mRNA_Ecto-sp13_S_contig8617.20051.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8617.20051.1 vs. uniprot
Match: D7G4X3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4X3_ECTSI) HSP 1 Score: 375 bits (963), Expect = 3.310e-116 Identity = 198/258 (76.74%), Postives = 224/258 (86.82%), Query Frame = 1
Query: 1 VGSLEAPEVDLVAKDYNLKHNPSEKVVIYGFVTEQTSPSVLQWTQTEGDLNLEDQEWSTFFTTAQSGTNLAIRSGTLSGGSTYTFRLSATDMASQATGFAELSLTTNAAPSGGHIEASPRAGTAAIDTFVLESLDWTDEVEDLPLMFSFSYNNQEESGQQRSLSVLATESPEWQGPLPLGPSSDNYTMLIIGHVFDSFGAASVSTSDATGMPVTVRITGWTASNDSSTIIAAYQAAHDETADSPGEATSTVRAYASLL 774
V S EAPEV L++KD +LK +P++KVVIYG V+EQ+S L WTQ EGDL+LE++EWST F TAQ+G NL I G L+GGSTYTFRLSATD+ASQATGFA+++LT NA P+GGH+ ASPRAG AAIDTFVLESLDWTDEV+DLPL+FSFSYNN+EESGQQRSLSV A E PEWQG LPLGPSSDNYTMLI GHV DSFGA +VSTSDA G PVTVR+TGWTASN +TII AYQAAHDETAD+PGEATSTVRAYASLL
Sbjct: 730 VVSFEAPEVVLISKDDSLKQDPTKKVVIYGSVSEQSSSYDLLWTQAEGDLDLEEREWSTVFATAQTGANLVIPRGLLTGGSTYTFRLSATDVASQATGFADMTLTINAPPTGGHVVASPRAGVAAIDTFVLESLDWTDEVDDLPLLFSFSYNNEEESGQQRSLSVFAVELPEWQGSLPLGPSSDNYTMLIKGHVSDSFGATAVSTSDAIGSPVTVRVTGWTASNGDATIIDAYQAAHDETADTPGEATSTVRAYASLL 987
BLAST of mRNA_Ecto-sp13_S_contig8617.20051.1 vs. uniprot
Match: D7FLQ1_ECTSI (REJ domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLQ1_ECTSI) HSP 1 Score: 213 bits (541), Expect = 1.400e-61 Identity = 109/154 (70.78%), Postives = 133/154 (86.36%), Query Frame = 1
Query: 1 VGSLEAPEVDLVAKDYNLKHNPSEKVVIYGFVTEQTSPSVLQWTQTEGDLNLEDQEWSTFFTTAQSGTNLAIRSGTLSGGSTYTFRLSATDMASQATGFAELSLTTNAAPSGGHIEASPRAGTAAIDTFVLESLDWTDEVEDLPLMFSFSYNNQ 462
V S EAPEV L++KD +LK +P++KVVIYG V+EQ+S L WTQ EGDL+LE++EWST F TAQ+G NL I G L+GGSTYTFRLSATD+ASQATGFA+++LT NA P+GGH++ASPRAG AA+DTF+LESLDWTDEV+DLPLMFSFSYNN+
Sbjct: 438 VVSFEAPEVVLISKDDSLKQDPTKKVVIYGSVSEQSSSYDLLWTQAEGDLDLEEREWSTVFATAQTGANLVIPRGLLTGGSTYTFRLSATDVASQATGFADMTLTINAPPTGGHVDASPRAGVAAVDTFLLESLDWTDEVDDLPLMFSFSYNNE 591
BLAST of mRNA_Ecto-sp13_S_contig8617.20051.1 vs. uniprot
Match: A0A6H5JM67_9PHAE (GPS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM67_9PHAE) HSP 1 Score: 179 bits (453), Expect = 4.660e-48 Identity = 108/215 (50.23%), Postives = 134/215 (62.33%), Query Frame = 1
Query: 205 NLAIRSGTLSGGSTYTFRLSATDMASQAT-----------------GFAELSLTTNAAPSGGHIEASPRAGTAAIDTFVLESLDWTDEVEDLPLMFSFSYNN--------QEESGQQRSLSVLATESPEWQGPLPLGPSSDNYTMLIIGHVFDSFGAASVSTSDATGMPVTVRITGWTASNDSSTIIAAYQAAHDETADSPGEATSTVRAYASLL 774
NL IR L+GGS+Y FRLSA D AS T GFAE+ NA PSGG+++A+PRAG AAID F LE+L W D++EDLPL SF Y Q+E+G QRSLS+ ES EW GPLP+G ++DNYTM IIGH+ DS+GA S D +G + VR+TGW AS+ +++ Y AA T D PGE TS VRA+ASLL
Sbjct: 15 NLVIRPYVLTGGSSYMFRLSAVDTASGETAFESHRYCCACGHIHLSGFAEIHFDVNAPPSGGYVQATPRAGVAAIDMFSLEALLWEDDIEDLPLKVSFFYVAGQHQFDPLQDETGTQRSLSLYEVESVEWNGPLPVGSAADNYTMTIIGHISDSYGATETSFFDESGETLLVRVTGWAASSSGLSLMNEYTAAASVTEDIPGETTSIVRAFASLL 229
BLAST of mRNA_Ecto-sp13_S_contig8617.20051.1 vs. uniprot
Match: D7G3A1_ECTSI (GPS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3A1_ECTSI) HSP 1 Score: 176 bits (446), Expect = 1.280e-46 Identity = 120/258 (46.51%), Postives = 152/258 (58.91%), Query Frame = 1
Query: 4 GSLEAPEVDLVAKDYNLKHNPSEKVVIYGFVTEQTSPSVLQWTQTEGDLNLEDQEWSTFFTTAQSGTNLAIRSGTLSGGSTYTFRLSATDMASQATGFAELSLTTNAAPSGGHIEASPRAGTAAIDTFVLESLDWTDEVEDLPLMFSFSY-NNQEESGQQRSLSVLATESPEWQGPLPLGPSSDNYTMLIIGHVFDSFGAASVSTSDATGMPVTVRITGWTASNDSSTIIAAYQAAHDETADSPGEATSTVRAYASLL 774
GSLEA V N+ +E V+YG S S + GDL+L +WS FFT+ Q+G L R L+GGS+YTFRLSA D AS TGFAE+ NA PSGG++EA+PRAG AAID F LE+L W D++ DLPL SF Y Q+E+G+QRSLS+ ES EW GPLP+G ++DNYTM II V + S+S+ + G + ++ Y AA T D PGEATS VRA+ASLL
Sbjct: 266 GSLEAGLV--YEFSLNISKGTAESDVVYGVFR---SDSATVQVRVNGDLDLATADWSDFFTSTQTGAILVARPHVLTGGSSYTFRLSAVDTASGETGFAEMYFDVNAPPSGGYVEATPRAGVAAIDMFSLEALLWEDDIGDLPLKVSFFYVAGQDETGRQRSLSLYEVESVEWNGPLPVGSAADNYTMTIIVSV-----RKTQSSSECHDSCFLTQTPGQSLMDE-------YTAAASVTEDVPGEATSIVRAFASLL 506
BLAST of mRNA_Ecto-sp13_S_contig8617.20051.1 vs. uniprot
Match: D7G398_ECTSI (GPS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G398_ECTSI) HSP 1 Score: 164 bits (414), Expect = 2.800e-42 Identity = 117/284 (41.20%), Postives = 146/284 (51.41%), Query Frame = 1
Query: 4 GSLEAPEVDLVAKDYNLKHNPSEKVVIYGFVTEQTSPSVLQWTQTEGDLNLEDQEWSTFFTTAQSGTNLAIRSGTLSGGSTYTFRLSATDMASQATG--------------------------FAELSLTTNAAPSGGHIEASPRAGTAAIDTFVLESLDWTDEVEDLPLMFSFSY-NNQEESGQQRSLSVLATESPEWQGPLPLGPSSDNYTMLIIGHVFDSFGAASVSTSDATGMPVTVRITGWTASNDSSTIIAAYQAAHDETADSPGEATSTVRAYASLL 774
GSLEA V N+ +E V+YG S S Q GDL+L +WS FT+ Q+G L +R L+GGS+YTFRLSA D AS TG FAE+ NA PSGG++EA+PRAG AAID F LE+L W D++EDLPL SF Y Q+E+G +RSLS+ ES EW GPLP+G ++DNYTM II W AS+ +++ Y A T D PGE TS VRA+ASLL
Sbjct: 706 GSLEAGLV--YEFSLNISKGTAESDVVYGVFR---SDSAAVQVQVNGDLDLATADWSDLFTSTQTGAILVVRPFVLTGGSSYTFRLSAVDTASGETGTQSRRCTGLSRRSTVRSSAVHRNAGGFAEIHFDVNAPPSGGYVEATPRAGVAAIDMFSLEALLWEDDIEDLPLKVSFFYVAGQDETGTRRSLSLYEVESVEWNGPLPVGSAADNYTMTIIA---------------------------WAASSSGLSLMDEYAAVASVTEDIPGETTSIVRAFASLL 957
BLAST of mRNA_Ecto-sp13_S_contig8617.20051.1 vs. uniprot
Match: A0A6H5JLT2_9PHAE (GPS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLT2_9PHAE) HSP 1 Score: 129 bits (325), Expect = 1.930e-30 Identity = 74/110 (67.27%), Postives = 81/110 (73.64%), Query Frame = 1
Query: 445 FSYNNQEESGQQRSLSVLATESPEWQGPLPLGPSSDNYTMLIIGHVFDSFGAASVSTSDATGMPVTVRITGWTASNDSSTIIAAYQAAHDETADSPGEATSTVRAYASLL 774
F + QE SGQQRSLSV ATESPEWQG HV DSFGA +VSTSDA G PVTVR+TGWTASN STI+ AYQAAH+ETAD+PG+ATSTVRAYASLL
Sbjct: 10 FVSSPQEGSGQQRSLSVFATESPEWQG-----------------HVSDSFGATTVSTSDAIGSPVTVRVTGWTASNGESTIVDAYQAAHEETADTPGDATSTVRAYASLL 102
BLAST of mRNA_Ecto-sp13_S_contig8617.20051.1 vs. uniprot
Match: D7G3A0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3A0_ECTSI) HSP 1 Score: 118 bits (296), Expect = 1.470e-26 Identity = 72/150 (48.00%), Postives = 91/150 (60.67%), Query Frame = 1
Query: 4 GSLEAPEVDLVAKDYNLKHNPSEKVVIYGFVTEQTSPSVLQWTQTEGDLNLEDQEWSTFFTTAQSGTNLAIRSGTLSGGSTYTFRLSATDMASQATGFAELSLTTNAAPSGGHIEASPRAGTAAIDTFVLESLDWTDEVEDLPLMFSFSY 453
GSLEA V N+ +E +YG + +Q GDL+L +W FFT ++G NL +R L+GGS+YTFRLSA D AS TGFAE+ NA PSGG++EA+PRAG AAID F LE+L W D++EDLPL SF Y
Sbjct: 325 GSLEAGLV--YEFSLNISKGTAESDAVYGVFRSDVATVQVQ---VNGDLDLATADWGDFFTGTKTGANLVVRPHVLTGGSSYTFRLSAVDPASGETGFAEIYFDVNAPPSGGYVEATPRAGVAAIDMFSLEALLWEDDLEDLPLKVSFFY 469
BLAST of mRNA_Ecto-sp13_S_contig8617.20051.1 vs. uniprot
Match: D7FJB6_ECTSI (GPS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJB6_ECTSI) HSP 1 Score: 113 bits (282), Expect = 1.100e-24 Identity = 80/217 (36.87%), Postives = 116/217 (53.46%), Query Frame = 1
Query: 55 KHNPSEKVVIYGFVT----EQTSPSV-----LQWTQTEGDLNLEDQEWSTFFTTAQSGTNLAIRSGTLSGGSTYTFRLSATDMASQATGFAELSLTTNAAPSGGHIEASPRAGTAAIDTFVLESLDWTDEVEDLPLMFSFSY-NNQEESGQQRSLSVLATE-------SPEWQGPLPLGPSSDNYTMLIIGHVFDSFGAASVSTSDATGMPVTVRIT 654
K+NPSEKVV+ G + E S S L+W G+++L + W F+T S L +R G L G TYTF LSATD + Q G+AE S TNA P+GGH+E++ + TA +D L+S+ WTD+V+DLP SF + + ++ S SVL SP + +P G + D Y + I+ V DS G+ + + A G P+ + T
Sbjct: 439 KYNPSEKVVLQGCASPSAEELCSSSTSSLFKLEWKPESGNVDLSNG-WDDVFSTTTSDRVLVVRKGVLGAGRTYTFSLSATDTSGQE-GYAEFSFETNAPPAGGHVESNTSSATAGVDGVRLQSVGWTDDVDDLPFTHSFGFVHGYQQVATIASESVLVNRLSSSWSASPTLRTKIPSGLADDGYNVTILVSVSDSLGSTASTNLGADGTPMIIAST 653
BLAST of mRNA_Ecto-sp13_S_contig8617.20051.1 vs. uniprot
Match: D7FJB7_ECTSI (GPS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJB7_ECTSI) HSP 1 Score: 107 bits (266), Expect = 1.450e-22 Identity = 76/215 (35.35%), Postives = 110/215 (51.16%), Query Frame = 1
Query: 55 KHNPSEKVVIY--------GFVTEQTSPSV-LQWTQTEGDLNLEDQEWSTFFTTAQSGTNLAIRSGTLSGGSTYTFRLSATDMASQATGFAELSLTTNAAPSGGHIEASPRAGTAAIDTFVLESLDWTDEVEDLPLMFSFSYNN---------QEESGQQRSLSVLATESPEWQGPLPLGPSSDNYTMLIIGHVFDSFGAASVSTSDATGMPVTV 645
