mRNA_Ecto-sp13_S_contig86289.20067.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig86289.20067.1 vs. uniprot
Match: A0A6H5JNH2_9PHAE (Sulf_transp domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JNH2_9PHAE) HSP 1 Score: 96.3 bits (238), Expect = 2.510e-22 Identity = 49/54 (90.74%), Postives = 51/54 (94.44%), Query Frame = 1
Query: 4 AGLDQAGAPALSSVVYAVAGFLVGLGTRLGSGCTSGHGLCGLPRLSRRSIVATL 165
AGLDQ GAPALS + +AVAGFLVGLGTRLGSGCTSGHGLCGLPRLSRRSIVATL
Sbjct: 71 AGLDQTGAPALSLLRFAVAGFLVGLGTRLGSGCTSGHGLCGLPRLSRRSIVATL 124
BLAST of mRNA_Ecto-sp13_S_contig86289.20067.1 vs. uniprot
Match: A0A1A7BJR9_9SPHN (Putative transporter component n=1 Tax=Erythrobacter dokdonensis DSW-74 TaxID=1300349 RepID=A0A1A7BJR9_9SPHN) HSP 1 Score: 73.6 bits (179), Expect = 3.390e-15 Identity = 38/55 (69.09%), Postives = 46/55 (83.64%), Query Frame = 1
Query: 1 VAGLDQAGAPALSS-VVYAVAGFLVGLGTRLGSGCTSGHGLCGLPRLSRRSIVAT 162
VAGL A PA +S V+ AVAG +VG+GTRLGSGCTSGHG+CG+ RLS+RS+VAT
Sbjct: 72 VAGLSGAATPAFASPVMLAVAGLIVGVGTRLGSGCTSGHGVCGMSRLSQRSLVAT 126
BLAST of mRNA_Ecto-sp13_S_contig86289.20067.1 vs. uniprot
Match: A0A1V3H6K3_9GAMM (Sulf_transp domain-containing protein n=2 Tax=Salinivibrio TaxID=51366 RepID=A0A1V3H6K3_9GAMM) HSP 1 Score: 70.5 bits (171), Expect = 4.540e-14 Identity = 33/47 (70.21%), Postives = 42/47 (89.36%), Query Frame = 1
Query: 25 APALSSVVYAVAGFLVGLGTRLGSGCTSGHGLCGLPRLSRRSIVATL 165
APAL+ +V +AG LVG+GT+LG+GCTSGHG+CG+ RLS+RSIVATL
Sbjct: 79 APALTPMVAVLAGLLVGIGTKLGNGCTSGHGICGMGRLSKRSIVATL 125
BLAST of mRNA_Ecto-sp13_S_contig86289.20067.1 vs. uniprot
Match: UPI001667CCE2 (YeeE/YedE family protein n=1 Tax=Silvimonas amylolytica TaxID=449663 RepID=UPI001667CCE2) HSP 1 Score: 70.1 bits (170), Expect = 6.860e-14 Identity = 34/43 (79.07%), Postives = 38/43 (88.37%), Query Frame = 1
Query: 37 SSVVYAVAGFLVGLGTRLGSGCTSGHGLCGLPRLSRRSIVATL 165
SSV+ +AG LVGLGTRLGSGCTSGHG+CGL RLS RS+VATL
Sbjct: 84 SSVLLVIAGLLVGLGTRLGSGCTSGHGVCGLSRLSARSLVATL 126
BLAST of mRNA_Ecto-sp13_S_contig86289.20067.1 vs. uniprot
Match: A0A2Z2P5M5_9SPHN (Sulf_transp domain-containing protein n=1 Tax=Porphyrobacter sp. CACIAM 03H1 TaxID=2003315 RepID=A0A2Z2P5M5_9SPHN) HSP 1 Score: 70.1 bits (170), Expect = 7.660e-14 Identity = 36/55 (65.45%), Postives = 44/55 (80.00%), Query Frame = 1
Query: 1 VAGLDQAGAPALSS-VVYAVAGFLVGLGTRLGSGCTSGHGLCGLPRLSRRSIVAT 162
V L A APA +S V A+AG +VG+GTRLGSGCTSGHG+CG+ RLS+RS+VAT
Sbjct: 72 VTALTAAPAPAFASPVTLAIAGLIVGIGTRLGSGCTSGHGVCGMSRLSQRSLVAT 126
BLAST of mRNA_Ecto-sp13_S_contig86289.20067.1 vs. uniprot
Match: A0A3N3DVK3_9VIBR (YeeE/YedE family protein n=2 Tax=Vibrio ponticus TaxID=265668 RepID=A0A3N3DVK3_9VIBR) HSP 1 Score: 69.3 bits (168), Expect = 1.230e-13 Identity = 32/44 (72.73%), Postives = 40/44 (90.91%), Query Frame = 1
Query: 34 LSSVVYAVAGFLVGLGTRLGSGCTSGHGLCGLPRLSRRSIVATL 165
+S V +AVAG LVG+GTRLG+GCTSGHG+CG+ RLS+RSIVAT+
Sbjct: 79 ISLVAFAVAGLLVGVGTRLGNGCTSGHGICGIGRLSKRSIVATV 122
BLAST of mRNA_Ecto-sp13_S_contig86289.20067.1 vs. uniprot
Match: A0A553L8M6_9ALTE (YeeE/YedE family protein n=1 Tax=Aliiglaciecola sp. M165 TaxID=2593649 RepID=A0A553L8M6_9ALTE) HSP 1 Score: 68.9 bits (167), Expect = 1.660e-13 Identity = 34/51 (66.67%), Postives = 42/51 (82.35%), Query Frame = 1
Query: 13 DQAGAPALSSVVYAVAGFLVGLGTRLGSGCTSGHGLCGLPRLSRRSIVATL 165
DQ AP ++ A+AG LVG+GTR+GSGCTSGHG+CG+ RLS+RSIVATL
Sbjct: 73 DQISAPIIT---LAIAGLLVGIGTRMGSGCTSGHGICGIGRLSKRSIVATL 120
BLAST of mRNA_Ecto-sp13_S_contig86289.20067.1 vs. uniprot
Match: A0A419A931_9RHOB (YeeE/YedE family protein n=1 Tax=Paracoccus siganidrum TaxID=1276757 RepID=A0A419A931_9RHOB) HSP 1 Score: 68.9 bits (167), Expect = 1.810e-13 Identity = 35/53 (66.04%), Postives = 39/53 (73.58%), Query Frame = 1
Query: 7 GLDQAGAPALSSVVYAVAGFLVGLGTRLGSGCTSGHGLCGLPRLSRRSIVATL 165
GL +A AP V +AG LVG GTRLGSGCTSGHG+CG+ RLS R IVATL
Sbjct: 69 GLGRAAAPVAGPWVLVLAGLLVGFGTRLGSGCTSGHGVCGISRLSVRGIVATL 121
BLAST of mRNA_Ecto-sp13_S_contig86289.20067.1 vs. uniprot
Match: A0A258BP21_9SPHN (Sulf_transp domain-containing protein n=1 Tax=Sphingobium sp. 32-64-5 TaxID=1970430 RepID=A0A258BP21_9SPHN) HSP 1 Score: 68.6 bits (166), Expect = 2.400e-13 Identity = 32/44 (72.73%), Postives = 39/44 (88.64%), Query Frame = 1
Query: 34 LSSVVYAVAGFLVGLGTRLGSGCTSGHGLCGLPRLSRRSIVATL 165
+S V A+AG +VG+GTRLGSGCTSGHG+CG+ RLS+RSIVATL
Sbjct: 75 MSLPVLAIAGLIVGIGTRLGSGCTSGHGVCGMSRLSKRSIVATL 118
BLAST of mRNA_Ecto-sp13_S_contig86289.20067.1 vs. uniprot
Match: A0A1T0CRV9_9GAMM (Uncharacterized protein n=1 Tax=Moraxella pluranimalium TaxID=470453 RepID=A0A1T0CRV9_9GAMM) HSP 1 Score: 68.6 bits (166), Expect = 2.400e-13 Identity = 33/43 (76.74%), Postives = 38/43 (88.37%), Query Frame = 1
Query: 37 SSVVYAVAGFLVGLGTRLGSGCTSGHGLCGLPRLSRRSIVATL 165
S+ + +AG LVGLGTRLGSGCTSGHG+CG+ RLSRRSIVATL
Sbjct: 76 STGLLMIAGMLVGLGTRLGSGCTSGHGICGISRLSRRSIVATL 118 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig86289.20067.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig86289.20067.1 >prot_Ecto-sp13_S_contig86289.20067.1 ID=prot_Ecto-sp13_S_contig86289.20067.1|Name=mRNA_Ecto-sp13_S_contig86289.20067.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=55bp VAGLDQAGAPALSSVVYAVAGFLVGLGTRLGSGCTSGHGLCGLPRLSRRSback to top mRNA from alignment at Ecto-sp13_S_contig86289:2..166- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig86289.20067.1 ID=mRNA_Ecto-sp13_S_contig86289.20067.1|Name=mRNA_Ecto-sp13_S_contig86289.20067.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=165bp|location=Sequence derived from alignment at Ecto-sp13_S_contig86289:2..166- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig86289:2..166- >mRNA_Ecto-sp13_S_contig86289.20067.1 ID=mRNA_Ecto-sp13_S_contig86289.20067.1|Name=mRNA_Ecto-sp13_S_contig86289.20067.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=165bp|location=Sequence derived from alignment at Ecto-sp13_S_contig86289:2..166- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |