mRNA_Ecto-sp13_S_contig8555.19959.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig8555.19959.1
Unique NamemRNA_Ecto-sp13_S_contig8555.19959.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig8555.19959.1 vs. uniprot
Match: D7FIB4_ECTSI (Hemolysin-related protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIB4_ECTSI)

HSP 1 Score: 580 bits (1494), Expect = 1.470e-203
Identity = 317/322 (98.45%), Postives = 318/322 (98.76%), Query Frame = 1
Query:    1 QVLNKDITRVLTTILMATTVCTIYNAALFTNLAIQMFGSAGLAYATAALTVTTLFFGELVPKALGVNNAEVVARRVLPIIIVLSVVLNPVAKTFTLISTLMLSMLGFKSTETGRVSEEELRLIVTGAKMSGGIESQEGMMIEGVLDLQDTKISEIMRPRVEVVAIEANSTMMDLYMLHQETKYSRIPVYSGEIDRISGVVLIKELLDFVQEPEKLTSVLVADETESTYFVPETMSVWNVLEEASRIWRLHMAIVVDEYGGTAGVVTLEDILEEVVGEIYDEKEDDDFREEEHYINVNEDGTFTIHGMADLEDVCTSLAFQEV 966
            QVLNKDITRVLTTILMATTVCTIYNAALFTNLAIQMFGSAGLAYATAALTVTTLFFGELVPKALGVNNAEVVARRVLPIIIVLSVVLNPVAKTFTLISTLMLSMLGFKSTETGRVSEEELRLIVTGAKMSGGIESQEGMMIEGVLDLQDTKISEIMRPRVEVVAIEANSTMMDLYMLHQETKYSRIPVYSGEIDRISGVVLIKELLDFVQEPEKL+SVLVADETESTYFVPETMSVWNVLEE  R  RLHMAIVVDEYGGTAGVVTLEDILEEVVGEIYDEKEDDDFREEEHYINVNEDGTFTIHGMADLEDVCTSLAFQEV
Sbjct:  184 QVLNKDITRVLTTILMATTVCTIYNAALFTNLAIQMFGSAGLAYATAALTVTTLFFGELVPKALGVNNAEVVARRVLPIIIVLSVVLNPVAKTFTLISTLMLSMLGFKSTETGRVSEEELRLIVTGAKMSGGIESQEGMMIEGVLDLQDTKISEIMRPRVEVVAIEANSTMMDLYMLHQETKYSRIPVYSGEIDRISGVVLIKELLDFVQEPEKLSSVLVADETESTYFVPETMSVWNVLEEMRRR-RLHMAIVVDEYGGTAGVVTLEDILEEVVGEIYDEKEDDDFREEEHYINVNEDGTFTIHGMADLEDVCTSLAFQEV 504          
BLAST of mRNA_Ecto-sp13_S_contig8555.19959.1 vs. uniprot
Match: A0A6H5JI81_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI81_9PHAE)

HSP 1 Score: 571 bits (1472), Expect = 1.620e-197
Identity = 313/322 (97.20%), Postives = 315/322 (97.83%), Query Frame = 1
Query:    1 QVLNKDITRVLTTILMATTVCTIYNAALFTNLAIQMFGSAGLAYATAALTVTTLFFGELVPKALGVNNAEVVARRVLPIIIVLSVVLNPVAKTFTLISTLMLSMLGFKSTETGRVSEEELRLIVTGAKMSGGIESQEGMMIEGVLDLQDTKISEIMRPRVEVVAIEANSTMMDLYMLHQETKYSRIPVYSGEIDRISGVVLIKELLDFVQEPEKLTSVLVADETESTYFVPETMSVWNVLEEASRIWRLHMAIVVDEYGGTAGVVTLEDILEEVVGEIYDEKEDDDFREEEHYINVNEDGTFTIHGMADLEDVCTSLAFQEV 966
            QVLNKDITRVLTTILMATTVCTIYNAALFTNLAIQMFGSAGLAYATAALTVTTLFFGELVPKALGVNNAEVVARRVLPIIIVLSVVLNPVAKTFTLISTLMLSMLGFKSTETGRVSEEELRLIVTGAKMSGGIESQEGMMIEGVLDLQDTKISEIMRPRVEVVAIEANSTMMDLYMLHQETKYSRIPVYSGEIDRISGVVLIKELLDFVQEPEKL+SVLVADETESTYFVPETMSVWN+     R  RLHMAIVVDEYGGTAGVVTLEDILEEVVGEIYDEKEDDDFREEEHYINVNEDGTFTIHGMADLEDVCTSLAFQEV
Sbjct:  349 QVLNKDITRVLTTILMATTVCTIYNAALFTNLAIQMFGSAGLAYATAALTVTTLFFGELVPKALGVNNAEVVARRVLPIIIVLSVVLNPVAKTFTLISTLMLSMLGFKSTETGRVSEEELRLIVTGAKMSGGIESQEGMMIEGVLDLQDTKISEIMRPRVEVVAIEANSTMMDLYMLHQETKYSRIPVYSGEIDRISGVVLIKELLDFVQEPEKLSSVLVADETESTYFVPETMSVWNM-----RRRRLHMAIVVDEYGGTAGVVTLEDILEEVVGEIYDEKEDDDFREEEHYINVNEDGTFTIHGMADLEDVCTSLAFQEV 665          
BLAST of mRNA_Ecto-sp13_S_contig8555.19959.1 vs. uniprot
Match: A0A836CE63_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE63_9STRA)

HSP 1 Score: 417 bits (1072), Expect = 3.740e-141
Identity = 225/322 (69.88%), Postives = 270/322 (83.85%), Query Frame = 1
Query:    1 QVLNKDITRVLTTILMATTVCTIYNAALFTNLAIQMFGSAGLAYATAALTVTTLFFGELVPKALGVNNAEVVARRVLPIIIVLSVVLNPVAKTFTLISTLMLSMLGFKSTETGRVSEEELRLIVTGAKMSGGIESQEGMMIEGVLDLQDTKISEIMRPRVEVVAIEANSTMMDLYMLHQETKYSRIPVYSGEIDRISGVVLIKELLDFVQEPEKLTSVLVADETESTYFVPETMSVWNVLEEASRIWRLHMAIVVDEYGGTAGVVTLEDILEEVVGEIYDEKEDDDFREEEHYINVNEDGTFTIHGMADLEDVCTSLAFQEV 966
            +VLN+DITRVLTTIL+ATT+C+IY+AALFTNLAIQ+FG+ GLAYATAALT  TLFFGEL+PKALGVNNAE+VARR++PII +++V L+P+ K F+ +S L+L+++GFKST    VSEEELRLIV+GAK SGGIE +E  M+E VLDLQDTK++++MRPR EVVAIE+NSTM  LY +  ET YSRIPV+ G IDRI GVVL KELLDF+ +P +L +V V +  E TYFVPETM VWNVLEE  R  RLHMAIVVDEYGGTAG+VTLEDI+EEVVGEIYDE EDDD+  EE+YI  N DG+F IHGMADLE VCT+L F +V
Sbjct:   91 RVLNQDITRVLTTILVATTICSIYSAALFTNLAIQLFGAKGLAYATAALTTVTLFFGELMPKALGVNNAEMVARRMVPIINLMAVFLSPIGKGFSWVSKLVLTLMGFKSTHGDAVSEEELRLIVSGAKQSGGIEREEASMVESVLDLQDTKVTKVMRPRTEVVAIESNSTMASLYTIVNETMYSRIPVFEGAIDRIIGVVLSKELLDFIPDPSQLETVAVRERMEPTYFVPETMPVWNVLEEM-RKRRLHMAIVVDEYGGTAGIVTLEDIIEEVVGEIYDE-EDDDYTVEENYIIANGDGSFNIHGMADLEQVCTALDFPQV 410          
BLAST of mRNA_Ecto-sp13_S_contig8555.19959.1 vs. uniprot
Match: A0A7S1TRQ1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TRQ1_9STRA)

HSP 1 Score: 348 bits (893), Expect = 1.400e-112
Identity = 193/317 (60.88%), Postives = 245/317 (77.29%), Query Frame = 1
Query:    4 VLNKDITRVLTTILMATTVCTIYNAALFTNLAIQMFGSAGLAYATAALTVTTLFFGELVPKALGVNNAEVVARRVLPIIIVLSVVLNPVAKTFTLISTLMLSMLGFKSTETGRVSEEELRLIVTGAKMSGGIESQEGMMIEGVLDLQDTKISEIMRPRVEVVAIEANSTMMDLYMLHQETKYSRIPVYSGEIDRISGVVLIKELLDFVQEPEKLTSVLVADETESTYFVPETMSVWNVLEEASRIWRLHMAIVVDEYGGTAGVVTLEDILEEVVGEIYDEKEDDDFREEEHYINV-NEDGTFTIHGMADLEDVCTSL 951
            VL+KDITRVLTT+L+ TT CTIY+AALFT +A +  G AG + ATA LTV T+FFGEL+PKALGV +AEVVARR++P I  ++VV+ P+ K  +  ++ +L +LGF +++ G VSEEELRLIV+GAK SGGIE++EG MIE VLDL D ++SE+MRPRVE+VA++ N T+  L  +  +TKYSR PVY GEIDRI GV L K+LL  VQE   LT   + D T+ TYFVPE MSVW+VLEE  R  RLHMA+VVDEYGGTAG+VTLEDILEEVVGEIYDE+++ + R+EE  I V +E G++ + G ADLEDV  +L
Sbjct:  200 VLSKDITRVLTTVLLMTTACTIYSAALFTRMATEALGPAGTSLATAILTVITVFFGELLPKALGVGSAEVVARRMVPPISAVAVVIAPLGKLLSTSASGLLRLLGFDASDKGAVSEEELRLIVSGAKASGGIETEEGAMIENVLDLADKRVSEVMRPRVELVALDRNETLDVLLSVFNDTKYSRYPVYEGEIDRIVGVALAKDLLQMVQERRSLTDTKIGDITQPTYFVPEAMSVWSVLEEMRRR-RLHMAVVVDEYGGTAGLVTLEDILEEVVGEIYDEEDEQESRDEEDMITVEDESGSYLVKGSADLEDVAIAL 515          
BLAST of mRNA_Ecto-sp13_S_contig8555.19959.1 vs. uniprot
Match: A0A7R9U4U4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U4U4_9STRA)

HSP 1 Score: 341 bits (874), Expect = 4.700e-110
Identity = 192/317 (60.57%), Postives = 241/317 (76.03%), Query Frame = 1
Query:    4 VLNKDITRVLTTILMATTVCTIYNAALFTNLAIQMFGSAGLAYATAALTVTTLFFGELVPKALGVNNAEVVARRVLPIIIVLSVVLNPVAKTFTLISTLMLSMLGFKSTETGRVSEEELRLIVTGAKMSGGIESQEGMMIEGVLDLQDTKISEIMRPRVEVVAIEANSTMMDLYMLHQETKYSRIPVYSGEIDRISGVVLIKELLDFVQEPEKLTSVLVADETESTYFVPETMSVWNVLEEASRIWRLHMAIVVDEYGGTAGVVTLEDILEEVVGEIYDEKEDDDFREEEHYINVNED-GTFTIHGMADLEDVCTSL 951
            VL+KDITRVL+TIL+ TT CTIY+AALFT++A    G+ G A AT ALTV T+FFGEL+PKALGV +AE+VARR++P I +L+VV+ P+ K  ++ ++ +L +LGF     G VSEEELRLIV+GAK SGGIE++EG MIE VLDL D ++SE+MRPRVE+VA++ N T+ DL ++   TKYSR PVY GEIDR+ GV L K+LL  VQE   LT   V   T+ TYFVPE M VW+VLEE  R  RLHMAIVVDEYGGTAG+VTLEDILEEVVGEIYDE+++ + REEE  I  + + G++ I G A+LE V  SL
Sbjct:  207 VLSKDITRVLSTILVMTTACTIYSAALFTSMATTALGAKGTAIATGALTVITVFFGELLPKALGVGSAEIVARRMVPPISLLAVVIAPLGKLLSVSASAILRLLGFDGKVEGAVSEEELRLIVSGAKASGGIETEEGAMIENVLDLADKRVSEVMRPRVELVALDQNDTLADLLLVFNATKYSRYPVYEGEIDRVIGVALAKDLLQMVQEGRSLTETKVEQITQGTYFVPEAMPVWSVLEEMRRR-RLHMAIVVDEYGGTAGLVTLEDILEEVVGEIYDEEDEQESREEEDMITPDTELGSYIIKGSAELEMVAVSL 522          
BLAST of mRNA_Ecto-sp13_S_contig8555.19959.1 vs. uniprot
Match: A0A7S2BAT8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BAT8_9STRA)

HSP 1 Score: 313 bits (803), Expect = 9.410e-100
Identity = 182/317 (57.41%), Postives = 234/317 (73.82%), Query Frame = 1
Query:    7 LNKDITRVLTTILMATTVCTIYNAALFTNLAIQMFGSAGLAYATAALTVTTLFFGELVPKALGVNNAEVVARRVLPIIIVLSVVLNPVAKTFTLISTLMLSMLGFKSTETGRVSEEELRLIVTGAKMSGGIESQEGMMIEGVLDLQDTKISEIMRPRVEVVAIEANSTMMDLYMLHQETKYSRIPVYSGEIDRISGVVLIKELLDFVQEPEKLTSVLVADETESTYFVPETMSVWNVLEEASRIWRLHMAIVVDEYGGTAGVVTLEDILEEVVGEIYDEKEDDDFREEEHYINVN--EDGTFTIHGMADLEDVCTSL 951
            L  DITRVLTTIL+ TT CT+ +  LFT +A     S  +A AT  LT+ T+FFGEL+PKALGV+NAEVVAR ++P + V+  V +P A  F+ ++  +L + GF + +TG VSEEELRL++ GA+ SGGIE++E  M+EGVLDLQDTK+SE+MR RV+V A+EAN+T+ DL +L  +TKYSRIPVY GE+D+I GVV+ K++L +V  P+ L    V++  E TYFVPETM V  VLEE  R  RLHMAIVVDEYGGTAG+VTLEDILEEVVGEIYDE   D F EE    N+   +DG+F + G+A+LE VC +L
Sbjct:  164 LQDDITRVLTTILVLTTCCTVTSTVLFTQIASCF--SLNVAKATTILTLITIFFGELIPKALGVSNAEVVARFLVPPLTVVCTVFSPFALAFSWLAKSVLKIFGFNTQDTGFVSEEELRLLIMGARESGGIETEEAKMVEGVLDLQDTKVSEVMRHRVDVEALEANATLSDLLVLLNKTKYSRIPVYDGEVDKICGVVIAKDMLKYVGNPDSLDGHTVSEIMEPTYFVPETMVVQRVLEEM-RKRRLHMAIVVDEYGGTAGLVTLEDILEEVVGEIYDEG--DVFEEEAMEDNIMPLDDGSFEVRGIAELESVCLAL 475          
BLAST of mRNA_Ecto-sp13_S_contig8555.19959.1 vs. uniprot
Match: W7TVL3_9STRA (Hemolysin-related protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVL3_9STRA)

HSP 1 Score: 319 bits (817), Expect = 1.300e-99
Identity = 176/323 (54.49%), Postives = 243/323 (75.23%), Query Frame = 1
Query:    1 QVLNKDITRVLTTILMATTVCTIYNAALFTNLAIQMFGSAGLAYATAALTVTTLFFGELVPKALGVNNAEVVARRVLPIIIVLSVVLNPVAKTFTLISTLMLSMLGFKSTETGRVSEEELRLIVTGAKMSGGIESQEGMMIEGVLDLQDTKISEIMRPRVEVVAIEANSTMMDLYMLHQETKYSRIPVYSGEIDRISGVVLIKELLDFVQEPEKLTSVLVADET--ESTYFVPETMSVWNVLEEASRIWRLHMAIVVDEYGGTAGVVTLEDILEEVVGEIYDEKEDDDFREEEHYINVNEDGTFTIHGMADLEDVCTSLAFQE 963
            ++L +DITRVLTTIL+ATT CTIY+AALFTNLA+++ G+ G+AY+T  LTV TL FGEL+PK+LGV+NAE+VAR ++P I +L+VVL+PV K  ++ + L+L +LG K+ +  RVSE++LRL+V GA+ SGGIE+QEG MI  VL++Q+ ++SE M PRV+V A++  S+++ L  L Q T+YSRIPV+ GEID+I GV + K+LL++V   E+   + +  ET  + TYFVPETM++W   +E  R  R+HMAIVVDEYGGTAGV+TLEDI EEV GEIYDE++ ++    E  I + ED  + I G ADLEDV T L  ++
Sbjct:  353 RILERDITRVLTTILVATTACTIYSAALFTNLAMELLGARGVAYSTVGLTVVTLVFGELIPKSLGVSNAEMVARIMVPPINLLAVVLSPVGKVLSMFAKLVLRLLGIKADDDERVSEDQLRLLVAGAQKSGGIEAQEGQMINQVLNMQEKRVSEAMCPRVDVEALDKRSSLLQLQELFQRTRYSRIPVFDGEIDKIIGVAMSKDLLEYVFSKEQSNVLDLPVETIMQPTYFVPETMTIWTCFQEM-RQRRVHMAIVVDEYGGTAGVITLEDIQEEVFGEIYDEEDIEEDHHGEDLIKMIEDDVYLIQGNADLEDVWTELGMED 674          
BLAST of mRNA_Ecto-sp13_S_contig8555.19959.1 vs. uniprot
Match: F0YAJ4_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAJ4_AURAN)

HSP 1 Score: 290 bits (743), Expect = 6.610e-93
Identity = 180/328 (54.88%), Postives = 228/328 (69.51%), Query Frame = 1
Query:    7 LNKDITRVLTTILMATTVCTIYNAALFTNLAIQMFGSAG--LAYATAALTVTTLFFGELVPKALGVNNAEVVARRVLPIIIVLSVVLNPVAKTFTLISTLMLSMLGFKSTETGR--VSEEELRLIVTGAKMSGGIESQEGMMIEGVLDLQDTKISEIMRPRVEVVAIEANSTMMDLYMLHQETKYSRIPVYSGEIDRISGVVLIKELLDFV----QEPEKLTSVLVADETESTYFVPETMSVWNVLEEASRIWRLHMAIVVDEYGGTAGVVTLEDILEEVVGEIYDEKEDDDFREEEHYINVNEDG-TFTIHGMADLEDVCTSLAFQE 963
            L++DITRVLTTIL+ATT C I + ALF ++A+ + G +   LAYATA LT  TLFFGEL+PKA+GVNNAE  AR + P I +++ +L PVA  F  +S   L  +G    E     VSEEELRLI+ GA  SGGIE+ EG MIEGVLDLQDT+++EIM+PRV V A+E N+TM++L  L   T +SR+PVY  EID+I GVV  K+LL F+     + + +  VLVA+  E TYFVPETM  W VLEE  R  RLHMAIVVDEYGGTAG+VTLEDILE VVGEIYDE +D + R+   Y+ +  D  T+ I G A L+D+   L  ++
Sbjct:    3 LDRDITRVLTTILVATTCCNIASTALFADMAVSVCGGSARKLAYATAMLTAGTLFFGELLPKAIGVNNAERTARLLAPPINIMTKILGPVAIGFAGLSKKTLKFVGLIKNEGSAEAVSEEELRLIIGGASESGGIETNEGEMIEGVLDLQDTRVAEIMQPRVNVKALERNATMLELLRLVNATGHSRVPVYDDEIDKIVGVVNAKKLLKFMVKKDADAQPIDDVLVAEFVEETYFVPETMLAWKVLEEMRRR-RLHMAIVVDEYGGTAGMVTLEDILEVVVGEIYDE-DDTEERDLSEYVTLRADNRTYDIRGDAALDDLVEVLVLRD 328          
BLAST of mRNA_Ecto-sp13_S_contig8555.19959.1 vs. uniprot
Match: A0A7S4B6R2_CHRCT (Hypothetical protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B6R2_CHRCT)

HSP 1 Score: 289 bits (740), Expect = 4.180e-90
Identity = 161/320 (50.31%), Postives = 226/320 (70.62%), Query Frame = 1
Query:    7 LNKDITRVLTTILMATTVCTIYNAALFTNLAIQMFGSAGLAYATAALTVTTLFFGELVPKALGVNNAEVVARRVLPIIIVLSVVLNPVAKTFTLISTLMLSMLGF-KSTETGRVSEEELRLIVTGAKMSGGIESQEGMMIEGVLDLQDTKISEIMRPRVEVVAIEANSTMMDLYMLHQETKYSRIPVYSGEIDRISGVVLIKELLDFVQEP-EKLTSVLVADETESTYFVPETMSVWNVLEEASRIWRLHMAIVVDEYGGTAGVVTLEDILEEVVGEIYDEKEDDDFREEEHYINVNEDGTFTIHGMADLEDVCTSLAFQ 960
            L KD+T+VL+T+L+  T CT+Y  AL T++AI +FG  G+ YAT ALT+ TLFFGE++PK+L V NAE VAR  LP+I V+SVV  P+ +  ++ +  +LS+LG   + E   V+E ELR+++ GAK SG +E  E  MIEGVLDL  + + +IMRPRV+V+ I+ N +++DL  L +E KYSR+PVY+G ID I+G+V  +EL+D+   P E L  + V+   E T FVPE+MS  N L+   R  RLHM +VVDEYGGT+G++TLEDILE +VG+IYDE +D++ +EE   I  NEDGT+++ GMA+LE  C  L  +
Sbjct:  196 LQKDVTKVLSTVLVGVTFCTVYGTALATDIAIHLFGEMGIGYATVALTLVTLFFGEILPKSLAVANAEGVARATLPLINVISVVFYPLGRVISMATQGLLSLLGVGHAGEEQTVTEPELRMMIMGAKQSGTVELYEQDMIEGVLDLDQSTVEQIMRPRVDVIGIDRNDSLLDLLDLTREWKYSRVPVYNGTIDEINGIVFTRELIDYAALPREDLRKLPVSTIMEETAFVPESMSAMNALKLMRR-QRLHMLVVVDEYGGTSGIITLEDILETLVGKIYDEDDDEEVQEEVQSIMQNEDGTWSLDGMAELEVACERLTLE 514          
BLAST of mRNA_Ecto-sp13_S_contig8555.19959.1 vs. uniprot
Match: A0A7S1HDC6_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HDC6_HEMAN)

HSP 1 Score: 290 bits (741), Expect = 1.230e-89
Identity = 168/317 (53.00%), Postives = 223/317 (70.35%), Query Frame = 1
Query:    1 QVLNKDITRVLTTILMATTVCTIYNAALFTNLAIQMFGSAGLAYATAALTVTTLFFGELVPKALGVNNAEVVARRVLPIIIVLSVVLNPVAKTFTLISTLMLSMLGFKSTETGRVSEEELRLIVTGAKMSGGIESQEGMMIEGVLDLQDTKISEIMRPRVEVVAIEANSTMMDLYMLHQETKYSRIPVYSGEIDRISGVVLIKELLDFVQEPEKLTSVLVADETESTYFVPETMSVWNVLEEASRIWRLHMAIVVDEYGGTAGVVTLEDILEEVVGEIYDEKEDDDFREEEHYINVNEDGTFTIHGMADLEDVCTSL 951
            ++L+KDIT+ LT IL+ TT  TIY+AAL T++A Q  G   +  AT  LT  TL  GE++PKAL V+ AE VAR ++PII +L++++ P+ K   L S  ML M+G + ++   VSEEELR+IV GAK+SG ++S+E  MI+ VLDLQDT IS+IMRPRVEVVA+EA++ +         T YSR P++   ID I G+VL K L+D++  P  L S  VAD  +  Y+VP++M+VWNVLEE  R  R+HMAIVVDEYGGTAG+VTLEDILEEV+GEIYDE + D+  +EE  I    DG+FTI G A LE+V  +L
Sbjct:  240 RLLDKDITKFLTAILICTTTATIYSAALVTDMAAQYGGEKMVTAATLWLTGLTLVAGEIIPKALAVSQAERVARIMVPIINILAIMVYPIGKLMELTSKAMLLMMGVQESDESSVSEEELRMIVMGAKVSGALKSEEQEMIDSVLDLQDTMISDIMRPRVEVVALEASTDISTFVGAVSSTGYSRFPIFEDNIDNIIGMVLAKSLIDYLDAPAALDSATVADIMDPAYYVPQSMAVWNVLEEMRRR-RIHMAIVVDEYGGTAGIVTLEDILEEVIGEIYDEDDIDELVKEESSIFKEADGSFTIDGFAVLEEVVKAL 555          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8555.19959.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIB4_ECTSI1.470e-20398.45Hemolysin-related protein n=1 Tax=Ectocarpus silic... [more]
A0A6H5JI81_9PHAE1.620e-19797.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CE63_9STRA3.740e-14169.88Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1TRQ1_9STRA1.400e-11260.88Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7R9U4U4_9STRA4.700e-11060.57Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2BAT8_9STRA9.410e-10057.41Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
W7TVL3_9STRA1.300e-9954.49Hemolysin-related protein n=2 Tax=Monodopsidaceae ... [more]
F0YAJ4_AURAN6.610e-9354.88Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A7S4B6R2_CHRCT4.180e-9050.31Hypothetical protein n=2 Tax=Chrysotila carterae T... [more]
A0A7S1HDC6_HEMAN1.230e-8953.00Hypothetical protein (Fragment) n=2 Tax=Hemiselmis... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8555contigEcto-sp13_S_contig8555:1293..6345 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score581.6
Seed ortholog evalue2.2e-163
Seed eggNOG ortholog2880.D7FIB4
Model size966
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009526,GO:0009536,GO:0009941,GO:0031967,GO:0031975,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464
Exons8
EggNOG free text desc.magnesium ion homeostasis
EggNOG OGsCOG1253@1,KOG2118@2759
Cds size966
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8555.19959.1prot_Ecto-sp13_S_contig8555.19959.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig8555 1293..6345 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464125.821446-CDS-Ecto-sp13_S_contig8555:1292..13971681464125.821446-CDS-Ecto-sp13_S_contig8555:1292..1397Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8555 1293..1397 +
1681464125.8464031-CDS-Ecto-sp13_S_contig8555:1748..19401681464125.8464031-CDS-Ecto-sp13_S_contig8555:1748..1940Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8555 1749..1940 +
1681464125.8631504-CDS-Ecto-sp13_S_contig8555:2135..22821681464125.8631504-CDS-Ecto-sp13_S_contig8555:2135..2282Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8555 2136..2282 +
1681464125.8779442-CDS-Ecto-sp13_S_contig8555:3078..31711681464125.8779442-CDS-Ecto-sp13_S_contig8555:3078..3171Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8555 3079..3171 +
1681464125.8888345-CDS-Ecto-sp13_S_contig8555:3847..39401681464125.8888345-CDS-Ecto-sp13_S_contig8555:3847..3940Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8555 3848..3940 +
1681464125.9007013-CDS-Ecto-sp13_S_contig8555:4370..44801681464125.9007013-CDS-Ecto-sp13_S_contig8555:4370..4480Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8555 4371..4480 +
1681464125.909809-CDS-Ecto-sp13_S_contig8555:5517..56711681464125.909809-CDS-Ecto-sp13_S_contig8555:5517..5671Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8555 5518..5671 +
1681464125.9189675-CDS-Ecto-sp13_S_contig8555:6273..63451681464125.9189675-CDS-Ecto-sp13_S_contig8555:6273..6345Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8555 6274..6345 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig8555.19959.1

>prot_Ecto-sp13_S_contig8555.19959.1 ID=prot_Ecto-sp13_S_contig8555.19959.1|Name=mRNA_Ecto-sp13_S_contig8555.19959.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=322bp
QVLNKDITRVLTTILMATTVCTIYNAALFTNLAIQMFGSAGLAYATAALT
VTTLFFGELVPKALGVNNAEVVARRVLPIIIVLSVVLNPVAKTFTLISTL
MLSMLGFKSTETGRVSEEELRLIVTGAKMSGGIESQEGMMIEGVLDLQDT
KISEIMRPRVEVVAIEANSTMMDLYMLHQETKYSRIPVYSGEIDRISGVV
LIKELLDFVQEPEKLTSVLVADETESTYFVPETMSVWNVLEEASRIWRLH
MAIVVDEYGGTAGVVTLEDILEEVVGEIYDEKEDDDFREEEHYINVNEDG
TFTIHGMADLEDVCTSLAFQEV
back to top

mRNA from alignment at Ecto-sp13_S_contig8555:1293..6345+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig8555.19959.1 ID=mRNA_Ecto-sp13_S_contig8555.19959.1|Name=mRNA_Ecto-sp13_S_contig8555.19959.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5053bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8555:1293..6345+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGTACTGAACAAGGACATCACCAGGGTGCTGACGACGATCCTCATGGC CACGACGGTGTGCACGATCTACAATGCCGCGCTCTTCACAAACCTCGCCA TACAGGTACAGAAGTGTATGCTGTACGTGAGATCATCCCGGCATTTGGTT GGACGGGTGTGTTGGACGGAACGCGGTCGTCGGTCGATCTGCAGCGTTCA TGTACATTAACCTGTCCGATTTGTTATGTCAGTTTTCATACTCGCAAGTT CGGACGGGTAACACATGTCGTGCCCAGCAGTATTTGGGCACGCTATCGTG ACGCCGGCAGTTGTGATATTTTCCTGTCTCCTTTTGTGGATGCCTTTGTT GTTTCTGCTTCACCCATGGCAAGCAGCCCATGGGGTAGTGCTTAGGTTCA ACCCACAAGGATTTGCCTGCTTTCCTGTCCCTTGTTCTAACGCGTGTTAT TAATAGATGTTCGGGTCGGCGGGACTGGCATACGCCACCGCGGCCCTCAC GGTCACGACGCTGTTCTTCGGGGAGCTGGTGCCCAAGGCCCTGGGCGTCA ACAACGCGGAGGTCGTGGCGCGGCGGGTGCTACCCATCATCATCGTGCTC TCCGTGGTCCTCAACCCGGTCGCCAAAACCTTCACGCTTATCTCCACGGT ACGGCTTCTCGGCATTTGTGTGTGTACGTGCTCTGATGTTTCAAGCGCCA CCCACCCCTTCCAATCGTAGATACAGCCACGACGGCCTGAAAAGGTAGAT TGTGTGTACACCGGTTTTTTGCCACTATGGTCGATTTCGTACATCATCGT CCTAGCCGAATGATTCGCCGCTCTGTCCCGTCCCGTCCCACAGCTGATGC TGTCGATGCTCGGGTTCAAGTCCACCGAGACCGGGAGAGTGTCCGAGGAG GAGCTGCGACTTATCGTAACGGGAGCCAAGATGAGCGGCGGCATCGAGAG CCAGGAAGGGATGATGATCGAGGGCGTGCTCGACCTACAGGTGGCCCATG ACCCACCGACCTATAAAAAGCGGCCTTTGTTCTTTTTTTCTTTGAAGGTT TCGCCGCATTGCTAGCGTAGGTTGCATAAGATTCCACACCCCCTGGACCG ACTTTCAAAGCTCGAATACTCCACGACCAAGAGGATGCCGAAGGCAAACG ATAAGTGTTCGGAAGGTTCTCGACGGTACGTTTCCAACTCCGCCATTTTC GGCACCGTCACTGCTTTCCCAGTCCCAGCCGAGAAATCAAGCTTTTGGAA ATCGGCCGAGGGGGTGTGATATCTTACGCAACCTACGGTATGTACTTCAA CATCCACGAAGTACTCCTTAAGTTTTTTGTTTCAGCTTGGTGGCTCGTCC TGCCCCGTTGCTTCGCTGACTGTTGCGTATCTCGCGCACTTCTGGTGGCT GCTTTCATGCAGCGCTTGAGCTGGTGATGCGAGCGAATTGCTTGCCAAGC TCCGGCTTTGTTTTTGTGGTCAGGTGGACTTGAAACAGCCCGCCCTCACG GCTTGCTTTGTGGGCGCCGATGTTTGTGCGTCTTTGTGTGTTTCCGGTTG TGTTTTTCGTTTTAAATATGCTTGGTGTGTCGCGATCCGATAGCCTTCGA CACTCGACACAGCAGTCTGATGTGACTTGACATAATTGACATCATCTACC GGCGCGGGAAGAATAAACTAACAAACGACGCTGCTGTTTGTTCGTGTGGT GTGATGTTGTTGCAACAACCTGTCCGCGCCGGCCGGGGGACGGATGGGTG TGGATGGATGGATGTGCTGCCCTGACCACCGTCCAGGACACTAAAATCTC GGAGATCATGCGGCCGAGGGTAGAGGTGGTGGCGATCGAGGCGAACTCGA CGATGATGGATCTCTACATGCTCCACCAGGTTAAAACGTATTTTGTGGTG GGATGGGCTAGTGCGGCAGGTGCTTTTGTCATTGACGGCGATACACATCG CCGCCTGTTTTTTGTCAAAAGCGAATTGTGCTCTTGATGTTCCAGTATCA TGGCCCGGATGTAATGTGTTGCCAATGTACAGTGGTTCAGTAGTGGCAAC CGATCTTATTCCGTCCGTCCATGGTAGGACATGTATTCGCTGTACCAGGG CGTAGAGTACGATGGCACGTTGGTGTTGTTGTAATTGTGAACTCGGCGAC ACAACAAGGCGGTGTTCTGACGTCATCACGGCACAGCAGTTTCTGCGTGT CACTACAGGGTGCGAGGATCAAGGCTCGAAAGCTCGTCCGCCTTAAATAT ATTTTGTATAAGCGTACACGATGCCGAACCACAGGTGTCACGTTGAATTG AACCCCAAGCTTTCTTCTCTTCGCTCTCGTATTCGTTCATGTTCACCATT CTCCGCCTTGATTGTTCTCTTAAACCTGCGGAGTCTGTCTGTGTGTTTCG GTCCCTTTCACCACGGCCCTGTCTTACCTCGCGTAGGTGCTGCAGTACCC TCTGACTCTCTGCTCAATCTGCTTTGTCCTCTTCGTCCCCGCTCACCCTT GCCGTCGGGCGTGCAAACGTTGACGACCCCCCCCCTTCGACTATGGAAAC CCCAGGAGACGAAATACAGCCGAATCCCTGTGTACAGCGGAGAGATCGAC CGCATCTCCGGCGTGGTTCTCATCAAAGAATTGCTCGACTTTGTCCAGGT GAAAGTGAAAACGTCGTACTCTTGCTGGCGTAGGCGTGATGAGCTGTTGC GACAGTAGGCGCCCCGTTCCTCCTAAATCATTTTCTTCGCGAGCTTGCTC TACAGCAGCTAGTAGAGCGTTTTTTTGTGCATTCCTCTCTAGGCGCTCAG CTTTAGGCAACTGTGATCCTGGGGCCAGGCACTCGCGCCAGCTAGAGTAT AAGCCAAGATCGTCCGGCTTTAAAGACCCTGTTCCATCGTTCGCGGGTGC CTTGAGCAAGCTGGAGATGGTGAACCGTGCAAACAGTCGGTACAAGGCCT CAGTATCTGCTGTGATTGTGGCAGGACTCGCACGTCTGATCTCTCACCTC TTCGTCTGCAACGTGGATTGGCCGGCCTGTTGACTTGTGGGCACTTTTCG ATGTAATGTGTTGTGCGATGAATTGCAGGAGCCCGAGAAACTGACGTCTG TGCTAGTGGCCGACGAGACGGAGAGCACCTACTTCGTGCCGGAGACGATG AGCGTTTGGAACGTTCTTGAGGAGGCGAGTCGGATTTGGTTGTTGATTGA TCACCCTTCGTGTTTGTTGTTGTTGTCATGCGGTCCGCTTGGTGTCGTTT GGCGCGATGTTTTCCTGGCCTGGTATCAGGTCTCGTGTTGGTGTCATGTT GTGTCTTTTTTTGTTCATGTGTGTACTCCAAATGATCATGCTGAGGCTGT TCAACCAGTATGCCGTGATTGCGAGGATGCAATGTCAACAAGTGAAAGGA GGGATAAAACGCGAATGGTGCAATGTGGAAGAACGAGAGGTGTGTTGAGA TATTTGGTTGTTGTTGCTGATGTTGTGTTGTGTGTGGCCATTTGTCCTGC TTTTGTGTTGCAATATTTGTTGTCTAAATGCCCGCACCGCCTTTAATACC TACTCCGATCGCAAGGATGTCAAAGAATGAAAGGAAGAGATTGAACGCAA AACGCGTCGTGTGAACCGCAAGAACTGGCTGAGCGATCAACACCCCAACG CCCACAGAACATAGTGGAATGTCTCGCCTCTTTTTCTGCGACTTTCGGTC GTGTACCGCAGTCCGGTCTACACGCCTCGTCAATGCTTGCACCTCGTTGT TGCTTGTATGAAACGGACATGGATCTCTGTTGCCCCTCTCAAGCGGCTAG CGAGTCAATCGTCTCTGTCATCGAACCGTAGAGCCTCGTTATCCCGAAAC CTCATCTACCATTCACTTTCCCGCTCTGCTTCTGCGCGCGATTTGACTCC CCCGGCGCCGCTCACTCGTCTCACACGGAACACTGGGGAACATTGTTTGA CCGCTGCTGATGTTCCGATGCATGGTTATTGCGCGTTGTTTTTTCTCTCT CTCGTTCGGCCCTTGCGCTCCCCCCTCCCCCTGTGCGAATAATGCCCCGT GTTCTCGAGGAAACATGTTCAATGGTCTTACAACAAAGGCATGCAGAACA TGAGTACCCGCTGGGGAAAAAGGCATTGTCCTCTCGAGGACGCGTTGTTA ATGGTCGATCAGTTAAGGCATGCAAAACATTAGTACCCCCCCGCCCACGC CCCCCCTGCCGCAGATGCGCCGCAGGCGTTTGCACATGGCCATCGTGGTG GACGAGTACGGGGGTACTGCCGGTGTGGTGACGCTGGAGGACATCCTGGA GGAAGTGGTGGGTGAGATCTACGACGAGAAGGAAGATGACGACTTCAGAG AAGAGGAGCACTACATCAACGTCAACGAGGTATGCACACGTTGCTGATAC GTGGGGAGGGGGTGTCCTTACACTGTACTAATGTAAACGAATGCCGTAGT CGGTAGACCATACACGTGAACCTGGACAATGCCTGGACGGAGAGAAAGGC CGGGTTTTCGCCGGCCCGGGAGCTACGTTTCACATTGATGAACGAGAAGC TGGTAATCACCCTGGTGTTTGCTGACCCTTACCAGATTATGTCGTGGCAG TTGCTTGGAAGGGGGGGTTAATTAGTCTGTTTGCTGTGGTTTTGCGATGT GGGTGGGTAGGATATTAGTGCCGAAAGGAGCACGGATGTGTAGGCCTCCG TTTGTGTTATTTTCTTCTTTTTTGTGTGTCTTTGGTGGTCGCCCCCATAG ACTTCAGGAGTTGTAGACGGCGATGAACGTGTGGCGATAGTCTCAATGTT CCTTGTGTTCCAACCGACAGCGTGTTTCCGATAGGCTTCCTTTTATTAGT TTTTCGTCCACCCACGCTTTCTCTCTCTTTTTCAACAATTCAGTCGACAT GTGTGAATCACCCCCGTGTCGACGGCGATGTGTCATGTGGTTGTTTTTGT GTTCATGTCCCTTTCGGTGTCTTGCTTGCAGGATGGAACCTTCACGATTC ATGGCATGGCGGACCTCGAGGATGTATGCACTTCGCTCGCTTTCCAGGAG GTA
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8555:1293..6345+

>mRNA_Ecto-sp13_S_contig8555.19959.1 ID=mRNA_Ecto-sp13_S_contig8555.19959.1|Name=mRNA_Ecto-sp13_S_contig8555.19959.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=966bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8555:1293..6345+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGTACTGAACAAGGACATCACCAGGGTGCTGACGACGATCCTCATGGC
CACGACGGTGTGCACGATCTACAATGCCGCGCTCTTCACAAACCTCGCCA
TACAGATGTTCGGGTCGGCGGGACTGGCATACGCCACCGCGGCCCTCACG
GTCACGACGCTGTTCTTCGGGGAGCTGGTGCCCAAGGCCCTGGGCGTCAA
CAACGCGGAGGTCGTGGCGCGGCGGGTGCTACCCATCATCATCGTGCTCT
CCGTGGTCCTCAACCCGGTCGCCAAAACCTTCACGCTTATCTCCACGCTG
ATGCTGTCGATGCTCGGGTTCAAGTCCACCGAGACCGGGAGAGTGTCCGA
GGAGGAGCTGCGACTTATCGTAACGGGAGCCAAGATGAGCGGCGGCATCG
AGAGCCAGGAAGGGATGATGATCGAGGGCGTGCTCGACCTACAGGACACT
AAAATCTCGGAGATCATGCGGCCGAGGGTAGAGGTGGTGGCGATCGAGGC
GAACTCGACGATGATGGATCTCTACATGCTCCACCAGGAGACGAAATACA
GCCGAATCCCTGTGTACAGCGGAGAGATCGACCGCATCTCCGGCGTGGTT
CTCATCAAAGAATTGCTCGACTTTGTCCAGGAGCCCGAGAAACTGACGTC
TGTGCTAGTGGCCGACGAGACGGAGAGCACCTACTTCGTGCCGGAGACGA
TGAGCGTTTGGAACGTTCTTGAGGAGGCGAGTCGGATTTGGCGTTTGCAC
ATGGCCATCGTGGTGGACGAGTACGGGGGTACTGCCGGTGTGGTGACGCT
GGAGGACATCCTGGAGGAAGTGGTGGGTGAGATCTACGACGAGAAGGAAG
ATGACGACTTCAGAGAAGAGGAGCACTACATCAACGTCAACGAGGATGGA
ACCTTCACGATTCATGGCATGGCGGACCTCGAGGATGTATGCACTTCGCT
CGCTTTCCAGGAGGTA
back to top