mRNA_Ecto-sp13_S_contig8568.19975.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig8568.19975.1
Unique NamemRNA_Ecto-sp13_S_contig8568.19975.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig8568.19975.1 vs. uniprot
Match: D7FW97_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW97_ECTSI)

HSP 1 Score: 600 bits (1547), Expect = 1.350e-210
Identity = 297/308 (96.43%), Postives = 299/308 (97.08%), Query Frame = 1
Query:   43 ALSGHKSFLVVNATRRVMEVEAEHIKLMKPDFTGSLMEFHREGAADVFKGYDDLAFFTASEEAMLVRSMVDSTHGGENPPKGVQAGSHSYGAVYALRLAGLVTEAMQAHRACTSRTRVWENCLYGVGADVKGVNNYFGPETAFYFAWMNFYFRWLLVPGIAGLLVTVHKAIVGRETDNYRWTPLYALIVMLWAASFQKYWKRTCAEWSWKFGTALVSEEEILRPEFVGEERISPVTGEKERYYPTHKRLMRYCESVVVTTVMLLVALVFMICSLNLQGYMVLPEGDSVTAIESWFYVPWLSKFAEEGG 966
            A S   SFLVVNATRRVMEVEAEHIKLMKPDFTGSLMEFHREGAADVFKGYDDLAFFTASEEA+LVRSMVDST GGENPPKGV  GSHSYGAVYALRLAGLVTEAMQAHRACTSRTRVWENCLYGVGADVKGVNNYFGPETAFYFAW+NFYFRWLLVPGIAGLLVTVHKAIVGRETDNYRWTPLYALIVMLWAASFQKYWKRTCAEWSWKFGTALVSEEEILR EFVGEERISPVTGEKERYYPTHKRLMRYCESVVVTT MLLVALVFMICSLNLQGYMVLPEGDSVTAIESWFYVPWLSKFAEEGG
Sbjct:   52 AASVEHSFLVVNATRRVMEVEAEHIKLMKPDFTGSLMEFHREGAADVFKGYDDLAFFTASEEALLVRSMVDSTQGGENPPKGVPTGSHSYGAVYALRLAGLVTEAMQAHRACTSRTRVWENCLYGVGADVKGVNNYFGPETAFYFAWINFYFRWLLVPGIAGLLVTVHKAIVGRETDNYRWTPLYALIVMLWAASFQKYWKRTCAEWSWKFGTALVSEEEILRAEFVGEERISPVTGEKERYYPTHKRLMRYCESVVVTTAMLLVALVFMICSLNLQGYMVLPEGDSVTAIESWFYVPWLSKFAEEGG 359          
BLAST of mRNA_Ecto-sp13_S_contig8568.19975.1 vs. uniprot
Match: A0A813JHV4_POLGL (Hypothetical protein n=3 Tax=Polarella glacialis TaxID=89957 RepID=A0A813JHV4_POLGL)

HSP 1 Score: 184 bits (467), Expect = 2.260e-49
Identity = 124/343 (36.15%), Postives = 175/343 (51.02%), Query Frame = 1
Query:   64 FLVVNATRRVMEVEAEHIKLMKPD------FTGS---LMEFHREGAADVFKGYDD-LAFFTASEEAMLVRSMVD--------------STHGGENPPKGVQAGSHSYGAVY-------ALRLAGLVTEAMQAHRACTSRTRVWENCLYGVGADVKGVNNYFGPETAFYFAWMNFYFRWLLVPGIAGLLVTVHKAIVGRETDNYRWTPLYALIVMLWAASFQKYWKRTCAEWSWKFGT------------ALVSEEEILRPEFVGEERISPVTGEKERYYPTHKRLMRYCESVVVTTVMLLVALVFMICSLNLQGYMVLPEGDSVTAIESWFYVPWLSKFAEEG 963
            FLVV A +  +E EAE +  +KP         G    L EF R   AD   G+   +A F   E+  L+RS++D              S  G E+P    QA      A+        +LR+AGLV          ++R  VW++ ++ +   V+ V  YFG + AFYFAW+N +  WL VP + GL    H  + G   D++ + P Y+L  +LW   F  +W+R  A W+WK+G             A    EE +RPEF GE R SP TG +ER+YP+ KR + Y +SVVVT+VML +A   MICSLNLQGYM        T++E  FY+P L++++  G
Sbjct:   31 FLVVTAGQEQLEREAERLGYLKPHRDLVPYVAGQGLGLTEFRR---AD--PGFSSSVAGFWPCEKVQLLRSLMDFVPNHSEALLSHLKSLEGQEHPHSTAQAAFRVKSAIKVSQSLLASLRIAGLVEHVAPMQEERSARLAVWQSGMFKMFVPVEPVQEYFGSQVAFYFAWLNSFTAWLSVPALIGLACYAHMQVHGFTVDDHPFLPFYSLFAVLWGVVFVCHWERASAAWAWKWGVLGAQRDSRVFQNAAAQIEEQVRPEFTGELRCSPATGRQERHYPSRKRYVAYLQSVVVTSVMLCIAFFVMICSLNLQGYM----ECHATSLERIFYIPALARYSHPG 364          
BLAST of mRNA_Ecto-sp13_S_contig8568.19975.1 vs. uniprot
Match: A0A812TEM0_9DINO (ANO10 protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812TEM0_9DINO)

HSP 1 Score: 157 bits (397), Expect = 1.620e-39
Identity = 112/325 (34.46%), Postives = 161/325 (49.54%), Query Frame = 1
Query:   61 SFLVVNATRRVMEVEAEHIKLMK---------PDFTGSLMEFHREGAADV--FKGYDDLAFFTASEEAMLVRSMVDSTHGGENPPKGVQ-----AGSHSYGAVYALRLAGLVTEAMQAHR-ACTSRTRVWENCLYGVGADVKGVNNYFGPETAFYFAWMNFYFRWLLVPGIAGLLVTVHKAIVGRETDNYRWTPLYALIVMLWAASFQKYWKRTCAEWSWKFG-------TALVSEEEILRPEFVGEERISPVTGEKERYYPTHKRLMRYCESVVVTTVMLLVALVFMICSLNLQGYMVLPEGDSVTAIESWFYVPWLSKFAEEG 963
            SFLVV+A R ++E EA H   +K         P      +EF    +  +  ++GY    F+   E A L+   ++      +  K +Q     A S +   + A+ +AGL+   +      C+ R  +W+  L  +   V  V+ YFG E A YFAWMN +  WLL P   G+         G   D+  + P ++L V+ W+A F + W + C+E SW +        T L  EE   RP + GE R S  TG+ ERYYP   R++ Y  SVVVT++ML+VA   MICSLNLQGYM  P     T+ E  FY+P L++ A  G
Sbjct:   54 SFLVVSAPRELLEREAVHQGYVKAHLALQPHVPGQGAGKIEFEMSSSEWLQGYEGYASPDFWLPCERAQLLHGCLEQVPADVDELKALQVRHPTALSVTPNLLPAMTIAGLMESVVPMDDDLCSERRALWKVSLRNILTPVASVHRYFGSEVALYFAWMNHFTLWLLAPAGVGVAAYCRMNFFGYTVDDDPYLPFHSLFVVFWSACFLRSWDQRCSELSWHWNVHGIELLTGLRPEE--YRPGYHGELRQSRATGQPERYYPYSNRILAYIVSVVVTSMMLVVAFCVMICSLNLQGYMDAPA----TSFEKLFYIPRLARLAHPG 372          
BLAST of mRNA_Ecto-sp13_S_contig8568.19975.1 vs. uniprot
Match: A0A7S2RRJ8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RRJ8_9STRA)

HSP 1 Score: 153 bits (386), Expect = 5.740e-39
Identity = 78/175 (44.57%), Postives = 112/175 (64.00%), Query Frame = 1
Query:  439 VNNYFGPETAFYFAWMNFYFRWLLVPGIAGLLVTVHKAIVGRETDNYRWTPLYALIVMLWAASFQKYWKRTCAEWSWKFGTALVSEEEILRPEFVGEERISPVTGEKERYYPTHKRLMRYCESVVVTTVMLLVALVFMICSLNLQGYMVLPEGDSVTAIESWFYVPWLSKFAEEG 963
            +  Y G   AFYFAWMNF+ + L++P   GL + +HK   G   +N+ + PLYAL ++ WA  F + WKR  A W+ ++GT   +E + +RPEF GE R+SPV+G+ ER+YP +KR + Y  S +VT   L VA + MICSLNLQGY+     DS    E  F++PWLS++++ G
Sbjct:    3 IQAYLGSHIAFYFAWMNFFTQSLVLPAFLGLAMYLHKVYYGFTVENHPYLPLYALFMVFWAILFVQCWKRKSASWACQWGTIGEAERDDVRPEFRGELRVSPVSGDMERFYPAYKRRLSYLLSGLVTGSFLCVAFLVMICSLNLQGYI----KDSGQWTEQIFFIPWLSRWSDPG 173          
BLAST of mRNA_Ecto-sp13_S_contig8568.19975.1 vs. uniprot
Match: A0A1Q9EWA3_SYMMI (Anoctamin-10 n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9EWA3_SYMMI)

HSP 1 Score: 137 bits (344), Expect = 4.320e-34
Identity = 81/192 (42.19%), Postives = 106/192 (55.21%), Query Frame = 1
Query:  409 LYGVGADVKGVNNYFGPETAFYFAWMNFYFRWLLVPGIAGLLVTVHKAIVGRETDNYRWTPLYALIVMLWAASFQKYWKRTCAEWSWKFG-------TALVSEEEILRPEFVGEERISPVTGEKERYYPTHKRLMRYCESVVVTTVMLLVALVFMICSLNLQGYMVLPEGDSVTAIESWFYVPWLSKFAEEG 963
            L  V   V  V+ YFG E A YFAWMN +  WLL P   G+         G   D+  + P ++L V+ W+A F + W + C+E SW +        T L  EE   RP + GE R S  TG+ ERYYP   R++ Y  SVVVT++ML+VA   MICSLNLQGYM  P     T+ E +FY+P L++ A  G
Sbjct:   26 LRNVLTPVASVHRYFGSEVALYFAWMNHFTLWLLAPAGVGVAAYCRMNFFGYTVDDDPYLPFHSLFVVFWSACFLRSWDQRCSELSWHWNVHGIELLTGLRPEE--YRPGYHGELRQSRATGQPERYYPYPNRILAYIVSVVVTSMMLVVAFCVMICSLNLQGYMDAPA----TSFEKFFYIPRLARLAHPG 211          
BLAST of mRNA_Ecto-sp13_S_contig8568.19975.1 vs. uniprot
Match: A0A7S4J1E6_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J1E6_9STRA)

HSP 1 Score: 140 bits (354), Expect = 1.320e-33
Identity = 77/193 (39.90%), Postives = 113/193 (58.55%), Query Frame = 1
Query:  418 VGADVKGVNNYFGPETAFYFAWMNFYFRWLLVPGIAGLLVTVHKAIVGRETDNYRWTPLYALIVMLWAASFQKYWKR--TCAEWSWKFGTALVSEEEIL--RPEFVGEERISPVTGEKERYYPTHKRLMRYCESVVVTTVMLLVALVFMICSLNLQGYMVLPEGDSVTAIESW-------FYVPWLSKFAEEG 963
            VG  ++ + +Y+G E AFYFAWM  + RWL+ PG+ GL++ + K   G   D  R+ P + LI  +W   F +YW+R  T   + W   ++L + + +   RP F GE R+SPVTG  E++YPT+KR ++Y  S ++T ++L VA + MI SLNLQGY V P  D     E W       FY P+ +  AE+G
Sbjct:  223 VGPPIRPLKDYYGDEVAFYFAWMEHFTRWLIFPGVVGLIIYILKIRSGETVDTCRFIPFHGLITFIWGIFFLRYWERQETRLAFDWGNFSSLGTSKTVFNARPNFYGELRVSPVTGALEKHYPTYKRYLKYFVSALITMMLLAVAFLVMILSLNLQGY-VRPRDDR----ERWQSDHEHPFYYPFFAHLAEDG 410          
BLAST of mRNA_Ecto-sp13_S_contig8568.19975.1 vs. uniprot
Match: A0A7S4IRG0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IRG0_9EUKA)

HSP 1 Score: 136 bits (343), Expect = 9.110e-33
Identity = 96/315 (30.48%), Postives = 161/315 (51.11%), Query Frame = 1
Query:   43 ALSGHKSFLVVNATRRVMEVEAEHIKLMKPDFTGSLMEFHREGAADVFKGYDDLAFFTASEEAMLVRSMVDSTHGGENPPKGVQAG------SHSYGAVYALRLAGLVTEAMQAHRACTSRTRVWENCLYGV-GADVKGVNNYFGPETAFYFAWMNFYFRWLLVPGIAGLLVT-VHKAIVGRETDNYRWTPLYALIVMLWAASFQKYWKRTCAEWSWKFGTALVSEEEILRPEFVGEERISPVTGEKERYYPTHKRLMRYCESVVVTTVMLLVALVFMICSLNLQGYMVLPEGDSVTAIESWFYVPWLSKFAEEG 963
            A+  +++ L++ A   +   EAE  +LMKP  +  +++       + F  +++  FF  +E A ++  ++D+        K ++           + +V+ +     + E +Q       +T++W   ++ +    V+ + +Y+G   AFYF WMNFY  WL+   + G  ++ V  A V    DN  + P +AL ++LW   F K WKR  AE+++++ T     +E  RP F G+ R S +T E E +YPT  R M+Y  S +VT VML +A V MICSLNLQGY+      +     + F+V  L KF+E G
Sbjct:   35 AVQTNETSLLITAPDVLYYEEAERQQLMKPLKSSGILDEFTVNDKESFVDWNEENFFVPAELAHMLHELLDNVTPDNTFIKELEKSLSRKVKHEEHESVFQVLTRIEIMEELQLKHDKAKQTKLWNKIVWSIYKMPVQSIRDYYGESVAFYFGWMNFYTFWLIPAAVVGATLSFVRPADV--TIDNAPYIPFFALFMVLWGFLFIKIWKRKTAEFAFQWDTHDRVRKETYRPSFYGKWRKSEITDEMELHYPTSIRRMKYLVSFLVTLVMLCIAFVVMICSLNLQGYV---SCHNRLGGSNPFHVEALHKFSEPG 344          
BLAST of mRNA_Ecto-sp13_S_contig8568.19975.1 vs. uniprot
Match: B8C6T3_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C6T3_THAPS)

HSP 1 Score: 129 bits (324), Expect = 1.280e-29
Identity = 103/345 (29.86%), Postives = 154/345 (44.64%), Query Frame = 1
Query:   49 SGHKSFLVVNATRRVMEVEAEHIKLMKP---------------------DFTGSLMEFHREGAADVFKGYDDLAFFTASEEAMLVRSMVDSTHGGENPPKGVQAGS-----HSYGAVY--------------ALRLAGLVTEAMQAHRACTSRTRVWENCLYGVGADVKGVNNYFGPETAFYFAWMNFYFRWLLVPGIAGLLVTVHKAIVGRETDNYRWTPLYALIVMLWAASFQKYWKRTCAEWSWKFGT-ALVSEEEILRPEFVGEERISPVTGEKERYYPTHKRLMRYCESVVVTTVMLLVALVFMICSLNLQGYMVLPEGDSVTAIESWFYVPWLSKFAEE 960
            SG    L +  T++++E EAE +KL+KP                     DF    + F  +   D    +D    FT+S+ A L+ SM++S        KG +A        S   VY               L+  G V      H+       + E         ++ +  Y+G   AFYFAWM F  RW + PGI GL+V + +   G   DN  +TP       +WA    +YW R  A  S+K+GT A V+     RP +VGE R+S VTG+ E++YP HKR +    S + T V+L  A V M+ S+N+QGY+   + +     +   Y P  ++ AE+
Sbjct:   48 SGCSVVLGLTTTQQLLENEAELVKLVKPSRTQYSHIPLTMEHFSVASRGDFVNLNVSFSSD---DDDMNFDSEGLFTSSDRAFLLESMLNSI---AVLDKGQEASDLTRCFDSQNVVYLEDTCQHNSKSLCQVLKSNGFVDVVCPVHQPYLREKILKETVCLKSPLPLQHIREYYGEGVAFYFAWMQFMTRWFVYPGILGLVVYLIRMYRGDTIDNCEFTPFLGFGTFIWAILCNQYWVRREARLSYKWGTFAPVTSYRDQRPNYVGEMRVSKVTGKMEKHYPCHKRRLMIAISAIFTVVLLAGACVVMVISMNVQGYISREDQEEFEG-DHPLYFPRFARLAEK 385          
BLAST of mRNA_Ecto-sp13_S_contig8568.19975.1 vs. uniprot
Match: A0A8J2SNX7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SNX7_9STRA)

HSP 1 Score: 126 bits (316), Expect = 1.430e-28
Identity = 103/317 (32.49%), Postives = 161/317 (50.79%), Query Frame = 1
Query:   64 FLVVNATRRVMEVEAEHIKLMKPDFTGSLMEFH--REGAADVFKGYDDLAFFTASEEAMLV-----RSMVDSTHGG----------ENPPKGVQAGSHSYGAVYALRLAGLVTEAMQAHRACTSRTRVWENCLYGVGADVKGVNNYFGPETAFYFAWMNFYFRWLLVPGIAGLLVTVHKAIVGRETDNYRWTPLYALIVMLWAASFQKYWKRTCAEWSWKFGTALVSEEEILRPEFVGEERISPVTGEKERYYPTHKRLMRYCESVVVTTVMLLVALVFMICSLNLQGYMVLPEGDSVTAIESWFYVPWLSKFAEEG 963
            +L+V     V+  EA+  KL+K   +   +E    R+GA   ++   +   F+ +EEA+L+     ++ V+    G          + PP+  Q    S   + AL+  G++ +++            W      V A  + ++  FG + A YFAWMNF+  WLL+P + G  V   +   G   D+ +W P+YAL V LWAA F K+W R  A+ +   G  L++ +  +RP + G  R SPVTG+ ERY P   R + Y  S++VT +ML VAL++ + SLNLQGY+     D V   E  FY   ++K+A EG
Sbjct:   77 YLLVTCKGDVLAREADACKLVKTRRSDKRVEVFVDRDGARLRYELDAEGCLFSRAEEALLLERACTKATVEQAAEGLGARWKKKSRDLPPQIAQLAEDSL--LEALKQTGVIEDSVILGINTQMSWWAW------VCAPSQKIHKAFGSDVALYFAWMNFFQLWLLIPSLVGGYVYHLRIEEGVSIDDDQWAPVYALAVCLWAALFCKFWSRREAQVAVDHGDVLLASDGGVRPGYRGAPRPSPVTGKLERYSPPIYRHLAYILSIIVTGLMLRVALLWHVISLNLQGYI---TSDYVG--EQDFYRADVAKYALEG 380          
BLAST of mRNA_Ecto-sp13_S_contig8568.19975.1 vs. uniprot
Match: B7G411_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G411_PHATC)

HSP 1 Score: 126 bits (316), Expect = 1.460e-28
Identity = 70/155 (45.16%), Postives = 94/155 (60.65%), Query Frame = 1
Query:  430 VKGVNNYFGPETAFYFAWMNFYFRWLLVPGIAGLLVTVHKAIVGRETDNYRWTPLYALIVMLWAASFQKYWKRTCAEWSWKFGTALVSEEE-----ILRPEFVGEERISPVTGEKERYYPTHKRLMRYCESVVVTTVMLLVALVFMICSLNLQGY 879
            ++ + +Y+G E  FYFAWM F  RWL  PGI GLLV + +   G   D   +TP Y L+  LWA  F ++W+R     ++++GT  +S+ E      +RPEF G  R SPVTGE E YY   +R ++Y  S +VT+VML VA   MI SLNLQGY
Sbjct:  233 IELIQDYYGWEIGFYFAWMEFLTRWLFFPGILGLLVYIIRCYRGDTIDTDEYTPFYGLVTFLWAVLFLRFWERHEHRLAYQWGTFSLSQYERQKFFAVRPEFRGYLRKSPVTGEVETYYEPLQRRIKYIGSALVTSVMLAVAFSVMILSLNLQGY 387          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8568.19975.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FW97_ECTSI1.350e-21096.43Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A813JHV4_POLGL2.260e-4936.15Hypothetical protein n=3 Tax=Polarella glacialis T... [more]
A0A812TEM0_9DINO1.620e-3934.46ANO10 protein n=1 Tax=Symbiodinium sp. CCMP2592 Ta... [more]
A0A7S2RRJ8_9STRA5.740e-3944.57Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A1Q9EWA3_SYMMI4.320e-3442.19Anoctamin-10 n=1 Tax=Symbiodinium microadriaticum ... [more]
A0A7S4J1E6_9STRA1.320e-3339.90Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S4IRG0_9EUKA9.110e-3330.48Hypothetical protein (Fragment) n=1 Tax=Vannella s... [more]
B8C6T3_THAPS1.280e-2929.86Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A8J2SNX7_9STRA1.430e-2832.49Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
B7G411_PHATC1.460e-2845.16Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8568contigEcto-sp13_S_contig8568:1330..6776 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score603.6
Seed ortholog evalue5.4e-170
Seed eggNOG ortholog2880.D7FW97
Model size966
KEGG koko:K19327
KEGG TC1.A.17.1
Hectar predicted targeting categorysignal peptide
Exons9
EggNOG free text desc.intracellular chloride channel activity
EggNOG OGsKOG2513@1,KOG2513@2759
Ec32 ortholog descriptionAnoctamin
Ec32 orthologEc-01_003870.1
Cds size966
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04040
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8568.19975.1prot_Ecto-sp13_S_contig8568.19975.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig8568 1330..6776 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464127.783051-CDS-Ecto-sp13_S_contig8568:1329..14691681464127.783051-CDS-Ecto-sp13_S_contig8568:1329..1469Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8568 1330..1469 +
1681464127.8012462-CDS-Ecto-sp13_S_contig8568:2350..24381681464127.8012462-CDS-Ecto-sp13_S_contig8568:2350..2438Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8568 2351..2438 +
1681464127.8128822-CDS-Ecto-sp13_S_contig8568:2875..29871681464127.8128822-CDS-Ecto-sp13_S_contig8568:2875..2987Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8568 2876..2987 +
1681464127.8253605-CDS-Ecto-sp13_S_contig8568:3311..34331681464127.8253605-CDS-Ecto-sp13_S_contig8568:3311..3433Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8568 3312..3433 +
1681464127.8436778-CDS-Ecto-sp13_S_contig8568:4026..41131681464127.8436778-CDS-Ecto-sp13_S_contig8568:4026..4113Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8568 4027..4113 +
1681464127.859985-CDS-Ecto-sp13_S_contig8568:4648..47611681464127.859985-CDS-Ecto-sp13_S_contig8568:4648..4761Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8568 4649..4761 +
1681464127.8717842-CDS-Ecto-sp13_S_contig8568:5297..53991681464127.8717842-CDS-Ecto-sp13_S_contig8568:5297..5399Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8568 5298..5399 +
1681464127.8822775-CDS-Ecto-sp13_S_contig8568:5865..59741681464127.8822775-CDS-Ecto-sp13_S_contig8568:5865..5974Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8568 5866..5974 +
1681464127.8933744-CDS-Ecto-sp13_S_contig8568:6683..67761681464127.8933744-CDS-Ecto-sp13_S_contig8568:6683..6776Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8568 6684..6776 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig8568.19975.1

>prot_Ecto-sp13_S_contig8568.19975.1 ID=prot_Ecto-sp13_S_contig8568.19975.1|Name=mRNA_Ecto-sp13_S_contig8568.19975.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=322bp
HVLVVCLLIAADAAALSGHKSFLVVNATRRVMEVEAEHIKLMKPDFTGSL
MEFHREGAADVFKGYDDLAFFTASEEAMLVRSMVDSTHGGENPPKGVQAG
SHSYGAVYALRLAGLVTEAMQAHRACTSRTRVWENCLYGVGADVKGVNNY
FGPETAFYFAWMNFYFRWLLVPGIAGLLVTVHKAIVGRETDNYRWTPLYA
LIVMLWAASFQKYWKRTCAEWSWKFGTALVSEEEILRPEFVGEERISPVT
GEKERYYPTHKRLMRYCESVVVTTVMLLVALVFMICSLNLQGYMVLPEGD
SVTAIESWFYVPWLSKFAEEGG
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mRNA from alignment at Ecto-sp13_S_contig8568:1330..6776+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig8568.19975.1 ID=mRNA_Ecto-sp13_S_contig8568.19975.1|Name=mRNA_Ecto-sp13_S_contig8568.19975.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5447bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8568:1330..6776+ (Ectocarpus species13 EcNAP12_S_4_19m)
CACGTCCTCGTCGTGTGCTTGTTGATCGCTGCCGACGCCGCCGCCTTGTC GGGTCATAAAAGCTTCTTAGTGGTGAATGCGACCAGGCGGGTGATGGAGG TGGAGGCAGAGCACATCAAGCTGATGAAGCCGGACTTCACGTGAGAGCCA CAAAATGACCAGTGCTACTGTTGTTGTCTTTACATGTTTTTCGGGCGAAC CTCGTTGTCGAGGAGAGTATTGCTGTTGAATAGACCACTGTTGGTGGAGG TGGAGCCGTTGGTGTTGGGGTCGCGTTGTTGTGGTTACCATCAGATAGCA GTCCGGCGAGGAGTTCAGGAGCGGGCAGGAAGAGGCGGAGGTGCAGCGTG TTCTTTTGGCGTTGCTTTGGTTGAGATCGCAGCCGACTCAGGGCAAGTCC CGCATAAAGCGATCGTGGTGGGCGACAGGGGAGGTAAACCCTGCTGTGTG CCCCCCATGCAGTTGCGTTCAGTTCGGAGGAGTAACCCCATCGTAAGAGG GGCTTCTGTGGTAGCAGCCCAGATACGTAGCTGTGGACTCAGGAAGGCTT TCCTGCATGGCCTGTATATGGAATCACTCGGTTGAACGTGTTGCTGCGCA CTACTTCCTCCGCGTCTCGGTGTTCCGCGAACGAAGGCAATATATCTATG TCGCGTCCGGTGGTTGCGTAGCACCTTACCCCGTCTATCTTGTTGTCATA TCTGCGCAAGCGCAAGTATGCGCTGCCTTTATACTAGTATCAGCAAAGAG GCGCGTTGCCACCGACGTGCAGGGCAATGTTTTCCCTCCCGAAATTCGGC GTACGAATTGTGCCGAACACCTCCGCCGCTCCGAAGTTCTGCAACGGCGG ATAGGGCTGTCTTGTTTGTGCGATGTCGTAGAGACAGCAGCGTGATCGAT CGCTCTGTTCCTGCTTGGACCAAGGCTATTATAGTCCTTTTTTCATAACA CTCATTCACGGCATGCACCGCCCCCCCACTGCCCCACTGTACCTTTCATC GCCATTGACACTTTTGTCCAGCGGGAGTCTGATGGAGTTCCACCGGGAAG GTGCGGCGGATGTGTTCAAGGGCTATGATGACCTCGCTTTCTTCACGGCT TCGGAGGAGGTGTGTGTTGTGTTTCCGCTCGTTTGTTCCAACAAGAAGCG TGGCGTGTCCGATCCGACGGTACAGGCATGGCCGGCAACCTCGCCGCCTG CCGCTTGTGTCCTTCTCGATGATTGAGGTGCAAAGCTAAAGACAGCAGAA CAGGGAGGGAGAGGGAGAAGAGGGGGTAAGAAGGGTGAACGGCAGAGGAA AATGTCACAGAGAGTGGTGGGACACAGACACTACTAGGTTCGAGGGATCA TGCCTAGAAGAGCAGGGGGCAGCGACAGGAAGCGCTTAATTCAAACTTGC GAAAAGCGACAACAGCCAATCGATCACTTACATGTCCGTCACGGACAAGT CAAAGCTGTTCGCTTCGTGTGTCTTCTTGACCGATGATTGGATGGCTCAA GAAAAGTCCCGCGCCCCTTCCGCTCCGCGCGTGCTTACTCTGGCAGGCTA TGCTAGTTCGGTCGATGGTGGACTCCACCCACGGCGGTGAAAACCCTCCC AAGGGAGTGCAAGCGGGGTCGCACTCCTACGGCGCTGTCTACGCGCTACG GCTGGCCGGTACGTCTCCGGCGGCACACCTTAGTAGGGAATGGCCTCCAC CATGGCACAGCCGTGTCATGGTTTCTGTGCAAAGCTGCTCTTTTCCTACC CCGAAGAATGTCTTTCTTCCGTCGGCCGGCCGTTCTCGGGTGTTGGCACG AAGACGCTTCTCTAGTCTGGTCGTCTTCCCGTCTTCCTTTATTGAGGCAA AAGGAATCAAGCGCGTCGGGTCTTGTTGACATAATTGTTTTGCTACTAGG ACTGCCTCGTCACCGCCCAAATCCATCCAGACTGACCAACGACCGAACGA ACAAATGCCATCAACAAAAAATACGAGGTCAGGGTTGGTAACGGAAGCAA TGCAGGCTCACCGAGCTTGTACCTCGAGGACGAGGGTGTGGGAGAACTGC CTCTACGGCGTTGGCGCGGACGTGAAGGGGGTCAACAACTACTTCGGGCC CGAGGTAGATACAGTACCTTGGCGTACGATTGTTTGGTGTTGTTTGTGTT GTGGTCCATACTGTTGTGTATTCCCTCACATTGGCCCGAACATCGAGCGT GCACTCGTACGTACTTTGTTGGTATTTTGACGCATCTCCCGTTTCTTTCT CTTGTTTTGCGTGTGTGAGTTTTTTTTTTTGTGTGTGTGTGTGTTTTTTT GTTTTGTACGATTATTTTTTCGCCCGACCTGTTCTCGAACCCGTGATCTC CGTGTCCAAGGAACAAGCCGCCGAGAGAGAGACCCAGAGAGATGATGGCG GCGATTTGCTGTGTGGCGATACGGAAACGGAACTTTTCGAACCAAAAAAG AAGTTCGGCGTGATGACAATTGCGCGGGCTGTTAACTTCGTTCCGGTGCC GTATGATGTGCTTGCGAAGTACGACAAAATAGAATATACAAGAATGTGTT GCAAGTGATGGAACGAAGCTACAACTGTATACCACCTCATTCAAGATATT TCCGCGCGATCTGAGAGGGCGGCTGCCCGTGCGAAATTCCGCTTTATTCC GCTTGTCTCGGCGTTGCTTGCGTGCGGCGTCATGCGTTGTGCGGCAGACG GCGTTCTACTTCGCGTGGATGAACTTCTACTTCCGGTGGCTGCTCGTGCC CGGCATCGCTGGCCTGCTGGTTACCGTCCACAAGGTGGGAAAGTGGGCCA GCCGTGCGTGCGAAGCGCGTCAGGAGCCCAGCAAAAGCTGTGGTTTTTGT GTGTGATGTTTGGTCGTGGGGCTAGCTAGACGTTCGTAGGGGCTCTACCA TTGCTCACCACGAAGGTGTTTAGTGTCTAGTGTCTAAGTGTCCAGTCTAA GCGCGTTTATAGCTAGCGTCCAGTGTATAGTCTCACTCACTGATTCATCG AAACCATCATCAGTCGTCGGCCAAAGCAACCCCAAAACCATCCGACCAAC CCGTCCAACTATCCAACAGAGCCAGTCTGTTGGTGCATGTCATGACCTGC TCTCTTGCGGATTAATCGTCGAAGCTGCTTTCTCCCAAAATTCAGCCCTG GCTGTGCGTTGGCCCTCTTCCCCTTGGAGTGGGCGTCCTATTCATAGTGA GCGATGTGGACAGCAGCGTAGGCTGGCAGTAGGTGTTGTTGGTGCTGTTG GTGCATTGACTCATAAAATGCCATGCACCCCGATCTTGCAACATGCTACA TCACGGAACGCACGGACAGGCGATTGTTGGGAGGGAGACGGACAACTATC GGTGGACCCCGCTGTACGCGCTGATCGTCATGCTGTGGGCGGCCTCCTTC CAGAAGTACTGGAAGAGGACGTGTGCTGAATGGTGACTGACCCATTCGCT CACTCGGTGTCAATACATGCATTGTAGGAAGTCAACGGGTGGATGCATTT GTCGATAGGATTTTTCACTCGGTGTCATCACGCGTTGTATAAGTAGGTAA GAGTTAATGGATATGAATGCATTTTTGGGGGGGGGGGGCGGAAAGGTGGT GCGTCTTGACATGTACGCTGCAATGGTTACCATGTGCGCTGCTGCTCTTG CCATTTGCTCCACAAGAACACTGAAAGAGGAGGACATCCCGCAGCGTATG TTTAGTATCGACAGAGCGTTTTCTACAGGAGAGATTTTGGCAGTGCTACC CGAAGTTACGACGATCCATATCTAACTTCAACAACGATTCCAAATCCTTC ACAATCATGATTCTGTGACGAAAAATTCCATCCTTCCACAGGTCGGAATG GTGGAACACAAAACGCCCAAGAGTTTTTTAAAAGGTGTTTCGTAAGGGTA TATACCATGTAGAAACAGCAACGAGGGCAGCAGCAACAATGACACGACTG TGGCAACAACAATAACAGGTCTTGGAAGTTCGGGACGGCTCTGGTGAGCG AGGAGGAAATTCTCAGGCCAGAGTTCGTGGGGGAAGAGAGGATTTCTCCC GTTACGGGGGAGAAGGAGAGGTGAGGACGAAACGACACTATTAGTGCTGT ACCAGGTATTAATGTTCGCACGCGTTAGGAATTTTGCAGCGTGAGACCAC ATAAACCTTTTGGTAACAAAAGAGGATGGCATGCCCCGAAGTAGGTTAAA CTACGGGGCGCGGCGGCAAACCGGTTCATACGGGAATCGGGAACTCCTTG TTACGTTACGCTCTGGGAAGTGTGTGTGCGGCGGGGAGGTCGGAATGCGC GACCTTCTTGTGAGTCGCTTTGAAACTTAAAACTGTGAATTTCGGTACTT CGATGTAACCCGAAAACACAGACGTGGACCGGAATTGTTTCGAGCCACGG CGTGGGCGTCGGCGCGTGCCGGTTTCTTGATGACGGTCTGTTCGGTTGGA TGTCCACTAAGTGGTCCAGAAAACCTACTGAGCCTGTTTCCCGACCTTAT TTTATCTGTTTGTTTTTGCACCCAACTCCAACGCAGGTACTACCCCACGC ACAAGCGTCTGATGCGATATTGCGAGAGCGTCGTTGTGACCACAGTCATG CTGCTCGTGGCGCTCGTCTTCATGATCTGCTCGCTCAACTTGCAGGTGCG TGAAGATGAAAAGCAGAATATAAACAGCAATATCTGTACAGCAGCACTGA CAAGAAGTAGTGCGTATGACTTCCAACAACTTCCAACAGACGGCGTTTAT TTGTCTCGAACGGTAGTCTCTTTGGGATTGCGTGTATGTTCTCCTAATAA AAGCGTGGTTCTGTTACCTGCGTGGTTCGGCGACATTTGGATCCATCAAC GTATGCGAAAACACACAACTCTTCCCCGTGAGATATGTTTGTAAAATTAG GGCGAAAATTCGTTGTCGGGCTAAATTCTTTTGAGAGTTTCTCTGCAGCT TTTTCGGCAAATGCTCTTTCTCCCACAACTGATTGGATGATGTTTTTCCG CAGCCATCTTGAAACCAATGCCTTGGAGGAGGCACAACGGGGATGTTTTT CTGTCTTAAGGCTTGTTTCTTCTTGTCTCCACCCAAGTCTCGTGCCTCTG TTGGAGCTGGGTCGAGCGGGTGTGTTCCTATCCCCTCCCCTCCCTTATCC TCCTTCCCCGTGTGGGGAATACTCTCTGTTTCTTCGTCATTCCGTCCCCC ATTCAATCAAGTGAATCTCGTGACGCTCGTTTGAAGAAACAACTTTGACC GCGCACAAGAAGTGACAGGACGGATGTGGCACGCAGTTACTGTACGTCAT TGGTCGAACGTAAAGATGGATTCGCCGTCTCGTCGCAACGGTTGATCGCG GCAGGGCTACATGGTGTTGCCCGAGGGCGATTCCGTTACGGCGATCGAGT CTTGGTTCTACGTGCCGTGGCTGTCCAAGTTCGCCGAGGAGGGAGGG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8568:1330..6776+

>mRNA_Ecto-sp13_S_contig8568.19975.1 ID=mRNA_Ecto-sp13_S_contig8568.19975.1|Name=mRNA_Ecto-sp13_S_contig8568.19975.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=966bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8568:1330..6776+ (Ectocarpus species13 EcNAP12_S_4_19m)
CACGTCCTCGTCGTGTGCTTGTTGATCGCTGCCGACGCCGCCGCCTTGTC
GGGTCATAAAAGCTTCTTAGTGGTGAATGCGACCAGGCGGGTGATGGAGG
TGGAGGCAGAGCACATCAAGCTGATGAAGCCGGACTTCACCGGGAGTCTG
ATGGAGTTCCACCGGGAAGGTGCGGCGGATGTGTTCAAGGGCTATGATGA
CCTCGCTTTCTTCACGGCTTCGGAGGAGGCTATGCTAGTTCGGTCGATGG
TGGACTCCACCCACGGCGGTGAAAACCCTCCCAAGGGAGTGCAAGCGGGG
TCGCACTCCTACGGCGCTGTCTACGCGCTACGGCTGGCCGGGTTGGTAAC
GGAAGCAATGCAGGCTCACCGAGCTTGTACCTCGAGGACGAGGGTGTGGG
AGAACTGCCTCTACGGCGTTGGCGCGGACGTGAAGGGGGTCAACAACTAC
TTCGGGCCCGAGACGGCGTTCTACTTCGCGTGGATGAACTTCTACTTCCG
GTGGCTGCTCGTGCCCGGCATCGCTGGCCTGCTGGTTACCGTCCACAAGG
CGATTGTTGGGAGGGAGACGGACAACTATCGGTGGACCCCGCTGTACGCG
CTGATCGTCATGCTGTGGGCGGCCTCCTTCCAGAAGTACTGGAAGAGGAC
GTGTGCTGAATGGTCTTGGAAGTTCGGGACGGCTCTGGTGAGCGAGGAGG
AAATTCTCAGGCCAGAGTTCGTGGGGGAAGAGAGGATTTCTCCCGTTACG
GGGGAGAAGGAGAGGTACTACCCCACGCACAAGCGTCTGATGCGATATTG
CGAGAGCGTCGTTGTGACCACAGTCATGCTGCTCGTGGCGCTCGTCTTCA
TGATCTGCTCGCTCAACTTGCAGGGCTACATGGTGTTGCCCGAGGGCGAT
TCCGTTACGGCGATCGAGTCTTGGTTCTACGTGCCGTGGCTGTCCAAGTT
CGCCGAGGAGGGAGGG
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