prot_Ecto-sp13_S_contig8579.19987.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8579.19987.1
Unique Nameprot_Ecto-sp13_S_contig8579.19987.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length333
Homology
BLAST of mRNA_Ecto-sp13_S_contig8579.19987.1 vs. uniprot
Match: D7G257_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G257_ECTSI)

HSP 1 Score: 568 bits (1463), Expect = 3.090e-196
Identity = 323/332 (97.29%), Postives = 329/332 (99.10%), Query Frame = 0
Query:    1 MGHGGNIDIESTVVRSWDASKTLDHILKDSDDGTTNRSFISCVSEVVVDADETCDGTAQNDMGECRMDIIDSTVAYFGYDETESYGITWKVRGLCDDLSNKDTLFDSVRVYGDIKNSDIYGMWYGHYSYGHLGGVWTNNLMHDNHVYGFDPHDDSDYLTISGNTCYNNGNHGIIASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLVETSYCVVSDNEFTDNRWGFRVILGSTGNVLDSNILTENTYSDIYSYYGADEEVPEVEPFTGINTDNTYRFLNSDNTHVVDNTGDAASGESDDITNSCFTAESNRTPVC 332
            MGHGGNIDI+STVVRSWDASKTLDHILKDSDDGTTNRSFI+CVSEVVVDADETCDGTAQNDMGECRMDI+DSTVAYFGYDETESYGITWKVRGLCDDLSNKDTLFDSVRVYGD+KNSDIYGMWYGHYSYGHLGGVWT+NLMHDNHVYGFDPHDDSDYLTISGNTCYNNGNHGIIAS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLVETS CVVSDNEFTDNRWGFR+ILGSTGNVLDSNILTENTYSDIYSYYGADEEVPEVEPFTGINTDNTYRFLNSDNTHVVDNTGDAASGE DDITNSCFTAESNRTPVC
Sbjct:  454 MGHGGNIDIDSTVVRSWDASKTLDHILKDSDDGTTNRSFIACVSEVVVDADETCDGTAQNDMGECRMDIVDSTVAYFGYDETESYGITWKVRGLCDDLSNKDTLFDSVRVYGDMKNSDIYGMWYGHYSYGHLGGVWTDNLMHDNHVYGFDPHDDSDYLTISGNTCYNNGNHGIIASKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLVETSNCVVSDNEFTDNRWGFRIILGSTGNVLDSNILTENTYSDIYSYYGADEEVPEVEPFTGINTDNTYRFLNSDNTHVVDNTGDAASGELDDITNSCFTAESNRTPVC 785          
BLAST of mRNA_Ecto-sp13_S_contig8579.19987.1 vs. uniprot
Match: A0A6H5J745_9PHAE (MEP21 protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J745_9PHAE)

HSP 1 Score: 288 bits (736), Expect = 8.360e-85
Identity = 188/296 (63.51%), Postives = 228/296 (77.03%), Query Frame = 0
Query:    2 GHGGNIDIESTVVRSWDASKTLDHILKDSDD-GTTNRSFISCVSEVVVDADETCDGTAQNDMGECRMDIIDSTVAYFGYDETESYGITWKVRGLCDDLSNKDTLFDSVRVYGDIKNSDIYGMWYGHYSYGHLGGVWTNNLMHDNHVYGFDPHDDSDYLTISGNTCYNNGNHGIIASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLVETSYCVVSDNEFTDNRWGFRVILGSTGNVL--DSNILTENTYSDIYSYYGADEEVPEVEPFTGINTDNTYRF 294
            G GG++    T V SW       H+L D  + G   RS+I C+SE++ +  +TCDG A+ + GECRMD+I+S ++Y GY+ TESYG++WKVRGLCDDLSNKDTLF+SVRVYGDIKNSDIYG+WYGHYSYGHLGGVWTNN MHDNHVYGFDPHDDSDYLTI+GNTCYN         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SLVETS+ +V++N   DN++G R+++GS  N +   +N ++ N   D+Y Y G+  +V EV P+TGIN  N +R 
Sbjct:  544 GAGGHLYFYQTEVTSWVEEDLAPHMLPDDAEWGAEPRSYIGCLSEILEEG-QTCDGVAKKERGECRMDVIESIISYLGYEATESYGLSWKVRGLCDDLSNKDTLFESVRVYGDIKNSDIYGLWYGHYSYGHLGGVWTNNFMHDNHVYGFDPHDDSDYLTITGNTCYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSLVETSHTLVTENTLNDNKYGVRLVVGSNDNTVRVTTNSVSSNRQHDLYLYIGSSSDVAEVAPYTGINERNFFRL 838          
BLAST of mRNA_Ecto-sp13_S_contig8579.19987.1 vs. uniprot
Match: D7G261_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G261_ECTSI)

HSP 1 Score: 257 bits (656), Expect = 2.570e-76
Identity = 188/366 (51.37%), Postives = 233/366 (63.66%), Query Frame = 0
Query:    2 GHGGNIDIESTVVRSWDASKTLDHILKDSDD-GTTNRSFISCVSEVVVDADETCDGTAQNDMGECRMDIIDSTVAYFGYDETESYGITWKVRGLCDDLSNKDTLFDSVRVYGDIKNSDIYGMWYGHYSYGHLGGVWTNNLMHDNHVYGFDPHDDSDYLTISGNTCYNNGNHGIIASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLVETSYCVVSDNEFTDNRWGFRVILGSTGNVLDSNILTENTYSDIYSYYGADEEVPEVEPFTGINTDN----------------------------------TYRFLNSDNTHVVDNTGDAASGESDDITNSCFTAESNRTPVC 332
            G GG++    T V SW       H L D  + G   RS+I C+SE++ +  +TCDG A+ + GECRMD+I+S ++Y GY+ TESYG++WKVRGLC DLSN+DTLFDSVRVYGD+++SDIYG+WYGHYSYGHLGG+WTNN MHDNHVYGFDPHDDSDYLTI+GNTCYNNG       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    TS+ +V++N   DN++G R+++                            +V +VEP+TGIN  N                                   + F  SD T + +N G AA   +  + +SCFTA+S  +P C
Sbjct:  348 GAGGHLYFYQTEVTSWVEEDLAPHTLPDDAEWGAEPRSYIGCLSEILEEG-QTCDGVAKKERGECRMDVIESIISYLGYEATESYGLSWKVRGLCTDLSNQDTLFDSVRVYGDLQDSDIYGLWYGHYSYGHLGGMWTNNFMHDNHVYGFDPHDDSDYLTITGNTCYNNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSHTLVTENTLNDNKYGIRLLVXXXXXXXXXXXXXXXXXXXXXXXXXXSSDVADVEPYTGINERNFLSENNVMGTANFPVSVADSSETTLSDNFFLGSGAFSFTRSDETRLWNNEGGAADS-TPYVEDSCFTADSGVSPEC 711          
BLAST of mRNA_Ecto-sp13_S_contig8579.19987.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI)

HSP 1 Score: 234 bits (598), Expect = 2.410e-70
Identity = 130/276 (47.10%), Postives = 159/276 (57.61%), Query Frame = 0
Query:    2 GHGGNIDIESTVVRSWDASKTLDHILKDSDDGTTNRSFISCVSEVVVDADETCDGTAQNDMGECRMDIIDSTVAYFGYDETESYGITWKVRGLCDDLSNKDTLFDSVRVYGDIKNSDIYGMWYGHYSYGHLGGVWTNNLMHDNHVYGFDPHDDSDYLTISGNTCYNNGNHGIIASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--SLVETSYCVVSDNEFTDNRWGFRVILGSTGNVLDSNILTENTYSDIYSYYGADE 275
            GHGGN+  E T+V SWD         K  +     RSFI CVSEV+   ++TC   A N+MGECRMDIIDS + Y GYD +E+YGITWKVRG C DLSN D +FD V VYGD+K SDI+ M+YG YS+GH GGVWTNNLMHDNH YGFDPHDDSDYL I+GN  YNN NHGIIAS                                               +++ETS C + DN+     +G RV LGS+ N +  N+        +++Y G+DE
Sbjct:   96 GHGGNLYFEDTIVTSWDVDGR-----KPQETYKDGRSFIRCVSEVLT-GEDTC---AINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPD-VFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDE 361          
BLAST of mRNA_Ecto-sp13_S_contig8579.19987.1 vs. uniprot
Match: D7FWW1_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWW1_ECTSI)

HSP 1 Score: 231 bits (590), Expect = 1.590e-68
Identity = 112/176 (63.64%), Postives = 136/176 (77.27%), Query Frame = 0
Query:    2 GHGGNIDIESTVVRSWDASKTLDHILKDSDDGTTNRSFISCVSEVVVDADETCD-GTAQNDMGECRMDIIDSTVAYFGYDETESYGITWKVRGLCDDLSNKDTLFDSVRVYGDIKNSDIYGMWYGHYSYGHLGGVWTNNLMHDNHVYGFDPHDDSDYLTISGNTCYNNGNHGIIAS 176
            GHGGN+DI  T+++SWD +    HIL D   G   RS+I+C SEVV + D TCD G A+ D GECRMD++DS + + GY  +ESYGITWKVRG C+D+SN + +FD+V VYGDI N DI+ MWYG YSYGH GGVWT++LMHDN+VYGFDPHDDSDYLTI  NT +NN NHGIIAS
Sbjct:  170 GHGGNLDIYKTLIQSWDENLLTAHILADDSTGDEPRSYIACTSEVVNEND-TCDSGYAREDKGECRMDMVDSELGHMGYFASESYGITWKVRGFCEDMSNPE-VFDNVNVYGDITNCDIHHMWYGMYSYGHQGGVWTDSLMHDNYVYGFDPHDDSDYLTIRNNTVWNNKNHGIIAS 343          
BLAST of mRNA_Ecto-sp13_S_contig8579.19987.1 vs. uniprot
Match: A0A6H5JNF4_9PHAE (MEP16 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF4_9PHAE)

HSP 1 Score: 223 bits (568), Expect = 1.000e-65
Identity = 111/179 (62.01%), Postives = 135/179 (75.42%), Query Frame = 0
Query:    2 GHGGNIDIESTVVRSWDASKTLDHILKDSDDGTTNRSFISCVSEVVVDADETCD-GTAQNDMGECRMDIIDSTVAYFGYDETESYGITWKVRGLCDDLSNKDTLFDSVRVYGDIKNSDIYGMWYGHYSYGHLGGVWTNNLMH---DNHVYGFDPHDDSDYLTISGNTCYNNGNHGIIAS 176
            GHGGN+DI  T+++SWD +    HIL D   G   RS+I+C SEVV + D TCD G A+ D GECRMD++DS + + GY  +ESYGITWKVRG C+D+SN + +FD+V VYGDI N DI+ MWYG YSYGH GGVWT++LMH   DN+VYGFDPHDDSDYLTI  NT +NN  HGIIAS
Sbjct:  235 GHGGNLDIYKTLIQSWDENLLTAHILADDSTGDEPRSYIACSSEVVNEND-TCDSGYAREDKGECRMDMVDSELGHMGYFASESYGITWKVRGFCEDMSNPE-VFDNVNVYGDITNCDIHHMWYGMYSYGHQGGVWTDSLMHGEDDNYVYGFDPHDDSDYLTIRNNTVWNNKKHGIIAS 411          
BLAST of mRNA_Ecto-sp13_S_contig8579.19987.1 vs. uniprot
Match: A8CEP1_SACJA (Mannuronan C-5 epimerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A8CEP1_SACJA)

HSP 1 Score: 216 bits (551), Expect = 8.140e-63
Identity = 131/274 (47.81%), Postives = 169/274 (61.68%), Query Frame = 0
Query:    3 HGGNIDIESTVVRSWDASKTLDHILKDSDDGTTNRSFISCVSEVVVDADETCDGTAQNDMGECRMDIIDSTVAYFGYDETESYGITWKVRGLCDDLSNKDTLFDSVRVYGDIKNSDIYGMWYGHYSYGHLGGVWTNNLMHDNHVYGFDPHDDSDYLTISGNTCYNNGNHGIIASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--SLVETSYCVVSDNEFTDNRWGFRVILGSTGNVLDSNILTENTYSDIYSYYGAD 274
            HGG++D  ST V +WD SK      K   D +  RS+IS VSEV+ D+ + CDG A+ +MGE RMDI DS +AY GY  +ESYG+TWKVRGLC DLSN + +FD+V VYG+I +SDI+  ++G Y+YGH  G W  N MH N  YGFDPHDDSD+LTI  N  YNNGNHGIIAS     XXXXXXXXXX                                +L+ET    VS+N+F DN++G R+ +G   NV   N +T ++  ++Y+Y G+D
Sbjct:  143 HGGSLDFVSTKVFAWDTSKN-----KVRTDDSKGRSYISAVSEVITDSKQKCDGRAKKNMGEARMDIEDSEMAYLGYFGSESYGLTWKVRGLCRDLSNLE-VFDAVNVYGNIYDSDIHHNYFGVYTYGHEQGDWRRNKMHHNTEYGFDPHDDSDFLTIHDNEVYNNGNHGIIASKRCNGXXXXXXXXXXGAAKSVGIFLHRSSDDAIVKDNYVHDNGDAGMALMETFNADVSNNKFEDNKYGIRMSVGCADNVFSKNDITGSSKYNVYTYQGSD 410          
BLAST of mRNA_Ecto-sp13_S_contig8579.19987.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI)

HSP 1 Score: 216 bits (550), Expect = 1.400e-62
Identity = 127/318 (39.94%), Postives = 167/318 (52.52%), Query Frame = 0
Query:    3 HGGNIDIESTVVRSWDASKTLDHILKDSDDGTTNRSFISCVSEVVVDADETCDGTAQNDMGECRMDIIDSTVAYFGYDETESYGITWKVRGLCDDLSNKDTLFDSVRVYGDIKNSDIYGMWYGHYSYGHLGGVWTNNLMHDNHVYGFDPHDDSDYLTISGNTCYNNGNHGIIASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSL--VETSYCVVSDNEFTDNRWGFRVILGSTGNVLDSNILTENTYSDIYSYYGADEEVPEV-------------EPFTGINTDNTYRFLNSDNTHVVDN 305
            HGG++D  ST V SWD S          +D T  RS+IS +SE++ D DETC+G A+N MGE RMDI  S + Y GY ++ESYG+TWKVRG C+D SN + +FD V VYG++ +SDI+ M +G Y+YGH  G W  N MHDN  YGFDPHDDSD+LTI  N  YNNG HGIIAS                                              L  +E+    VS+N F +N++G R  +G   NV  +N ++ N   + YSY G DE  P+V               F+G   + T +   +D T  +DN
Sbjct:  146 HGGSLDFVSTKVFSWDTSTN-----SPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPE-VFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDE--PDVVSSGRSQNNVFSQNSFSG--AEETIKIKEADGTQFLDN 453          
BLAST of mRNA_Ecto-sp13_S_contig8579.19987.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI)

HSP 1 Score: 215 bits (548), Expect = 3.020e-62
Identity = 126/318 (39.62%), Postives = 169/318 (53.14%), Query Frame = 0
Query:    3 HGGNIDIESTVVRSWDASKTLDHILKDSDDGTTNRSFISCVSEVVVDADETCDGTAQNDMGECRMDIIDSTVAYFGYDETESYGITWKVRGLCDDLSNKDTLFDSVRVYGDIKNSDIYGMWYGHYSYGHLGGVWTNNLMHDNHVYGFDPHDDSDYLTISGNTCYNNGNHGIIASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSL--VETSYCVVSDNEFTDNRWGFRVILGSTGNVLDSNILTENTYSDIYSYYGADEEVPEV-------------EPFTGINTDNTYRFLNSDNTHVVDN 305
            HGG++D   T V SWD S          +D T  RS+IS VSE+V D DETC+G A+N MGE RMDI +S + Y G+ ++ESYG+TWKVRG C D SN + +FD V VYG++ +SDI+ + +G Y+YGH  G W  N MHDN  YGFDPHDDSD+LTI  N  YNNG HGIIAS                                              L  +E+    VS+N F +N++G R+ +G   NV   NI++ N+  + Y+Y G+DE  P+V               F+G   + T +   +D T  +DN
Sbjct:  150 HGGSLDFVGTKVFSWDTSTN-----SPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPE-IFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDE--PDVVSSGRSQNNVFSQNSFSG--AEETIKIKEADGTQFLDN 457          
BLAST of mRNA_Ecto-sp13_S_contig8579.19987.1 vs. uniprot
Match: Q7XAJ7_9PHAE (Mannuronan C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE)

HSP 1 Score: 210 bits (535), Expect = 1.860e-60
Identity = 146/318 (45.91%), Postives = 191/318 (60.06%), Query Frame = 0
Query:    3 HGGNIDIESTVVRSWDASKTLDHILKDSDDGTTNRSFISCVSEVVVDADETCDGTAQNDMGECRMDIIDSTVAYFGYDETESYGITWKVRGLCDDLSNKDTLFDSVRVYGDIKNSDIYGMWYGHYSYGHLGGVWTNNLMHDNHVYGFDPHDDSDYLTISGNTCYNNGNHGIIASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSL--VETSYCVVSDNEFTDNRWGFRVILGSTGNVLDSNILTENTYSDIYSYYGADEEVPEVEPFTGINTDNTY------------RFLNSDNTHVVDNT 306
            HGG++D  ST V +WD S  ++   +D +DG   RS++S VSEV+ D  +TC+G A+N+MGE RMDI DS + Y GY  +ESYG+TWKVRG C D SN D LF+ V VYG+I +SDI+   +G Y+YGH  G W  N MHDN  YGFDPHDDSD+LTI  N  Y+NG HGIIAS                           XXXXXXXXXXXXXXXX   L  +E+    VSDN F +N++G R  +GS  NV  +N+++ +T    YSY G+D   P+V   +G + DN +            + L++D T  +DNT
Sbjct:  143 HGGSLDFLSTKVFAWDTS--INGPDRDEEDG---RSYVSAVSEVITDDSQTCNGRAKNNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHD-LFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYDNGYHGIIASKRCNGVSIQGNEVYGGATSSAGIFLHRXXXXXXXXXXXXXXXXDAGLAMMESFNADVSDNIFENNKYGIRFSVGSGRNVFFNNVISGSTRYSTYSYLGSD--APDVVD-SGRSQDNVFQENNIIGGVESIKLLDADGTQFIDNT 451          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8579.19987.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G257_ECTSI3.090e-19697.29Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
A0A6H5J745_9PHAE8.360e-8563.51MEP21 protein (Fragment) n=1 Tax=Ectocarpus sp. CC... [more]
D7G261_ECTSI2.570e-7651.37Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7FRR8_ECTSI2.410e-7047.10Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7FWW1_ECTSI1.590e-6863.64Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5JNF4_9PHAE1.000e-6562.01MEP16 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
A8CEP1_SACJA8.140e-6347.81Mannuronan C-5 epimerase n=1 Tax=Saccharina japoni... [more]
D7G339_ECTSI1.400e-6239.94Mannuronan C-5-epimerase n=2 Tax=Ectocarpus silicu... [more]
D7FXE4_ECTSI3.020e-6239.62Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
Q7XAJ7_9PHAE1.860e-6045.91Mannuronan C-5-epimerase n=1 Tax=Laminaria digitat... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006626Parallel beta-helix repeatSMARTSM00710pbh1coord: 155..177
e-value: 2.4
score: 17.1
coord: 109..139
e-value: 6800.0
score: 1.3
coord: 203..225
e-value: 9.7
score: 15.1
coord: 179..201
e-value: 9.1
score: 15.2
coord: 226..247
e-value: 350.0
score: 10.0
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 1..319
e-value: 8.4E-74
score: 250.8
IPR039448Right handed beta helix domainPFAMPF13229Beta_helixcoord: 113..257
e-value: 1.2E-17
score: 64.2
IPR022441Parallel beta-helix repeat-2TIGRFAMTIGR03804TIGR03804coord: 184..217
e-value: 2.3E-5
score: 22.0
coord: 220..264
e-value: 3.5E-6
score: 24.6
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 114..313

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8579contigEcto-sp13_S_contig8579:21..4878 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8579.19987.1mRNA_Ecto-sp13_S_contig8579.19987.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8579 3..4878 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8579.19987.1 ID=prot_Ecto-sp13_S_contig8579.19987.1|Name=mRNA_Ecto-sp13_S_contig8579.19987.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=333bp
MGHGGNIDIESTVVRSWDASKTLDHILKDSDDGTTNRSFISCVSEVVVDA
DETCDGTAQNDMGECRMDIIDSTVAYFGYDETESYGITWKVRGLCDDLSN
KDTLFDSVRVYGDIKNSDIYGMWYGHYSYGHLGGVWTNNLMHDNHVYGFD
PHDDSDYLTISGNTCYNNGNHGIIASKRCDHLLVEDNESYDNGGSGIMLH
KSCDDSIVRGNTVYSNGDAGLSLVETSYCVVSDNEFTDNRWGFRVILGST
GNVLDSNILTENTYSDIYSYYGADEEVPEVEPFTGINTDNTYRFLNSDNT
HVVDNTGDAASGESDDITNSCFTAESNRTPVC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006626PbH1
IPR012334Pectin_lyas_fold
IPR039448Beta_helix
IPR022441Para_beta_helix_rpt-2
IPR011050Pectin_lyase_fold/virulence