prot_Ecto-sp13_S_contig12420.2009.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12420.2009.1
Unique Nameprot_Ecto-sp13_S_contig12420.2009.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length283
Homology
BLAST of mRNA_Ecto-sp13_S_contig12420.2009.1 vs. uniprot
Match: D8LL30_ECTSI (VPS9 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL30_ECTSI)

HSP 1 Score: 464 bits (1195), Expect = 2.940e-158
Identity = 253/273 (92.67%), Postives = 256/273 (93.77%), Query Frame = 0
Query:    1 QVFDQAYGLAADPGRDSSISTRLRSLGFLTEEHLGVPPLVNAEEDGAPTWADAEAQLLNMSRMRCPGDMLRCIVKCTRIVAGLLTGDRAAGGALPGADDFLPALILLVKRANPPDLHSTLEFVQSFRDPSKLLSEAGYVLTQLVSAVCFLEEVDASVLSIAHGDFERGLIQGFQESARVGLQAHQQEVKKEEEHARLLHSNFQGRANGPISGSATTSDSLSPPPSGDHASAGMXXXXXXXXXXEASAGSPGPTLLPQPEPPRTIGTAEVRARR 273
            +VFDQAYGLAADPGRDSSISTRLRSLGFLTEEHLGVPPLV+A+EDGA TWADAEAQLL MSRMRCPGDMLRCIVKCTRIVAGLLTGDRAAGGALPGADDFLPALILLVKRANPP LHSTLEFVQSFRDPSKLLSEAGYVLTQLVSAVCFLEEVDASVLSIAHGDFERGLIQGFQESARVGLQAHQQEVKKEEEHARLLHSN QGRANGPI GSATTS SLSPPPSGDHAS   XXXXXXXXXX     SPGP  LPQPEPPRTIGTAEVR RR
Sbjct:  273 KVFDQAYGLAADPGRDSSISTRLRSLGFLTEEHLGVPPLVDAQEDGALTWADAEAQLLKMSRMRCPGDMLRCIVKCTRIVAGLLTGDRAAGGALPGADDFLPALILLVKRANPPGLHSTLEFVQSFRDPSKLLSEAGYVLTQLVSAVCFLEEVDASVLSIAHGDFERGLIQGFQESARVGLQAHQQEVKKEEEHARLLHSNSQGRANGPIPGSATTSASLSPPPSGDHASXXXXXXXXXXXXXXXXXXSPGPASLPQPEPPRTIGTAEVRTRR 545          
BLAST of mRNA_Ecto-sp13_S_contig12420.2009.1 vs. uniprot
Match: A0A7S2G2K9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G2K9_9STRA)

HSP 1 Score: 129 bits (325), Expect = 1.210e-31
Identity = 74/169 (43.79%), Postives = 107/169 (63.31%), Query Frame = 0
Query:   15 RDSSISTRLRSLGFLTEEHLGVPPLVNAEEDGAPTWADAEAQLLNMSRMRCPGDMLRCIVKCTRIVAGLLTGDRAAGG--ALPGADDFLPALILLVKRANPPDLHSTLEFVQSFRDPSKLLSEAGYVLTQLVSAVCFLEEVDASVLSIAHGDFERGLIQGFQESARVGL 181
            +++ +  R++SL F++ EHL +     +EE+    WA AE  + ++SR   P   ++ IV+ +R +  +LT      G  ALPGADDFLPA+IL+VKRANPP LHS L+ +  +  P +L+SEAGYV T L SAV FL  +DA+ LSI   DF+RG+ +  QE AR  +
Sbjct:  129 QNTELFGRIKSLAFISVEHLEMTARPKSEEE----WATAEGMIRSLSREAGPTAKIQIIVELSREIMRVLTEACQQNGSHALPGADDFLPAMILVVKRANPPTLHSDLKLIYQYSAPVRLMSEAGYVFTHLQSAVAFLRTLDATALSITPSDFDRGM-RRCQEQARQDM 292          
BLAST of mRNA_Ecto-sp13_S_contig12420.2009.1 vs. uniprot
Match: W4G1T2_9STRA (VPS9 domain-containing protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G1T2_9STRA)

HSP 1 Score: 126 bits (317), Expect = 2.060e-29
Identity = 74/172 (43.02%), Postives = 104/172 (60.47%), Query Frame = 0
Query:    2 VFDQAYGLA--ADPGRDSSISTRLRSLGFLTEEHLGVPPLVNAEEDGAPTWADAEAQLLNMSRMRCPGDMLRCIVKCTRIVAGLLTGDRAAGGALPGADDFLPALILLVKRANPPDLHSTLEFVQSFRDPSKLLSEAGYVLTQLVSAVCFLEEVDASVLSIAHGDFERGLIQ 171
            V ++ +G A  A P  D+++S R+ SLGFL+ EHL +     A  D A  W   +A+L  + R   P   + CI++    +  LL      GG  PGADDFLPALI  + +ANPP+LHST+ ++Q +R PSKL+SE GY  T +VS++ FLE +D S LSI+  +F  GL Q
Sbjct:  259 VMEKLHGAAFGACPQEDAALSQRIASLGFLSFEHLDI----TATSDVA-RWTCIQARLSQLPRFLSPRRQMACILQVCHDLTHLLKDH--LGGKYPGADDFLPALIYTILKANPPNLHSTVAYIQMYRHPSKLMSEPGYFFTHVVSSLSFLEHLDDSGLSISPEEFHLGLQQ 423          
BLAST of mRNA_Ecto-sp13_S_contig12420.2009.1 vs. uniprot
Match: A0A024TYA3_9STRA (VPS9 domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TYA3_9STRA)

HSP 1 Score: 125 bits (314), Expect = 4.340e-29
Identity = 71/170 (41.76%), Postives = 104/170 (61.18%), Query Frame = 0
Query:    2 VFDQAYG--LAADPGRDSSISTRLRSLGFLTEEHLGVPPLVNAEEDGAPTWADAEAQLLNMSRMRCPGDMLRCIVKCTRIVAGLLTGDRAAGGALPGADDFLPALILLVKRANPPDLHSTLEFVQSFRDPSKLLSEAGYVLTQLVSAVCFLEEVDASVLSIAHGDFERGL 169
            + ++ +G    A P  D+++S R+ SLGFL+ +HL +     A  D A  W   +A+L+ + R   P   + CI++    +  LL      GG  PGAD+FLPALI  + +ANPP LHST+E++Q++R PSKLLSE GY  T LVS++ FL+ +D S LSI+  +F  GL
Sbjct:  250 LMEKLHGAVFGARPQEDANLSARIASLGFLSFQHLDI----TATSDLA-RWTLIQARLMELPRYLSPRRQMACILQVCHDLTHLLKDH--LGGKYPGADEFLPALIYTILKANPPHLHSTVEYIQTYRHPSKLLSEPGYFFTHLVSSLSFLDHLDDSGLSISAEEFHDGL 412          
BLAST of mRNA_Ecto-sp13_S_contig12420.2009.1 vs. uniprot
Match: A0A7S2W9D2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W9D2_9STRA)

HSP 1 Score: 125 bits (315), Expect = 4.450e-29
Identity = 76/174 (43.68%), Postives = 103/174 (59.20%), Query Frame = 0
Query:   15 RDSSISTRLRSLGFLTEEHLGVPPLVNAEED--GAPT--------WADAEAQLLNMSRMRCPGDMLRCIVKCTRIVAGLLTGDRAAGGALPGADDFLPALILLVKRANPPDLHSTLEFVQSFRDPSKLLSEAGYVLTQLVSAVCFLEEVDASVLSIAHGDFERGLIQGFQESAR 178
            +D  +  RLRSL F+   HL +  L    +   G P+        W ++   L  MS    P   +  +V+C++ +A +LT   A  G LPGADDFLPA+IL+VK+ANP  LHS L F+Q+F    +LLSEAGY+ T L SAV FL++VDA+ L+I   +FE G IQ  QE AR
Sbjct:  251 QDRDLERRLRSLAFIDAAHLDIKSLQQEYQSSMGQPSNEAREDEMWQESITCLRKMSAEYGPTAKIDQVVRCSKSIASVLT--TAMRGKLPGADDFLPAMILVVKKANPSRLHSNLTFIQTFAPQHRLLSEAGYIFTHLSSAVAFLQDVDANALTITSEEFEAG-IQRSQEQAR 421          
BLAST of mRNA_Ecto-sp13_S_contig12420.2009.1 vs. uniprot
Match: A0A836C806_9STRA (VPS9 domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C806_9STRA)

HSP 1 Score: 123 bits (308), Expect = 7.150e-29
Identity = 78/193 (40.41%), Postives = 106/193 (54.92%), Query Frame = 0
Query:    1 QVFDQAYGLAADPGRDSSISTRLRSLGFLTEEHLGVPPLVNAEEDGAP----TWADAEAQLLNMSRMRCPGDMLRCIVKCTRIVAGLLT----GDRAAGGAL---------------PGADDFLPALILLVKRANPPDLHSTLEFVQSFRDPSKLLS-EAGYVLTQLVSAVCFLEEVDASVLSIAHGDFERGL 169
            +++D  + LAAD  RD++ + RL+SL F+  EHL + PLV+    GA      W+   A LL +  +R PGD L C++ C   VA +L      D   G +                PGAD+ LPALI LVK  NPP L S LE++Q+F  P +L++  A Y LTQL SA+ FLE  DA  LS+   +FER L
Sbjct:  208 KLYDVTFRLAADDARDAATALRLQSLSFVGFEHLDMAPLVSGA--GASHADLDWSAPRAHLLRLDGLRSPGDKLACVLACFDAVADVLRRALGADDEDGSSXXXXXXXXXXXXXXREPGADELLPALIYLVKSTNPPRLASNLEYLQTFAAPERLVAGRASYALTQLASALHFLENADAGALSMDPEEFERRL 398          
BLAST of mRNA_Ecto-sp13_S_contig12420.2009.1 vs. uniprot
Match: A0A7S1GFG9_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GFG9_9STRA)

HSP 1 Score: 118 bits (295), Expect = 3.120e-28
Identity = 67/167 (40.12%), Postives = 96/167 (57.49%), Query Frame = 0
Query:    4 DQAYGLAADPGRDSSISTRLRSLGFLTEEHLGVPPLVNAEEDGAPTWADAEAQLLNMSRMRCPGDMLRCIVKCTRIVAGLLTGDRAAGGALPGADDFLPALILLVKRANPPDLHSTLEFVQSFRDPSKLLSEAGYVLTQLVSAVCFLEEVD---ASVLSIAHGDFER 167
            ++A+    DP  D++++ +LRSL +LT + + VP     E         A+ +L  ++  R P + L CIVK   I+   L   R  G + PGADDF P  I +V RA+P  LHS LEF+  FRD + L+S+AGY LT L SAV FLE +D   AS +++   +FER
Sbjct:   79 ERAFESTEDPDADAALAAKLRSLQWLTMDDVDVPKTCRNEV----VLNLAQGELARVNSRRTPAEKLECIVKAATIIFSALNLSRGDGDSRPGADDFFPVFIYVVLRASPARLHSNLEFIGEFRDEAALMSKAGYCLTNLRSAVAFLETLDGDGASAVNLTKEEFER 241          
BLAST of mRNA_Ecto-sp13_S_contig12420.2009.1 vs. uniprot
Match: A0A1Y1IEC5_KLENI (Vacuolar sorting protein 9, (VPS9) n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IEC5_KLENI)

HSP 1 Score: 122 bits (307), Expect = 7.790e-28
Identity = 71/176 (40.34%), Postives = 102/176 (57.95%), Query Frame = 0
Query:    1 QVFDQAYG-LAADPGRDSSISTRLRSLG-FLTEEHLGVPPLVNAEEDGAPTWADAEAQLLNMSRMRCPGDMLRCIVKCTRIVAGLLTG-DRAAGGALPGADDFLPALILLVKRANPPDLHSTLEFVQSFRDPSKLLSEAGYVLTQLVSAVCFLEEVDASVLSIAHGDFERGLIQGF 173
            +VF +A+G + AD   D  ++ R+ +L  FL  EHL +P     E    P+W  A+ +L  +   + P D L CI+ C R++  LL     AA G  PGADDFLP LI +V +ANPP LHS L+F+Q +R  S+L++E+ Y  T  VSA  F+E ++ S LSI   +FE  + Q  
Sbjct:   98 KVFARAFGPIPADAATDRLLAERMAALQQFLRPEHLDIPASFGNE----PSWLLAQKELGKLGAYKAPRDKLVCILNCCRVINNLLLNMAMAAQGDPPGADDFLPVLIYVVIKANPPALHSNLQFIQRYRAASRLVAESAYFFTNAVSAAAFIEHLNPSSLSIDPAEFESKMQQAL 269          
BLAST of mRNA_Ecto-sp13_S_contig12420.2009.1 vs. uniprot
Match: A0A485KP50_9STRA (Aste57867_9763 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KP50_9STRA)

HSP 1 Score: 120 bits (302), Expect = 2.010e-27
Identity = 67/171 (39.18%), Postives = 98/171 (57.31%), Query Frame = 0
Query:    1 QVFDQAYGLAADPGRDSSISTRLRSLGFLTEEHLGVPPLVNAEEDGAPTWADAEAQLLNMSRMRCPGDMLRCIVKCTRIVAGLLTGDRAAGGALPGADDFLPALILLVKRANPPDLHSTLEFVQSFRDPSKLLSEAGYVLTQLVSAVCFLEEVDASVLSIAHGDFERGLIQ 171
            ++ D+ +G  A    D+ ++ R+ SLGFLT  HL +    + +      W   + QL  + R   P   + CI+   + +  LL   +A  G  PGAD+FLPALI  + +ANP  LHST+ ++Q+FR PSKL+SE GY  T +VS++ FLE +D S LSI   +F  GL Q
Sbjct:  257 KLHDKVFGGGAHFDDDARLAARIASLGFLTFAHLDITATADVD-----AWTRVQTQLQTLPRYLSPRRQMDCILGVCQALTDLL---KAHLGKYPGADEFLPALIYTILKANPRHLHSTVAYIQTFRHPSKLMSEPGYFFTHVVSSLSFLEHLDDSGLSITPEEFHTGLAQ 419          
BLAST of mRNA_Ecto-sp13_S_contig12420.2009.1 vs. uniprot
Match: D8R0M8_SELML (VPS9 domain-containing protein n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8R0M8_SELML)

HSP 1 Score: 119 bits (298), Expect = 4.220e-27
Identity = 66/168 (39.29%), Postives = 100/168 (59.52%), Query Frame = 0
Query:    1 QVFDQAYG-LAADPGRDSSISTRLRSLG-FLTEEHLGVPPLVNAEEDGAPTWADAEAQLLNMSRMRCPGDMLRCIVKCTRIVAGLLTGDRAAGGALPGADDFLPALILLVKRANPPDLHSTLEFVQSFRDPSKLLSEAGYVLTQLVSAVCFLEEVDASVLSIAHGDFE 166
            ++F +AY  L +D  +D  +S ++  L  F+  EHL +P     E     +W  AE +L  ++  + P D L CI+ C R++  LL    A  G  PGA++FLPALI +V +ANPP LHS L+F++ +R  S+L++EA Y  T LVS   F+E++DA  LS+   +FE
Sbjct:   95 KIFTRAYSPLPSDSLKDQELSDKISLLQHFIKPEHLDLPQSFQNEA----SWLIAEKELQKINSYKAPRDKLVCILNCCRVINNLLL--MAKSGTPPGAEEFLPALIYVVIKANPPQLHSNLQFIERYRHSSRLVAEASYFYTSLVSVESFIEKLDAKSLSMDEAEFE 256          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12420.2009.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LL30_ECTSI2.940e-15892.67VPS9 domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A7S2G2K9_9STRA1.210e-3143.79Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
W4G1T2_9STRA2.060e-2943.02VPS9 domain-containing protein n=7 Tax=Aphanomyces... [more]
A0A024TYA3_9STRA4.340e-2941.76VPS9 domain-containing protein n=2 Tax=Aphanomyces... [more]
A0A7S2W9D2_9STRA4.450e-2943.68Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A836C806_9STRA7.150e-2940.41VPS9 domain-containing protein (Fragment) n=1 Tax=... [more]
A0A7S1GFG9_9STRA3.120e-2840.12Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A1Y1IEC5_KLENI7.790e-2840.34Vacuolar sorting protein 9, (VPS9) n=1 Tax=Klebsor... [more]
A0A485KP50_9STRA2.010e-2739.18Aste57867_9763 protein n=1 Tax=Aphanomyces stellat... [more]
D8R0M8_SELML4.220e-2739.29VPS9 domain-containing protein n=4 Tax=Selaginella... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 181..201
NoneNo IPR availablePANTHERPTHR23101RAB GDP/GTP EXCHANGE FACTORcoord: 14..168
IPR003123VPS9 domainSMARTSM00167vps9_2coord: 51..167
e-value: 3.2E-13
score: 59.9
IPR003123VPS9 domainPFAMPF02204VPS9coord: 50..154
e-value: 6.2E-24
score: 84.2
IPR003123VPS9 domainPROSITEPS51205VPS9coord: 13..159
score: 34.529
IPR037191VPS9 domain superfamilyGENE3D1.20.1050.80coord: 10..177
e-value: 2.1E-42
score: 146.7
IPR037191VPS9 domain superfamilySUPERFAMILY109993VPS9 domaincoord: 12..167

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12420contigEcto-sp13_S_contig12420:8..5059 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12420.2009.1mRNA_Ecto-sp13_S_contig12420.2009.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12420 8..5059 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12420.2009.1 ID=prot_Ecto-sp13_S_contig12420.2009.1|Name=mRNA_Ecto-sp13_S_contig12420.2009.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=283bp
QVFDQAYGLAADPGRDSSISTRLRSLGFLTEEHLGVPPLVNAEEDGAPTW
ADAEAQLLNMSRMRCPGDMLRCIVKCTRIVAGLLTGDRAAGGALPGADDF
LPALILLVKRANPPDLHSTLEFVQSFRDPSKLLSEAGYVLTQLVSAVCFL
EEVDASVLSIAHGDFERGLIQGFQESARVGLQAHQQEVKKEEEHARLLHS
NFQGRANGPISGSATTSDSLSPPPSGDHASAGMAAAAGGGGGGEASAGSP
GPTLLPQPEPPRTIGTAEVRARRQAAAAAAAGA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003123VPS9
IPR037191VPS9_dom_sf