prot_Ecto-sp13_S_contig8576.19984.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8576.19984.1
Unique Nameprot_Ecto-sp13_S_contig8576.19984.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length46
Homology
BLAST of mRNA_Ecto-sp13_S_contig8576.19984.1 vs. uniprot
Match: A0A6H5L7Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Z1_9PHAE)

HSP 1 Score: 93.2 bits (230), Expect = 5.520e-21
Identity = 42/45 (93.33%), Postives = 45/45 (100.00%), Query Frame = 0
Query:    1 MDMGVSSDPLVIFRLGGKEKRSRVIQKNLNPQWEEVFEFECRSSG 45
            +DMGVSSDPLVIF+LGGKE+RSRVIQKNLNPQWEEVFEFECRSSG
Sbjct:  559 LDMGVSSDPLVIFKLGGKEQRSRVIQKNLNPQWEEVFEFECRSSG 603          
BLAST of mRNA_Ecto-sp13_S_contig8576.19984.1 vs. uniprot
Match: D8LF87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF87_ECTSI)

HSP 1 Score: 90.5 bits (223), Expect = 4.880e-20
Identity = 40/45 (88.89%), Postives = 44/45 (97.78%), Query Frame = 0
Query:    1 MDMGVSSDPLVIFRLGGKEKRSRVIQKNLNPQWEEVFEFECRSSG 45
            +DMG SSDPLVIF+LGGKE+RSRVIQKNLNPQWEEVFEFECR+SG
Sbjct:  482 LDMGTSSDPLVIFKLGGKEQRSRVIQKNLNPQWEEVFEFECRNSG 526          
BLAST of mRNA_Ecto-sp13_S_contig8576.19984.1 vs. uniprot
Match: A0A2G8KVR0_STIJA (Uncharacterized protein n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8KVR0_STIJA)

HSP 1 Score: 53.1 bits (126), Expect = 6.980e-7
Identity = 20/40 (50.00%), Postives = 30/40 (75.00%), Query Frame = 0
Query:    6 SSDPLVIFRLGGKEKRSRVIQKNLNPQWEEVFEFECRSSG 45
            +SDP V  ++G  +KR+R +Q+NLNP+W E+F FEC +S 
Sbjct:  115 TSDPYVTVQVGKVKKRTRTVQQNLNPEWNEIFYFECHNSS 154          
BLAST of mRNA_Ecto-sp13_S_contig8576.19984.1 vs. uniprot
Match: A0A2G8JDW2_STIJA (Uncharacterized protein n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8JDW2_STIJA)

HSP 1 Score: 53.1 bits (126), Expect = 6.980e-7
Identity = 20/40 (50.00%), Postives = 30/40 (75.00%), Query Frame = 0
Query:    6 SSDPLVIFRLGGKEKRSRVIQKNLNPQWEEVFEFECRSSG 45
            +SDP V  ++G  +KR+R +Q+NLNP+W E+F FEC +S 
Sbjct:  651 TSDPYVTVQVGKVKKRTRTVQQNLNPEWNEIFYFECHNSS 690          
BLAST of mRNA_Ecto-sp13_S_contig8576.19984.1 vs. uniprot
Match: A0A7M5V543_9CNID (C2 domain-containing protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5V543_9CNID)

HSP 1 Score: 52.8 bits (125), Expect = 9.360e-7
Identity = 21/44 (47.73%), Postives = 30/44 (68.18%), Query Frame = 0
Query:    2 DMGVSSDPLVIFRLGGKEKRSRVIQKNLNPQWEEVFEFECRSSG 45
            D   +SDP V  ++G  +KR++ IQKNLNP W E+F F+C +S 
Sbjct:   62 DKAGTSDPYVTVQVGKVKKRTKTIQKNLNPVWNEIFNFQCHNSS 105          
BLAST of mRNA_Ecto-sp13_S_contig8576.19984.1 vs. uniprot
Match: A0A7M5XAE6_9CNID (Uncharacterized protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5XAE6_9CNID)

HSP 1 Score: 52.8 bits (125), Expect = 9.550e-7
Identity = 21/44 (47.73%), Postives = 30/44 (68.18%), Query Frame = 0
Query:    2 DMGVSSDPLVIFRLGGKEKRSRVIQKNLNPQWEEVFEFECRSSG 45
            D   +SDP V  ++G  +KR++ IQKNLNP W E+F F+C +S 
Sbjct:  616 DKAGTSDPYVTVQVGKVKKRTKTIQKNLNPVWNEIFNFQCHNSS 659          
BLAST of mRNA_Ecto-sp13_S_contig8576.19984.1 vs. uniprot
Match: A0A7S3AL68_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AL68_9EUKA)

HSP 1 Score: 50.4 bits (119), Expect = 1.830e-6
Identity = 23/39 (58.97%), Postives = 27/39 (69.23%), Query Frame = 0
Query:    2 DMGVSSDPLVIFRLGGKEKRSRVIQKNLNPQWEEVFEFE 40
            DM   SDP VI   G +EKRSR I+K L+P+W EV EFE
Sbjct:    1 DMNGKSDPYVIVSSGRQEKRSRTIKKTLDPEWNEVLEFE 39          
BLAST of mRNA_Ecto-sp13_S_contig8576.19984.1 vs. uniprot
Match: A0A803J8G1_XENTR (C2 domain-containing protein n=1 Tax=Xenopus tropicalis TaxID=8364 RepID=A0A803J8G1_XENTR)

HSP 1 Score: 47.8 bits (112), Expect = 4.130e-6
Identity = 21/38 (55.26%), Postives = 26/38 (68.42%), Query Frame = 0
Query:    6 SSDPLVIFRLGGKEKRSRVIQKNLNPQWEEVFEFECRS 43
            SSDP V+   GG   +++VIQKNLNPQW E FE   +S
Sbjct:   11 SSDPYVVIHGGGTTVQTKVIQKNLNPQWNETFEVSEKS 48          
BLAST of mRNA_Ecto-sp13_S_contig8576.19984.1 vs. uniprot
Match: A0A0M0J625_9EUKA (Transgelin 2 n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J625_9EUKA)

HSP 1 Score: 50.8 bits (120), Expect = 4.400e-6
Identity = 23/39 (58.97%), Postives = 27/39 (69.23%), Query Frame = 0
Query:    1 MDMGVSSDPLVIFRLGGKEKRSRVIQKNLNPQWEEVFEF 39
            +D    SDP V F L GKE +S+VI KNLNP+W EVF F
Sbjct:   71 LDNNGKSDPYVKFSLAGKEVKSKVISKNLNPRWGEVFTF 109          
BLAST of mRNA_Ecto-sp13_S_contig8576.19984.1 vs. uniprot
Match: UPI00189B7F05 (protein unc-13 homolog B n=1 Tax=Nematolebias whitei TaxID=451745 RepID=UPI00189B7F05)

HSP 1 Score: 50.8 bits (120), Expect = 4.580e-6
Identity = 21/40 (52.50%), Postives = 28/40 (70.00%), Query Frame = 0
Query:    6 SSDPLVIFRLGGKEKRSRVIQKNLNPQWEEVFEFECRSSG 45
            SSDP V  ++G  +KR++ I  NLNP WEE F+FEC +S 
Sbjct:  338 SSDPYVTIQVGKTKKRTKTIYGNLNPVWEEKFDFECHNSS 377          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8576.19984.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7Z1_9PHAE5.520e-2193.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LF87_ECTSI4.880e-2088.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A2G8KVR0_STIJA6.980e-750.00Uncharacterized protein n=1 Tax=Stichopus japonicu... [more]
A0A2G8JDW2_STIJA6.980e-750.00Uncharacterized protein n=1 Tax=Stichopus japonicu... [more]
A0A7M5V543_9CNID9.360e-747.73C2 domain-containing protein n=1 Tax=Clytia hemisp... [more]
A0A7M5XAE6_9CNID9.550e-747.73Uncharacterized protein n=1 Tax=Clytia hemisphaeri... [more]
A0A7S3AL68_9EUKA1.830e-658.97Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
A0A803J8G1_XENTR4.130e-655.26C2 domain-containing protein n=1 Tax=Xenopus tropi... [more]
A0A0M0J625_9EUKA4.400e-658.97Transgelin 2 n=1 Tax=Chrysochromulina tobinii TaxI... [more]
UPI00189B7F054.580e-652.50protein unc-13 homolog B n=1 Tax=Nematolebias whit... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035892C2 domain superfamilyGENE3D2.60.40.150coord: 1..45
e-value: 2.8E-12
score: 48.6
IPR000008C2 domainPFAMPF00168C2coord: 2..43
e-value: 2.0E-9
score: 37.6
IPR000008C2 domainPROSITEPS50004C2coord: 1..45
score: 9.42
NoneNo IPR availableSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 1..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8576contigEcto-sp13_S_contig8576:5838..5975 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8576.19984.1mRNA_Ecto-sp13_S_contig8576.19984.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8576 5838..5993 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8576.19984.1 ID=prot_Ecto-sp13_S_contig8576.19984.1|Name=mRNA_Ecto-sp13_S_contig8576.19984.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=46bp
MDMGVSSDPLVIFRLGGKEKRSRVIQKNLNPQWEEVFEFECRSSG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035892C2_domain_sf
IPR000008C2_dom