mRNA_Ecto-sp13_S_contig8568.19975.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8568.19975.1 vs. uniprot
Match: D7FW97_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW97_ECTSI) HSP 1 Score: 600 bits (1547), Expect = 1.350e-210 Identity = 297/308 (96.43%), Postives = 299/308 (97.08%), Query Frame = 1
Query: 43 ALSGHKSFLVVNATRRVMEVEAEHIKLMKPDFTGSLMEFHREGAADVFKGYDDLAFFTASEEAMLVRSMVDSTHGGENPPKGVQAGSHSYGAVYALRLAGLVTEAMQAHRACTSRTRVWENCLYGVGADVKGVNNYFGPETAFYFAWMNFYFRWLLVPGIAGLLVTVHKAIVGRETDNYRWTPLYALIVMLWAASFQKYWKRTCAEWSWKFGTALVSEEEILRPEFVGEERISPVTGEKERYYPTHKRLMRYCESVVVTTVMLLVALVFMICSLNLQGYMVLPEGDSVTAIESWFYVPWLSKFAEEGG 966
A S SFLVVNATRRVMEVEAEHIKLMKPDFTGSLMEFHREGAADVFKGYDDLAFFTASEEA+LVRSMVDST GGENPPKGV GSHSYGAVYALRLAGLVTEAMQAHRACTSRTRVWENCLYGVGADVKGVNNYFGPETAFYFAW+NFYFRWLLVPGIAGLLVTVHKAIVGRETDNYRWTPLYALIVMLWAASFQKYWKRTCAEWSWKFGTALVSEEEILR EFVGEERISPVTGEKERYYPTHKRLMRYCESVVVTT MLLVALVFMICSLNLQGYMVLPEGDSVTAIESWFYVPWLSKFAEEGG
Sbjct: 52 AASVEHSFLVVNATRRVMEVEAEHIKLMKPDFTGSLMEFHREGAADVFKGYDDLAFFTASEEALLVRSMVDSTQGGENPPKGVPTGSHSYGAVYALRLAGLVTEAMQAHRACTSRTRVWENCLYGVGADVKGVNNYFGPETAFYFAWINFYFRWLLVPGIAGLLVTVHKAIVGRETDNYRWTPLYALIVMLWAASFQKYWKRTCAEWSWKFGTALVSEEEILRAEFVGEERISPVTGEKERYYPTHKRLMRYCESVVVTTAMLLVALVFMICSLNLQGYMVLPEGDSVTAIESWFYVPWLSKFAEEGG 359
BLAST of mRNA_Ecto-sp13_S_contig8568.19975.1 vs. uniprot
Match: A0A813JHV4_POLGL (Hypothetical protein n=3 Tax=Polarella glacialis TaxID=89957 RepID=A0A813JHV4_POLGL) HSP 1 Score: 184 bits (467), Expect = 2.260e-49 Identity = 124/343 (36.15%), Postives = 175/343 (51.02%), Query Frame = 1
Query: 64 FLVVNATRRVMEVEAEHIKLMKPD------FTGS---LMEFHREGAADVFKGYDD-LAFFTASEEAMLVRSMVD--------------STHGGENPPKGVQAGSHSYGAVY-------ALRLAGLVTEAMQAHRACTSRTRVWENCLYGVGADVKGVNNYFGPETAFYFAWMNFYFRWLLVPGIAGLLVTVHKAIVGRETDNYRWTPLYALIVMLWAASFQKYWKRTCAEWSWKFGT------------ALVSEEEILRPEFVGEERISPVTGEKERYYPTHKRLMRYCESVVVTTVMLLVALVFMICSLNLQGYMVLPEGDSVTAIESWFYVPWLSKFAEEG 963
FLVV A + +E EAE + +KP G L EF R AD G+ +A F E+ L+RS++D S G E+P QA A+ +LR+AGLV ++R VW++ ++ + V+ V YFG + AFYFAW+N + WL VP + GL H + G D++ + P Y+L +LW F +W+R A W+WK+G A EE +RPEF GE R SP TG +ER+YP+ KR + Y +SVVVT+VML +A MICSLNLQGYM T++E FY+P L++++ G
Sbjct: 31 FLVVTAGQEQLEREAERLGYLKPHRDLVPYVAGQGLGLTEFRR---AD--PGFSSSVAGFWPCEKVQLLRSLMDFVPNHSEALLSHLKSLEGQEHPHSTAQAAFRVKSAIKVSQSLLASLRIAGLVEHVAPMQEERSARLAVWQSGMFKMFVPVEPVQEYFGSQVAFYFAWLNSFTAWLSVPALIGLACYAHMQVHGFTVDDHPFLPFYSLFAVLWGVVFVCHWERASAAWAWKWGVLGAQRDSRVFQNAAAQIEEQVRPEFTGELRCSPATGRQERHYPSRKRYVAYLQSVVVTSVMLCIAFFVMICSLNLQGYM----ECHATSLERIFYIPALARYSHPG 364
BLAST of mRNA_Ecto-sp13_S_contig8568.19975.1 vs. uniprot
Match: A0A812TEM0_9DINO (ANO10 protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812TEM0_9DINO) HSP 1 Score: 157 bits (397), Expect = 1.620e-39 Identity = 112/325 (34.46%), Postives = 161/325 (49.54%), Query Frame = 1
Query: 61 SFLVVNATRRVMEVEAEHIKLMK---------PDFTGSLMEFHREGAADV--FKGYDDLAFFTASEEAMLVRSMVDSTHGGENPPKGVQ-----AGSHSYGAVYALRLAGLVTEAMQAHR-ACTSRTRVWENCLYGVGADVKGVNNYFGPETAFYFAWMNFYFRWLLVPGIAGLLVTVHKAIVGRETDNYRWTPLYALIVMLWAASFQKYWKRTCAEWSWKFG-------TALVSEEEILRPEFVGEERISPVTGEKERYYPTHKRLMRYCESVVVTTVMLLVALVFMICSLNLQGYMVLPEGDSVTAIESWFYVPWLSKFAEEG 963
SFLVV+A R ++E EA H +K P +EF + + ++GY F+ E A L+ ++ + K +Q A S + + A+ +AGL+ + C+ R +W+ L + V V+ YFG E A YFAWMN + WLL P G+ G D+ + P ++L V+ W+A F + W + C+E SW + T L EE RP + GE R S TG+ ERYYP R++ Y SVVVT++ML+VA MICSLNLQGYM P T+ E FY+P L++ A G
Sbjct: 54 SFLVVSAPRELLEREAVHQGYVKAHLALQPHVPGQGAGKIEFEMSSSEWLQGYEGYASPDFWLPCERAQLLHGCLEQVPADVDELKALQVRHPTALSVTPNLLPAMTIAGLMESVVPMDDDLCSERRALWKVSLRNILTPVASVHRYFGSEVALYFAWMNHFTLWLLAPAGVGVAAYCRMNFFGYTVDDDPYLPFHSLFVVFWSACFLRSWDQRCSELSWHWNVHGIELLTGLRPEE--YRPGYHGELRQSRATGQPERYYPYSNRILAYIVSVVVTSMMLVVAFCVMICSLNLQGYMDAPA----TSFEKLFYIPRLARLAHPG 372
BLAST of mRNA_Ecto-sp13_S_contig8568.19975.1 vs. uniprot
Match: A0A7S2RRJ8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RRJ8_9STRA) HSP 1 Score: 153 bits (386), Expect = 5.740e-39 Identity = 78/175 (44.57%), Postives = 112/175 (64.00%), Query Frame = 1
Query: 439 VNNYFGPETAFYFAWMNFYFRWLLVPGIAGLLVTVHKAIVGRETDNYRWTPLYALIVMLWAASFQKYWKRTCAEWSWKFGTALVSEEEILRPEFVGEERISPVTGEKERYYPTHKRLMRYCESVVVTTVMLLVALVFMICSLNLQGYMVLPEGDSVTAIESWFYVPWLSKFAEEG 963
+ Y G AFYFAWMNF+ + L++P GL + +HK G +N+ + PLYAL ++ WA F + WKR A W+ ++GT +E + +RPEF GE R+SPV+G+ ER+YP +KR + Y S +VT L VA + MICSLNLQGY+ DS E F++PWLS++++ G
Sbjct: 3 IQAYLGSHIAFYFAWMNFFTQSLVLPAFLGLAMYLHKVYYGFTVENHPYLPLYALFMVFWAILFVQCWKRKSASWACQWGTIGEAERDDVRPEFRGELRVSPVSGDMERFYPAYKRRLSYLLSGLVTGSFLCVAFLVMICSLNLQGYI----KDSGQWTEQIFFIPWLSRWSDPG 173
BLAST of mRNA_Ecto-sp13_S_contig8568.19975.1 vs. uniprot
Match: A0A1Q9EWA3_SYMMI (Anoctamin-10 n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9EWA3_SYMMI) HSP 1 Score: 137 bits (344), Expect = 4.320e-34 Identity = 81/192 (42.19%), Postives = 106/192 (55.21%), Query Frame = 1
Query: 409 LYGVGADVKGVNNYFGPETAFYFAWMNFYFRWLLVPGIAGLLVTVHKAIVGRETDNYRWTPLYALIVMLWAASFQKYWKRTCAEWSWKFG-------TALVSEEEILRPEFVGEERISPVTGEKERYYPTHKRLMRYCESVVVTTVMLLVALVFMICSLNLQGYMVLPEGDSVTAIESWFYVPWLSKFAEEG 963
L V V V+ YFG E A YFAWMN + WLL P G+ G D+ + P ++L V+ W+A F + W + C+E SW + T L EE RP + GE R S TG+ ERYYP R++ Y SVVVT++ML+VA MICSLNLQGYM P T+ E +FY+P L++ A G
Sbjct: 26 LRNVLTPVASVHRYFGSEVALYFAWMNHFTLWLLAPAGVGVAAYCRMNFFGYTVDDDPYLPFHSLFVVFWSACFLRSWDQRCSELSWHWNVHGIELLTGLRPEE--YRPGYHGELRQSRATGQPERYYPYPNRILAYIVSVVVTSMMLVVAFCVMICSLNLQGYMDAPA----TSFEKFFYIPRLARLAHPG 211
BLAST of mRNA_Ecto-sp13_S_contig8568.19975.1 vs. uniprot
Match: A0A7S4J1E6_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J1E6_9STRA) HSP 1 Score: 140 bits (354), Expect = 1.320e-33 Identity = 77/193 (39.90%), Postives = 113/193 (58.55%), Query Frame = 1
Query: 418 VGADVKGVNNYFGPETAFYFAWMNFYFRWLLVPGIAGLLVTVHKAIVGRETDNYRWTPLYALIVMLWAASFQKYWKR--TCAEWSWKFGTALVSEEEIL--RPEFVGEERISPVTGEKERYYPTHKRLMRYCESVVVTTVMLLVALVFMICSLNLQGYMVLPEGDSVTAIESW-------FYVPWLSKFAEEG 963
VG ++ + +Y+G E AFYFAWM + RWL+ PG+ GL++ + K G D R+ P + LI +W F +YW+R T + W ++L + + + RP F GE R+SPVTG E++YPT+KR ++Y S ++T ++L VA + MI SLNLQGY V P D E W FY P+ + AE+G
Sbjct: 223 VGPPIRPLKDYYGDEVAFYFAWMEHFTRWLIFPGVVGLIIYILKIRSGETVDTCRFIPFHGLITFIWGIFFLRYWERQETRLAFDWGNFSSLGTSKTVFNARPNFYGELRVSPVTGALEKHYPTYKRYLKYFVSALITMMLLAVAFLVMILSLNLQGY-VRPRDDR----ERWQSDHEHPFYYPFFAHLAEDG 410
BLAST of mRNA_Ecto-sp13_S_contig8568.19975.1 vs. uniprot
Match: A0A7S4IRG0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IRG0_9EUKA) HSP 1 Score: 136 bits (343), Expect = 9.110e-33 Identity = 96/315 (30.48%), Postives = 161/315 (51.11%), Query Frame = 1
Query: 43 ALSGHKSFLVVNATRRVMEVEAEHIKLMKPDFTGSLMEFHREGAADVFKGYDDLAFFTASEEAMLVRSMVDSTHGGENPPKGVQAG------SHSYGAVYALRLAGLVTEAMQAHRACTSRTRVWENCLYGV-GADVKGVNNYFGPETAFYFAWMNFYFRWLLVPGIAGLLVT-VHKAIVGRETDNYRWTPLYALIVMLWAASFQKYWKRTCAEWSWKFGTALVSEEEILRPEFVGEERISPVTGEKERYYPTHKRLMRYCESVVVTTVMLLVALVFMICSLNLQGYMVLPEGDSVTAIESWFYVPWLSKFAEEG 963
A+ +++ L++ A + EAE +LMKP + +++ + F +++ FF +E A ++ ++D+ K ++ + +V+ + + E +Q +T++W ++ + V+ + +Y+G AFYF WMNFY WL+ + G ++ V A V DN + P +AL ++LW F K WKR AE+++++ T +E RP F G+ R S +T E E +YPT R M+Y S +VT VML +A V MICSLNLQGY+ + + F+V L KF+E G
Sbjct: 35 AVQTNETSLLITAPDVLYYEEAERQQLMKPLKSSGILDEFTVNDKESFVDWNEENFFVPAELAHMLHELLDNVTPDNTFIKELEKSLSRKVKHEEHESVFQVLTRIEIMEELQLKHDKAKQTKLWNKIVWSIYKMPVQSIRDYYGESVAFYFGWMNFYTFWLIPAAVVGATLSFVRPADV--TIDNAPYIPFFALFMVLWGFLFIKIWKRKTAEFAFQWDTHDRVRKETYRPSFYGKWRKSEITDEMELHYPTSIRRMKYLVSFLVTLVMLCIAFVVMICSLNLQGYV---SCHNRLGGSNPFHVEALHKFSEPG 344
BLAST of mRNA_Ecto-sp13_S_contig8568.19975.1 vs. uniprot
Match: B8C6T3_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C6T3_THAPS) HSP 1 Score: 129 bits (324), Expect = 1.280e-29 Identity = 103/345 (29.86%), Postives = 154/345 (44.64%), Query Frame = 1
Query: 49 SGHKSFLVVNATRRVMEVEAEHIKLMKP---------------------DFTGSLMEFHREGAADVFKGYDDLAFFTASEEAMLVRSMVDSTHGGENPPKGVQAGS-----HSYGAVY--------------ALRLAGLVTEAMQAHRACTSRTRVWENCLYGVGADVKGVNNYFGPETAFYFAWMNFYFRWLLVPGIAGLLVTVHKAIVGRETDNYRWTPLYALIVMLWAASFQKYWKRTCAEWSWKFGT-ALVSEEEILRPEFVGEERISPVTGEKERYYPTHKRLMRYCESVVVTTVMLLVALVFMICSLNLQGYMVLPEGDSVTAIESWFYVPWLSKFAEE 960
SG L + T++++E EAE +KL+KP DF + F + D +D FT+S+ A L+ SM++S KG +A S VY L+ G V H+ + E ++ + Y+G AFYFAWM F RW + PGI GL+V + + G DN +TP +WA +YW R A S+K+GT A V+ RP +VGE R+S VTG+ E++YP HKR + S + T V+L A V M+ S+N+QGY+ + + + Y P ++ AE+
Sbjct: 48 SGCSVVLGLTTTQQLLENEAELVKLVKPSRTQYSHIPLTMEHFSVASRGDFVNLNVSFSSD---DDDMNFDSEGLFTSSDRAFLLESMLNSI---AVLDKGQEASDLTRCFDSQNVVYLEDTCQHNSKSLCQVLKSNGFVDVVCPVHQPYLREKILKETVCLKSPLPLQHIREYYGEGVAFYFAWMQFMTRWFVYPGILGLVVYLIRMYRGDTIDNCEFTPFLGFGTFIWAILCNQYWVRREARLSYKWGTFAPVTSYRDQRPNYVGEMRVSKVTGKMEKHYPCHKRRLMIAISAIFTVVLLAGACVVMVISMNVQGYISREDQEEFEG-DHPLYFPRFARLAEK 385
BLAST of mRNA_Ecto-sp13_S_contig8568.19975.1 vs. uniprot
Match: A0A8J2SNX7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SNX7_9STRA) HSP 1 Score: 126 bits (316), Expect = 1.430e-28 Identity = 103/317 (32.49%), Postives = 161/317 (50.79%), Query Frame = 1
Query: 64 FLVVNATRRVMEVEAEHIKLMKPDFTGSLMEFH--REGAADVFKGYDDLAFFTASEEAMLV-----RSMVDSTHGG----------ENPPKGVQAGSHSYGAVYALRLAGLVTEAMQAHRACTSRTRVWENCLYGVGADVKGVNNYFGPETAFYFAWMNFYFRWLLVPGIAGLLVTVHKAIVGRETDNYRWTPLYALIVMLWAASFQKYWKRTCAEWSWKFGTALVSEEEILRPEFVGEERISPVTGEKERYYPTHKRLMRYCESVVVTTVMLLVALVFMICSLNLQGYMVLPEGDSVTAIESWFYVPWLSKFAEEG 963
+L+V V+ EA+ KL+K + +E R+GA ++ + F+ +EEA+L+ ++ V+ G + PP+ Q S + AL+ G++ +++ W V A + ++ FG + A YFAWMNF+ WLL+P + G V + G D+ +W P+YAL V LWAA F K+W R A+ + G L++ + +RP + G R SPVTG+ ERY P R + Y S++VT +ML VAL++ + SLNLQGY+ D V E FY ++K+A EG
Sbjct: 77 YLLVTCKGDVLAREADACKLVKTRRSDKRVEVFVDRDGARLRYELDAEGCLFSRAEEALLLERACTKATVEQAAEGLGARWKKKSRDLPPQIAQLAEDSL--LEALKQTGVIEDSVILGINTQMSWWAW------VCAPSQKIHKAFGSDVALYFAWMNFFQLWLLIPSLVGGYVYHLRIEEGVSIDDDQWAPVYALAVCLWAALFCKFWSRREAQVAVDHGDVLLASDGGVRPGYRGAPRPSPVTGKLERYSPPIYRHLAYILSIIVTGLMLRVALLWHVISLNLQGYI---TSDYVG--EQDFYRADVAKYALEG 380
BLAST of mRNA_Ecto-sp13_S_contig8568.19975.1 vs. uniprot
Match: B7G411_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G411_PHATC) HSP 1 Score: 126 bits (316), Expect = 1.460e-28 Identity = 70/155 (45.16%), Postives = 94/155 (60.65%), Query Frame = 1
Query: 430 VKGVNNYFGPETAFYFAWMNFYFRWLLVPGIAGLLVTVHKAIVGRETDNYRWTPLYALIVMLWAASFQKYWKRTCAEWSWKFGTALVSEEE-----ILRPEFVGEERISPVTGEKERYYPTHKRLMRYCESVVVTTVMLLVALVFMICSLNLQGY 879
++ + +Y+G E FYFAWM F RWL PGI GLLV + + G D +TP Y L+ LWA F ++W+R ++++GT +S+ E +RPEF G R SPVTGE E YY +R ++Y S +VT+VML VA MI SLNLQGY
Sbjct: 233 IELIQDYYGWEIGFYFAWMEFLTRWLFFPGILGLLVYIIRCYRGDTIDTDEYTPFYGLVTFLWAVLFLRFWERHEHRLAYQWGTFSLSQYERQKFFAVRPEFRGYLRKSPVTGEVETYYEPLQRRIKYIGSALVTSVMLAVAFSVMILSLNLQGY 387 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8568.19975.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8568.19975.1 >prot_Ecto-sp13_S_contig8568.19975.1 ID=prot_Ecto-sp13_S_contig8568.19975.1|Name=mRNA_Ecto-sp13_S_contig8568.19975.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=322bp HVLVVCLLIAADAAALSGHKSFLVVNATRRVMEVEAEHIKLMKPDFTGSLback to top mRNA from alignment at Ecto-sp13_S_contig8568:1330..6776+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8568.19975.1 ID=mRNA_Ecto-sp13_S_contig8568.19975.1|Name=mRNA_Ecto-sp13_S_contig8568.19975.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5447bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8568:1330..6776+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8568:1330..6776+ >mRNA_Ecto-sp13_S_contig8568.19975.1 ID=mRNA_Ecto-sp13_S_contig8568.19975.1|Name=mRNA_Ecto-sp13_S_contig8568.19975.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=966bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8568:1330..6776+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |