prot_Ecto-sp13_S_contig8629.20068.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8629.20068.1
Unique Nameprot_Ecto-sp13_S_contig8629.20068.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length177
Homology
BLAST of mRNA_Ecto-sp13_S_contig8629.20068.1 vs. uniprot
Match: A0A6H5KSL6_9PHAE (V-SNARE domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KSL6_9PHAE)

HSP 1 Score: 300 bits (768), Expect = 3.260e-101
Identity = 170/178 (95.51%), Postives = 171/178 (96.07%), Query Frame = 0
Query:    1 MEIEVRSMKGNERRQCQSRANQCRADLKDLRRSIDQAGQRAQAEELMRRSGGGAIGGGPRNFSEGGGDLGGLGPDLAQQSLAR---SRLSLQDSRRVLEETEGIGRGVMGDLESQRESLLRSRASVRDTGAAAGQARRLLGSISRRELRHRLCLYAVIALLSAAIVFVLYLKIRRRSL 175
            MEIE RSMKGNERRQCQSRANQCRADLK LRRSIDQAGQRAQAEELMRRSGGGAIGG PR+FSEGGGDL GLGPDLAQQSLAR   SRLSLQDSRRVLEETEGIGRGVMGDLESQRESLLRSRASVRDTGAAAGQARRLLGSISRRELRHRLCLYAVIALLSAAIVFVLYLKIRRRSL
Sbjct:   66 MEIEARSMKGNERRQCQSRANQCRADLKALRRSIDQAGQRAQAEELMRRSGGGAIGGEPRSFSEGGGDLRGLGPDLAQQSLARRVLSRLSLQDSRRVLEETEGIGRGVMGDLESQRESLLRSRASVRDTGAAAGQARRLLGSISRRELRHRLCLYAVIALLSAAIVFVLYLKIRRRSL 243          
BLAST of mRNA_Ecto-sp13_S_contig8629.20068.1 vs. uniprot
Match: A0A835ZAL4_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAL4_9STRA)

HSP 1 Score: 122 bits (307), Expect = 1.300e-31
Identity = 81/172 (47.09%), Postives = 104/172 (60.47%), Query Frame = 0
Query:    1 MEIEVRSMKGNERRQCQSRANQCRADLKDLRRSIDQAGQRAQAEELMRRSGGGAIGGGPRNFSEGGGDLGGLGPDLAQQSLARSRLSLQDSRRVLEETEGIGRGVMGDLESQRESLLRSRASVRDTGAAAGQARRLLGSISRRELRHRLCLYAVIALLSAAIVFVLYLKIRR 172
            MEIEVRSM G +R++C ++A Q R+DL  LRR+ DQA  RA  E                           LG D   ++LAR+ +SL DSRRVL ETE +G  V+ DLE QR+SLLR+R + R+      +AR +L +I+RR+ RHRL LYA+IA L  AI FVLYLK RR
Sbjct:   84 MEIEVRSMTGADRKKCGAKAAQYRSDLLALRRAFDQARARAARE---------------------------LGYDGGGRALARTAISLTDSRRVLAETEDVGARVVTDLEGQRQSLLRARDNAREISYDTVEAREVLRAIARRDARHRLALYAIIAALLCAIAFVLYLKFRR 228          
BLAST of mRNA_Ecto-sp13_S_contig8629.20068.1 vs. uniprot
Match: A0A6U4L7W0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4L7W0_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 3.820e-17
Identity = 60/168 (35.71%), Postives = 91/168 (54.17%), Query Frame = 0
Query:    1 MEIEVRSMKGNERRQCQSRANQCRADLKDLRRSIDQAGQRAQAEELMRRSGGGAIGGGPRNFSEGGGDLGGLGPDLAQQSLA------RSRLSLQDSRRVLEETEGIGRGVMGDLESQRESLLRSRASVRDTGAAAGQARRLLGSISRRELRHRLCLYAVIALLSAAI 162
            ME+EVRS++G  ++ CQ +  + R DL  L+R I++A          R +GGGA   G  + +      GG+    AQ  L        S   L+ +RRV+ +TE +G  +M +LE Q+E+L+R+   VR+T     +A+R+L  +  R L H LCLY VI +L A I
Sbjct:   56 MEVEVRSLRGPVKKSCQQKLERYRNDLGSLKREIERA----------RLTGGGARQAGEVSLAP---SQGGMSAQRAQMMLETNDILDESTAQLEQTRRVIADTEQVGDNIMSNLEEQKETLVRAHDDVRETRGITREAQRVLRMMGNRALMHTLCLYVVILILLALI 210          
BLAST of mRNA_Ecto-sp13_S_contig8629.20068.1 vs. uniprot
Match: A0A6T7FTV7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A6T7FTV7_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 4.760e-16
Identity = 62/177 (35.03%), Postives = 97/177 (54.80%), Query Frame = 0
Query:    1 MEIEVRSMKGNERRQCQSRANQCRADLKDLRRSIDQAGQRAQAEELMRRSGGGAIG----GGPRNF---SEGGGDLGGLGPDLAQQSLA-RSRLSLQDSRRVLEETEGIGRGVMGDLESQRESLLRSRASVRDTGAAAGQARRLLGSISRRELRHRLCLYAVIALLSAAIVFVLYLK 169
            ME  ++S++G ER   +   ++C+ D + L+  +++A   A + EL   SGG        GG + +   + G GD G  GP  A  +   R    L++SRR++ ETE IG  VMGD+E+QR  LL +   V +T      AR+ L ++  REL+H+  L A+I LL A+I  VL+ +
Sbjct:   31 MEAAIQSLEGPERTSREQAVSRCKQDFQSLKNELNRALNNADSAELTGMSGGSXXXXVRRGGGQGYQPPTSGAGDWG--GPSSAPPTTGVRGTELLEESRRIIGETEEIGDQVMGDMENQRHQLLSAHEKVLETRGFISDARQTLSTMGWRELQHKAMLVAIIILLFASICLVLWFR 205          
BLAST of mRNA_Ecto-sp13_S_contig8629.20068.1 vs. uniprot
Match: W7U7D0_9STRA (Qb-vti1-family n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U7D0_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 1.210e-14
Identity = 52/158 (32.91%), Postives = 86/158 (54.43%), Query Frame = 0
Query:    1 MEIEVRSMKGNERRQCQSRANQCRADLKDLRRSIDQAGQRAQAEELMRRSGGGAIGGGPRNFSEGGGDLGGLGPDLAQQSLARSRLSLQDSRRVLEETEGIGRGVMGDLESQRESLLRSRASVRDTGAAAGQARRLLGSISRRELRHRLCLYAVIALL 158
            +EIEV+ M   ++R C+ +  Q R DLK +RRS + A  RA+   L++ S    + G  +N +E                L  S   L D+R+V++ETE IG G++  +E+QRE L+R+   V++T      AR+++ ++  R +RH+ CL  +I  L
Sbjct:   63 LEIEVQDMPVKDKRMCREKVLQFRNDLKAMRRSFEAAKARAERHMLLQLS---QVSGKRKNIAE---------------RLMSSTEQLHDARKVVDETEHIGEGIIYQMEAQREQLVRASEQVQETNWFTRSARQVMNNMHLRAVRHKACLILIIGFL 202          
BLAST of mRNA_Ecto-sp13_S_contig8629.20068.1 vs. uniprot
Match: A0A7S1C7L7_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C7L7_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 7.550e-13
Identity = 55/162 (33.95%), Postives = 87/162 (53.70%), Query Frame = 0
Query:    1 MEIEVRSMKGNERRQCQSRANQCRADLKDLRRSIDQAGQRAQAEELMRRSGGGAIGGGPRNFSEGGGDLGGLGPDLAQQSLARSRLSLQDSRRVLEETEGIGRGVMGDLESQRESLLRSRASVRDTGAAAGQARRLLGSISRRELRHRLCLYAVIALLSAAI 162
            ME+E RS+  +E+R+   R    RA+L   R  +++A  R   + LM      A+    R  +   G +     + A   + RS   L+++RR + ETE +G G+MG+L SQRE+LLR+   V++T     +ARR+L +I RR   ++  L+ VI  L  AI
Sbjct:   63 MELEARSVAPSEKRRLTGRIRTYRAELSAARTDLERAQTRGDRDALMAGGSRDAV---SRESASQRGRI-----EEATARMDRSTAVLEETRRTVMETEEVGVGIMGNLHSQRETLLRAHDKVKETNRLTTRARRVLNNIKRRACYNQALLWVVILFLLGAI 216          
BLAST of mRNA_Ecto-sp13_S_contig8629.20068.1 vs. uniprot
