prot_Ecto-sp13_S_contig12404.1995.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12404.1995.1
Unique Nameprot_Ecto-sp13_S_contig12404.1995.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length200
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12404.1995.1 vs. uniprot
Match: D7FYI4_ECTSI (S5 DRBM domain-containing protein n=3 Tax=Eukaryota TaxID=2759 RepID=D7FYI4_ECTSI)

HSP 1 Score: 398 bits (1022), Expect = 6.310e-139
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0 
Query:    1 MAIKEYQIVDFFLGSKLKDEVMKIMPVQKVSAAGQITRFKAFVAVGDESGHVGLGVKCAKEVATAIRGAIIIAKMSVVPVRRGYWGRRNGMPHTVPNKVTGKCGSVRVRLIPAPRGTGLVAAPVPKKLLSMAGVEDCYTSSRGHTRTLGNFVKAVYFALAKTYGYLSPELWKPTVFQSAPYQEHTDFLAKNPAPKAAEF 199
            MAIKEYQIVDFFLGSKLKDEVMKIMPVQKVSAAGQITRFKAFVAVGDESGHVGLGVKCAKEVATAIRGAIIIAKMSVVPVRRGYWGRRNGMPHTVPNKVTGKCGSVRVRLIPAPRGTGLVAAPVPKKLLSMAGVEDCYTSSRGHTRTLGNFVKAVYFALAKTYGYLSPELWKPTVFQSAPYQEHTDFLAKNPAPKAAEF
Sbjct:   83 MAIKEYQIVDFFLGSKLKDEVMKIMPVQKVSAAGQITRFKAFVAVGDESGHVGLGVKCAKEVATAIRGAIIIAKMSVVPVRRGYWGRRNGMPHTVPNKVTGKCGSVRVRLIPAPRGTGLVAAPVPKKLLSMAGVEDCYTSSRGHTRTLGNFVKAVYFALAKTYGYLSPELWKPTVFQSAPYQEHTDFLAKNPAPKAAEF 281
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BLAST of mRNA_Ecto-sp13_S_contig12404.1995.1 vs. uniprot
Match: A0A835Z6C9_9STRA (40S ribosomal protein S2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6C9_9STRA)

HSP 1 Score: 334 bits (856), Expect = 4.500e-114
Identity = 165/191 (86.39%), Postives = 176/191 (92.15%), Query Frame = 0 
Query:    1 MAIKEYQIVDFFLGSKLKDEVMKIMPVQKVSAAGQITRFKAFVAVGDESGHVGLGVKCAKEVATAIRGAIIIAKMSVVPVRRGYWGRRNGMPHTVPNKVTGKCGSVRVRLIPAPRGTGLVAAPVPKKLLSMAGVEDCYTSSRGHTRTLGNFVKAVYFALAKTYGYLSPELWKPTVFQSAPYQEHTDFLAKN 191
            M I+E QIVD FLG KLKDEVMKIMPVQKVSAAGQITRFKAFVAVGD +GHVGLGVKCAKEVATAIRGAI IAKMSVVP+RRGYWGRRNG PHTVP KVTGKCGSVRVRLIPAPRGTGLVA+PV +KLL MAGVEDCYT S GHTRT+GNFVKAV+FAL KTYGYLSPELW PT F+++PYQEHTDFLAK+
Sbjct:   59 MRIQECQIVDKFLGDKLKDEVMKIMPVQKVSAAGQITRFKAFVAVGDSNGHVGLGVKCAKEVATAIRGAITIAKMSVVPIRRGYWGRRNGQPHTVPCKVTGKCGSVRVRLIPAPRGTGLVASPVSRKLLGMAGVEDCYTCSNGHTRTMGNFVKAVFFALGKTYGYLSPELWAPTQFKASPYQEHTDFLAKS 249
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BLAST of mRNA_Ecto-sp13_S_contig12404.1995.1 vs. uniprot
Match: A0A7S4UVA6_9DINO (Hypothetical protein n=2 Tax=Sar TaxID=2698737 RepID=A0A7S4UVA6_9DINO)

