mRNA_Ecto-sp13_S_contig860.20023.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig860.20023.1
Unique NamemRNA_Ecto-sp13_S_contig860.20023.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig860.20023.1 vs. uniprot
Match: D8LUC7_ECTSI (Alb3 homolog, thylakoidal inner membrane insertase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LUC7_ECTSI)

HSP 1 Score: 792 bits (2046), Expect = 1.510e-282
Identity = 415/433 (95.84%), Postives = 421/433 (97.23%), Query Frame = 1 
Query:    1 MGPPLTALVAACAMANAGTVSAFAPPGLAVSARSRFVPANSWTSRSSAPAARPSASGARGLQAMVDPGMLHGVDPAWLHQVLTGIADGDVAAAVADEAAKGGGGGFHPIELLTGVTEGAITGLHDVLASMGVPSAYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTDMMSWIKDWSDGAPKLGWHDTIAYMTIPIILVITQSISTRIMQPAKDPSQPVDESQAASQNASIVKFLPLMIGWFSLSVPSALGLYWILNNFISTATSVFIRNQIANETGDPNMKAPKITLPFMEEEPEVVTMPIPREALPDSAAVEETKGFVPTPATLDAEVEGEIVQEDGAPAPRVSTAS 1299
            MG PLTALVAACAMANAGTVSAFAPPGLAVSARSRFV ANSWTSRSSAPAARPSASGARGLQAMVDPGM+HGVDPAWLHQVLTGIADGDVAAAVA+EAA     GFHPI+LLTGVTEGAITGLHDVLASMGVPSAYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPT+MMSWIKDWSDGAPKLGWHDTIAYMTIPIILVITQSISTRIMQPAKDPSQPVDESQAASQN  IVKFLPLMIGWFSLSVPSALGLYWILNNFISTATSVFIRNQIA+ETGDPNMKAPKITLPFMEEEPEVVTMPIPREALPDSA VEETKGFVPTPATLDAEVEGEIV+EDGAPAP VS AS
Sbjct:    1 MGRPLTALVAACAMANAGTVSAFAPPGLAVSARSRFVAANSWTSRSSAPAARPSASGARGLQAMVDPGMMHGVDPAWLHQVLTGIADGDVAAAVAEEAAXXXXXGFHPIQLLTGVTEGAITGLHDVLASMGVPSAYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWIKDWSDGAPKLGWHDTIAYMTIPIILVITQSISTRIMQPAKDPSQPVDESQAASQN--IVKFLPLMIGWFSLSVPSALGLYWILNNFISTATSVFIRNQIADETGDPNMKAPKITLPFMEEEPEVVTMPIPREALPDSAVVEETKGFVPTPATLDAEVEGEIVKEDGAPAPPVSAAS 431
[Close]
BLAST of mRNA_Ecto-sp13_S_contig860.20023.1 vs. uniprot
Match: A0A835YLS0_9STRA (Alb3-like protein, thylakoidal inner membrane insertase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLS0_9STRA)

HSP 1 Score: 359 bits (921), Expect = 3.440e-113
Identity = 221/440 (50.23%), Postives = 278/440 (63.18%), Query Frame = 1 
Query:   22 LVAACAMANAGTVSAFAPPGLAVSARSRFVPANSWTSRSSAPAARPSASGARGLQAMVDPGMLHGVDPAWLHQVLTGIADGDVAAA-VADEAAKGGGGGFHPIELLTGVTEGAITGLHDVLASMGVPSAYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTDMMSWIKDWSDGAPKLGWHDTIAYMTIPIILVITQSISTRIMQPAKDPSQPVDESQAASQNASIVKFLPLMIGWFSLSVPSALGLYWILNNFISTATSVFIRNQI-----ANETGDPNMKAPKITLPFMEEEPEVVTMPIPREALPDSAA---VEETKGFVPTPATLDAEVEGEIVQEDGAPAPRVSTASAKTPK 1314
            LV    +A+A      AP G+ VS     V   +  SR S PAA    SG  GL+A+ D     G+D   LHQV +G+AD   A A  A +AA   GG F     L   TE AIT LHD L   GV  +YG +II FTLF+KG+TFPLTYQQL+STTKMQTL PKVK++Q R ANNPEAAN+A+  LY+ E VNPL+GCLP+LAQIPIFISLYR+LLNLAKENKL E FLW+PSLEGP F +PPT+ ++WIK W +G P LGWHDT+ Y++IP+ILVITQSIS +++ P K      D SQA      I+K+LPL+IGWFSL+VPS LGLYWI+NN +STA SV IR Q+     A  T     +A          + EVV      +++ D A    +EE KGF     +   +V+GEI+  + +  P+ S+   K  K
Sbjct:    7 LVGLACLASAAAFVINAPAGIVVSNGFGRVARRTVQSRGS-PAAT---SGVGGLRALAD----GGIDFTVLHQVFSGLADATAATADAAADAAANNGGVFAG---LVTATEAAITMLHDALKGAGVEQSYGYAIIGFTLFIKGVTFPLTYQQLASTTKMQTLQPKVKDIQKRLANNPEAANKAIADLYKEEEVNPLSGCLPSLAQIPIFISLYRALLNLAKENKLDEGFLWLPSLEGPVFGAPPTESLNWIKTWENGVPALGWHDTLCYLSIPVILVITQSISQQLISPPKKEGAEADTSQA------ILKYLPLLIGWFSLNVPSGLGLYWIVNNIVSTAASVLIRQQLGLPATAGATPGVTAEANATVAKAKVLDAEVV------KSVSDMAPGTQLEEAKGFGSAAQSEGEDVQGEIIAANSSVKPKKSSGKKKRSK 423
[Close]
BLAST of mRNA_Ecto-sp13_S_contig860.20023.1 vs. uniprot
Match: W7U5Y4_9STRA (Membrane insertion protein, OxaA/YidC n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U5Y4_9STRA)

HSP 1 Score: 286 bits (733), Expect = 1.210e-85
Identity = 156/316 (49.37%), Postives = 208/316 (65.82%), Query Frame = 1 
Query:  175 RGLQAMVDPG----MLHGVDPA---WLHQVLTGIADG------DVAAAVADEAAKGGG--------GGFHPIELLTGVTEGAITGLHDVLASMGVPSAYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTDMMSWIKDWSDGAPKLGWHDTIAYMTIPIILVITQSISTRIMQPAKDPSQPVDESQAASQNASIVKFLPLMIGWFSLSVPSALGLYWILNNFISTATSVFIR 1059
            R L+A+VDPG    ++H   P+   WL Q L G+AD       D A AV       G         GG+    +  G  E AIT +H+ L   G+ + YG+SII FT+ VK +T PL Y+Q+ STTKMQ + PK+KE+QA+Y ++P    Q + QLY   NVNPLAGCLPAL QIPIFISLYR+L NLA  N+L E FLW+P+LEGPT+ + P D M+W+K W    P LGWHDTIA++T+P+IL+++QSIS +I+QPA +   P      A Q+ +I+KFLP M+G+FSL+VPS LG+YWI NN I+T T+V +R
Sbjct:   79 RTLKAVVDPGHVAEVVHTHLPSSSVWLLQTLQGVADAAAATAPDTAGAVEGSKEMTGAAXXXXXXXGGWLAAPI--GAIEKAITFMHETLEGAGLQNTYGLSIIAFTVLVKLVTLPLNYKQIESTTKMQAIQPKMKEIQAKYKSDPTLQQQKMAQLYSDNNVNPLAGCLPALVQIPIFISLYRALTNLAAANELNEPFLWLPNLEGPTYGAGPADGMNWLKQWEGFTPSLGWHDTIAFLTVPLILIVSQSISQQILQPAANKDDP-----NAQQSQAILKFLPFMVGYFSLNVPSGLGVYWIANNLITTLTTVAVR 387
[Close]
BLAST of mRNA_Ecto-sp13_S_contig860.20023.1 vs. uniprot
Match: K8YSD2_NANGC (Preprotein translocase subunit YidC n=2 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YSD2_NANGC)

HSP 1 Score: 287 bits (735), Expect = 5.030e-85
Identity = 155/316 (49.05%), Postives = 207/316 (65.51%), Query Frame = 1 
Query:  175 RGLQAMVDPG----MLHGVDPA---WLHQVLTGIADGDVAAAVADEAAKGGG--------------GGFHPIELLTGVTEGAITGLHDVLASMGVPSAYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTDMMSWIKDWSDGAPKLGWHDTIAYMTIPIILVITQSISTRIMQPAKDPSQPVDESQAASQNASIVKFLPLMIGWFSLSVPSALGLYWILNNFISTATSVFIR 1059
            R L+A+VDPG    ++H   P+   WL Q L G+AD   A A     A  G               GG+    +  G  E AIT +H+ L   G+ + YG+SII FT+ VK +T PL Y+Q+ STTKMQ + PK+KE+QA+Y ++P    Q + QLY   NVNPLAGCLPAL QIPIFISLYR+L NLA  N+L E FLW+P+LEGPT+ + P D M+W+K W    P LGWHDTIA++T+P+IL+++QSIS +I+QPA +   P      A Q+ +I+KFLP M+G+FSL+VPS LG+YWI NN I+T T+V +R
Sbjct:   41 RTLKAVVDPGHVAEVVHTHLPSSSVWLLQTLQGVADAAAATAADTAGAVEGSKEMTGAAXXXXXXNGGWLAAPI--GAIEKAITFMHETLEGAGLQNTYGLSIIAFTVLVKLVTLPLNYKQIESTTKMQAIQPKMKEIQAKYKSDPTLQQQKMAQLYSDNNVNPLAGCLPALVQIPIFISLYRALTNLAAANELNEPFLWLPNLEGPTYGAGPADGMNWLKQWEGFTPSLGWHDTIAFLTVPLILIVSQSISQQILQPAANKDDP-----NAQQSQAILKFLPFMVGYFSLNVPSGLGVYWIANNLITTLTTVAVR 349
[Close]
BLAST of mRNA_Ecto-sp13_S_contig860.20023.1 vs. uniprot
Match: A0A4D9D9H4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D9H4_9STRA)

HSP 1 Score: 287 bits (735), Expect = 1.400e-83
Identity = 156/316 (49.37%), Postives = 204/316 (64.56%), Query Frame = 1 
Query:  175 RGLQAMVDPGMLHGV-------DPAWLHQVLTGIADGDVAAAVADEAAKGGGGGFHPIELLT--------------GVTEGAITGLHDVLASMGVPSAYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTDMMSWIKDWSDGAPKLGWHDTIAYMTIPIILVITQSISTRIMQPAKDPSQPVDESQAASQNASIVKFLPLMIGWFSLSVPSALGLYWILNNFISTATSVFIR 1059
            R L+A+VDPG +  V         AWL Q L G+AD   AAA A +AA    G                       G  E AIT +H+ L   G+ + YG+SII FT+ VK +T PL Y+Q+ STTKMQ + PK+KE+QA+Y ++P    Q + QLY   NVNPLAGCLPAL QIPIFISLYR+L NLA  N+L E FLW+P+LEGPT+ + P D M+W+K W    P LGWHDTIA++T+P+IL+++QSIS +I+QPA     P      A Q+ +I+KFLP M+G+FSL+VPS LG+YWI NN I+T T+V +R
Sbjct:  141 RTLKAVVDPGHVAEVVHTHLPSSSAWLLQTLQGVAD--AAAATAPDAAGAVEGSKEMTSXXXXXXXXXXGWLAAPIGAIEKAITFMHETLEGAGLQNTYGLSIIAFTVLVKLVTLPLNYKQIESTTKMQAIQPKMKEIQAKYKSDPTLQQQKMAQLYSDNNVNPLAGCLPALVQIPIFISLYRALTNLAAANELNEPFLWLPNLEGPTYGAGPADGMNWLKQWEGFNPSLGWHDTIAFLTVPLILIVSQSISQQILQPAASKEDP-----NAQQSQAILKFLPFMVGYFSLNVPSGLGVYWIANNLITTLTTVAVR 449
[Close]
BLAST of mRNA_Ecto-sp13_S_contig860.20023.1 vs. uniprot
Match: A0A7R9UFB5_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFB5_9STRA)

HSP 1 Score: 276 bits (706), Expect = 5.690e-83
Identity = 140/265 (52.83%), Postives = 185/265 (69.81%), Query Frame = 1 
Query:  217 VDPAWLHQVLTGIADGDVAAAVADEAAKGGGGGFHPIELLTGVTEGAITGLHDVLASMGVPSAYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTDMMSWIKDWSDGAPKLGWHDTIAYMTIPIILVITQSISTRIMQPAKDPSQPVDESQAASQNASIVKFLPLMIGWFSLSVPSALGLY 1011
            +DP  L   + G+A    AA VA E AK   GG  P+  L   T  AITGLHD+L  +G+ + YG +II FTL +K +TFPL  +QL ST KMQ + PK++E+Q ++ANNPE ANQ + QLYQ  ++NPLAGCLP+LAQIPIFI+LYRS+LNL+K+N LTE FLW+PSLEGPT+ +   D + W+  W DGAP LGWHDT+ ++TIP+ILV++Q IS +++Q         D  Q    +A+I+  LP MIGW SL+VPS LG+Y
Sbjct:   65 MDPLVLSHAVQGLAQD--AADVASEVAKSDQGGG-PLGPLIAGTSFAITGLHDLLKGLGLQNPYGYAIILFTLLIKAVTFPLNAKQLESTGKMQAINPKIREIQTKFANNPEKANQMIAQLYQQYDINPLAGCLPSLAQIPIFIALYRSILNLSKDNVLTEPFLWLPSLEGPTYGAEQKDALQWLTTWQDGAPMLGWHDTLCFLTIPVILVLSQKISQKVLQS--------DAQQPEGASAAILNILPFMIGWVSLNVPSGLGIY 318
[Close]
BLAST of mRNA_Ecto-sp13_S_contig860.20023.1 vs. uniprot
Match: A0A7S0XYI9_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0XYI9_HEMAN)

HSP 1 Score: 277 bits (709), Expect = 4.480e-81
Identity = 188/473 (39.75%), Postives = 259/473 (54.76%), Query Frame = 1 
Query:    4 GPPLTA---LVAACAMANAGTVSAF-APPG-----LAVSARSRFVPANSWTSRSSAPAARPSASGARGLQAM-----------------VDPGMLHGVDPAWLHQVLTGIADGDVAAA------VADEAAKGGGGGFHPIELLTGVTEGAITGLHDVLASMGVPSAYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPT-----FDSPPTDMMSWIKDWSDGAPKLGWHDTIAYMTIPIILVITQSISTRIMQPAKDPSQPVDESQAASQNASIVKFLPLMIGWFSLSVPSALGLYWILNNFISTATSVFIRNQIANETGDPNMKAPKITLPFMEEEPEVV-----TMPIPREALPDSAAVEETKGFVPTPATLDAEVEGEIVQEDGAPAPRVSTA 1296
            GPP      +V ACA+   G+ SAF APP      LA +ARS   P +      S P A     GA GL+A+                 +D  +L  VD + +H  +   AD   A A      V +EA K   GG   + L+ GV+   +T LH +  +  +P A+G +I+ FT+FVK IT+PL Y+Q++ST  MQ L PK+K +QARY ++P+  N+   QLY+ E VNPLAGC+PAL Q+PIFI+LYR LL LA ++KL ESFLWIPSLEGP        + P D + W+  W DGAP LGW DT+AY+++P+ILV+TQ+IS +++QP      P  +  A  Q  +I+KFLPLMIGWF+L+VP+ LG+YW++NN +ST    +IR Q                  F +E P        TM    E    +  VE  K F P+     A ++      + APAP   T+
Sbjct:   18 GPPAMIARLVVLACAV---GSTSAFTAPPSAGGLRLAPTARSTLSPRS--VRLGSLPLAPTRTLGATGLRAIAEHADAANHFAFLLSTHMDADVLSKVDMSEVHNAVMHFADAAAATAKEAANTVTEEAKKEDDGGIFGL-LVKGVSTCLVT-LHSIFKAANLPGAWGWAIMTFTIFVKAITYPLNYKQMASTISMQKLQPKLKAIQARYKDDPQKQNEMTAQLYKDEEVNPLAGCIPALVQLPIFIALYRGLLELAMQDKLQESFLWIPSLEGPVGKYNPVTNLPEDGLGWLTKWVDGAPPLGWEDTLAYLSLPVILVVTQTISQKLLQP------PQSDDPAQQQTQAILKFLPLMIGWFALNVPAGLGVYWVINNGLSTLQQWYIRQQ------------------FKDEMPVAAGAGGETMSFKDEVRASARTVEPPKAFTPSKPAQPAGLDDRFPPLEEAPAPPKKTS 459
[Close]
BLAST of mRNA_Ecto-sp13_S_contig860.20023.1 vs. uniprot
Match: A0A7S2EC37_9STRA (Hypothetical protein n=5 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EC37_9STRA)

HSP 1 Score: 275 bits (702), Expect = 2.030e-80
Identity = 153/335 (45.67%), Postives = 217/335 (64.78%), Query Frame = 1 
Query:  271 AAAVAD---EAAKGGGGGFHPIELLTGVTEGAITGLHDVLASMGVPS-AYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTDMMSWI-KDWSDGAPKLGWHDTIAYMTIPIILVITQSISTRIMQP-AKDPSQPVDESQAASQNASIVKFLPLMIGWFSLSVPSALGLYWILNNFISTATSVFIRNQIANETGDPNMKAPKITLPFMEEEPEVVTMPIPREALPDSAAVEET--KGFVPTPATLDAEVEGE 1251
            AAA +D   EAA    G F     LT    G +TG+H  L ++G+ + A+G+SI+  TL +K  T PLT  QL STTKMQTL P +KE+QA+Y +NPE  NQ + ++YQT  VNPLAGC+P++ QIP+FI LYR++LNLAK + L E FLW+P+LEGPT+ + PT    W+ K+W DG P LGW +T+A++ IP+ILVI+Q +S ++MQP ++DP Q         Q  +I+KFLPLMIG+FSLSVP+ALG+YW+ NNF++TA ++ +RN + N        +P  + P + +    V  P P  + P      ++  +G  P   T+DAE+  E
Sbjct:  117 AAATSDAVMEAAVNDNGWFG---FLTMPITGLLTGIHGALVAVGMDANAWGVSIVAMTLIIKLATLPLTKSQLESTTKMQTLQPAIKEVQAKYQSNPEVMNQKIAEIYQTNEVNPLAGCIPSIVQIPVFIGLYRAVLNLAKADALDEPFLWLPNLEGPTYGADPTTGSDWLFKNWVDGTPSLGWDNTVAFLAIPVILVISQFVSMQLMQPKSEDPQQ--------QQANAILKFLPLMIGYFSLSVPAALGIYWVTNNFVTTAITLSVRNSLKNAPPPVVTASPSGSGPTVIDAESTVFTPAPMRSKPSGFGESDSASEGMKPI-TTMDAEIVSE 439
[Close]
BLAST of mRNA_Ecto-sp13_S_contig860.20023.1 vs. uniprot
Match: A0A7S2XXH5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXH5_9STRA)

HSP 1 Score: 274 bits (701), Expect = 2.090e-80
Identity = 131/232 (56.47%), Postives = 172/232 (74.14%), Query Frame = 1 
Query:  406 YGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYAN-NPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTDMMSWIKD-WSDGAPKLGWHDTIAYMTIPIILVITQSISTRIMQPAKDPSQPVDESQAASQNASIVKFLPLMIGWFSLSVPSALGLYWILNNFISTATSVFIRNQIANETGDPNM 1095
            YG++II FT  +K +T+PLTY Q++STTKMQ + PK+KE+QA+    NPE ANQ +  LYQ E VNPLAGC+PAL QIPIFISLYR+LLNLA E KL E+FLW+PSL+GPT+ + P D M+W+K  W DG P LGW DT+A++T+P+ILVI+Q IST+IMQP   P +P        QN  + K LPLMIG+FSL+VPS L +YW+ NNF++T  ++F+R Q+   T  P +