Match: A0A835WA92_CHLIN (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835WA92_CHLIN)

HSP 1 Score: 70.9 bits (172), Expect = 3.190e-12
Identity = 55/182 (30.22%), Postives = 97/182 (53.30%), Query Frame = 0
Query:    1 MEIEVRSMKGNERRQCQSRANQCRADLKDLRRSIDQAGQRAQAEELMRRSGGGAIGGGPRNFSEGGGDLGGLGPDLAQQSLA-RSRL------------SLQDSRRVLEETEGIGRGVMGDLESQRESLLRSRASVRDTGAAAGQARRLLGSISRRELRHRLCLYAVIALLSAAIVFVLYLK 169
            M+ E RS+  + ++Q Q++  + RADL  L+  + +A  R+   +                F  G  +LG LG D A  S A R R+             L+  +++L ETE +G G++ +L SQRE+++RSR ++        +AR++L S+S+R L+++L ++ +I  L AAI+ ++Y K
Sbjct:    1 MDNEARSVAPDRQKQLQNKVKEYRADLASLKEQLQKA--RSSTSD----------------FESGRAELG-LGMDYASSSSAQRDRMLSATAKLEQSDERLKQGKQLLAETEDLGAGILQNLHSQRETIVRSRDTLHGADDNITKARKILSSMSKRMLQNKLIMFGIIGTLLAAIILIIYFK 163          
BLAST of mRNA_Ecto-sp13_S_contig8629.20068.1 vs. uniprot
Match: A0A0W8DN76_PHYNI (Uncharacterized protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DN76_PHYNI)

HSP 1 Score: 69.3 bits (168), Expect = 6.830e-12
Identity = 39/95 (41.05%), Postives = 60/95 (63.16%), Query Frame = 0
Query:   73 GPDLAQQSLARSRLSLQDSRRVLEETEGIGRGVMGDLESQRESLLRSRASVRDTGAAAGQARRLLGSISRRELRHRLCLYAVIALLSAAIVFVLY 167
            G ++A    A+S   L+D+ R++ ETE +G  V+  L SQRESLL +   VR+TGA   +ARR+L  ++RR + + + LY  I +L  AI +V+Y
Sbjct:   34 GGEIAATCAAQSSKKLEDTHRIVAETEEVGIAVLDTLASQRESLLGAHEKVRETGAMTTEARRILQRMTRRIITNTIVLYTTIFVLIVAICYVIY 128          
BLAST of mRNA_Ecto-sp13_S_contig8629.20068.1 vs. uniprot
Match: A0A484E001_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E001_BRELC)

HSP 1 Score: 71.6 bits (174), Expect = 7.050e-12
Identity = 42/94 (44.68%), Postives = 58/94 (61.70%), Query Frame = 0
Query:   81 LARSRLSLQDSRRVLEETEGIGRGVMGDLESQRESLLRSRASVRDTGAAAGQARRLLGSISRRELRHRLCLYAVIALLSAAIVFVLYLKIRRRS 174
            L +S + L+D+ R++ ETE +G  V+  L SQRE LL S   VR+TGA   +ARRLL  ++RR L + + LY  I +L  AI +VLY    R S
Sbjct:  157 LTQSSMKLEDTHRIVAETEEVGIAVLDTLASQRERLLESHDKVRETGAMLTEARRLLQRMTRRILTNTIVLYTTIFILGVAICYVLYADFIRTS 250          
BLAST of mRNA_Ecto-sp13_S_contig8629.20068.1 vs. uniprot
Match: A0A024TJZ2_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TJZ2_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 1.230e-11
Identity = 43/94 (45.74%), Postives = 59/94 (62.77%), Query Frame = 0
Query:   81 LARSRLSLQDSRRVLEETEGIGRGVMGDLESQRESLLRSRASVRDTGAAAGQARRLLGSISRRELRHRLCLYAVIALLSAAIVFVLYLKIRRRS 174
            L R+   L+ S+R+++ETE IG  VM  L  QRE+LL +   V+DT   AG ARR+L  +S+R L H+L L+ VI +L  AIV V Y    +RS
Sbjct:  129 LQRASDQLEQSKRIVQETEQIGISVMDTLAQQRETLLSAHDKVKDTRETAGDARRVLQRMSQRMLTHKLTLWFVILVLIVAIVLVFYHDFIKRS 222          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8629.20068.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KSL6_9PHAE3.260e-10195.51V-SNARE domain-containing protein n=2 Tax=Ectocarp... [more]
A0A835ZAL4_9STRA1.300e-3147.09Soluble NSF attachment protein receptor n=1 Tax=Tr... [more]
A0A6U4L7W0_9STRA3.820e-1735.71Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A6T7FTV7_9STRA4.760e-1635.03Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
W7U7D0_9STRA1.210e-1432.91Qb-vti1-family n=1 Tax=Nannochloropsis gaditana Ta... [more]
A0A7S1C7L7_9STRA7.550e-1333.95Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A835WA92_CHLIN3.190e-1230.22t-SNARE coiled-coil homology domain-containing pro... [more]
A0A0W8DN76_PHYNI6.830e-1241.05Uncharacterized protein n=1 Tax=Phytophthora nicot... [more]
A0A484E001_BRELC7.050e-1244.68Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A024TJZ2_9STRA1.230e-1145.74t-SNARE coiled-coil homology domain-containing pro... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 13..47
NoneNo IPR availablePFAMPF12352V-SNARE_Ccoord: 80..143
e-value: 1.7E-14
score: 53.8
NoneNo IPR availableGENE3D1.20.5.110coord: 76..148
e-value: 3.6E-16
score: 61.1
NoneNo IPR availablePANTHERPTHR21230VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATEDcoord: 1..168
NoneNo IPR availablePANTHERPTHR21230:SF26VESICLE TRANSPORT THROUGH INTERACTION WITH T-SNARES HOMOLOG 1Bcoord: 1..168
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 171..176
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..148
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 149..170
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 82..140
NoneNo IPR availableTMHMMTMhelixcoord: 149..168
IPR038407Vesicle transport v-SNARE, N-terminal domain superfamilyGENE3D1.20.58.400coord: 1..42
e-value: 4.7E-5
score: 25.7
IPR007705Vesicle transport v-SNARE, N-terminalPFAMPF05008V-SNAREcoord: 1..34
e-value: 3.6E-5
score: 24.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8629contigEcto-sp13_S_contig8629:3268..5838 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8629.20068.1mRNA_Ecto-sp13_S_contig8629.20068.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8629 3255..5847 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8629.20068.1 ID=prot_Ecto-sp13_S_contig8629.20068.1|Name=mRNA_Ecto-sp13_S_contig8629.20068.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=177bp
MEIEVRSMKGNERRQCQSRANQCRADLKDLRRSIDQAGQRAQAEELMRRS
GGGAIGGGPRNFSEGGGDLGGLGPDLAQQSLARSRLSLQDSRRVLEETEG
IGRGVMGDLESQRESLLRSRASVRDTGAAAGQARRLLGSISRRELRHRLC
LYAVIALLSAAIVFVLYLKIRRRSLV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038407v-SNARE_N_sf
IPR007705Vesicle_trsprt_v-SNARE_N