HSP 1 Score: 312 bits (799), Expect = 4.820e-105
Identity = 155/190 (81.58%), Postives = 172/190 (90.53%), Query Frame = 0 
Query:    1 MAIKEYQIVDFFLGSKLKDEVMKIMPVQKVSAAGQITRFKAFVAVGDESGHVGLGVKCAKEVATAIRGAIIIAKMSVVPVRRGYWGRRNGMPHTVPNKVTGKCGSVRVRLIPAPRGTGLVAAPVPKKLLSMAGVEDCYTSSRGHTRTLGNFVKAVYFALAKTYGYLSPELWKPTVFQSAPYQEHTDFLAK 190
            + IKEYQIVD+FL + LKDEVMKIMPVQK SAAGQ TRFKAFVAVGD +GHVGLGVKCA EVATAIRGAII+AK+SVVP+RRGYWG++ G+PHTV NKVTGKCGSV VRLIPAPRGTGLVA+PVPKKLL MAGVED Y+ S GHTRT+GNF+KAVY AL+KTYGYLSPELWKPTVF   PYQE+TDFL+K
Sbjct:   72 LPIKEYQIVDYFLPN-LKDEVMKIMPVQKQSAAGQRTRFKAFVAVGDYNGHVGLGVKCASEVATAIRGAIILAKISVVPIRRGYWGKKVGLPHTVANKVTGKCGSVSVRLIPAPRGTGLVASPVPKKLLGMAGVEDVYSQSTGHTRTMGNFIKAVYTALSKTYGYLSPELWKPTVFTPTPYQEYTDFLSK 260
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BLAST of mRNA_Ecto-sp13_S_contig12404.1995.1 vs. uniprot
Match: A0A7S2BZ58_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BZ58_9STRA)

HSP 1 Score: 309 bits (791), Expect = 1.660e-103
Identity = 153/202 (75.74%), Postives = 173/202 (85.64%), Query Frame = 0 
Query:    1 MAIKEYQIVDFFLGSKLKDEVMKIMPVQKVSAAGQITRFKAFVAVGDESGHVGLGVKCAKEVATAIRGAIIIAKMSVVPVRRGYWGRRNGMPHTVPNKVTGKCGSVRVRLIPAPRGTGLVAAPVPKKLLSMAGVEDCYTSSRGHTRTLGNFVKAVYFALAKTYGYLSPELWKPTVFQSAPYQEHTDFL----AKNPAPKAAE 198
            M IKEYQIVD FLG+KLKDEVM IMPVQK + AGQ TRFKAFVAVGD SGHVGLGVKCAKEVATAIRGAII+AKM+++P+RRG+WG++ G PHTV  K+TGKCGSVRVRLIPAPRGTGLVAAP  KK+L+MAG++DCYTSSRGHTRT+GNF+KA +FALAK+YGYLSPELW  T F   P+QEHTDFL     K  APK  E
Sbjct:   94 MPIKEYQIVDLFLGTKLKDEVMGIMPVQKQTTAGQRTRFKAFVAVGDFSGHVGLGVKCAKEVATAIRGAIIMAKMNIIPIRRGFWGKQVGQPHTVSQKLTGKCGSVRVRLIPAPRGTGLVAAPATKKILAMAGLDDCYTSSRGHTRTMGNFIKACFFALAKSYGYLSPELWPETQFLPPPFQEHTDFLKNAGGKEAAPKPFE 295
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BLAST of mRNA_Ecto-sp13_S_contig12404.1995.1 vs. uniprot
Match: A0A3M6TJ54_POCDA (40S ribosomal protein S2 n=3 Tax=Astrocoeniina TaxID=123757 RepID=A0A3M6TJ54_POCDA)

HSP 1 Score: 307 bits (787), Expect = 3.110e-103
Identity = 147/191 (76.96%), Postives = 170/191 (89.01%), Query Frame = 0 
Query:    1 MAIKEYQIVDFFLGSKLKDEVMKIMPVQKVSAAGQITRFKAFVAVGDESGHVGLGVKCAKEVATAIRGAIIIAKMSVVPVRRGYWGRRNGMPHTVPNKVTGKCGSVRVRLIPAPRGTGLVAAPVPKKLLSMAGVEDCYTSSRGHTRTLGNFVKAVYFALAKTYGYLSPELWKPTVFQSAPYQEHTDFLAKN 191
            + IKE++I+DFFLGS LKDEV+KIMPVQK + AGQ TRFKAFVA+GD SGHVGLGVKC+KEVATAIRGAII+AK+SV+PVRRGYWG + G PHTVP KVTGKCGSVRVRLIPAPRGTG+V+APVPKKLL MAG+EDCYTS+RG T TLGNF KA + A++KT+ YL+P++WK TVF  APYQE TDFLAKN
Sbjct:   71 LPIKEHEIIDFFLGSHLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDSSGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGQPHTVPCKVTGKCGSVRVRLIPAPRGTGIVSAPVPKKLLQMAGIEDCYTSARGQTATLGNFAKATFAAISKTFCYLTPDMWKDTVFTKAPYQEFTDFLAKN 261
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BLAST of mRNA_Ecto-sp13_S_contig12404.1995.1 vs. uniprot
Match: A0A484DZT2_BRELC (S5 DRBM domain-containing protein n=7 Tax=Peronosporaceae TaxID=4777 RepID=A0A484DZT2_BRELC)

HSP 1 Score: 305 bits (782), Expect = 1.080e-102
Identity = 149/195 (76.41%), Postives = 169/195 (86.67%), Query Frame = 0 
Query:    1 MAIKEYQIVDFFLGSKLKDEVMKIMPVQKVSAAGQITRFKAFVAVGDESGHVGLGVKCAKEVATAIRGAIIIAKMSVVPVRRGYWGRRNGMPHTVPNKVTGKCGSVRVRLIPAPRGTGLVAAPVPKKLLSMAGVEDCYTSSRGHTRTLGNFVKAVYFALAKTYGYLSPELWKPTVFQSAPYQEHTDFLAKNPAPK 195
            + IKE +IV++FL + LKDEVMKIMPVQK + AGQ TRFKAFVAVGD +GH+GLGVKCAKEVATAIRGAII+AK+S+VPVRRGYWGR  G PHTVPNKVTGKCGSVRVRLIPAPRGTGL AAPVPKKLL MAG+EDCYTS+RGHTRTLGNFVKA ++AL  TY YL+P+LW+   F  +PYQE+TDFLAK    K
Sbjct:   67 LPIKECEIVNYFLEASLKDEVMKIMPVQKQTTAGQRTRFKAFVAVGDSNGHIGLGVKCAKEVATAIRGAIILAKISLVPVRRGYWGRMVGAPHTVPNKVTGKCGSVRVRLIPAPRGTGLCAAPVPKKLLGMAGIEDCYTSARGHTRTLGNFVKATFYALRATYAYLTPDLWEQHTFGQSPYQEYTDFLAKTAIKK 261
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BLAST of mRNA_Ecto-sp13_S_contig12404.1995.1 vs. uniprot
Match: A0A7R9UB19_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UB19_9STRA)

HSP 1 Score: 305 bits (782), Expect = 1.320e-102
Identity = 149/190 (78.42%), Postives = 167/190 (87.89%), Query Frame = 0 
Query:    1 MAIKEYQIVDFFLGSKLKDEVMKIMPVQKVSAAGQITRFKAFVAVGDESGHVGLGVKCAKEVATAIRGAIIIAKMSVVPVRRGYWGRRNGMPHTVPNKVTGKCGSVRVRLIPAPRGTGLVAAPVPKKLLSMAGVEDCYTSSRGHTRTLGNFVKAVYFALAKTYGYLSPELWKPTVFQSAPYQEHTDFLAK 190
            M IKE  IVD FLG KLKDEVMKIMPVQK + AGQ TRFKAFVAVGDE GHVGLGVKCAKEVATAIRGAI  AK++++PVRRGYWGR+ G PHTVP  VTGKCGSVRVRLIPAPRGTGLVAAP  K++L++AG+EDCYTSSRGHTRT+GNF+KAV+FAL+KTYG+L+P+LW PT F    YQEHTDFLAK
Sbjct:   66 MPIKEAPIVDHFLGPKLKDEVMKIMPVQKQTTAGQRTRFKAFVAVGDEDGHVGLGVKCAKEVATAIRGAISNAKLALIPVRRGYWGRKLGNPHTVPTAVTGKCGSVRVRLIPAPRGTGLVAAPATKRILALAGLEDCYTSSRGHTRTMGNFIKAVFFALSKTYGFLTPDLWTPTTFMPHLYQEHTDFLAK 255
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BLAST of mRNA_Ecto-sp13_S_contig12404.1995.1 vs. uniprot
Match: A0A024U0H5_9STRA (40S ribosomal protein S2 n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024U0H5_9STRA)

HSP 1 Score: 305 bits (780), Expect = 2.250e-102
Identity = 146/190 (76.84%), Postives = 167/190 (87.89%), Query Frame = 0 
Query:    1 MAIKEYQIVDFFLGSKLKDEVMKIMPVQKVSAAGQITRFKAFVAVGDESGHVGLGVKCAKEVATAIRGAIIIAKMSVVPVRRGYWGRRNGMPHTVPNKVTGKCGSVRVRLIPAPRGTGLVAAPVPKKLLSMAGVEDCYTSSRGHTRTLGNFVKAVYFALAKTYGYLSPELWKPTVFQSAPYQEHTDFLAK 190
            + +KE +IVD+FL  +LKDEVMKIMPVQK + AGQ TRFKAFVAVGD +GHVGLGVKCAKEVATAIRGAII AKM++VPVRRGYWG+ +G+PHTV NKVTGKCGSVRVRLIPAPRGTGL AAP PKKLL MAG+EDCYTS+RGHTRTLGNFVKA ++AL  TY YL+P+LW PT F   PYQEH+D+L+K
Sbjct:   68 LTVKESEIVDYFLKDRLKDEVMKIMPVQKQTTAGQRTRFKAFVAVGDHAGHVGLGVKCAKEVATAIRGAIINAKMNLVPVRRGYWGKMSGLPHTVCNKVTGKCGSVRVRLIPAPRGTGLCAAPAPKKLLGMAGIEDCYTSARGHTRTLGNFVKATFYALRATYAYLTPDLWTPTKFTPTPYQEHSDYLSK 257
[Close]
BLAST of mRNA_Ecto-sp13_S_contig12404.1995.1 vs. uniprot
Match: M4BLS4_HYAAE (S5 DRBM domain-containing protein n=19 Tax=Oomycota TaxID=4762 RepID=M4BLS4_HYAAE)

HSP 1 Score: 305 bits (780), Expect = 1.320e-101
Identity = 149/195 (76.41%), Postives = 168/195 (86.15%), Query Frame = 0 
Query:    1 MAIKEYQIVDFFLGSKLKDEVMKIMPVQKVSAAGQITRFKAFVAVGDESGHVGLGVKCAKEVATAIRGAIIIAKMSVVPVRRGYWGRRNGMPHTVPNKVTGKCGSVRVRLIPAPRGTGLVAAPVPKKLLSMAGVEDCYTSSRGHTRTLGNFVKAVYFALAKTYGYLSPELWKPTVFQSAPYQEHTDFLAKNPAPK 195
            + IKE +IV++FL S LKDEVMKIMPVQK + AGQ TRFKAFVAVGD +GH+GLGVKCAKEVATAIRGAII+AK+S+VPVRRGYWGR  G PHTVPNKVTGKCGSVRVRLIPAPRGTGL AAPVPKKLL MAG+EDCYTS+RGHTRT+GNFVKA ++AL  TY YL+P+LW+   F  +PYQ HTDFLAK    K
Sbjct:  121 LPIKECEIVNYFLESSLKDEVMKIMPVQKQTTAGQRTRFKAFVAVGDSNGHIGLGVKCAKEVATAIRGAIILAKISLVPVRRGYWGRMVGAPHTVPNKVTGKCGSVRVRLIPAPRGTGLCAAPVPKKLLGMAGIEDCYTSARGHTRTMGNFVKATFYALRATYAYLTPDLWEQHSFVPSPYQAHTDFLAKTAIKK 315
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BLAST of mRNA_Ecto-sp13_S_contig12404.1995.1 vs. uniprot
Match: A7L6A1_ARTSF (40S ribosomal protein S2 (Fragment) n=1 Tax=Artemia franciscana TaxID=6661 RepID=A7L6A1_ARTSF)

HSP 1 Score: 301 bits (772), Expect = 1.480e-101
Identity = 143/198 (72.22%), Postives = 170/198 (85.86%), Query Frame = 0 
Query:    1 MAIKEYQIVDFFLGSKLKDEVMKIMPVQKVSAAGQITRFKAFVAVGDESGHVGLGVKCAKEVATAIRGAIIIAKMSVVPVRRGYWGRRNGMPHTVPNKVTGKCGSVRVRLIPAPRGTGLVAAPVPKKLLSMAGVEDCYTSSRGHTRTLGNFVKAVYFALAKTYGYLSPELWKPTVFQSAPYQEHTDFLAKNPAPKAAE 198
            + IKE++I+DFFLG  LKDEV+KIMPVQK + AGQ TRFKAFVA+GD +GH+GLGVKC+KEVATAIRGAII+AK+S+VPVRRGYWG + G PHTVP+KVTGKCGSV VRLIPAPRGTG+V+APVPKKLL MAG+EDCYT++ G T TLGNF KA Y A+ KTY YL+P+LW  TVFQ +PYQE TD+L+KN  P  A+
Sbjct:   31 LPIKEFEIIDFFLGPSLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDHNGHIGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPSKVTGKCGSVLVRLIPAPRGTGIVSAPVPKKLLQMAGIEDCYTTAVGSTGTLGNFAKATYTAIGKTYSYLTPDLWTETVFQKSPYQEFTDYLSKNHKPIGAQ 228
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12404.1995.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYI4_ECTSI6.310e-139100.00S5 DRBM domain-containing protein n=3 Tax=Eukaryot... [more]
A0A835Z6C9_9STRA4.500e-11486.3940S ribosomal protein S2 n=1 Tax=Tribonema minus T... [more]
A0A7S4UVA6_9DINO4.820e-10581.58Hypothetical protein n=2 Tax=Sar TaxID=2698737 Rep... [more]
A0A7S2BZ58_9STRA1.660e-10375.74Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A3M6TJ54_POCDA3.110e-10376.9640S ribosomal protein S2 n=3 Tax=Astrocoeniina Tax... [more]
A0A484DZT2_BRELC1.080e-10276.41S5 DRBM domain-containing protein n=7 Tax=Peronosp... [more]
A0A7R9UB19_9STRA1.320e-10278.42Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A024U0H5_9STRA2.250e-10276.8440S ribosomal protein S2 n=3 Tax=Aphanomyces TaxID... [more]
M4BLS4_HYAAE1.320e-10176.41S5 DRBM domain-containing protein n=19 Tax=Oomycot... [more]
A7L6A1_ARTSF1.480e-10172.2240S ribosomal protein S2 (Fragment) n=1 Tax=Artemi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.160.770coord: 1..79
e-value: 1.2E-35
score: 123.9
NoneNo IPR availablePANTHERPTHR13718:SF9340S RIBOSOMAL PROTEIN S2coord: 2..191
NoneNo IPR availableSUPERFAMILY54768dsRNA-binding domain-likecoord: 11..82
IPR014721Ribosomal protein S5 domain 2-type fold, subgroupGENE3D3.30.230.10coord: 80..172
e-value: 2.9E-47
score: 160.9
IPR013810Ribosomal protein S5, N-terminalPFAMPF00333Ribosomal_S5coord: 17..81
e-value: 6.6E-26
score: 90.1
IPR013810Ribosomal protein S5, N-terminalPROSITEPS50881S5_DSRBDcoord: 17..80
score: 21.747
IPR005324Ribosomal protein S5, C-terminalPFAMPF03719Ribosomal_S5_Ccoord: 100..166
e-value: 2.3E-25
score: 87.8
IPR005711Ribosomal protein S5, eukaryotic/archaealTIGRFAMTIGR01020TIGR01020coord: 2..176
e-value: 3.9E-74
score: 246.6
IPR000851Ribosomal protein S5PANTHERPTHR13718RIBOSOMAL S SUBUNITcoord: 2..191
IPR018192Ribosomal protein S5, N-terminal, conserved sitePROSITEPS00585RIBOSOMAL_S5coord: 34..66
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 93..172

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12404contigEcto-sp13_S_contig12404:1354..2905 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12404.1995.1mRNA_Ecto-sp13_S_contig12404.1995.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12404 1189..3521 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12404.1995.1 ID=prot_Ecto-sp13_S_contig12404.1995.1|Name=mRNA_Ecto-sp13_S_contig12404.1995.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=200bp
MAIKEYQIVDFFLGSKLKDEVMKIMPVQKVSAAGQITRFKAFVAVGDESG
HVGLGVKCAKEVATAIRGAIIIAKMSVVPVRRGYWGRRNGMPHTVPNKVT
GKCGSVRVRLIPAPRGTGLVAAPVPKKLLSMAGVEDCYTSSRGHTRTLGN
FVKAVYFALAKTYGYLSPELWKPTVFQSAPYQEHTDFLAKNPAPKAAEF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014721Ribosomal_S5_D2-typ_fold_subgr
IPR013810Ribosomal_S5_N
IPR005324Ribosomal_S5_C
IPR005711Ribosomal_S5_euk/arc
IPR000851Ribosomal_S5
IPR018192Ribosomal_S5_N_CS
IPR020568Ribosomal_S5_D2-typ_fold