Sbjct:  125 YGVAIILFTAIIKAVTYPLTYTQIASTTKMQAVAPKIKEIQAKVGQTNPERANQLIADLYQKEQVNPLAGCVPALVQIPIFISLYRALLNLAAEEKLNEAFLWLPSLDGPTYGASPADGMNWLKTGWEDGVPPLGWPDTLAFLTLPVILVISQYISTQIMQPKVKPGEP----DPMEQNQLLFKVLPLMIGYFSLNVPSGLAIYWVANNFLTTGLTLFVRKQVEAATAGPQV 352
[Close]
BLAST of mRNA_Ecto-sp13_S_contig860.20023.1 vs. uniprot
Match: A0A7S2H5X8_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H5X8_9STRA)

HSP 1 Score: 273 bits (698), Expect = 5.230e-80
Identity = 164/348 (47.13%), Postives = 219/348 (62.93%), Query Frame = 1 
Query:  256 ADGDVAAAVADEAAKGGGGGFHPIELLTGVTEGAITGLHDVLASMGVPS-AYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTDMMSWI-KDWSDGAPKLGWHDTIAYMTIPIILVITQSISTRIMQP-AKDPSQPVDESQAASQNASIVKFLPLMIGWFSLSVPSALGLYWILNNFISTATSVFIRNQIANETGDPNMKA-PKITL-PFMEEEPEVVTMPIPREALPDS--AAVEETKGFVPTPATLDAEVEGEIVQEDGAPA 1278
            A  +V  A AD A+  G  GF     LT   EG +  +H+ L S G+ + A+G+SII  TL +K  TFPLT  QL ST KMQ L P +KE QA+Y +NPE  NQ + ++YQT NVNPLAGC+P+L QIP+FI LYR++LNLAKEN L ESFLW+P+LEGPT+ + P     WI K+W DG P LGW DT+A++ IP+ILV++Q  S +IMQP ++DP Q         Q  +I+KFLP MIG+FSL+VP+ALG+YW+ NNF++TA ++ +R  + NE   P M A P  +  P + +  + V  P P    P    A  E   G V     +DAEV   + +E   PA
Sbjct:  106 ASPEVMEAAAD-ASNNGWFGF-----LTLPIEGLLNIIHNTLVSTGMDANAWGVSIIVMTLVIKAATFPLTKSQLESTNKMQALQPVIKEAQAKYQSNPEVMNQKIAEIYQTNNVNPLAGCVPSLVQIPVFIGLYRAVLNLAKENALDESFLWLPNLEGPTYGADPASGSDWIFKNWVDGVPSLGWDDTLAFLAIPLILVVSQYASMQIMQPKSQDPQQ--------QQANAILKFLPFMIGYFSLNVPAALGIYWVTNNFVTTAITLLVRQSMKNE---PIMAAAPSASAGPSVIDAEQTVFTPAPMREKPAGFGAETEVEVGGVKPITPMDAEV---VAEETAPPA 433
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig860.20023.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LUC7_ECTSI1.510e-28295.84Alb3 homolog, thylakoidal inner membrane insertase... [more]
A0A835YLS0_9STRA3.440e-11350.23Alb3-like protein, thylakoidal inner membrane inse... [more]
W7U5Y4_9STRA1.210e-8549.37Membrane insertion protein, OxaA/YidC n=1 Tax=Nann... [more]
K8YSD2_NANGC5.030e-8549.05Preprotein translocase subunit YidC n=2 Tax=Nannoc... [more]
A0A4D9D9H4_9STRA1.400e-8349.37Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7R9UFB5_9STRA5.690e-8352.83Hypothetical protein (Fragment) n=2 Tax=Pinguiococ... [more]
A0A7S0XYI9_HEMAN4.480e-8139.75Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A7S2EC37_9STRA2.030e-8045.67Hypothetical protein n=5 Tax=Ditylum brightwellii ... [more]
A0A7S2XXH5_9STRA2.090e-8056.47Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2H5X8_9STRA5.230e-8047.13Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig860contigEcto-sp13_S_contig860:10407..20309 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score799.3
Seed ortholog evalue9.4e-229
Seed eggNOG ortholog2880.D8LUC7
Preferred nameALB3.1
Model size2319
KEGG koko:K03217
KEGG TC2.A.9
KEGG Pathwayko02024,ko03060,ko03070,map02024,map03060,map03070
KEGG ModuleM00335
Hectar predicted targeting categorychloroplast
GOsGO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006605,GO:0006612,GO:0006810,GO:0006886,GO:0006996,GO:0008104,GO:0008150,GO:0009507,GO:0009534,GO:0009535,GO:0009536,GO:0009579,GO:0009657,GO:0009658,GO:0009668,GO:0009987,GO:0010027,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0017038,GO:0019904,GO:0022607,GO:0031976,GO:0031984,GO:0032991,GO:0033036,GO:0033365,GO:0034357,GO:0034613,GO:0042651,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0044743,GO:0045036,GO:0045038,GO:0045184,GO:0046907,GO:0050789,GO:0050793,GO:0050794,GO:0051179,GO:0051234,GO:0051259,GO:0051291,GO:0051641,GO:0051649,GO:0055035,GO:0055085,GO:0061024,GO:0065002,GO:0065003,GO:0065007,GO:0070206,GO:0070208,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0072594,GO:0072596,GO:0072598,GO:0072657,GO:0090150,GO:0090342
Exons12
EggNOG free text desc.membrane insertase activity
EggNOG OGsCOG0706@1,KOG1239@2759
Ec32 ortholog descriptionAlb3 homolog, thylakoidal inner membrane insertase
Ec32 orthologEc-14_004480.1
Cds size1353
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko02044,ko03029
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig860.20023.1prot_Ecto-sp13_S_contig860.20023.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig860 10407..19343 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464132.481796-CDS-Ecto-sp13_S_contig860:10406..104481681464132.481796-CDS-Ecto-sp13_S_contig860:10406..10448Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig860 10407..10448 +
1681464132.5003755-CDS-Ecto-sp13_S_contig860:10711..107631681464132.5003755-CDS-Ecto-sp13_S_contig860:10711..10763Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig860 10712..10763 +
1681464132.51098-CDS-Ecto-sp13_S_contig860:11022..110971681464132.51098-CDS-Ecto-sp13_S_contig860:11022..11097Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig860 11023..11097 +
1681464132.5212681-CDS-Ecto-sp13_S_contig860:12271..123521681464132.5212681-CDS-Ecto-sp13_S_contig860:12271..12352Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig860 12272..12352 +
1681464132.531467-CDS-Ecto-sp13_S_contig860:13582..138451681464132.531467-CDS-Ecto-sp13_S_contig860:13582..13845Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig860 13583..13845 +
1681464132.5421698-CDS-Ecto-sp13_S_contig860:14473..146191681464132.5421698-CDS-Ecto-sp13_S_contig860:14473..14619Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig860 14474..14619 +
1681464132.5511231-CDS-Ecto-sp13_S_contig860:15264..153891681464132.5511231-CDS-Ecto-sp13_S_contig860:15264..15389Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig860 15265..15389 +
1681464132.5598047-CDS-Ecto-sp13_S_contig860:15843..160011681464132.5598047-CDS-Ecto-sp13_S_contig860:15843..16001Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig860 15844..16001 +
1681464132.5689344-CDS-Ecto-sp13_S_contig860:16640..167631681464132.5689344-CDS-Ecto-sp13_S_contig860:16640..16763Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig860 16641..16763 +
1681464132.5815432-CDS-Ecto-sp13_S_contig860:17385..175011681464132.5815432-CDS-Ecto-sp13_S_contig860:17385..17501Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig860 17386..17501 +
1681464132.5980022-CDS-Ecto-sp13_S_contig860:18213..183461681464132.5980022-CDS-Ecto-sp13_S_contig860:18213..18346Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig860 18214..18346 +
1681464132.610347-CDS-Ecto-sp13_S_contig860:19304..193431681464132.610347-CDS-Ecto-sp13_S_contig860:19304..19343Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig860 19305..19343 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464132.6274388-UTR-Ecto-sp13_S_contig860:19343..203091681464132.6274388-UTR-Ecto-sp13_S_contig860:19343..20309Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig860 19344..20309 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig860.20023.1

>prot_Ecto-sp13_S_contig860.20023.1 ID=prot_Ecto-sp13_S_contig860.20023.1|Name=mRNA_Ecto-sp13_S_contig860.20023.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=451bp
MGPPLTALVAACAMANAGTVSAFAPPGLAVSARSRFVPANSWTSRSSAPA
ARPSASGARGLQAMVDPGMLHGVDPAWLHQVLTGIADGDVAAAVADEAAK
GGGGGFHPIELLTGVTEGAITGLHDVLASMGVPSAYGISIICFTLFVKGI
TFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVN
PLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPP
TDMMSWIKDWSDGAPKLGWHDTIAYMTIPIILVITQSISTRIMQPAKDPS
QPVDESQAASQNASIVKFLPLMIGWFSLSVPSALGLYWILNNFISTATSV
FIRNQIANETGDPNMKAPKITLPFMEEEPEVVTMPIPREALPDSAAVEET
KGFVPTPATLDAEVEGEIVQEDGAPAPRVSTASAKTPKGSKKKKKKRARK
*
back to top

mRNA from alignment at Ecto-sp13_S_contig860:10407..20309+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig860.20023.1 ID=mRNA_Ecto-sp13_S_contig860.20023.1|Name=mRNA_Ecto-sp13_S_contig860.20023.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=9903bp|location=Sequence derived from alignment at Ecto-sp13_S_contig860:10407..20309+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGGGCCACCATTGACAGCGTTGGTCGCGGCCTGCGCCATGGTAAGTCT
CGTGGCGTGCTCTCGTGTGTGCATCTGCTGCGCATCTGCGGCCTAGGCAG
CTGCTGTAGGGCGTTCATGCTACACCCAACTGGGTCTGACGAGGTTGATC
ACCCCTCGTTTCTTTGCTCTCCTGCACCGACATCTTTGGGGCGTTGTTGC
TAGGGTAGGCCAAGGGCAGGGTATTGTCAAGCCTTCGCCTCCTGCTTTTG
ATGACCTCTCGACTCGTTCCTCTGTGCTCTGCGTGCCTGCTGCTGAGGTG
AGCAGGCCAACGCAGGAACGGTGTCAGCTTTTGCCCCACCTGGCCTCGCG
GTATCAGGTGAGACCCGCGGCGGTAGCGCACACATGCTTACGAGTCCAAT
TCATTCCATTGTAGCAATCCTCAGCCTCTATCCCGTGTAGCGAAATTGTG
AACGGCTAGCTGACCCTGGTTCATTTGCCATGCTCGTTGTATCATACCCC
AATCTTACAATACCCAAAGGCATCCTCCTTCCAAGTATAAGTGCAAGTCA
TGTTTGCCGTCTGCGCGTTCAACCACGCTCATGCGTTGCTTCTCCTCTCC
TCCCTTCGCACAACAGCTCGCTCCCGGTTTGTTCCTGCTAACTCGTGGAC
GTCGAGATCAAGCGCACCAGCAGCGCGTCCTTCGGCGTCAGGTGTGGCAA
TATACTGGCATTTATTCCCTTGTTTCTCCGCCGTCACATATCGTCGTTGT
TCGGCCTCGAGCCACTCTTTTAAAGGAAAATATACAACAGAGACTTCGAT
TCGAGATATAAGCGCGGCAGTCGAACGGATGTGTTGGGAGTCTTTTCTTC
TTTTAGGCGGCATCGACGTTACCTTGTCAAATGAGTACGCACAAGAGGAT
ACGTCCATCGAAATGCACTACGGTTGGCGAGCATATGTACGTGCACCACC
GGCTAAATTTGCACGGGACTGCTGATATCGAGCGTGTCCTCTGTAAAGCC
TTCCCTGTAGAGTGTACAAAAGCGGGGGTGGGAAGGGTAGGAGGGGCGGA
GTTCTTCGAGGACCCGAGGCCTTTGCCTCCTAAGATTTTGTCTCTTGCGA
GTTTCCTAAGCAGCTGTAGCCGTAACCCTGAACTGCAGGGTGTTCGATAA
ACCAAAGCAACAACAGCGAGGGCTGTGGCGATTGCTCTCGGGAAGCCTGT
TCAAAGTTCAAAACCGCGGACTGTACAAGGGTCCGTGCTGCACACATACA
CACCCGGACGCCGTTTAGTAGATGATATCTGGCGTTTGCTGCCTACCCAA
TGCCAACCTCATGTGCGTACATATCCGTAACCCAGCCATGCCGATGAACC
CGAGGCTGACCTTGACAGCCTCGTGGTGTCGTTTTTCTCTCGGGCATAAA
ACAACGTTGTTGATCGACAGTACAGCAGTAGTCAGATGCCAAAGGTCGCA
CGTACGCTATTTGTGTTGAAGAGTGCGATATGTCCCATCTCCCGATAAGG
GTGTTGACAGCGCACTGTAAGAAGGCGGTGTCCCTGGGCCACCGCTCGGG
TCATGCTCCATGTACATGGGCTTGCTCGTCTACCAAGCACCTGTGTTCGA
CGCGAGTTCCTGGTTTTACGTGAGAAAACGGCTTCACGGAGTGTGTGTAG
CTGCGAAGGTCGCCCTGCAGCTGTTGGAAAGACGAGAGTGATACGCCCTC
ATCGAGCACCCCGCCCTCTTCCAGTCCAGTGCACACGTCCTCACTCGAAG
TCCCGTTACCCGCTCTGGTGCTGCGCGTGGTGCCGCGCTCGTTTTGGTCG
TTCGCGAATCGGTTTCCGTCCACGCTTTTCCGCTGTTCGTCGTTGCGGCG
CCTTGTCGAGGGCAGGGGCACGAGGGCTGCAGGCGATGGTGGACCCGGGG
ATGTTGCACGGGGTGGACCCGGCATGGTTGCACCAAGTCCTGACAGGTGT
GTCGTGTGTTTTATTATTAGTATCGACCGCGCAAACCGGCTGACCATTGA
AAACACGTCAGTCTCGGTGCTTGAAACCACAAAACACTTGTAAAGGCCAT
CAACTGGGACCCCGTGAGGGCCCATGAGGGGGCGGCATTGGGGAGGCTAA
GCTATTCTCCGGATGAAAGACAGAAACAGTAGCAACAGAAGAAAACTGCA
CGCGTCCACCGAGGCTGCTACCGTGCACTCGAGTTCGTTTTGGAGTGCTG
GCACCATAGTTCTCCTTGTTTCACCATCATTCTCATCATCATTGTTACAG
CAATTTTACGGCAGATCTTCTCTGACCCTGCGTCGTTTCTTGCTCTCCTG
CACGCCATGATTCCATCCTCGATTGCTGTCTTGGTCTTTGTCTTGTCCTC
CCGTTCCCTCTCCTCCTCCTTCATCGCTTCGAAATGGATCCCTTTATCTG
TACTACCACTTTTATCCCAACCTATTGGCCGTGGTGGAAATGGATCAATC
AGTATCCATGTCGTTTGAATACACCACTGATTCATATTGACATATTCTGC
CAGTGTTTTCTGCCAGTATGAACTCATGACGTTTTCAAAGGTCATGAACT
ACCGATCGACCAGTTTCCACTACGGTCAATAAGTTGGGATCTCAGTAATA
GTACAGTTAAAGATGATGTGCGTATGTGCGGCGACATTTGACAGTGTGGA
TGTGTAGATATTGGATAGCTCCGAGAGTGGTGTATTTCATGACCCTCTTG
GCGGAAGCCCCGGGAACGTAGAACTACTCCACTTTGATTTACACGTTGAG
ATGTTGTCGTCCTCCCCACCTGGCGTAGGTTAGTAGTTGTGCGGTTGGCG
AACAGGCGGGGAAGGTAGGGACTAGAGAAAGGGATGTTGTTTCCCTGTTG
GCCAAGCGTTGCTTGAGGGAGATAGATGTCGATTGACCTGTCTGCAGATT
GGTCTGTTAAGCGCGTCGTGGTCGCCACCAATTTTCCTTGCGCCCAAAAT
GTCGTGGTCTCCGCGTCTATTATCCAGCACGACCACAGCAGTCTTCCAAG
CGCTAGAAATCATCGAGGAGAAGCGACCCGCTTGTTTGTCACCGGCAAGA
CCTCCTGTGACGGCCCTATCCTTGGACTCTTTTGCACAACCAACGCGAAC
CAACCGCAACCTGTTCTGCCGTTGCTTGCGGCCCGTGTGTGTGTGCGCGT
TTTTTTTGGCGCGCATGACGTGCCAGGAATTGCGGACGGCGATGTGGCGG
CGGCGGTGGCCGATGAGGCCGCCAAGGGAGGTGGCGGCGGCTTCCACCCG
ATCGAGCTCCTGACGGGAGTTACCGAGGGGGCCATTACTGGCCTGCACGA
CGTGCTTGCGAGCATGGGGGTGCCCTCCGCCTACGGCATCTCCATCATCT
GCTTCACGCTCTTCGTCAAGGGCATCACCTTTCCCCTCACGTACCAGCAG
CTCTCGAGCACGACCAAGATGCAGACTCTCGGGCCTAAGGTGTGTGTGTT
GTTTGTCGGCGTTGCGATGACGGGCAGGGGACAGGGGTAGGGTGAGTCGC
CTTACGCTCCCCAGTGCAGTGTTTTTCTTTTTGTGTGAGCGAGAATGCGA
AGAGAGCTCGGGCTGGAGAGACGAAGAGCGAGCTTTGCGTGATGTTCGTC
GGCGCGATGTTGATTGTGGGCGACTGTTTTGTAGAGATCCCTTGGCAAAT
CCTCACCAGCAAACCTGACTCTTGACAGAAATTCGTGTGGTGTTTGTTCG
ATCAAACAAAAAGGAGCAAAAGCCCCAACTAGCATCAGGACGGATATTGT
GGAGTCGCGAGTCCAACAAGTAGTAGGCGGTGACCAGCTACGAAGAAGTA
TCAGCTTTCAGATGCTACCGATACCACACCGCCCGGAGAAATCAGCCAAG
CCTTGGCACGTCAAGCGAACACGAATCTACCGGCGCTCAAATATTGACTC
CTGTTTGAAATGGGGCGCAGCAATAGCCTAGAAAATCCGTTTTTGGGGGG
AAAAAAGGAGAAACTCGGGAGAAAACACGCAAGAAAAGGACCAAGTCGGG
GTTCCACAAGGTATGGCGTCGTTACAGTACCCACCCTCCTATGGATTGGA
ACGCACGAATGGAACAGGTGAAGGAGCTGCAGGCGCGATACGCGAACAAC
CCCGAGGCGGCCAACCAGGCGGTGCAGCAGCTGTACCAGACGGAGAACGT
CAACCCCCTGGCAGGGTGCCTGCCCGCGCTGGCGCAGATCCCCATCTTCA
TCTCGCTCTACAGGTGTGCGTGGGAGGTGACGTGTATCTTATGTCTGGCA
GCAGCTTGTAGCTTCAAATCGCGTAGGCCAGGGTTTGGTGCCCCCCCCCG
CAAGATTTGTGGGGTTCTCTAGGGGCTGCGTGATGCGTGGTCGTGCCGTG
CGCCTCTCTATCTTGTTCTATCTACGGGCTTGAAAAGGATATCAATTATC
TTGGTAGGTTTGGCCGCCACGACGGACGGAAACAAGTTGTGGGTGGCCAA
GGTCGTGGGTTCGAACCCCGGCGCGACGTTGTGTAGCAAGCACGTGCTTG
TGGGTAAACTGTAAGCTAGTATTTTTCATTGACAAAGGAAGAAGGGCTGC
TGACCCTTTTCGTGATAACATGGAAGGCAGGCCCCGGTGGTGGCGCCGGG
TCTAAGCTCCTCACGAGAGATAACGTCGAGAGCGTGTTTGCTGTCTGCAC
ATAGTTTGCTCGACGCTGGTAGCGTGGATGGTTACAGCTGACGAGGGTAC
AGCAACAGTCCCGTTGGGTGTTCGTGTTCGCACCGCCGCTTTGTCCACAT
AGAGACCCCTAGACTCTGTTGCTGTATGTCGTCGATTCATACAAGAAAGG
AGCTGATACAATTGATGCTGGACACACGCCTCCTTCCTTCGCCCTATTTC
GCGCGAAGGTCCTTGTTGAACCTGGCAAAGGAGAACAAGCTGACGGAAAG
CTTCTTGTGGATACCGAGCCTGGAAGGCCCCACGTTCGACTCCCCGCCCA
CCGATATGATGAGCTGGATCAAGGATTGGTCAGGTACTGTAGCCACCACG
AAGCGATGCACTTGGTACAATTGGCAATCAATCAACCACGCGTCCGTTGA
GAAGACCCGTCTGTTCCCAACCAGCCCAGCGGCAAGTGTTACTTGTAGCT
CCGGTTATCCTTCGGTTTTGTTGCTGGCCTCTCAGGTTTTGGTGTGGAGG
CCAGCTCTTCTTGTAGCGGCAGGTGTCTCGTGTACACTACCTGACACTGG
GTTGGTTCAGCTTCTCCTCTGCCCCCCCCACCCCCACCCCCACCCCTCTC
TCTCTCTTCAGCTTGTTGTTCGCTGGTCCCCGCTCATGCGCCGCAGATGC
CTCCACCTTTTACTGAAAAATCTCAAGCGTGTTGTTCTTTTGGTGTCCGA
CCGCGTGCGCTTGGTCCCCTGACCCTTGCTGTTTATCCTCTTCCTCCTCC
TCCTCGCCGTGTTTTTCTCTCCGTCCGCCGAGGCCAGACGGCGCGCCGAA
GCTGGGCTGGCACGACACCATCGCGTACATGACCATCCCCATCATCCTGG
TCATCACGCAGTCCATCTCCACGCGGATCATGCAGCCGGCCAAGGACCCC
TCCCAGCCGGTCGACGAGTCGCAGGCAGCGTCGCAGAATGCAAGTGTTTT
TTTTGTCTCTTCACACCCGTGGGAGAGGGTTAAGGCGCCGGGGTCTTCGC
TGTTCGTAGTAGGGGTGGGTGGGGCGGGGTATTGCTTCGGGCGGGGAGGA
GTCGAGTAGGGCACAAAACGCCGCGCTGCTCTACGATCGGTACATCTAGA
TTGAATGAGGTTGGGGCGTGGGGGCTACGCAGAATCCCAGAATAGCCTTT
AGGAGGCGGGGGAGGGGGAGGGGTGAAAGCATGCCGAGATTTCGTGAGAA
GGCAGCAGACCTACCGTTCAGTGGATTGATATGCTGGTCCGTTAGCCATC
ATGTGAACGGGCACGTTTACACGAGCAGCACGGAGCGAATTTTTTGGCCG
TATTGTCGCCATTTTCTGCTGTTTTGCGGTTGTGGGGCGCGTCGGGCACA
TGTTTCAGCTCACAACCCGCAGACTGAATAAAAATAGCGCAGTTCGCAAG
TTTTGATGGCACCGGCCTTTTTCGTGGTCTGTTTTGATCCTGTGCTCTTG
CTGTTCATTCACTCCGGCTGACTTCCTCTGTCGAGGCGTGTTTTTGTTGT
TCCAGGAGCTGTCTCGTTTTCTCAAGGGTGCCTTTCCCCGTTTTCCCCGT
CCGGCCCGATCACTAATTTTTGTGTCACAAGCAGATCGTCAAGTTTTTGC
CGCTGATGATCGGATGGTTCTCGCTCAGCGTCCCTTCGGCGCTCGGGCTT
TACTGGATCCTCAACAACTTCATCTCCACGGCAACGTCGGTGTTTATCCG
CAACCAGGTCAGAACAGGAGGGGAGAGGGTACTCGTTTCGGTCTAGTTCA
TGTTTTGTTTCATTTCCACGTCCGGGTGTCACTGCTGTCGACCTTCAAGT
GCGCCCCCTGGAGGTCGATACTGTCTGCAACCAGGATTCTTCACATGTTT
GGGGAAGAAGCTTGAAACACGCAATTGGGGTCGATGAGAACGTTCTGGGC
AACTTATTCAGGGTGTGATGTTCTTCTCGAGACTGCTTCTTTGTTTTTGG
ATGACTTGAGGCGCTTGGATTGGCGGCGGTGTGTCTCCTTCAATGGGGCT
TCCCTCCCTCCCCCCGTCTCCGTCTCCACCCGGCCCCCGGCCTTAGTCTT
GCGCGAGCTGCGACCTGCCCCATGGTATATGATGTCGTCGCTCTTTTGCG
GTTTTCCCCTTTGGATTGTTGGTGTTGTGTGTGTCGCACGACGACCAAAC
AAACGAATGACAGAAAAAAAAAAATGCACACTCGCTCACGGGTTCTCAAG
TCACTGCGTTTAGAAGCACTTCGTCTTTCCAAGCGCATTGAGAATGACGT
CTTTTCAGTGGTCAGCCGCTTATCGCGTCGATGTCAACAATGATACGCGC
ACACCCACACCCACATCCACATGACACAGATTGCCAACGAGACGGGCGAC
CCCAACATGAAGGCGCCCAAGATAACCCTGCCGTTCATGGAGGAGGAGCC
GGAGGTGGTGACGATGCCGATACCGCGAGAGGCTCTCCCTGACAGGTATG
GTCGAAGGAGTCATCATATACTCGTGTACCGCTGGTGGGAGTGGGCAAAG
CCAATGCGACCTGGCCATACCAAACGCTGGAGTCCTTGCCGTTTGGTTTG
CGGCGAAGAGAGGGTTGGGAAACTGCGGGCGACGGGGTGCATTTCCGCGC
GTGATTTTTGCGTGTTGAGTGCAAACTAGGAAGGGCTAGGGTCGTTTGAT
ATAGCTGTCACATTTCGCCCGTTCCGGCCCACGTTTGGAAATGAAAAGCC
ACTTTCGTTCCTCAAGCCGGACATGCATCACTGGCAAAGTAGGCCACGTC
TCGTTGGCTTGTTTGTCGGGTTGTGTGCGTGGTTGTGTGGTGGTGGAAAG
GTCGTCTGGTTTTGTGTATTTTCTTGTTTTTCAGGTGTTGATTGCGATAA
GTGCAGTCTATGCCCTCCCCCCTCCTCCCCCCCCAAAGGAGTCCAGCTGA
CGGGTGGATCGTAAGTCGTATCGACGCGGTAATGGATGACGGCAACCCTT
TCTTGCGTCCGTTTTTCGTTGCTGTGGCGCCTGTTCGACCCGGTGTTGCC
CTCGTTTGCGGTGTTGTAAACCCATGTGCCTTTTCCGCTCCGACGGACCG
CATGTCCACTGCTGTCGGTGCCCCTTCTGCTGTTGTGCGCCATCCCGCCC
CGTGCTTCGCAATGACATACAAAAAATATCCGCAACCAAAACGTTGCTCT
AAACCAGCGCTGCGGTGGAGGAGACGAAGGGGTTCGTGCCTACTCCAGCG
ACGTTGGACGCGGAAGTCGAAGGGGAGATCGTACAGGAAGACGGGGCGCC
GGCGCCCCGCGTATCCACGGCATCTGCGAAAACCCCCAAGGTGCGTGGAG
GCAGCCGGCGTGGCCCGCCAGAGGAAATCAACCATTCTGATCAAAATTTA
ATTGGCGTGCTGCTTTCCCTCGAAGCACGCGGCGGCGTCTGGAGAACGAT
GCTGTCGCGTGTGTTGGTTTGGTAGTGTTTTTGTCGGATTTCCTCCGGGA
GCTTGGCCAATCGGTGGCGCGTGCTTGCATGTGAATGGGTGTTCGTTGGC
GTACGGGTGGCATACAAGATGGTGGAGAAGTCGGTCACACTCGTTAATAT
TTTAGCAGCGTCATGCTCCTTGGAGCCCGAGGGTCTCCTTGGAGCCCGAA
CGTGCTCCATGGGAGTTATCACCACACGGCGTCGAAGGCGAACTGTGTGG
TAGGTTGGAGTGTGTTTGAGAGGCTTGAGCGGCAAGGAAAATGTGGTCGA
AATTTGTTCCCGGTGTTTTATCTCTTTTCTTCTTCCTAGCTCTCCTCTTC
AATCTCTCTCTCTCTCTCGCCTCGTGTCATGTCTGCGTCCAAGTTGGAAA
TATCGAGTGCGTCCTGTTCATTTCATGCTCATGTTAAACCTACAGGTAGT
GTTAGATACTCTGAGTGTGTTCATACATCCGATGCGATCTTTCCGGTATG
TGCTTGTGCTCGGCCACCTCGTCAACTTGGCCCCATTTCCTAATAGCAAC
AAGTACCAGGCAGAATAGTTTCAACCGAGGAGCGATGCGATCCCTCGCGA
GGGTTGGTGCTGGTGGAAGGATTAATATTAGATGGACGGGAATACGATGA
GGGCCGCTTGTGTGCGCTCTGATGGGCGTGGTAGTGACGGACAACAGGTT
TGAACAGAGCCTCCTCGGCCGGCCCCAGCACACCCCCGCCGCCTCCTGTT
CACGTGCTCTCTAACTGACATTGCCATTATGTGACTCGTACGTGTGTTTG
TTTTTCGTATTTGGCGATCGCGTACATGCACCCCGCTGGTGCGAACAGGG
GTCGAAGAAGAAGAAGAAGAAGAGGGCACGGAAGTAAATGCGACGGAACG
TGATTGGGCGCCGCCGTCGAGCACTGCTGCGCGCGACGATGAATTCGAGT
GGCATGAAGCTGGCAGCGCACGCCGCTCTATGGTAGGAGCATTTTACGGG
AATATTTGCAATCTCCAGCTACTGTGACGCGTCATGCCACGAGTGAATAG
CGAGCATGTACCCCCCCCCACCTGCGCGCCCCTGTTGTGTCCCAACCGAC
CCCATCCCCGGTGACTAGCACTAGTGTTTTGCGGTTGTTTTCTGTCTTGT
CTCGTTCGGGGTGAAAAAAGTGGGAGAAAATGCTCGGCAATGTCGCCGCC
GGGTGCGTTGTGTTTCCTCTTGAGCTATTTGTAGATGAACTTTACTATAC
CTACGAGCGGTGAATGTGCACGGTGGGTTGGGATTCTGGCATTGTTGTTA
TGCACACAACGTGGTTGAGTCGGAACGGAACACAGAACTGAACACGTTCA
GCGATTCGGCTCGCATGTCTTGTGACTTCATACCACCGTCTGTTGTTGGG
GGCCGAGGCCACTCGTCAGCGGAAGATAAGTCTGCCGTGTTAACGCACTG
GTATCCCTACGATAGAAGAGCTCTGTGCGCGGCGGGGCGAGAAGAGGGAG
TGGGACGGAGATAGAGTTCTACGTTTTGCCGCAACCCACAGCAGCAGCAG
TTGCAAACATGCGATGCTGGGGGGGGCGCGTCTGCAAAGTCTTGCCGGCA
GTTTATGCCGTGGATGGAACGGAACACACACGTGTTTGTTTGGAGGTTTG
GGTGTTGTCATTTGCGAGATTACAGCCATAGAAGGTTTTTGGGTGCGTCC
TCCTGTCTGCGAGCGCTGAGTGCGAGGAAGATGAGAGGGTCCCGCTACTC
TCGACAGTGTTGGCATACTAAATCAGGACGTTACACTTTTTTGGAACGAA
ACGGGTATAGCATCCGCGTGTGTAGATTCACCCGGTGCTTGCTTCATGCT
GGA
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig860:10407..20309+

>mRNA_Ecto-sp13_S_contig860.20023.1 ID=mRNA_Ecto-sp13_S_contig860.20023.1|Name=mRNA_Ecto-sp13_S_contig860.20023.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1353bp|location=Sequence derived from alignment at Ecto-sp13_S_contig860:10407..20309+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGGGCCACCATTGACAGCGTTGGTCGCGGCCTGCGCCATGGCCAACGC
AGGAACGGTGTCAGCTTTTGCCCCACCTGGCCTCGCGGTATCAGCTCGCT
CCCGGTTTGTTCCTGCTAACTCGTGGACGTCGAGATCAAGCGCACCAGCA
GCGCGTCCTTCGGCGTCAGGGGCACGAGGGCTGCAGGCGATGGTGGACCC
GGGGATGTTGCACGGGGTGGACCCGGCATGGTTGCACCAAGTCCTGACAG
GAATTGCGGACGGCGATGTGGCGGCGGCGGTGGCCGATGAGGCCGCCAAG
GGAGGTGGCGGCGGCTTCCACCCGATCGAGCTCCTGACGGGAGTTACCGA
GGGGGCCATTACTGGCCTGCACGACGTGCTTGCGAGCATGGGGGTGCCCT
CCGCCTACGGCATCTCCATCATCTGCTTCACGCTCTTCGTCAAGGGCATC
ACCTTTCCCCTCACGTACCAGCAGCTCTCGAGCACGACCAAGATGCAGAC
TCTCGGGCCTAAGGTGAAGGAGCTGCAGGCGCGATACGCGAACAACCCCG
AGGCGGCCAACCAGGCGGTGCAGCAGCTGTACCAGACGGAGAACGTCAAC
CCCCTGGCAGGGTGCCTGCCCGCGCTGGCGCAGATCCCCATCTTCATCTC
GCTCTACAGGTCCTTGTTGAACCTGGCAAAGGAGAACAAGCTGACGGAAA
GCTTCTTGTGGATACCGAGCCTGGAAGGCCCCACGTTCGACTCCCCGCCC
ACCGATATGATGAGCTGGATCAAGGATTGGTCAGACGGCGCGCCGAAGCT
GGGCTGGCACGACACCATCGCGTACATGACCATCCCCATCATCCTGGTCA
TCACGCAGTCCATCTCCACGCGGATCATGCAGCCGGCCAAGGACCCCTCC
CAGCCGGTCGACGAGTCGCAGGCAGCGTCGCAGAATGCAAGTATCGTCAA
GTTTTTGCCGCTGATGATCGGATGGTTCTCGCTCAGCGTCCCTTCGGCGC
TCGGGCTTTACTGGATCCTCAACAACTTCATCTCCACGGCAACGTCGGTG
TTTATCCGCAACCAGATTGCCAACGAGACGGGCGACCCCAACATGAAGGC
GCCCAAGATAACCCTGCCGTTCATGGAGGAGGAGCCGGAGGTGGTGACGA
TGCCGATACCGCGAGAGGCTCTCCCTGACAGCGCTGCGGTGGAGGAGACG
AAGGGGTTCGTGCCTACTCCAGCGACGTTGGACGCGGAAGTCGAAGGGGA
GATCGTACAGGAAGACGGGGCGCCGGCGCCCCGCGTATCCACGGCATCTG
CGAAAACCCCCAAGGGGTCGAAGAAGAAGAAGAAGAAGAGGGCACGGAAG
TAA
back to top