K+NPSEK+V+Y G TS S L W Q G+L+L + W+ F+T + L R G L G Y+F LSATD AS G+AE S TNA PSGGH+++ + TA ++ VL++L WTD+++DLPL +SF Y ES LS + S +P G S + + + I+ D+ G+ + + G P+ V
Sbjct: 268 KYNPSEKIVLYACASSSPEGPCDSSTSSSFGLTWRQENGNLDLRNG-WTKAFSTPVNARTLVTRKGALGAGQVYSFSLSATD-ASGLVGYAEFSFETNAPPSGGHLKSDRLSATAGVNPVVLQTLGWTDDIDDLPLTYSFGYIQGYHEVIAIASSESALVNRLSSSPSVSTTLTTNVPAGLSRNEFNLTIVVSASDTLGSTAATNLGEDGAPMVV 480
BLAST of mRNA_Ecto-sp13_S_contig8617.20051.1 vs. uniprot
Match: A0A6H5JCS7_9PHAE (REJ domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCS7_9PHAE) HSP 1 Score: 106 bits (264), Expect = 2.680e-22 Identity = 84/246 (34.15%), Postives = 119/246 (48.37%), Query Frame = 1
Query: 19 PEVDLVAKDYNLKHNPSEKVVIY--------GFVTEQTSPSV-LQWTQT-------------------EGDLNLEDQEWSTFFTTAQSGTNLAIRSGTLSGGSTYTFRLSATDMASQATGFAELSLTTNAAPSGGHIEASPRAGTAAIDTFVLESLDWTDEVEDLPLMFSFSYNN--------QEESGQQRSLSVLATESPEWQGPLPLGPSSDNYTMLIIGHVFDSFGAASVSTSDATGMPVTVR 648
P V + K K+NPSEK+V+Y G TS S L W Q G+L+L + WS F+T + L IR G L G Y+F LSATD AS G+AE S TNA PSGGH+++ + TA ++ VL++L WTD+++DLPL +SF Y ES LS + S +P G S +++ + I+ V D+ G+ + +T G P+ VR
Sbjct: 283 PSVSISPKTILRKYNPSEKIVLYACASSSPEGPCDSSTSSSFELMWRQPPPAPTSYLHIPRRCTFHQENGNLDLRNG-WSEAFSTPVNARTLIIRKGALGAGQVYSFSLSATD-ASGLVGYAEFSFETNAPPSGGHLKSDRLSATAGVNPVVLQTLGWTDDIDDLPLTYSFGYIQGYHEVITIASESTFVNKLSSSPSVSTTLSTNVPAGISRNDFNLTIVVSVSDTLGSMAATTLGEDGAPMIVR 526 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8617.20051.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8617.20051.1 >prot_Ecto-sp13_S_contig8617.20051.1 ID=prot_Ecto-sp13_S_contig8617.20051.1|Name=mRNA_Ecto-sp13_S_contig8617.20051.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=258bp VGSLEAPEVDLVAKDYNLKHNPSEKVVIYGFVTEQTSPSVLQWTQTEGDLback to top mRNA from alignment at Ecto-sp13_S_contig8617:3121..6241+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8617.20051.1 ID=mRNA_Ecto-sp13_S_contig8617.20051.1|Name=mRNA_Ecto-sp13_S_contig8617.20051.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3121bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8617:3121..6241+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8617:3121..6241+ >mRNA_Ecto-sp13_S_contig8617.20051.1 ID=mRNA_Ecto-sp13_S_contig8617.20051.1|Name=mRNA_Ecto-sp13_S_contig8617.20051.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=774bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8617:3121..6241+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |