mRNA_Ecto-sp13_S_contig8579.19987.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig8579.19987.1
Unique NamemRNA_Ecto-sp13_S_contig8579.19987.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig8579.19987.1 vs. uniprot
Match: D7G257_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G257_ECTSI)

HSP 1 Score: 582 bits (1499), Expect = 1.410e-201
Identity = 329/338 (97.34%), Postives = 335/338 (99.11%), Query Frame = 1
Query:    1 KAWNRIMGHGGNIDIESTVVRSWDASKTLDHILKDSDDGTTNRSFISCVSEVVVDADETCDGTAQNDMGECRMDIIDSTVAYFGYDETESYGITWKVRGLCDDLSNKDTLFDSVRVYGDIKNSDIYGMWYGHYSYGHLGGVWTNNLMHDNHVYGFDPHDDSDYLTISGNTCYNNGNHGIIASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLVETSYCVVSDNEFTDNRWGFRVILGSTGNVLDSNILTENTYSDIYSYYGADEEVPEVEPFTGINTDNTYRFLNSDNTHVVDNTGDAASGESDDITNSCFTAESNRTPVC 1014
            KAWNRIMGHGGNIDI+STVVRSWDASKTLDHILKDSDDGTTNRSFI+CVSEVVVDADETCDGTAQNDMGECRMDI+DSTVAYFGYDETESYGITWKVRGLCDDLSNKDTLFDSVRVYGD+KNSDIYGMWYGHYSYGHLGGVWT+NLMHDNHVYGFDPHDDSDYLTISGNTCYNNGNHGIIAS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLVETS CVVSDNEFTDNRWGFR+ILGSTGNVLDSNILTENTYSDIYSYYGADEEVPEVEPFTGINTDNTYRFLNSDNTHVVDNTGDAASGE DDITNSCFTAESNRTPVC
Sbjct:  448 KAWNRIMGHGGNIDIDSTVVRSWDASKTLDHILKDSDDGTTNRSFIACVSEVVVDADETCDGTAQNDMGECRMDIVDSTVAYFGYDETESYGITWKVRGLCDDLSNKDTLFDSVRVYGDMKNSDIYGMWYGHYSYGHLGGVWTDNLMHDNHVYGFDPHDDSDYLTISGNTCYNNGNHGIIASKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLVETSNCVVSDNEFTDNRWGFRIILGSTGNVLDSNILTENTYSDIYSYYGADEEVPEVEPFTGINTDNTYRFLNSDNTHVVDNTGDAASGELDDITNSCFTAESNRTPVC 785          
BLAST of mRNA_Ecto-sp13_S_contig8579.19987.1 vs. uniprot
Match: A0A6H5J745_9PHAE (MEP21 protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J745_9PHAE)

HSP 1 Score: 291 bits (746), Expect = 4.170e-86
Identity = 190/299 (63.55%), Postives = 230/299 (76.92%), Query Frame = 1
Query:   13 RIMGHGGNIDIESTVVRSWDASKTLDHILKDSDD-GTTNRSFISCVSEVVVDADETCDGTAQNDMGECRMDIIDSTVAYFGYDETESYGITWKVRGLCDDLSNKDTLFDSVRVYGDIKNSDIYGMWYGHYSYGHLGGVWTNNLMHDNHVYGFDPHDDSDYLTISGNTCYNNGNHGIIASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLVETSYCVVSDNEFTDNRWGFRVILGSTGNVL--DSNILTENTYSDIYSYYGADEEVPEVEPFTGINTDNTYRF 900
            RI G GG++    T V SW       H+L D  + G   RS+I C+SE++ +  +TCDG A+ + GECRMD+I+S ++Y GY+ TESYG++WKVRGLCDDLSNKDTLF+SVRVYGDIKNSDIYG+WYGHYSYGHLGGVWTNN MHDNHVYGFDPHDDSDYLTI+GNTCYN         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SLVETS+ +V++N   DN++G R+++GS  N +   +N ++ N   D+Y Y G+  +V EV P+TGIN  N +R 
Sbjct:  541 RIRGAGGHLYFYQTEVTSWVEEDLAPHMLPDDAEWGAEPRSYIGCLSEILEEG-QTCDGVAKKERGECRMDVIESIISYLGYEATESYGLSWKVRGLCDDLSNKDTLFESVRVYGDIKNSDIYGLWYGHYSYGHLGGVWTNNFMHDNHVYGFDPHDDSDYLTITGNTCYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSLVETSHTLVTENTLNDNKYGVRLVVGSNDNTVRVTTNSVSSNRQHDLYLYIGSSSDVAEVAPYTGINERNFFRL 838          
BLAST of mRNA_Ecto-sp13_S_contig8579.19987.1 vs. uniprot
Match: D7G261_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G261_ECTSI)

HSP 1 Score: 261 bits (666), Expect = 1.080e-77
Identity = 190/369 (51.49%), Postives = 235/369 (63.69%), Query Frame = 1
Query:   13 RIMGHGGNIDIESTVVRSWDASKTLDHILKDSDD-GTTNRSFISCVSEVVVDADETCDGTAQNDMGECRMDIIDSTVAYFGYDETESYGITWKVRGLCDDLSNKDTLFDSVRVYGDIKNSDIYGMWYGHYSYGHLGGVWTNNLMHDNHVYGFDPHDDSDYLTISGNTCYNNGNHGIIASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLVETSYCVVSDNEFTDNRWGFRVILGSTGNVLDSNILTENTYSDIYSYYGADEEVPEVEPFTGINTDN----------------------------------TYRFLNSDNTHVVDNTGDAASGESDDITNSCFTAESNRTPVC 1014
            RI G GG++    T V SW       H L D  + G   RS+I C+SE++ +  +TCDG A+ + GECRMD+I+S ++Y GY+ TESYG++WKVRGLC DLSN+DTLFDSVRVYGD+++SDIYG+WYGHYSYGHLGG+WTNN MHDNHVYGFDPHDDSDYLTI+GNTCYNNG       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    TS+ +V++N   DN++G R+++                            +V +VEP+TGIN  N                                   + F  SD T + +N G AA   +  + +SCFTA+S  +P C
Sbjct:  345 RIRGAGGHLYFYQTEVTSWVEEDLAPHTLPDDAEWGAEPRSYIGCLSEILEEG-QTCDGVAKKERGECRMDVIESIISYLGYEATESYGLSWKVRGLCTDLSNQDTLFDSVRVYGDLQDSDIYGLWYGHYSYGHLGGMWTNNFMHDNHVYGFDPHDDSDYLTITGNTCYNNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSHTLVTENTLNDNKYGIRLLVXXXXXXXXXXXXXXXXXXXXXXXXXXSSDVADVEPYTGINERNFLSENNVMGTANFPVSVADSSETTLSDNFFLGSGAFSFTRSDETRLWNNEGGAADS-TPYVEDSCFTADSGVSPEC 711          
BLAST of mRNA_Ecto-sp13_S_contig8579.19987.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI)

HSP 1 Score: 236 bits (603), Expect = 5.280e-71
Identity = 131/278 (47.12%), Postives = 160/278 (57.55%), Query Frame = 1
Query:   16 IMGHGGNIDIESTVVRSWDASKTLDHILKDSDDGTTNRSFISCVSEVVVDADETCDGTAQNDMGECRMDIIDSTVAYFGYDETESYGITWKVRGLCDDLSNKDTLFDSVRVYGDIKNSDIYGMWYGHYSYGHLGGVWTNNLMHDNHVYGFDPHDDSDYLTISGNTCYNNGNHGIIASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--SLVETSYCVVSDNEFTDNRWGFRVILGSTGNVLDSNILTENTYSDIYSYYGADE 843
            I GHGGN+  E T+V SWD         K  +     RSFI CVSEV+   ++TC   A N+MGECRMDIIDS + Y GYD +E+YGITWKVRG C DLSN D +FD V VYGD+K SDI+ M+YG YS+GH GGVWTNNLMHDNH YGFDPHDDSDYL I+GN  YNN NHGIIAS                                               +++ETS C + DN+     +G RV LGS+ N +  N+        +++Y G+DE
Sbjct:   94 IRGHGGNLYFEDTIVTSWDVDGR-----KPQETYKDGRSFIRCVSEVLT-GEDTC---AINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPD-VFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDE 361          
BLAST of mRNA_Ecto-sp13_S_contig8579.19987.1 vs. uniprot
Match: D7FWW1_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWW1_ECTSI)

HSP 1 Score: 233 bits (594), Expect = 4.950e-69
Identity = 112/178 (62.92%), Postives = 137/178 (76.97%), Query Frame = 1
Query:   16 IMGHGGNIDIESTVVRSWDASKTLDHILKDSDDGTTNRSFISCVSEVVVDADETCD-GTAQNDMGECRMDIIDSTVAYFGYDETESYGITWKVRGLCDDLSNKDTLFDSVRVYGDIKNSDIYGMWYGHYSYGHLGGVWTNNLMHDNHVYGFDPHDDSDYLTISGNTCYNNGNHGIIAS 546
            + GHGGN+DI  T+++SWD +    HIL D   G   RS+I+C SEVV + D TCD G A+ D GECRMD++DS + + GY  +ESYGITWKVRG C+D+SN + +FD+V VYGDI N DI+ MWYG YSYGH GGVWT++LMHDN+VYGFDPHDDSDYLTI  NT +NN NHGIIAS
Sbjct:  168 VRGHGGNLDIYKTLIQSWDENLLTAHILADDSTGDEPRSYIACTSEVVNEND-TCDSGYAREDKGECRMDMVDSELGHMGYFASESYGITWKVRGFCEDMSNPE-VFDNVNVYGDITNCDIHHMWYGMYSYGHQGGVWTDSLMHDNYVYGFDPHDDSDYLTIRNNTVWNNKNHGIIAS 343          
BLAST of mRNA_Ecto-sp13_S_contig8579.19987.1 vs. uniprot
Match: A0A6H5JNF4_9PHAE (MEP16 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF4_9PHAE)

HSP 1 Score: 224 bits (572), Expect = 3.090e-66
Identity = 111/181 (61.33%), Postives = 136/181 (75.14%), Query Frame = 1
Query:   16 IMGHGGNIDIESTVVRSWDASKTLDHILKDSDDGTTNRSFISCVSEVVVDADETCD-GTAQNDMGECRMDIIDSTVAYFGYDETESYGITWKVRGLCDDLSNKDTLFDSVRVYGDIKNSDIYGMWYGHYSYGHLGGVWTNNLMH---DNHVYGFDPHDDSDYLTISGNTCYNNGNHGIIAS 546
            + GHGGN+DI  T+++SWD +    HIL D   G   RS+I+C SEVV + D TCD G A+ D GECRMD++DS + + GY  +ESYGITWKVRG C+D+SN + +FD+V VYGDI N DI+ MWYG YSYGH GGVWT++LMH   DN+VYGFDPHDDSDYLTI  NT +NN  HGIIAS
Sbjct:  233 VRGHGGNLDIYKTLIQSWDENLLTAHILADDSTGDEPRSYIACSSEVVNEND-TCDSGYAREDKGECRMDMVDSELGHMGYFASESYGITWKVRGFCEDMSNPE-VFDNVNVYGDITNCDIHHMWYGMYSYGHQGGVWTDSLMHGEDDNYVYGFDPHDDSDYLTIRNNTVWNNKKHGIIAS 411          
BLAST of mRNA_Ecto-sp13_S_contig8579.19987.1 vs. uniprot
Match: A8CEP1_SACJA (Mannuronan C-5 epimerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A8CEP1_SACJA)

HSP 1 Score: 218 bits (554), Expect = 3.550e-63
Identity = 132/282 (46.81%), Postives = 172/282 (60.99%), Query Frame = 1
Query:    1 KAWNRIMGHGGNIDIESTVVRSWDASKTLDHILKDSDDGTTNRSFISCVSEVVVDADETCDGTAQNDMGECRMDIIDSTVAYFGYDETESYGITWKVRGLCDDLSNKDTLFDSVRVYGDIKNSDIYGMWYGHYSYGHLGGVWTNNLMHDNHVYGFDPHDDSDYLTISGNTCYNNGNHGIIASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--SLVETSYCVVSDNEFTDNRWGFRVILGSTGNVLDSNILTENTYSDIYSYYGAD 840
            K +  +  HGG++D  ST V +WD SK      K   D +  RS+IS VSEV+ D+ + CDG A+ +MGE RMDI DS +AY GY  +ESYG+TWKVRGLC DLSN + +FD+V VYG+I +SDI+  ++G Y+YGH  G W  N MH N  YGFDPHDDSD+LTI  N  YNNGNHGIIAS     XXXXXXXXXX                                +L+ET    VS+N+F DN++G R+ +G   NV   N +T ++  ++Y+Y G+D
Sbjct:  135 KDFINLRAHGGSLDFVSTKVFAWDTSKN-----KVRTDDSKGRSYISAVSEVITDSKQKCDGRAKKNMGEARMDIEDSEMAYLGYFGSESYGLTWKVRGLCRDLSNLE-VFDAVNVYGNIYDSDIHHNYFGVYTYGHEQGDWRRNKMHHNTEYGFDPHDDSDFLTIHDNEVYNNGNHGIIASKRCNGXXXXXXXXXXGAAKSVGIFLHRSSDDAIVKDNYVHDNGDAGMALMETFNADVSNNKFEDNKYGIRMSVGCADNVFSKNDITGSSKYNVYTYQGSD 410          
BLAST of mRNA_Ecto-sp13_S_contig8579.19987.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI)

HSP 1 Score: 217 bits (552), Expect = 8.600e-63
Identity = 127/321 (39.56%), Postives = 168/321 (52.34%), Query Frame = 1
Query:   16 IMGHGGNIDIESTVVRSWDASKTLDHILKDSDDGTTNRSFISCVSEVVVDADETCDGTAQNDMGECRMDIIDSTVAYFGYDETESYGITWKVRGLCDDLSNKDTLFDSVRVYGDIKNSDIYGMWYGHYSYGHLGGVWTNNLMHDNHVYGFDPHDDSDYLTISGNTCYNNGNHGIIASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSL--VETSYCVVSDNEFTDNRWGFRVILGSTGNVLDSNILTENTYSDIYSYYGADEEVPEV-------------EPFTGINTDNTYRFLNSDNTHVVDN 933
            +  HGG++D  ST V SWD S          +D T  RS+IS +SE++ D DETC+G A+N MGE RMDI  S + Y GY ++ESYG+TWKVRG C+D SN + +FD V VYG++ +SDI+ M +G Y+YGH  G W  N MHDN  YGFDPHDDSD+LTI  N  YNNG HGIIAS                                              L  +E+    VS+N F +N++G R  +G   NV  +N ++ N   + YSY G DE  P+V               F+G   + T +   +D T  +DN
Sbjct:  143 LRAHGGSLDFVSTKVFSWDTSTN-----SPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPE-VFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDE--PDVVSSGRSQNNVFSQNSFSG--AEETIKIKEADGTQFLDN 453          
BLAST of mRNA_Ecto-sp13_S_contig8579.19987.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI)

HSP 1 Score: 216 bits (550), Expect = 1.850e-62
Identity = 126/321 (39.25%), Postives = 170/321 (52.96%), Query Frame = 1
Query:   16 IMGHGGNIDIESTVVRSWDASKTLDHILKDSDDGTTNRSFISCVSEVVVDADETCDGTAQNDMGECRMDIIDSTVAYFGYDETESYGITWKVRGLCDDLSNKDTLFDSVRVYGDIKNSDIYGMWYGHYSYGHLGGVWTNNLMHDNHVYGFDPHDDSDYLTISGNTCYNNGNHGIIASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSL--VETSYCVVSDNEFTDNRWGFRVILGSTGNVLDSNILTENTYSDIYSYYGADEEVPEV-------------EPFTGINTDNTYRFLNSDNTHVVDN 933
            +  HGG++D   T V SWD S          +D T  RS+IS VSE+V D DETC+G A+N MGE RMDI +S + Y G+ ++ESYG+TWKVRG C D SN + +FD V VYG++ +SDI+ + +G Y+YGH  G W  N MHDN  YGFDPHDDSD+LTI  N  YNNG HGIIAS                                              L  +E+    VS+N F +N++G R+ +G   NV   NI++ N+  + Y+Y G+DE  P+V               F+G   + T +   +D T  +DN
Sbjct:  147 LRAHGGSLDFVGTKVFSWDTSTN-----SPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPE-IFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDE--PDVVSSGRSQNNVFSQNSFSG--AEETIKIKEADGTQFLDN 457          
BLAST of mRNA_Ecto-sp13_S_contig8579.19987.1 vs. uniprot
Match: Q7XAJ7_9PHAE (Mannuronan C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE)

HSP 1 Score: 211 bits (537), Expect = 1.140e-60
Identity = 146/321 (45.48%), Postives = 192/321 (59.81%), Query Frame = 1
Query:   16 IMGHGGNIDIESTVVRSWDASKTLDHILKDSDDGTTNRSFISCVSEVVVDADETCDGTAQNDMGECRMDIIDSTVAYFGYDETESYGITWKVRGLCDDLSNKDTLFDSVRVYGDIKNSDIYGMWYGHYSYGHLGGVWTNNLMHDNHVYGFDPHDDSDYLTISGNTCYNNGNHGIIASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSL--VETSYCVVSDNEFTDNRWGFRVILGSTGNVLDSNILTENTYSDIYSYYGADEEVPEVEPFTGINTDNTY------------RFLNSDNTHVVDNT 936
            +  HGG++D  ST V +WD S  ++   +D +DG   RS++S VSEV+ D  +TC+G A+N+MGE RMDI DS + Y GY  +ESYG+TWKVRG C D SN D LF+ V VYG+I +SDI+   +G Y+YGH  G W  N MHDN  YGFDPHDDSD+LTI  N  Y+NG HGIIAS                           XXXXXXXXXXXXXXXX   L  +E+    VSDN F +N++G R  +GS  NV  +N+++ +T    YSY G+D   P+V   +G + DN +            + L++D T  +DNT
Sbjct:  140 LRAHGGSLDFLSTKVFAWDTS--INGPDRDEEDG---RSYVSAVSEVITDDSQTCNGRAKNNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHD-LFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYDNGYHGIIASKRCNGVSIQGNEVYGGATSSAGIFLHRXXXXXXXXXXXXXXXXDAGLAMMESFNADVSDNIFENNKYGIRFSVGSGRNVFFNNVISGSTRYSTYSYLGSD--APDVVD-SGRSQDNVFQENNIIGGVESIKLLDADGTQFIDNT 451          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8579.19987.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G257_ECTSI1.410e-20197.34Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
A0A6H5J745_9PHAE4.170e-8663.55MEP21 protein (Fragment) n=1 Tax=Ectocarpus sp. CC... [more]
D7G261_ECTSI1.080e-7751.49Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7FRR8_ECTSI5.280e-7147.12Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7FWW1_ECTSI4.950e-6962.92Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5JNF4_9PHAE3.090e-6661.33MEP16 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
A8CEP1_SACJA3.550e-6346.81Mannuronan C-5 epimerase n=1 Tax=Saccharina japoni... [more]
D7G339_ECTSI8.600e-6339.56Mannuronan C-5-epimerase n=2 Tax=Ectocarpus silicu... [more]
D7FXE4_ECTSI1.850e-6239.25Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
Q7XAJ7_9PHAE1.140e-6045.48Mannuronan C-5-epimerase n=1 Tax=Laminaria digitat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8579contigEcto-sp13_S_contig8579:3..4878 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score217.6
Seed ortholog evalue8.6e-54
Seed eggNOG ortholog2880.D8LC73
Model size1017
KEGG koko:K11244
KEGG Pathwayko04011,ko04139,map04011,map04139
Hectar predicted targeting categoryother localisation
Exons9
EggNOG free text desc.protein xylosyltransferase activity
EggNOG OGsKOG4157@1,KOG4157@2759
Cds size999
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8579.19987.1prot_Ecto-sp13_S_contig8579.19987.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig8579 21..4878 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464128.933389-UTR-Ecto-sp13_S_contig8579:2..201681464128.933389-UTR-Ecto-sp13_S_contig8579:2..20Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig8579 3..20 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464128.9472156-CDS-Ecto-sp13_S_contig8579:20..591681464128.9472156-CDS-Ecto-sp13_S_contig8579:20..59Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8579 21..59 +
1681464128.9582431-CDS-Ecto-sp13_S_contig8579:447..5431681464128.9582431-CDS-Ecto-sp13_S_contig8579:447..543Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8579 448..543 +
1681464128.9696271-CDS-Ecto-sp13_S_contig8579:891..10261681464128.9696271-CDS-Ecto-sp13_S_contig8579:891..1026Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8579 892..1026 +
1681464128.9808946-CDS-Ecto-sp13_S_contig8579:1517..16741681464128.9808946-CDS-Ecto-sp13_S_contig8579:1517..1674Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8579 1518..1674 +
1681464128.9923518-CDS-Ecto-sp13_S_contig8579:2084..21621681464128.9923518-CDS-Ecto-sp13_S_contig8579:2084..2162Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8579 2085..2162 +
1681464129.0073361-CDS-Ecto-sp13_S_contig8579:2606..27291681464129.0073361-CDS-Ecto-sp13_S_contig8579:2606..2729Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8579 2607..2729 +
1681464129.016786-CDS-Ecto-sp13_S_contig8579:3090..32211681464129.016786-CDS-Ecto-sp13_S_contig8579:3090..3221Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8579 3091..3221 +
1681464129.0255575-CDS-Ecto-sp13_S_contig8579:3638..37571681464129.0255575-CDS-Ecto-sp13_S_contig8579:3638..3757Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8579 3639..3757 +
1681464129.0340257-CDS-Ecto-sp13_S_contig8579:4757..48781681464129.0340257-CDS-Ecto-sp13_S_contig8579:4757..4878Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8579 4758..4878 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig8579.19987.1

>prot_Ecto-sp13_S_contig8579.19987.1 ID=prot_Ecto-sp13_S_contig8579.19987.1|Name=mRNA_Ecto-sp13_S_contig8579.19987.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=333bp
MGHGGNIDIESTVVRSWDASKTLDHILKDSDDGTTNRSFISCVSEVVVDA
DETCDGTAQNDMGECRMDIIDSTVAYFGYDETESYGITWKVRGLCDDLSN
KDTLFDSVRVYGDIKNSDIYGMWYGHYSYGHLGGVWTNNLMHDNHVYGFD
PHDDSDYLTISGNTCYNNGNHGIIASKRCDHLLVEDNESYDNGGSGIMLH
KSCDDSIVRGNTVYSNGDAGLSLVETSYCVVSDNEFTDNRWGFRVILGST
GNVLDSNILTENTYSDIYSYYGADEEVPEVEPFTGINTDNTYRFLNSDNT
HVVDNTGDAASGESDDITNSCFTAESNRTPVC*
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mRNA from alignment at Ecto-sp13_S_contig8579:3..4878+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig8579.19987.1 ID=mRNA_Ecto-sp13_S_contig8579.19987.1|Name=mRNA_Ecto-sp13_S_contig8579.19987.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4876bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8579:3..4878+ (Ectocarpus species13 EcNAP12_S_4_19m)
AAGGCGTGGAACCGAATCATGGGTCACGGGGGCAACATCGACATCGAGTC GACGGTGGTGAGGATAGCAGCAGTCTTAGCGTCGTCGTCTTGTGGTACCA ATGTCATCGGTCAGTACCGTAGCGTTGTACCACTTTCGTGTGGTACGCTG TTTTGGGGGTTTTGGTTTTGACAGGTCAAAAGCCCCTAGCAGTCTTGACG TCGTCGTCGTCTTCCGGTACCATAGCCGTCAGGCAGTACCGTTGGCGTAC GACGCTCGTGTGGTACGTTGTTTTTTGGGGGGTTGGTTTTCGACAGGTCA AGCCCCAGTAGTCCCAAACTGAACAAGGTGTCGTTGGAACGTTTCTATGC GAAGTTTCTTTGTGGACCGCACGCCACACTTGTCGCGATTTCATGATAAG TCGTTGATTCACAAAATGTCGACTGTCGTCGTTGTCTCGGATCAGGTGAG GAGCTGGGACGCCTCTAAGACTCTGGACCACATCCTCAAGGATAGTGATG ACGGCACGACCAACCGATCCTTCATCTCGTGCGTCAGCGAGGTGAGCAAA AAAGTTGCTACGCGGCCCCATCTGTTTTTTTTTTCTCCTTGTTTGGCGAT TCGAAGCAAGGAAAATAATCTTATGGTACGATATTATGAAAACCCGTTCA TGACGCTCCCGTAACACTTCTGAACACGGGGCGGGGTTCATGGCGTTCTT ACACATTTCTCTGTTTGACTTGATTCCTCTTTCGGCCATGTGTGGTGGGT GTTCTCGCGCAGGGTAGGAAACGCGGTGTTTGAGTGTGGCCGTCGTTTCG TTCCTTCTGTCTTGGCTCTCATGCGGTCCATTCATCAATCTCTCTTCTCT CTTTTGTTCCTCCGTGCACTCCCCTCTTCTTTTGCACAGGTGGTGGTTGA TGCGGACGAGACCTGCGACGGCACGGCACAGAACGACATGGGGGAATGCC GGATGGACATCATCGACAGCACGGTGGCCTACTTCGGCTACGACGAGACC GAGAGCTACGGGATCACGTGGAAGGTGACGCCGCACCTACCTGTTAGTCG TTTGGGCCATCCCTTGAGACCCCGCCAGTAGCCTCACAAGGATATTCTAT CTTGGCTTTAGTATGTATAAGGTATGTAATGGGCGGGGTTGGGGGGTACG GGTAGGGACTTGAAACCTCCCTCTCTACTTTCATGGATTTTTTTAAGAAA GTTAACATAACGCCAAAGAAAGACTACCCGTTCGAGATATTATCTCAGTC GAAAGGAATGTGGAGGAGTCTTTTCAGTGAGTGGAGGAATTTGTTATTTC TTGCGAAGACCGGGTCCGACCAAGCTAGAGGGGGTGGGTGGGCAGATAAG AGACGCATTTATCCCCGTCGGTGTCTTACATTGTGGTCGCCCCGGTCGAT TGATGTCCGTATCGATATGTCGCAGTGTAGCTTTTTATCTCATCGAACGG CGGCCGCAAGAGTGTTTCGTGACGAAAGTCGTGCGTGCTCATCCGTTTTT CGTTTTTGTTGCCAGGTGCGCGGTCTGTGCGACGATCTGAGCAACAAGGA CACACTGTTCGACTCTGTTCGCGTCTACGGCGACATCAAGAACTCCGACA TCTACGGCATGTGGTACGGGCACTACAGCTACGGCCACCTCGGCGGAGTG TGGACGAACAACCTCATGCACGGTAAGGGGTATTCATGTTGACAGAGAGG TCGGGTACTGTCAACAGGTGTGCGTGCCGGGGGGGTGTAGTACCATGCTT CGCTGGATGATACATGAACCTGGCGAAATTGGGCACGTGTACGGAAATCG GCGGGGCGAGGTGTGTAATGCATCATGTAAGGTAGGAGTTAGGCACCACC GCTGCAAGTGTCATGTGTGGTTTCCACACATATCCCTGTGAGTGCCTGCG CGATCTGTACTGTAGGCTGAAACAGGTTTGATGCGCATGGTCATGTCCCT GTGAGTGCCTGCGCGATCTGTATCGTAGGCTGAAACGGGTTTGATGCGCA TGATGGCGTCGACTTGCTCCTCACCATCCTCTCCTTTGACGAGTTTGCTA TCCCCCCCCCTCCCTCATTTCTGTATTTTCAGACAACCACGTGTACGGGT TTGACCCACATGACGACAGCGACTACCTCACCATTTCTGGCAACACGTGC TACAACAACGGTAAGAGGGGGAGGATGCGGCAGAGAAAGAAAACGAACTC TGGGGGAAAGTTGTCGTGAAATGGTTGTTGTACATGTTTCTTCAGCGGAA ACAAAAGGCGTGGTACCTGTTACCGAAGTCACGAATTGCGCTCGTTTGCG ACGTAGCGTGTACGTAAGGCGGAAAGCGGCGATGGTTTTGTTTGAAACTC GGCAAGCGTTTCGTTCGTATTTTGTCGTGGTGTTGGTGTGCGAAAGTACC ACTCGGAGGCCACCTGAAGTGCCGGCCCGATTCAACCGCGCACTACACCG GACGTTACAGATATAACCCCTGATGTGGATTTATGTTCTTTGTTGATCCC TTTGTGTACATTTTTGCGCAGCAATCGGACAGGTTCTCTCATGTTGTGCA AATATCGAGAGTCTTGACCGTTTTTTTGTCTTGGTTGTCGTGTGTTGTGT GCAGGCAACCACGGCATCATCGCGTCCAAGCGGTGCGACCACCTTCTGGT CGAGGACAACGAGTCCTACGACAATGGCGGGAGTGGCATCATGCTCCACA AGAGCTGCGACGACTCTATCGTCCGAGGTATGCGCGTGAATATGTTTGTT GGGGTAGCATGGACCACGCCAACCGGCTGACCACTGAAAATAGCGCGCGC GTGTGTGTAGCTGTTTCTTGTGACATGTTCACGTTTGTTGAACGTGCTCC CAGGATGCCCCTTTTTTGTTTTCTGCCAGAGTGGTGTGCAGCAGTAGCGG AGGGATGTACAAGCCCCCCCTCGGCCCCTCCCCTCACCTCCCCTCCCCTC CCTTCCAAAATACCTTTTTGTCAACGCGGAAAAACGGTGTTTGAAACCGG ATTTACCCCGCCGCCCCTGAAGTATCCACGCGAGAAAAATGGCTCAAAAT TGTACACACCTTGCGGCCTCCTCTTGCACGTTGTGCAGGAAACACGGTCT ACAGCAACGGAGACGCGGGCCTCTCTTTGGTGGAGACCTCTTACTGCGTG GTTTCGGACAACGAGTTCACGGACAACCGTTGGGGGTTCCGAGTCATCTT GGGGTCTACCGGGAACGTCGTGAGTGACAGCAGTAGTGGTTGTTGCTTTC GTTGTGGCGATGGTTGTCGTTGCTTGTCGTCGTTGCTGTTTTTGCTGCTT GTCGTTGTTGTTGTGGTTTTGGTTGTTTGTGGTTGTTGATGTTGCTGTTG CTGTGACGGCTGTTGTTTGTCGTTGTTGTTTTTGGTCCTTGTCGTTGCTG TTGTTTGTCGTCGTTGTTGTTGTCGTTGTTGTTGTTGTGATTCATCATTG TTTTTTGTTGTCGTTGTTGTTGTGGGTTTGTAGGTGTTGCAATACCACTT TCAGCACGGGCCGTGTTGATCGTTGAAAAGCGGACAGCAACGCCTTTAGC CGACCAGAGCCTCAAACCTTTTTTCCTGAACACCTTCCCTCGTCCACCAC TCGTGTTTCTTGTTTCGTGTTGTTTCCTGTGTTCAGTTGGACAGCAACAT CTTGACGGAGAACACGTACTCCGACATCTACTCGTACTACGGCGCGGACG AGGAGGTTCCCGAGGTGGAACCGTTCACCGGCATCAACACGGACAACACC TACAGGTTCGTTCGTTTGTCCTTCCTTTTTTAGCTTCAGCCATGATATGC ACGCTCCTTTTTGTTCTTGTTCCACGACTTGAAATCAACGCTCACACACA CAGCATTTGTCCCGTGCAGGATTGCTATTTCGCACGTAGTCACGCAGAGG GGTCGCTCCCCCTGTGGCACGGCCCCCACCCCTCCCCTCCTGCAGTGCCT GTGTTGTATCGCGAGATTTCGCGGGCTGTTGGTTGCTGCCGTTGGTTGCC AAACGATTGTGTCTCTGTCTAATGGCGGCGTGTGGCACTGTCTTGGGTCG TCCGAAGCACGAGTATAAGGTCACTTCGGGTGTTTCTGTCCCCCAATCGG AGAAAAATGGCAGCGCGCACACGGGCGCGCATTTTGTTGTTTGTCTTCGC GCAAACATTTCGAGGGCGCCCCATTCCCTCGTCTCACTTGTTTGTGTTCC TCCCAGGCGGAACTGACTGGATAGAAGTAGTTGTCCTCCCATCGAAGCAG TCCACCGATCTTATTGAGCCAATGCATAGCTCAAGCAGCGTCTCTAGTTG CCGTAACACACAAAATTCTGTACCGCTGCCGCTGTCGCCCCTTGGAAACA ACGGGCACACAAACTGCAATGGACCGTGTCCCAACTCTTTCTTTGGTGCC TGTGCCCCCCCCCCCCCGCCCGCGCGCCTCTCGTTTTTTGCAATGTGCAG CAACAACGTGGTGACCCACGTGGTGAAGACTACGGTGGACATCGAGGACT CTGACGGTACCATCATCTCCGGAAACGCCTTCTCTGGCAACGACAACGGG GCCCACTTTGTGTAAGTAACCAAGACAACATGCCACCTTCCATCCTTGAC ACCAGGAAACCCGTCCGAAAAAAAAACAACGAAAGGGCGTCAAATCCGTC CGTAACGAAGTTGTTTGTTTTGTTTCCCACTTGCCGAAATTTTTTAAACT GGATCCCCGATCGCTCGCTCGCTGCTGCTGCTGCTGCTGTACTACGTGGT GTTAGGTTCTTGAACTCCGACAACACGCACGTGGTGGACAACACGGGAGA CGCGGCCAGCGGAGAGTCGGACGACATCACGAACTCGTGCTTCACGGCTG AGTCGAACCGCACGCCGGTGTGTTAA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8579:3..4878+

>mRNA_Ecto-sp13_S_contig8579.19987.1 ID=mRNA_Ecto-sp13_S_contig8579.19987.1|Name=mRNA_Ecto-sp13_S_contig8579.19987.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=999bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8579:3..4878+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGGTCACGGGGGCAACATCGACATCGAGTCGACGGTGGTGAGGAGCTG
GGACGCCTCTAAGACTCTGGACCACATCCTCAAGGATAGTGATGACGGCA
CGACCAACCGATCCTTCATCTCGTGCGTCAGCGAGGTGGTGGTTGATGCG
GACGAGACCTGCGACGGCACGGCACAGAACGACATGGGGGAATGCCGGAT
GGACATCATCGACAGCACGGTGGCCTACTTCGGCTACGACGAGACCGAGA
GCTACGGGATCACGTGGAAGGTGCGCGGTCTGTGCGACGATCTGAGCAAC
AAGGACACACTGTTCGACTCTGTTCGCGTCTACGGCGACATCAAGAACTC
CGACATCTACGGCATGTGGTACGGGCACTACAGCTACGGCCACCTCGGCG
GAGTGTGGACGAACAACCTCATGCACGACAACCACGTGTACGGGTTTGAC
CCACATGACGACAGCGACTACCTCACCATTTCTGGCAACACGTGCTACAA
CAACGGCAACCACGGCATCATCGCGTCCAAGCGGTGCGACCACCTTCTGG
TCGAGGACAACGAGTCCTACGACAATGGCGGGAGTGGCATCATGCTCCAC
AAGAGCTGCGACGACTCTATCGTCCGAGGAAACACGGTCTACAGCAACGG
AGACGCGGGCCTCTCTTTGGTGGAGACCTCTTACTGCGTGGTTTCGGACA
ACGAGTTCACGGACAACCGTTGGGGGTTCCGAGTCATCTTGGGGTCTACC
GGGAACGTCTTGGACAGCAACATCTTGACGGAGAACACGTACTCCGACAT
CTACTCGTACTACGGCGCGGACGAGGAGGTTCCCGAGGTGGAACCGTTCA
CCGGCATCAACACGGACAACACCTACAGGTTCTTGAACTCCGACAACACG
CACGTGGTGGACAACACGGGAGACGCGGCCAGCGGAGAGTCGGACGACAT
CACGAACTCGTGCTTCACGGCTGAGTCGAACCGCACGCCGGTGTGTTAA
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