mRNA_Ecto-sp13_S_contig86107.20045.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig86107.20045.1 vs. uniprot
Match: D7FXN8_ECTSI (MYND-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXN8_ECTSI) HSP 1 Score: 104 bits (260), Expect = 5.800e-25 Identity = 46/49 (93.88%), Postives = 47/49 (95.92%), Query Frame = 1
Query: 1 RMTVASGSAGCSNCGKDGSLRPCSRCRQVRYCSRDCQRQHWKDHKRDCG 147
RMTVASGSAGCSNCGK GSLRPCSRC QVRYCSRDCQRQHW+DHKRDCG
Sbjct: 1337 RMTVASGSAGCSNCGKVGSLRPCSRCHQVRYCSRDCQRQHWRDHKRDCG 1385
BLAST of mRNA_Ecto-sp13_S_contig86107.20045.1 vs. uniprot
Match: A0A6H5JFV6_9PHAE (MYND-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFV6_9PHAE) HSP 1 Score: 62.8 bits (151), Expect = 3.340e-10 Identity = 27/46 (58.70%), Postives = 30/46 (65.22%), Query Frame = 1
Query: 7 TVASGSAGCSNCGKDGSLRPCSRCRQVRYCSRDCQRQHWKDHKRDC 144
T A GS C+ CGK G CSRCR V YCS++CQRQ WK HK C
Sbjct: 1093 TAADGSRKCAKCGKSGKPLQCSRCRNVSYCSKECQRQDWKSHKPSC 1138
BLAST of mRNA_Ecto-sp13_S_contig86107.20045.1 vs. uniprot
Match: A0A8H3H5H6_9AGAM (Hypothetical protein n=1 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A8H3H5H6_9AGAM) HSP 1 Score: 60.5 bits (145), Expect = 2.180e-9 Identity = 25/40 (62.50%), Postives = 30/40 (75.00%), Query Frame = 1
Query: 28 GCSNCGKDGS-LRPCSRCRQVRYCSRDCQRQHWKDHKRDC 144
GC C K G+ L C RC++ RYCS +CQR+HWKDHKRDC
Sbjct: 1117 GCWACAKSGAPLSACGRCQRARYCSTECQREHWKDHKRDC 1156
BLAST of mRNA_Ecto-sp13_S_contig86107.20045.1 vs. uniprot
Match: A0A8H5C6D7_9AGAR (MYND-type domain-containing protein n=1 Tax=Tulosesus angulatus TaxID=980116 RepID=A0A8H5C6D7_9AGAR) HSP 1 Score: 59.7 bits (143), Expect = 2.540e-9 Identity = 24/40 (60.00%), Postives = 31/40 (77.50%), Query Frame = 1
Query: 28 GCSNCGKDGS-LRPCSRCRQVRYCSRDCQRQHWKDHKRDC 144
GC+ CG++GS LR C RC +V+YC DCQ+ HWK HK+DC
Sbjct: 197 GCAGCGREGSGLRRCGRCGKVKYCGADCQKGHWKIHKKDC 236
BLAST of mRNA_Ecto-sp13_S_contig86107.20045.1 vs. uniprot
Match: D8LNQ8_ECTSI (MYND-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNQ8_ECTSI) HSP 1 Score: 59.3 bits (142), Expect = 5.580e-9 Identity = 27/51 (52.94%), Postives = 33/51 (64.71%), Query Frame = 1
Query: 1 RMTVAS--GSAGCSNCGKDGSLRPCSRCRQVRYCSRDCQRQHWKDHKRDCG 147
+M AS G C+ CG G C+RCR+V YCS++CQRQHWK HK CG
Sbjct: 1322 KMAAASVAGPPKCAKCGIGGKSLQCTRCRKVSYCSKECQRQHWKIHKAACG 1372
BLAST of mRNA_Ecto-sp13_S_contig86107.20045.1 vs. uniprot
Match: A0A2P6VG49_9CHLO (Ankyrin n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VG49_9CHLO) HSP 1 Score: 58.5 bits (140), Expect = 6.640e-9 Identity = 24/41 (58.54%), Postives = 28/41 (68.29%), Query Frame = 1
Query: 25 AGCSNCGKDGSLRPCSRCRQVRYCSRDCQRQHWKDHKRDCG 147
A C NCGK G+ R C+ C YCSR+CQR HWK+HK CG
Sbjct: 36 AACFNCGKAGTTRRCTGCLAALYCSRNCQRAHWKEHKGRCG 76
BLAST of mRNA_Ecto-sp13_S_contig86107.20045.1 vs. uniprot
Match: UPI0020080B4F (uncharacterized protein n=1 Tax=Epithele typhae TaxID=378194 RepID=UPI0020080B4F) HSP 1 Score: 58.9 bits (141), Expect = 7.590e-9 Identity = 26/39 (66.67%), Postives = 31/39 (79.49%), Query Frame = 1
Query: 28 GCSNCGKDGSLRPCSRCRQVRYCSRDCQRQHWKDHKRDC 144
GC+ CGK+G+ R CSRC+ VRYCS DCQR WK+HK DC
Sbjct: 266 GCAVCGKEGASR-CSRCQIVRYCSSDCQRADWKNHKPDC 303
BLAST of mRNA_Ecto-sp13_S_contig86107.20045.1 vs. uniprot
Match: A0A2P6VFU6_9CHLO (Ankyrin n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VFU6_9CHLO) HSP 1 Score: 58.5 bits (140), Expect = 1.040e-8 Identity = 24/41 (58.54%), Postives = 28/41 (68.29%), Query Frame = 1
Query: 25 AGCSNCGKDGSLRPCSRCRQVRYCSRDCQRQHWKDHKRDCG 147
A C NCGK G+ R C+ C YCSR+CQR HWK+HK CG
Sbjct: 751 AACFNCGKAGATRRCTGCLAALYCSRNCQRAHWKEHKGRCG 791
BLAST of mRNA_Ecto-sp13_S_contig86107.20045.1 vs. uniprot
Match: A0A7S2UNG7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UNG7_9STRA) HSP 1 Score: 58.2 bits (139), Expect = 1.390e-8 Identity = 26/39 (66.67%), Postives = 29/39 (74.36%), Query Frame = 1
Query: 31 CSNCGKDGSL-RPCSRCRQVRYCSRDCQRQHWKDHKRDC 144
C+ CG D ++ R CSRCR V YC RDCQR HWKDHKR C
Sbjct: 18 CAACGIDTTMIRGCSRCRTVGYCGRDCQRGHWKDHKRVC 56
BLAST of mRNA_Ecto-sp13_S_contig86107.20045.1 vs. uniprot
Match: A0A8K0TVR9_9AGAM (Ankyrin repeat-containing domain protein n=1 Tax=Phlebopus sp. FC_14 TaxID=2615122 RepID=A0A8K0TVR9_9AGAM) HSP 1 Score: 58.2 bits (139), Expect = 1.410e-8 Identity = 24/39 (61.54%), Postives = 28/39 (71.79%), Query Frame = 1
Query: 31 CSNCG-KDGSLRPCSRCRQVRYCSRDCQRQHWKDHKRDC 144
C NC K G L+ C+RC VRYCS++CQR HWK HK DC
Sbjct: 221 CENCKTKSGGLKQCARCHVVRYCSKECQRAHWKTHKADC 259 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig86107.20045.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig86107.20045.1 >prot_Ecto-sp13_S_contig86107.20045.1 ID=prot_Ecto-sp13_S_contig86107.20045.1|Name=mRNA_Ecto-sp13_S_contig86107.20045.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=49bp MTVASGSAGCSNCGKDGSLRPCSRCRQVRYCSRDCQRQHWKDHKRDCG*back to top mRNA from alignment at Ecto-sp13_S_contig86107:291..440- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig86107.20045.1 ID=mRNA_Ecto-sp13_S_contig86107.20045.1|Name=mRNA_Ecto-sp13_S_contig86107.20045.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=150bp|location=Sequence derived from alignment at Ecto-sp13_S_contig86107:291..440- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig86107:291..440- >mRNA_Ecto-sp13_S_contig86107.20045.1 ID=mRNA_Ecto-sp13_S_contig86107.20045.1|Name=mRNA_Ecto-sp13_S_contig86107.20045.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=147bp|location=Sequence derived from alignment at Ecto-sp13_S_contig86107:291..440- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |