect = 7.170e-256
Identity = 416/634 (65.62%), Postives = 432/634 (68.14%), Query Frame = 1
Query:  373 MGAARSAPTLLRRCLSLLLHLRLQMQMGMVCGFLVPSRP----GIETSNIIRPPLTAATSYTTVAAASGAGAEGTSCTTASVGGTAVGESTAFQTQTAPSVGAA--SPDPLATPSDFQEFAGRRKSGSRKVVLDLRPRADFHREHLEGSTSIPIDELELRLLELPPPFAQPMNIVGSQPVCKRVL*SKFYFAVRLVVRPTQLTSTAAVYVDGSVGHAGCCPLLDRSNNFIGAYSM*PLPGL*TMYS*RFHVPLYMCTNPGPRRGSVGLKNSRNSEAARKPKTDAI*HANQNCRLKFAGGNNSGETSKGCEFGF*KTWVK*WVPVVPQELRIARGFLTNKGWQIDKEIDLSVA-CTKDPADVTEAWPTDTGSTSLQVWRANDFLEFCMDRFVLPSAHDAGPFPGKGLVLDLGCGSGRDTVYMAQRLPPGIRVVGVDNHSFALERGARLAERWLEDTSSGEVVGGSGQGGGREEGATRSQHEIQTGCLGGVRSRAVGRSDTDGNEWATQGKRSEARQRACEWSLADLRKEGSLDGMRASIVHGHRFKCERLLPLLRDHVLLPGGFFIWSTFLDTGSENLVPPWRPSRMMR*PGELADIFSGDDFEILVDEQGELPTRGATVPANFFACQKRSTKRT 2253
            MGAARSAPTLL  CLSLLL L LQMQMGMVCGFLVPS+P     IE SNIIRPP TAATSYTTVAAAS AGA  TS T ASV GTAVGEST  QT+T PSVGAA  SPDP A PS+FQE+ GRRKSGSR+VVLDLRPRADF REHLEGSTSIPIDELE RLLELPPPFAQP+NIVGSQ                                                                                                                                                    QELR+AR FLTNKGWQID+EIDLSVA C  +PA  TEAWPT+TGSTSLQVWRANDFLEFCMDRFVLPSAHDAGPFPGKGLVLDLGCGSGRDTVYMAQRLPPG RVVGVDNHS+ALERGARLAERWLEDTSSG+VVGGSG GGG EEGATRSQ E QTGCLGGVRSRA GRSDTDG E  TQG+  E RQRACEWSL DLRKEGSLD MRASIVHGHRFKCERLLPLLRDHVLLPGG+FIWSTFLDTGSENLVPPWRPSRMMR PGELADIFSGD FEILVDEQGELPTRG+TVPANFF C+K  T  T
Sbjct:    1 MGAARSAPTLLHWCLSLLLQLLLQMQMGMVCGFLVPSQPRGMPSIEKSNIIRPPPTAATSYTTVAAASRAGAGATSFTMASVAGTAVGESTTSQTRTVPSVGAAGASPDPFAKPSEFQEYVGRRKSGSRRVVLDLRPRADFRREHLEGSTSIPIDELEPRLLELPPPFAQPVNIVGSQ----------------------------------------------------------------------------------------------------------------------------------------------------QELRMARDFLTNKGWQIDEEIDLSVAACVNNPAHPTEAWPTETGSTSLQVWRANDFLEFCMDRFVLPSAHDAGPFPGKGLVLDLGCGSGRDTVYMAQRLPPGTRVVGVDNHSYALERGARLAERWLEDTSSGKVVGGSGNGGGSEEGATRSQRETQTGCLGGVRSRAGGRSDTDGREGTTQGQPPEVRQRACEWSLTDLRKEGSLDAMRASIVHGHRFKCERLLPLLRDHVLLPGGYFIWSTFLDTGSENLVPPWRPSRMMR-PGELADIFSGDGFEILVDEQGELPTRGSTVPANFFICRKLPTTCT 485          
BLAST of mRNA_Ecto-sp13_S_contig866.20103.1 vs. uniprot
Match: D7FQG6_ECTSI (Tellurite resistance methyltransferase, TehB, core n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQG6_ECTSI)

HSP 1 Score: 697 bits (1799), Expect = 2.470e-241
Identity = 396/630 (62.86%), Postives = 414/630 (65.71%), Query Frame = 1
Query:  373 MGAARSAPTLLRRCLSLLLHLRLQMQMGMVCGFLVPSRPG-----IETSNIIRPPLTAATSYTTVAAASGAGAEGTSCTTASVGGTAVGESTAFQTQTAPSVGAA--SPDPLATPSDFQEFAGRRKSGSRKVVLDLRPRADFHREHLEGSTSIPIDELELRLLELPPPFAQPMNIVGSQPVCKRVL*SKFYFAVRLVVRPTQLTSTAAVYVDGSVGHAGCCPLLDRSNNFIGAYSM*PLPGL*TMYS*RFHVPLYMCTNPGPRRGSVGLKNSRNSEAARKPKTDAI*HANQNCRLKFAGGNNSGETSKGCEFGF*KTWVK*WVPVVPQELRIARGFLTNKGWQIDKEIDLSVA-CTKDPADVTEAWPTDTGSTSLQVWRANDFLEFCMDRFVLPSAHDAGPFPGKGLVLDLGCGSGRDTVYMAQRLPPGIRVVGVDNHSFALERGARLAERWLEDTSSGEVVGGSGQGGGREEGATRSQHEIQTGCLGGVRSRAVGRSDTDGNEWATQGKRSEARQRACEWSLADLRKEGSLDGMRASIVHGHRFKCERLLPLLRDHVLLPGGFFIWSTFLDTGSENLVPPWRPSRMMR*PGELADIFSGDDFEILVDEQGELPTRGATVPANFFACQKR 2238
            MGAARS PTLL RCLSLLL      QMGMVC F+VP  P      IETSN IRP  T ATSYTTV AAS AGAE TSCTTA V GTA  +S   QT+T P  GAA  SPDP AT S+FQEF GRRKSGSR+VVLDLRPRADF REHLEGSTSIP+DELE RLLELPPPFAQP+NIVGSQ                                                                                                                                                    QELR AR FLTNKGWQI++E+DLSVA CTKDPA  TEAWPT+TGSTSLQVWRANDFLEFCMDRFVLPS HDA PFPGKGLVLDLGCGSGRDTVYMAQRLPPG RVVGVDNHS+ALERGARLAERWLEDTSSGEV GG       E+GATRSQ E QTGCLGGV S AVGRSDTDG+E AT+G   E RQRACEWSLADLRKEGSLDGMRASIVHGHRFKCERLLPLLRDHVLLPGG+FIWSTFLDTGSENLVPPWRPSRMMR PGELADIFSGD FEILVDEQGELPTRG+TVPANFFAC+KR
Sbjct:    1 MGAARSTPTLLHRCLSLLLXXXXXXQMGMVCCFVVPPHPSGGIPSIETSNSIRPLPTTATSYTTVVAASRAGAEATSCTTAIVAGTAADDSIKSQTRTTPCAGAAGASPDPFATRSEFQEFVGRRKSGSRRVVLDLRPRADFRREHLEGSTSIPVDELEPRLLELPPPFAQPVNIVGSQ----------------------------------------------------------------------------------------------------------------------------------------------------QELRTARDFLTNKGWQIEEEVDLSVAACTKDPAHPTEAWPTETGSTSLQVWRANDFLEFCMDRFVLPSGHDASPFPGKGLVLDLGCGSGRDTVYMAQRLPPGTRVVGVDNHSYALERGARLAERWLEDTSSGEVAGGXXXXXXXEQGATRSQQETQTGCLGGVTSGAVGRSDTDGSEGATKGNPPEVRQRACEWSLADLRKEGSLDGMRASIVHGHRFKCERLLPLLRDHVLLPGGYFIWSTFLDTGSENLVPPWRPSRMMR-PGELADIFSGDGFEILVDEQGELPTRGSTVPANFFACRKR 481          
BLAST of mRNA_Ecto-sp13_S_contig866.20103.1 vs. uniprot
Match: A0A835YXG6_9STRA (Rhodanese domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXG6_9STRA)

HSP 1 Score: 179 bits (454), Expect = 6.230e-45
Identity = 119/303 (39.27%), Postives = 146/303 (48.18%), Query Frame = 1
Query: 1348 ARGFLTNKGWQIDKEIDLSVACTKDPADVTEAWPTDTGSTSLQVWRANDFLEFCMDRFVLPSAHDAGPFPGKGLVLDLGCGSGRDTVYMAQRLPPGIRVVGVDNHSFALERGARLAERWLEDTSSGEVVGGSGQGGGREEGATRSQHEIQTGCLGGVRSRAVGRSDTDGNEWATQGKRSEARQRACEWSLADLRKE--GSLDGMRASIVHGHRFKCERLLPLLRDHVLLPGGFFIWSTFLDTGSE-NLVPPWRPSRMMR*PGELADIFSGDD--FEILVDEQGELPTRGATVPANFFACQKRS 2241
            ARG L   GW I +E D+         ++        G  S QVWR NDFL+F + ++VLP           GL LDLGCG+GRD V++AQ+LPPG RVVGVDNH  AL+R A LA RW  D                                        GR                     C W   DLRK    SLD + A I+HGHRF  + L+   RD + + GGFF+W TF+  G E NL PP +PSRM+   GEL  IFS     +++L DE GEL TRG  VPANFF  Q+ S
Sbjct:  226 ARGVLEAGGWTIGEETDVEGGQGMAGVELQ------VGGESPQVWRPNDFLDFALHKYVLPDIVHGDR--RTGLALDLGCGNGRDAVFLAQKLPPGWRVVGVDNHKGALQRCAELASRWSRD----------------------------------------GR---------------------CFWLCRDLRKNTASSLDDLPADIIHGHRFMDKPLMAAARDRLPV-GGFFVWGTFMQLGEEQNLAPPHKPSRMVA-HGELHRIFSSGSATYKVLHDEAGELNTRGVPVPANFFVAQRVS 457          
BLAST of mRNA_Ecto-sp13_S_contig866.20103.1 vs. uniprot
Match: A0A5J4Z1S4_PORPP (Rhodanese domain-containing protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z1S4_PORPP)

HSP 1 Score: 133 bits (335), Expect = 3.360e-30
Identity = 98/303 (32.34%), Postives = 132/303 (43.56%), Query Frame = 1
Query: 1357 FLTNKGWQIDKEIDLSVACTKDPADVTEAWPTDTGSTSLQVWRANDFLEFCMDRFVLP-SAH---DAGPFPGKGLVLDLGCGSGRDTVYMAQRLPPGIRVVGVDNHSFALERGARLAERWLEDTSSGEVVGGSGQGGGREEGATRSQHEIQTGCLGGVRSRAVGRSDTDGNEWATQGKRSEARQRACEWSLADLRKEGSLDGMRASIVHGHRFKCERLLPLLRDHVLLPGGFFIWSTFLDTG--SENLVPPWRPSRMMR*PGELADIFSGDD----FEILVDEQGELPTRGATVPANFFACQK 2235
            FLT KGWQ D    L +    D A     + T+TG  +  VWR N+FLE       LP SA+   +        + LDLGCGSGRD V++   LP   RV+G DNHS+ALER   LA+R   D                                                               C   L D  +   L   +A +VHG RF    LL  +RDHV+  GG FIWSTF+ +   + N+ PP++  R++  PGEL ++F        +E++ +  G   TRG  VPA FFAC++
Sbjct:  116 FLTAKGWQCDVRECLLLGT--DEASAFSRFKTETGRCTAVVWRPNEFLEQLFSSGPLPLSAYLRAEQQKLTEAPVALDLGCGSGRDLVFLKMHLPGRWRVMGFDNHSYALERAKALAQRASVDVE------------------------------------------------------------VCTVDLTDELQAARLP--KAHLVHGCRFLHRPLLRHVRDHVIHVGGIFIWSTFVQSAESARNMAPPYKEKRVLA-PGELREMFLVPSLHVQYELIEERDGVFLTRGVPVPATFFACRR 353          
BLAST of mRNA_Ecto-sp13_S_contig866.20103.1 vs. uniprot
Match: A0A7S1J5A0_9EUGL (Hypothetical protein (Fragment) n=2 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1J5A0_9EUGL)

HSP 1 Score: 135 bits (339), Expect = 7.150e-30
Identity = 97/285 (34.04%), Postives = 131/285 (45.96%), Query Frame = 1
Query: 1339 LRIARGFLTNKGWQIDKEIDLSVACTKDPADVTEAWPTDTGSTSLQVWRANDFLEFCMDRFVLPSAHDAGPFPGKGLVLDLGCGSGRDTVYMAQRLPPGIRVVGVDNHSFALERGARLAERWLEDTSSGEVVGGSGQGGGREEGATRSQHEIQTGCLGGVRSRAVGRSDTDGNEWATQGKRSEARQRACEWSLADLRKEGSLDGMRASI--VHGHRFKCERLLPLLRDHVLLPGGFFIWSTFLDTGSENLVPPWRPSRMMR*PGELADIFSGDDFEILVDEQGEL 2187
            L++A+  L +KGW ++  + L  A  +  A++      +TG+ S+ +WR ++FLE  +D  +     D G        +DLGCGSGRD VY+AQRLP   +V GVDNH  AL R   LA+R                                     GV+   +                             DLRK GS+      I  VHG RF    LL  +RDH+L  GG FIWSTF++ G ENL PP++PSR +  PGEL   F    + IL DE+GEL
Sbjct:  254 LQVAQELLESKGWAVEDAMTLQQALGQWGAEL------ETGAYSVPIWRPSEFLEEVLD--ICLENMDLGSEAAYTTAVDLGCGSGRDLVYLAQRLPSHWKVYGVDNHGNALIRSEALAQR------------------------------------AGVQVHTLN---------------------------CDLRKPGSMQEFYGCIALVHGARFLDRGLLLEVRDHLLADGGIFIWSTFME-GEENLAPPFKPSRRLL-PGELRQTFQSAGYTILWDEEGEL 465          
BLAST of mRNA_Ecto-sp13_S_contig866.20103.1 vs. uniprot
Match: A0A0G4I8J9_9ALVE (Methyltransf_25 domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I8J9_9ALVE)

HSP 1 Score: 117 bits (292), Expect = 1.730e-24
Identity = 105/329 (31.91%), Postives = 136/329 (41.34%), Query Frame = 1
Query: 1336 ELRIARGFLTNKG--WQIDKEIDLSVACTK-----DPADVTEAWPTDTGSTSLQVWRANDFLEFCMDRFVLPSAHDAGPFPGKGLV-LDLGCGSGRDTVYMAQRLPPGIRVVGVDNHSFALERGARLAERWLEDTSSGEVVGGSGQGGGREEGATRSQHEIQTGCLGGVRSRAVGRSDTDGNEWATQGKRSEARQRACEWSLADLRKEGSL--DGMR----------ASIVHGHRFKCERLLPLLRDHVLLPGGFFIWSTFLDTGSENLV----PPWRPSRMMR*PGELADIFSGDD----FEILVDEQGELPTRGATVPANFFACQKR 2238
            E + A+ F    G  W + + I  S A  +      PAD  +  P        + WRAN FLEFC+ +F  P   +AG   G+G V LDLGCG+GRD V++A +   GIRVVG DNH  AL R   L                                    G  G                              CEW   DLRK G    D  R            ++HGHRF   RLLP+ RD +L   G F+WSTF     E L     PP++  R++R  GEL ++F        FEI+ DE G L + G  V A+FF  +K+
Sbjct:  111 ECQKAKLFTKQGGCQWTVSECITKSEAINRMVKEGAPADKFQRGPLGVN----EGWRANVFLEFCLKKFA-PVFEEAG---GEGRVALDLGCGNGRDGVFLAAKT--GIRVVGSDNHDGALARARALT--------------------------------ADLGLAG-----------------------------LCEWKQCDLRKNGKSVEDCQRELLREDRSESVGLIHGHRFLERRLLPVCRD-LLACRGLFVWSTFASVDGEILEERPGPPYKAGRLLR-EGELREVFESSKSDCCFEIIFDEMGTLLSHGVEVNAHFFLARKK 366          
BLAST of mRNA_Ecto-sp13_S_contig866.20103.1 vs. uniprot
Match: R1EYM2_EMIHU (Rhodanese domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1EYM2_EMIHU)

HSP 1 Score: 107 bits (267), Expect = 1.840e-21
Identity = 91/291 (31.27%), Postives = 123/291 (42.27%), Query Frame = 1
Query: 1336 ELRIARGFLTNKGWQIDKEIDLSVACTKDPADVTEAWPTDTGSTSLQVWRANDFLEFCMDRFVLPSAHDAGPFPGKGLVLDLGCGSGRDTVYMAQRLPPGIRVVGVDNHSFALERGARLAERWLEDTSSGEVVGGSGQGGGREEGATRSQHEIQTGCLGGVRSRAVGRSDTDGNEWATQGKRSEARQRACEWSLADLRKEG--SLDGMRASIVHGHRFKCERLLPLLRDHVLLPGGFFIWSTFLDTGSENLVPPWRPSRMMR*PGELADIFSGD-DFEILVDEQGELPTRG 2199
            EL  AR  L  KGW+ ++          D +   E   +++G  S  + R N FL   + +  LP A         G  +D+GCGSGRD V++AQ L      +GVDNH  ALER  RLA+                                  GC  GV                           +  ++LA++RK+    L     SIVHG RF    LL  L + V+ PGG  +WSTFLD       PP+RPSR ++  GE+  +F     FE+L  E+G L TRG
Sbjct:  116 ELETARALLLPKGWEFEER-------HADDSAFWEGAASESGPDSAPLLRPNAFLASALRQVDLPEA---------GAAIDVGCGSGRDAVFLAQTLGDTWETIGVDNHKGALERAQRLAD----------------------------------GC--GV---------------------------SAAFALANVRKQSLSDLTERPISIVHGCRFLDRPLLRALPE-VVAPGGLVVWSTFLDGDGPPQAPPFRPSRRLQ-RGEMEHLFGESRGFEVLRAEEGTLLTRG 325          
BLAST of mRNA_Ecto-sp13_S_contig866.20103.1 vs. uniprot
Match: A0A8K1CK47_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CK47_PYTOL)

HSP 1 Score: 99.4 bits (246), Expect = 2.330e-21
Identity = 48/83 (57.83%), Postives = 60/83 (72.29%), Query Frame = 1
Query:    1 MGSEVSRRPPVPPSVIPDQHQGSKSDFGGEVDIEEAIDKSGCSSIYYLLEDCLGEHDRDWRRCQEQVKALKACNDKKNRARAA 249
            M S+ S  PPV    IP  H GS+SDFG +VDI+E I+K GCS  YY LE+CLGE+DRDW +CQ +VKALKACND+  + + A
Sbjct:    1 MSSKKSFTPPV----IPGLHAGSQSDFGSDVDIDEMIEKMGCSKDYYKLEECLGEYDRDWTKCQVEVKALKACNDRLQKLKQA 79          
BLAST of mRNA_Ecto-sp13_S_contig866.20103.1 vs. uniprot
Match: A0A2D4BMS5_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BMS5_PYTIN)

HSP 1 Score: 97.4 bits (241), Expect = 1.670e-20
Identity = 42/73 (57.53%), Postives = 56/73 (76.71%), Query Frame = 1
Query:   31 VPPSVIPDQHQGSKSDFGGEVDIEEAIDKSGCSSIYYLLEDCLGEHDRDWRRCQEQVKALKACNDKKNRARAA 249
            VPP+V+   HQGSKSDFG ++DI++ I+K GCS  YY LE+CLGE+DRDW +CQ  VK LK CND+ ++ + A
Sbjct:    9 VPPAVVAGLHQGSKSDFGEDLDIDDMIEKMGCSKDYYALEECLGEYDRDWTKCQTYVKQLKVCNDRLHKLQQA 81          
BLAST of mRNA_Ecto-sp13_S_contig866.20103.1 vs. uniprot
Match: A0A7S1UFD9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UFD9_9STRA)

HSP 1 Score: 100 bits (248), Expect = 1.050e-19
Identity = 85/246 (34.55%), Postives = 107/246 (43.50%), Query Frame = 1
Query: 1552 FPGKGLVLDLGCGSGRDTVYMAQRLPPGIRVVGVDNHSFALERGARLAERWLEDTSSGEVVGGSGQGGGREEGATRSQHEIQTGCLGGVRSRAVGRSDTDGNEWATQGKRSEARQRACEWSLADLRKEGSLDGMRASI--------VHGHRFKCERLLPLLRDH-----VLLPGGFFIWSTFLDTGSEN----LVPPWRPSRMMR*PGELADIFS----GDDFEILVDEQGELPTRGATVPANFFA 2226
            F    + LDLGCGSGRD  ++ Q L  G RV+ VDNH  AL+R  RL          GE+V G G+G                                                   E    DLRK  +   ++A+I        VHG RF C  LL  L  H      L  GG F+WSTF D G E     L PP++ SR +R  GEL + F+    G  +E+++DE+G L TRG  VPANFFA
Sbjct:   62 FRDAAVALDLGCGSGRDAAFLGQWLR-GWRVLAVDNHKGALDRSRRL----------GELVLGKGEG-------------------------------------------------MLEVVDVDLRKADAPAALKAAIGGSGEAALVHGCRFLCADLLDELTGHGQGDCFLGVGGIFVWSTFAD-GEEKEGGPLAPPFKKSRRLR-KGELRERFTQCGGGIGYEVVLDEEGTLVTRGEAVPANFFA 245          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig866.20103.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7P6_9PHAE7.170e-25665.62Rhodanese domain-containing protein n=1 Tax=Ectoca... [more]
D7FQG6_ECTSI2.470e-24162.86Tellurite resistance methyltransferase, TehB, core... [more]
A0A835YXG6_9STRA6.230e-4539.27Rhodanese domain-containing protein n=1 Tax=Tribon... [more]
A0A5J4Z1S4_PORPP3.360e-3032.34Rhodanese domain-containing protein n=1 Tax=Porphy... [more]
A0A7S1J5A0_9EUGL7.150e-3034.04Hypothetical protein (Fragment) n=2 Tax=Eutreptiel... [more]
A0A0G4I8J9_9ALVE1.730e-2431.91Methyltransf_25 domain-containing protein n=1 Tax=... [more]
R1EYM2_EMIHU1.840e-2131.27Rhodanese domain-containing protein n=1 Tax=Emilia... [more]
A0A8K1CK47_PYTOL2.330e-2157.83Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4BMS5_PYTIN1.670e-2057.53Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A7S1UFD9_9STRA1.050e-1934.55Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig866contigEcto-sp13_S_contig866:12893..17156 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score97.8
Seed ortholog evalue2.6e-18
Seed eggNOG ortholog36331.EPrPI00000016298
Model size2957
KEGG koko:K18177
KEGG Pathwayko04714,map04714
Hectar predicted targeting categoryother localisation
Exons5
EggNOG free text desc.Coiled-coil-helix-coiled-coil-helix domain containing 8. Source PGD
EggNOG OGs1MI3S@121069,2E4K7@1,2SBFX@2759
Cds size264
COG Functional cat.S
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03029
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig866.20103.1prot_Ecto-sp13_S_contig866.20103.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig866 12893..13470 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464138.0578618-CDS-Ecto-sp13_S_contig866:12892..130901681464138.0578618-CDS-Ecto-sp13_S_contig866:12892..13090Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig866 12893..13090 +
1681464138.071887-CDS-Ecto-sp13_S_contig866:13404..134701681464138.071887-CDS-Ecto-sp13_S_contig866:13404..13470Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig866 13405..13470 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464138.0835812-UTR-Ecto-sp13_S_contig866:13470..146901681464138.0835812-UTR-Ecto-sp13_S_contig866:13470..14690Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig866 13471..14690 +
1681464138.0969021-UTR-Ecto-sp13_S_contig866:14895..154301681464138.0969021-UTR-Ecto-sp13_S_contig866:14895..15430Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig866 14896..15430 +
1681464138.108586-UTR-Ecto-sp13_S_contig866:15749..158471681464138.108586-UTR-Ecto-sp13_S_contig866:15749..15847Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig866 15750..15847 +
1681464138.1223834-UTR-Ecto-sp13_S_contig866:16316..171561681464138.1223834-UTR-Ecto-sp13_S_contig866:16316..17156Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig866 16317..17156 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig866.20103.1

>prot_Ecto-sp13_S_contig866.20103.1 ID=prot_Ecto-sp13_S_contig866.20103.1|Name=mRNA_Ecto-sp13_S_contig866.20103.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=88bp
MGSEVSRRPPVPPSVIPDQHQGSKSDFGGEVDIEEAIDKSGCSSIYYLLE
DCLGEHDRDWRRCQEQVKALKACNDKKNRARAAAGRT*
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mRNA from alignment at Ecto-sp13_S_contig866:12893..17156+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig866.20103.1 ID=mRNA_Ecto-sp13_S_contig866.20103.1|Name=mRNA_Ecto-sp13_S_contig866.20103.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4264bp|location=Sequence derived from alignment at Ecto-sp13_S_contig866:12893..17156+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGGCTCTGAGGTTTCTCGCCGCCCCCCTGTGCCTCCTTCAGTCATTCC CGATCAGCACCAGGGGTCGAAGAGTGACTTTGGTGGGGAGGTGGACATCG AAGAGGCCATCGATAAGTCTGGTTGCTCGTCCATCTACTACCTTCTGGAG GACTGCCTCGGAGAGCACGATCGAGACTGGCGACGGTGCCAAGAGCAGGT GCGACAGCAGTCCAGGCGCAACTACCGGGCAGAAGTCGTACTGGTTTGCC TGTTTTGTGCAGACAACGCACGTGGCAACCCAGGTGTAGACAGACTACTG GACCCCGGCAGTAGTGCTGCAAGAGCACAGCAGCAGCTATGTTCAACATG AGTTCCGGTTCACCGCAAGGATCCTCGGCAGCTGAGCAAACACCGCGGTG GCATCCACTAGGGGAGTGGAGTGAGATCGCTCGCATAGTTGGTTTGACGT ATTCCATGCCCCTACTATTGTGCCTGTTCCCGTCGAACCCCATCGCCCCT TCTGCATTTCAGGTGAAAGCTCTCAAGGCGTGCAACGACAAGAAGAACAG GGCACGGGCGGCCGCAGGAAGAACTTGAGTAGGACCGCAGCCAGCAAACC GGCCTCCCCCCCACCTTGGCCACCACATCCCGTCTGTGTCGGGGAAGTGT GCTCACTGCACACCCACCCTTTTACGTGTTCCCTAGATGGGTGCGGCAAG GAGCGCGCCGACGCTGCTGCGCCGGTGCCTCTCGCTCCTCCTGCACCTTC GGCTGCAGATGCAAATGGGCATGGTGTGTGGCTTTTTGGTTCCTTCGCGT CCAGGCATTGAAACGAGCAACATTATCCGGCCGCCCCTCACCGCCGCCAC CTCGTACACAACCGTAGCCGCAGCGTCCGGAGCCGGAGCTGAGGGGACGA GCTGCACCACGGCGAGCGTAGGAGGAACAGCAGTAGGCGAGTCGACTGCG TTTCAGACGCAGACAGCACCATCCGTCGGAGCAGCGAGTCCTGATCCTCT CGCGACGCCATCAGACTTCCAGGAGTTTGCGGGGCGGCGCAAGTCGGGCT CCCGCAAGGTGGTGCTCGACCTTCGGCCTAGGGCGGACTTTCATCGGGAG CACCTCGAGGGATCAACGTCCATCCCCATCGACGAGCTGGAGCTCAGGCT CTTGGAGTTGCCTCCTCCCTTCGCCCAGCCAATGAACATTGTCGGCAGCC AACCGGTTTGCAAACGTGTCTTATAGAGCAAGTTTTATTTTGCAGTTCGC TTAGTCGTAAGACCCACGCAACTGACGAGCACTGCTGCTGTATATGTTGA CGGTAGTGTGGGTCATGCCGGTTGTTGTCCGTTACTGGACCGTAGCAATA ATTTCATCGGAGCCTACAGTATGTAGCCGTTACCAGGGTTGTGAACTATG TATAGTTGACGCTTTCATGTCCCCCTTTACATGTGCACAAACCCGGGACC TCGGAGAGGATCTGTCGGTTTGAAGAATTCCCGTAACAGTGAGGCTGCGC GAAAACCTAAGACAGATGCAATTTGACATGCAAACCAAAACTGCAGGCTA AAATTCGCTGGAGGAAATAATTCTGGCGAAACGTCGAAAGGGTGTGAGTT TGGTTTCTAAAAAACTTGGGTAAAATGATGGGTGCCTGTCGTTCCGCAGG AGCTTCGAATTGCGAGGGGCTTCCTCACGAACAAAGGCTGGCAGATCGAC AAAGAAATAGACCTGTCAGTGGCTTGTACAAAAGACCCGGCAGATGTGAC TGAAGCCTGGCCCACCGACACTGGGTCGACCTCCCTCCAGGTATGGAGGT GAGAAGCCACAGGAGGCTGAGAACCGTTTCCTCATTGTTGGTCTCATGTT TTGGCGGGTGGGAGGGGGATCGAATGCTCTATTTTTTTTTTCATTTTTAT CGTCGTGCGGCATTGTCTCCCTGAGAAACTTTCCTGTACCCGTTTCTACC CTACACCGCTTAGCACACACGCTGCCGCTGTTGCTCTGTTGTTTCTTGGC CAGGGCAAACGATTTCCTGGAGTTTTGTATGGACCGCTTCGTGCTGCCTT CGGCCCATGACGCCGGCCCTTTCCCCGGCAAAGGCCTGGTCCTAGACTTG GGCTGTGGCAGCGGCCGTGACACCGTCTACATGGCGCAGCGCCTGCCTCC TGGCATCCGCGTAGTCGGGGTCGACAACCACTCGTTCGCTCTGGAAAGGG GCGCGAGACTGGCCGAACGGTGGCTGGAAGACACGTCTTCGGGGGAAGTT GTTGGTGGCAGTGGTCAAGGTGGCGGCCGCGAAGAAGGCGCGACGCGATC GCAACACGAAATCCAGACCGGCTGTTTGGGAGGGGTTAGAAGTCGGGCCG TCGGACGGAGCGATACCGACGGCAACGAATGGGCAACGCAGGGAAAACGC TCGGAAGCGCGACAAAGGGCGTGCGAGTGGTCGCTCGCCGACCTCAGGAA AGAGGGTTCGCTTGACGGAATGCGGGCTTCTATTGTCCACGGGCACCGGT TCAAGTGCGAGCGTCTGTTGCCTCTACTTCGAGATCATGTGAGGGACTAC GTGGGCCACAAATTGGCCCTTCGCCTCGTTGACTTTTCCATGTCCGGCCC ACACACTGCTGAAAAAAGTTATCGAGGCATCTACAAACCTGACTGCGCTG TCGGTGGTGAACAGCTTGGGGTCCTAGGACTGGAGCTGAAAATGTATCGT GGTACCGCTTTTTGTCGCGTCCTTTGTCGAGCTTGTATCATGTCGTTGGT TGCCATGCACTTCTCCTTTCCCGTTTACGGCATACCTAACGTCCATGCAC ACGTGTTCAGCTAGCCCGTTCGCCCGTTCATTCGTATTTCCGCGCTGTTG TAAATAGGTGCTACTCCCAGGGGGCTTTTTTATCTGGTCTACGTTTTTGG ACACGGGGTCGGAGAATTTAGTGCCGCCATGGCGACCGAGTCGCATGATG AGGTAGTTGCCACCCGCGCGTTATTCGGCCAAAAGCGCCGTGTCTCGCGG TGATTGGTCGAGTCGGCTCTGGGTTTTCCTCATACGGCCTGTCCGTCTTC GCACTTCAACATATGAATCACAGCTGTTTTGAAAGCGTTGTGGGTCCTGC CGGAATGGAGGCCCTCTCGTTTTCGCCTTTCTGCACCGTCCGGATGGTTC TCTAGGGTTTCGTCGTTCACAGGTTTTCGCAGAGAATGATGCCCGTTTGT GGAGCAAAGCGTTGGCAGTCAGCTATTAATTGTGGACTGCTGTTGACGCT CCCCGCTTGGGCAATGACAGCCACGCAAGCACGCCAACCTCACTTCTCGT TGAGGGTGTGAAATCGACCGATTATTTCTGTTCTATTTCGCCATCTCTGT CCCGTGCCTGCGCAAACTCGCCGTTTCGTTATGCGCAACACCACACTTTG TGCTGGGTCCGGTTTCTTGTCAAGACCCGGCGAGCTGGCGGACATCTTCT CTGGTGATGATTTCGAGATCCTGGTCGACGAACAGGGGGAACTACCGACG CGGGGCGCCACGGTGCCAGCGAATTTCTTCGCCTGCCAAAAGCGATCGAC GAAACGGACGACGGGAGAGTAATACTGCTACTGTACCACTTTGCTGCTGC TTGTTGGGTTCCAGAGAGGTTTGGTACAAATGGTATGAAATCATGTACTG GGGACTGCATACGACCCAGCTGCTGTGTGTTGCAGCCTACGCCGTTTGGG AGGGTCATGTTGAAGCAGCAGTTGCAGGTCGTTTACTCTAGGGAGCACCT TATGCTCCTTTGCCCTGCTCGGTTTGCCAGCCATGTGCCCTGTCATGTTG ACAATGATAACTGCACGAGCTGCACGTTCGCGCACAAGTTTGGGTATCCG TGAGCGGTATCGTTGCGTGTCGAGTGTATTGGGACGGAGAAAAACAAGTG TGAGATCGTTTGTCGTCCAATCGGTACCGAGCTTCGCGATGCGTCCGGTT TTTTCCAACCTAACGCTCGTCAGTTTGCCGTGTACTTATGTAAAACGAGT TTTGCGCCGATCTCTTCACGACCATTGAGAGTGGTGCGGTTGCGCTAGGT TCGGTAATGGTTCCCCCGGATGGTGGGAATCCTGCGACGTGGAACGAAGA AGGTATACACATCAAAGAATACTTTGTGCCGAAGGGTGGGAGCGACAGTT TAAGTAGGTTGATTCGATCTGGCAGACAATCGTGCCAGACTGATCTTTGT GGTACGTAACTGAACCCATCAGTCTCCAACTTGTTATTTTGATCATTCCT TTTTTTCTTTTCTT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig866:12893..17156+

>mRNA_Ecto-sp13_S_contig866.20103.1 ID=mRNA_Ecto-sp13_S_contig866.20103.1|Name=mRNA_Ecto-sp13_S_contig866.20103.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=264bp|location=Sequence derived from alignment at Ecto-sp13_S_contig866:12893..17156+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGGCTCTGAGGTTTCTCGCCGCCCCCCTGTGCCTCCTTCAGTCATTCC
CGATCAGCACCAGGGGTCGAAGAGTGACTTTGGTGGGGAGGTGGACATCG
AAGAGGCCATCGATAAGTCTGGTTGCTCGTCCATCTACTACCTTCTGGAG
GACTGCCTCGGAGAGCACGATCGAGACTGGCGACGGTGCCAAGAGCAGGT
GAAAGCTCTCAAGGCGTGCAACGACAAGAAGAACAGGGCACGGGCGGCCG
CAGGAAGAACTTGA
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