prot_Ecto-sp13_S_contig12409.1999.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12409.1999.1
Unique Nameprot_Ecto-sp13_S_contig12409.1999.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length303
Homology
BLAST of mRNA_Ecto-sp13_S_contig12409.1999.1 vs. uniprot
Match: D7G3R9_ECTSI (Helicase_C_4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3R9_ECTSI)

HSP 1 Score: 122 bits (306), Expect = 2.170e-27
Identity = 101/181 (55.80%), Postives = 111/181 (61.33%), Query Frame = 0
Query:   53 PSPTTSRASWASHPWEDDEHWDDYQKYLGHNSFFAEEEGGIGSDSVSGVDTDTDTEEEDIGSVFAEEDDEVFADEEEVCPSETLWRDWTMGPGEVXXXXXXXXXXTRTHPVKRGRARVRGTGGQRTTTKPNRKHRCPRXXXXXXXXXXXXXXXXXXXXXVGGRRRRLPTCF-RGGANSDVE 232
            PS   SRASWASHPW+DDEHWDDYQKYLGHNSFFAEE+                                     EEVC  ETLWR+WT GP   XXXXXXXXXX R HP + GR  VRG+GG+R  T+ N+KHR P XXXXXXXXXXXXXXX      VGGR RR  TCF RGGA  + +
Sbjct:  668 PSHIFSRASWASHPWDDDEHWDDYQKYLGHNSFFAEED-------------------------------------EEVCFRETLWREWTRGPXXXXXXXXXXXXXXRMHPRQHGR--VRGSGGRRKRTRKNKKHRFPXXXXXXXXXXXXXXXXLARRARVGGRHRRPRTCFLRGGARPEQD 809          
BLAST of mRNA_Ecto-sp13_S_contig12409.1999.1 vs. uniprot
Match: D7FZA9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA9_ECTSI)

HSP 1 Score: 87.0 bits (214), Expect = 2.120e-15
Identity = 96/195 (49.23%), Postives = 104/195 (53.33%), Query Frame = 0
Query:   41 RVGATTDPFPEPPSPTTSRASWASHPWEDDEHWDDYQKYLGHNSFFAEEEGGIGSDSVSGVDTDTDTEEEDIGSVFAEEDDEVFADEEEVCPSETLWRDWTMGPGEVXXXXXXXXXXTRTHPVKRGRARVRGTGGQRTTTKPNRKHRCPRXXXXXXXXXXXXXXXXXXXXXVGGRRRRLPTCFRGGANSDVEGDQ 235
            R   T D  PEP SPT+SRASWASHPW+DDE+W D Q YL HNSFFAEE                                        VC   ++W +WT GP   XXXXXXXXXX  T P KR   RVRG+GG+              XXXXXXXXXXXXXXXXXXXXX       LPT FRGG NS  EGDQ
Sbjct:  146 RGDVTPDLIPEPSSPTSSRASWASHPWDDDEYWGDDQIYLDHNSFFAEE----------------------------------------VCLFPSVWGEWTRGPEXXXXXXXXXXXXXXTQPRKR--CRVRGSGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPTSFRGGGNSGDEGDQ 298          
BLAST of mRNA_Ecto-sp13_S_contig12409.1999.1 vs. uniprot
Match: D7FZ65_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ65_ECTSI)

HSP 1 Score: 77.8 bits (190), Expect = 1.980e-12
Identity = 37/53 (69.81%), Postives = 41/53 (77.36%), Query Frame = 0
Query:   42 VGATT---DPFPEPPSPTTSRASWASHPWEDDEHWDDYQKYLGHNSFFAEEEG 91
            VG+ T   D    PPSPT+S+ASWASHPW+DDEHWDDYQKYL HN  F EEEG
Sbjct:   38 VGSDTKFFDSTTAPPSPTSSQASWASHPWDDDEHWDDYQKYLDHNCVFVEEEG 90          
BLAST of mRNA_Ecto-sp13_S_contig12409.1999.1 vs. uniprot
Match: D7FUC5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC5_ECTSI)

HSP 1 Score: 66.6 bits (161), Expect = 2.240e-10
Identity = 27/32 (84.38%), Postives = 30/32 (93.75%), Query Frame = 0
Query:   59 RASWASHPWEDDEHWDDYQKYLGHNSFFAEEE 90
            +ASWASHPW+DDEHWDDY+KYL HNSFF EEE
Sbjct:   56 KASWASHPWDDDEHWDDYKKYLDHNSFFTEEE 87          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12409.1999.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G3R9_ECTSI2.170e-2755.80Helicase_C_4 domain-containing protein n=1 Tax=Ect... [more]
D7FZA9_ECTSI2.120e-1549.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FZ65_ECTSI1.980e-1269.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FUC5_ECTSI2.240e-1084.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 190..210

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12409contigEcto-sp13_S_contig12409:3294..4493 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12409.1999.1mRNA_Ecto-sp13_S_contig12409.1999.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12409 2627..4948 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12409.1999.1 ID=prot_Ecto-sp13_S_contig12409.1999.1|Name=mRNA_Ecto-sp13_S_contig12409.1999.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=303bp
MTPSSPARRPRPRAPPRRAHQTPSRSTSSPTGATPSPTLLRVGATTDPFP
EPPSPTTSRASWASHPWEDDEHWDDYQKYLGHNSFFAEEEGGIGSDSVSG
VDTDTDTEEEDIGSVFAEEDDEVFADEEEVCPSETLWRDWTMGPGEVCLI
DSKWSEWTRTHPVKRGRARVRGTGGQRTTTKPNRKHRCPRRRQEQQRRRA
LRRKQLARRARVGGRRRRLPTCFRGGANSDVEGDQERGRRRRRWRRRWRS
RRRGRASPVGAPRGLDKRQYSGMNFGLHIWRLPNHTCIRRHEKWKKLPRA
LY*
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