mRNA_Ecto-sp13_S_contig8540.19944.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8540.19944.1 vs. uniprot
Match: D7G873_ECTSI (Chromodomain-helicase-DNA-binding protein 8 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G873_ECTSI) HSP 1 Score: 1175 bits (3040), Expect = 0.000e+0 Identity = 595/631 (94.29%), Postives = 604/631 (95.72%), Query Frame = 1
Query: 1 QAPRGDQHRVKWRSFGPSGEKTGPSLEDPDFWRKVMPDVMTPDSMVTKLDTFEGMAEDAVTQEDKDAFMKDLGVMVMGLRKSNDDEGEREKGVQLLVRVTCKREWFSEEQCSKAKKWELELQGTRLRQAARQDTKEVEKARAKGRRGGRGARDDVFDAKPKISATPGGSGXXXXXXXXXXXSGGRDHNMDVCARCEDGGVTMMCDGPCQRSFHPACLGMDDNPEEDPWMCNRCLNKVQKCLECGKKGSEMDSHNRAVKIPGGVSRCQLSSCGRYYHKECLDKITPNRTSYSKEGNFKCPQHFCIDCGKTSTNLGPRTLAKCLRCAKARCPDCLKTARYVKKGKWMVCSDHEWTPQDLAMFEEQQRIKKSGADKGKRKPKSPPQPAIQFTPEQEEAQLDVRAPVCYFCKRDRDDPNSVEGAFIRPPFVQRTVKHGDFPIWLHKNCMLYTPECSVEYPGEGGKGSSEGGKKSAPAKDELPSTXXXXXXXXXXDATSSGKIKGETSSGKGAXXXXXXXXGDAGAKAKKKPPSSKPVYYGVDEARKRVGLKCTSCGKQGALIPCHVQSCSVTTHYGCARREGWKFGGLDSDGKIFLCVMHRNEGQVRFERKAPAKRGPRKSVSKAPSKGKSGTPL 1893
QAPRGDQHRVKWRSFGPSGEKTGPSLEDPDFWRKVMPDVMTPDSMVTKLDTFEGMAEDAVTQEDKDAFMKDLGVMVMGLRKSNDDEGEREKGVQLLVRVTCKREWFSEEQCSKAKKWELELQGTRLRQA RQDTK+ +KARAKGRRGGRGARDDVFDAKPKISATPGGSGXXXXXXXXXXXSGGRDHNMDVCARCEDGGVT+MCDGPCQRSFHPACLGMDDNPEEDPWMCNRC+NKVQKCLECGKKGSEMDSHNRAVKIPGGVSRCQLSSCGRYYHKECLDKITPNRTSYSKEGNFKCPQHFCIDCGKTSTNLGPRTL KCLRCAKARCPDCLKTARYVKKGKWMVCSDHEWTPQDLAMFEEQQRIKKSGADKGKRKPK+PPQP IQFTPE+EEAQLDVRAPVCYFCKRDRDDPNS+EGAFIRPPFVQRT+KHGDFPIWLHKNCMLYTPECSVEYPG GGKGSSEGGKKSAPAKDELPST XXXXXXXXXDATSS KIK ET XXXXXXXX KKPPS KPVYYGVDEARKR+GLKCTSCGKQGALIPCHVQSCSVTTHYGCARREGWKFGG DSDGKIFLCVMHRNEGQVRFERKAPAKRGPRKSVSK PSKGK GTP
Sbjct: 2549 QAPRGDQHRVKWRSFGPSGEKTGPSLEDPDFWRKVMPDVMTPDSMVTKLDTFEGMAEDAVTQEDKDAFMKDLGVMVMGLRKSNDDEGEREKGVQLLVRVTCKREWFSEEQCSKAKKWELELQGTRLRQATRQDTKDGDKARAKGRRGGRGARDDVFDAKPKISATPGGSGXXXXXXXXXXXSGGRDHNMDVCARCEDGGVTIMCDGPCQRSFHPACLGMDDNPEEDPWMCNRCMNKVQKCLECGKKGSEMDSHNRAVKIPGGVSRCQLSSCGRYYHKECLDKITPNRTSYSKEGNFKCPQHFCIDCGKTSTNLGPRTLVKCLRCAKARCPDCLKTARYVKKGKWMVCSDHEWTPQDLAMFEEQQRIKKSGADKGKRKPKAPPQPTIQFTPEEEEAQLDVRAPVCYFCKRDRDDPNSIEGAFIRPPFVQRTIKHGDFPIWLHKNCMLYTPECSVEYPGGGGKGSSEGGKKSAPAKDELPSTTXXXXXXXXXDATSSAKIKAETXXXXXXXXXXXXXXXXXXXXXXKKPPSGKPVYYGVDEARKRIGLKCTSCGKQGALIPCHVQSCSVTTHYGCARREGWKFGGHDSDGKIFLCVMHRNEGQVRFERKAPAKRGPRKSVSKTPSKGKGGTPX 3179
BLAST of mRNA_Ecto-sp13_S_contig8540.19944.1 vs. uniprot
Match: D0N059_PHYIT (Chromodomain-helicase-DNA-binding protein, putative n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N059_PHYIT) HSP 1 Score: 155 bits (393), Expect = 1.000e-35 Identity = 140/548 (25.55%), Postives = 235/548 (42.88%), Query Frame = 1
Query: 40 SFGPSGEKTGPSLEDPDFWRKVMPDVMTPDSMVTKLDTFEGMAEDAVTQEDKDAFMKDLGVMVMGL--------------RKSNDDEGEREKGVQLLVRVTCK-REWFSEEQCSKAKKWELELQGTRLRQA----ARQ--------DTKEVEKARAKGRRGGR-GARDDVF--------------------DAKPKISATPGGSGXXXXXXXXXXXSGGRDHNMDVCARCEDGGVTMMCDGPCQRSFHPACLGMDDNPEEDPWMCNRCLNKVQKCLECGKKGSEMDSHNRAVKIPGGVSRCQLSSCGRYYHKECLDKITPNRTSYSKEGNFKCPQHFCIDCGKTSTNLGPRT------LAKCLRCAKARCPDCLKTA-RYVKKGK-WMVCSDHE----------------------------------WTPQDLAMFEEQQRIKKSGADKGKRKPKSPPQPAIQFTPEQEEAQLD---VRAPVCYFCKR-----------DRDDPNSVEGAFIRPPFVQRTVKHGDFPIWLHKNCMLYTPECSVEYPG 1371
SF G S++DP+FW KV+P ++ + + KL+ +G A ++ ++ K F+ +L + + L S D + E + +Q+L V+ K R+ FS +Q K + +L+ +R+R AR DT + ++ R G R G+ D+ + DA P I+ GG + D+C C DGG+ ++CDGPC RSFH C+GM D P ++ W+C C CL C + G + + GV++C ++ CGR+YHK CL + + R + + F+CP HFC C K +T + L C+ C++A PDC+ +A ++++ K M+C++H PQ + + E++ + + K KR+P SP +P+ + + + AQ R VC C R D D ++EG FI P + + + +H NC +++PE V+ G
Sbjct: 1455 SFVAEGSTGELSVDDPNFWEKVLPGAVSVEMLSLKLE--DGSAVNS--RQSKIKFISNLDIALTSLVAEMSSGNSSDDGRHGSRDIQHEYDIAIQVLNTVSSKYRDEFSNDQIDLVKGYLTKLEKSRVRSCRLAPARTNLFQDEDFDTPKKKRRRRSTPAGSRAGSEDEAYGNTPVKKRGRGRPPKHPRTEDANPPIALFQGGI---------------INETDDLCTLCGDGGLILLCDGPCHRSFHLDCVGMKDEPNDEQWLCPDCAEGRHMCLICKQVGE--------MGVEFGVTQCSVAKCGRFYHKGCLAENS--RVEWVGKKRFRCPSHFCHACSKQATTNSNKKGEDNTGLVSCIHCSQAFHPDCIPSADKFIRLSKNLMICANHVDGKKAPGKISARASGSAPAAQRAGAVLAAASTQLEIPQHIPLEEDEAEQPEKSSGKRKREP-SPKRPSSSGSKKSKPAQPTNRIARQKVCALCHRGDVMGGDSTGTDTADM-ALEGPFIEAPVRLKYTDRPNESVHVHLNCAVHSPEVYVKADG 1971
BLAST of mRNA_Ecto-sp13_S_contig8540.19944.1 vs. uniprot
Match: A0A8K1CDK1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CDK1_PYTOL) HSP 1 Score: 149 bits (375), Expect = 1.830e-33 Identity = 155/688 (22.53%), Postives = 257/688 (37.35%), Query Frame = 1
Query: 40 SFGPSGEKTGPSLEDPDFWRKVMPDVMTPDSMVTKLDTFEGMAEDAVTQEDKDAFMKDLGV----MVMGLRKSNDDEG--------EREKGVQLLVRVTCK-REWFSEEQCSKAKKWELELQGTRLRQA----ARQDTKEVEKARAKGRRGGR--------------------------------------GARDDVFDAKPKISA---TPGGSGXXXXXXXXXXXSGGRDHNMDVCARCEDGGVTMMCDGPCQRSFHPACLGMDDNPEEDPWMCNRCLNKVQKCLECGKKGSEMDSHNRAVKIPGGVSRCQLSSCGRYYHKECLDKITPNRTSYSKEGNFKCPQHFCIDCGKTSTNLGP---------RTLAKCLRCAKARCPDCLKTA-RYVKKG-KWMVCSDHEWTPQDLAMFEEQQRIKKSGADKGKRKPKSPPQPAIQFTPEQEEAQLDVRAP------------VCYFCKR-DRDDPN-------------------SVEGAFIRPPFVQRTVKHGDFPIWLHKNCMLYTPECSVEYPGEGGKGSSEGGKKSAPAKDELPSTXXXXXXXXXXDATSSGKIKGETSSGKGAXXXXXXXXGDAGAKAKKKPPSSKPVYYGVDEARKRVG-LKCTSCGKQGALIPCHVQSCSVTTHYGCARREGWKFGGLDSDGKIFLCVMHRNE 1797
SF G S++DP+FW KV+P M+ + + KL+ +A +++ K FM +L + +V LR N+D+ E + +Q+L ++T K ++ FS +Q K + +L+ +R+R ++++T +V+ + R+D A+ + S TP G SG + + D+C C DGG+ ++CDGPC RSFH C+GM++ P+++ W+C C CL C + G + + GV +C ++ CGR+YHK CL K R + + F+CP HFC C + + + C+ CA++ P C+K++ ++++ M+C++H + + + IK+ A + + +++ PE E DV VC C++ D DP SVEG FI P + ++LH NC L++PE V+ G + + A KR LKCTSC + GA + C V+ C H CA G +F G C H E
Sbjct: 1567 SFVAEGASNDLSVDDPNFWEKVLPGAMSVEMLSVKLEDGSALA----SRQSKIKFMSNLDISLNELVEELRNGNEDDSRSGLNLQHEYDIAIQVLHQITTKHKKDFSNDQLDLVKGYLNKLEKSRVRSCRTAPSKKETSQVDDFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVSTRNDASPARSRPSKKRKTPTG-----FEAPSSMFSGVINDSDDLCTLCGDGGLILLCDGPCHRSFHLECVGMNEEPDDERWLCPDCAAGRHMCLICKQVGE--------MGVEFGVIQCSVAKCGRFYHKGCLAKHP--RVDWVGKKRFRCPSHFCHGCSQEQQLVXXXXXXXXSKREPVVGCIHCAQSFHPGCIKSSEQFIRLSTNLMICANHLRPKKPIKAENGKSSIKQESAQTSRN---GHTKESVEEIPELEPLDEDVSPAELKKIAEVPALKVCGLCRQGDTTDPEAESSSKRGKRSTKADAGVTSVEGPFIEAPVRLQLADKSTQLVYLHMNCALHSPEVYVKPDG---------------------------------------------------------------------------TFCNLQRAIKRGRQLKCTSCKEVGATVGCVVEKCRCNYHLRCAVESGGEFIGSPY---TLYCKSHAEE 2154
BLAST of mRNA_Ecto-sp13_S_contig8540.19944.1 vs. uniprot
Match: H3GJ31_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GJ31_PHYRM) HSP 1 Score: 148 bits (374), Expect = 2.390e-33 Identity = 170/669 (25.41%), Postives = 272/669 (40.66%), Query Frame = 1
Query: 40 SFGPSGEKTGPSLEDPDFWRKVMPDVMTPDSMVTKLDTFEGMAEDAVTQEDKDAFMKDLGVMVMGL-----RKSNDDEG---------EREKGVQLLVRVTCK-REWFSEEQCSKAKKWELELQGTRLRQAARQ------------DTKEVEKARAKGRRGGRGAR--DDVFDAKP---KISATPG------GSGXXXXXXXXXXXSGGRDHNMDVCARCEDGGVTMMCDGPCQRSFHPACLGMDDNPEEDPWMCNRCLNKVQKCLECGKKGSEMDSHNRAVKIPGGVSRCQLSSCGRYYHKECLDKITPNRTSYSKEGNFKCPQHFCIDCG----------KTSTNLGPRTLAKCLRCAKARCPDCLKTA-RYVKKGK-WMVCSDH---EWTPQDLA-MFEEQQRIKKSGADKGKRKPKSPPQPAIQFTPEQEEAQLDVRAPVCYFCKRDRDDPNSVEGAFIRPPFVQRTVKHGDFPIWLH------KNCMLYTPECSVEYPGE--GGKGSSEGGKKSAPAKDELPSTXXXXXXXXXXDATSSGKIKGETSSGKGAXXXXXXXXG---DAGAKAK--KKPPSS-----------KPVYYGVD-------EARKRVG-LKCTSCGKQGALIPCHVQSCSVTTHYGCARREGWKFGGLDSDGKIFLCVMH 1788
SF G S++DP+FW KV+P ++ + + KL+ +G A ++ ++ K F+ +L + + L +N D+G E + +Q+L V+ K R+ FS EQ K + +L+ +R+R Q DT + ++ R G R A D+ + P K S G G+ +G + + D+C C DGG+ ++CDGPC RSFH C+GM D P ++ W+C C CL C + G + + GV++C ++ CGR+YHK CL K + R + + F+CP HFC C K+ N+ + C+ C++A PDC+ ++ ++++ K M+C+ H PQ A E + ++GA A+ Q+ ++ P+ D++D S G R P ++R G + K+ C++ + G GG +G + AP+ G G ++ GA G +A + K +KP S VY D +A KR LKCTSC K GA + C V C H CA G G +D C H
Sbjct: 1376 SFVAEGSTGELSVDDPNFWEKVLPGAVSVEMLSLKLE--DGSALNS--RQSKIKFISNLDIALTSLVAEMSSSNNSDDGRVGGRDIQHEYDIAIQVLSTVSSKCRDEFSNEQIDLVKGYLSKLEKSRVRSCRLQPSRTNMYQYEDFDTPKKKRKRRSTPSGSRAASTDDEAYGDTPVKKKGSRQRGRPPKHPGTDGNAKPPTALFQAGAINDSDDLCTLCGDGGLILLCDGPCHRSFHLECVGMKDEPNDEQWLCPDCAEGRHMCLICKQVGE--------MGVEFGVTQCSVAKCGRFYHKGCLAKNS--RVEWVGKKRFRCPSHFCHACSQKESAAKSEKKSDANMA---VVSCIHCSQAFHPDCIPSSDKFIRLSKNLMICASHLVGMKPPQAAAGNMTEPRSTHRAGA-------------ALAAAAAQQRLEVPEEIPL------DKEDEKS-NGKRKRAPSLKRASTSGSKKSKSYSSDAPGKSKSTQPKVCALCHRGNVMGGGTDGQGSLQLAPS-------------------AKKGATTGASADSTGAATADMALEGPFIEAPVRLKYAEKPNESVHVHLNCAVHSPEVYVKADGLIMNLPKAIKRGRQLKCTSCHKFGATVGCVVAKCRRNYHLRCAVESG---GEIDGTTYALYCKPH 1985
BLAST of mRNA_Ecto-sp13_S_contig8540.19944.1 vs. uniprot
Match: A0A024GDR7_9STRA (Uncharacterized protein n=7 Tax=Albugo candida TaxID=65357 RepID=A0A024GDR7_9STRA) HSP 1 Score: 147 bits (372), Expect = 4.060e-33 Identity = 107/347 (30.84%), Postives = 163/347 (46.97%), Query Frame = 1
Query: 40 SFGPSGEKTGPSLEDPDFWRKVMPDVMTPDSMVTKLDTFEGMAEDAVTQEDKDAFMKDLGVMVMGL--RKSNDD----EGEREKGVQLLVRVTCK-REWFSEEQCSKAKKWELELQGTRLRQAARQDTKEVEKARAKGRRGGRGARDDVFDAKPKISATPGGSGXXXXXXXXXXXSGGRDHNMDVCARCEDGGVTMMCDGPCQRSFHPACLGMDDNPEEDPWMCNRCLNKVQKCLECGKKGSEMDSHNRAVKIPGGVSRCQLSSCGRYYHKECLDKITPNRTSYSKEGNFKCPQHFCIDCGKTSTNLGPR--TLAKCLRCAKARCPDCLKTARYVKKGKW-MVCSDH 1050
SF G S++DP+FW KV+P M+ + + +L+ EG A T E K F+ LGV + L KS+D E E + +Q+L R++ K + FS +Q + + L+ +R+R T E RR GA +++ K I A+ D+C C DGG+ + CDGPC RSFH C+GM P+++ W+C C CL C + G + + GV +C ++ CGR+YH+ CL+ T + + F+CP HFC C + PR T+ CL CA+A DC+ + V+ + M+CS H
Sbjct: 1464 SFVADGSTGELSVDDPNFWEKVLPGAMSVEMLSIQLE--EGSAY--ATNESKTKFIGKLGVALDALVIDKSSDSRIGVEREYDLAIQVLHRISTKLSKHFSRQQLTIVGTYLSRLEKSRVRSCRTLGTPE-------SRRREDGAVEEIKKRKRTIKASRAKPVQMIP------------ETDDLCTLCGDGGLILFCDGPCHRSFHLECIGMTQEPQDEQWLCPDCKAGKHVCLLCKQVGE--------MGVEFGVLQCSMARCGRFYHRGCLE--TDRHVEWVGKKRFRCPSHFCHQCKERKR---PRHSTIVSCLHCARAFHADCIPSNDNVRLSRGLMICSKH 1774
BLAST of mRNA_Ecto-sp13_S_contig8540.19944.1 vs. uniprot
Match: A0A0W8CJ28_PHYNI (Chromodomain-helicase-DNA-binding protein 9 n=26 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CJ28_PHYNI) HSP 1 Score: 146 bits (369), Expect = 1.030e-32 Identity = 140/566 (24.73%), Postives = 239/566 (42.23%), Query Frame = 1
Query: 40 SFGPSGEKTGPSLEDPDFWRKVMPDVMTPDSMVTKLDTFEGMAEDAVTQEDKDAFMKDLGVMVMGL------RKSNDD--------EGEREKGVQLLVRVTCK-REWFSEEQCSKAKKWELELQGTRLRQA----ARQ--------DTKEVEKARAKGRRGGRG--ARDDVF--------------------DAKPKISATPGGSGXXXXXXXXXXXSGGRDHNMDVCARCEDGGVTMMCDGPCQRSFHPACLGMDDNPEEDPWMCNRCLNKVQKCLECGKKGSEMDSHNRAVKIPGGVSRCQLSSCGRYYHKECLDKITPNRTSYSKEGNFKCPQHFCIDCGKTSTNLGPRTLAK---------CLRCAKARCPDCLKTA-RYVKKGK-WMVCSDH-----------------------EWT----------PQDLAMFEEQQRIKKSGADKGKRKPKSPPQPAIQFTPEQEEAQLDVRAP---VCYFCKRDR-----------DDPNSVEGA----------FIRPPFVQRTV--KHGDFP---IWLHKNCMLYTPECSVEYPG 1371
SF G S++DP+FW KV+P ++ + + KL+ + +++ K F+ +L + + L S+DD + E + +Q+L V+ K R+ FS +Q K + +L+ +R+R AR DT + ++ R G R + D+ + DA P I+ GG + D+C C DGG+ ++CDGPC RSFH C+GM D P ++ W+C C CL C + G + + GV++C ++ CGR+YHK CL + + R + + F+CP HFC C KTS N + K C+ C++A P+C+ +A ++++ K M+C++H +T PQ + + E++ + K KR+P SP +P+ + + + AQ R +C C R P + +G + PF++ V K+ D P +++H NC +++PE V+ G
Sbjct: 1661 SFVAEGATGELSVDDPNFWEKVLPGAVSVEMLSLKLEDSSAVN----SRQSKIKFISNLDIALTSLVAEMSSGNSSDDGRVGSRDIQHEYDIAIQVLNTVSSKYRDEFSNDQIDLVKGYLSKLEKSRVRSCRLAPARTNMFQDEDFDTPKKKRRRRSTPSGSRAGSSEDEAYGNTPVKKRGRGRPPKHPRTEDANPPITLFQGGI---------------INETDDLCTLCGDGGLILLCDGPCHRSFHLECVGMKDEPNDEQWLCPDCAEGRHMCLICKQVGE--------MGVEFGVTQCSVAKCGRFYHKGCLAENS--RVEWVGKKRFRCPSHFCHACSKTSNNQAANSNKKSDDKTGVVSCIHCSQAFHPECIPSADKFIRLSKNLMICANHIDGKKAPVSAGKTKASRSAHAGAVFTQAAAQQRLEIPQHIPLDEDEAEPPEKSNGKRKREP-SPKRPSSSGSKKSKSAQSANRIAKPKICALCHRGNVMGGSDSQELPPPPTTKQGVDSTGTDTADIALEGPFIEAPVRLKYADKPNESVYVHLNCAVHSPEVYVKADG 2196
BLAST of mRNA_Ecto-sp13_S_contig8540.19944.1 vs. uniprot
Match: A0A662XHZ1_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XHZ1_9STRA) HSP 1 Score: 144 bits (362), Expect = 7.670e-32 Identity = 113/394 (28.68%), Postives = 182/394 (46.19%), Query Frame = 1
Query: 40 SFGPSGEKTGPSLEDPDFWRKVMPDVMTPDSMVTKLDTFEGMAEDAVTQEDKDAFMKDLGVMV------MGLRKSNDD--------EGEREKGVQLLVRVTCK-REWFSEEQCSKAKKWELELQGTRLRQA----ARQDTKEVE---KARAKGRR------GGRGA--RDDVFDAKPK----------------ISATPGGSGXXXXXXXXXXXSGGRDHNMDVCARCEDGGVTMMCDGPCQRSFHPACLGMDDNPEEDPWMCNRCLNKVQKCLECGKKGSEMDSHNRAVKIPGGVSRCQLSSCGRYYHKECLDKITPNRTSYSKEGNFKCPQHFCIDCGKTS---------TNLGPRTLAKCLRCAKARCPDCL-KTARYVKKGK-WMVCSDH 1050
SF G +++DP+FW KV+P ++ + + KL+ ++ +++ K F+ +L + + MG S DD + E + +Q+L V+ K R FS EQ K + +L+ +R+R R + E+E + + K RR G RGA DD + PK ++A GG G + + D+C C DGG+ ++CDGPC RSFH C+GM+ P ++ W+C C CL C K G EM + GV++C ++ CGR+YHK C+ K R + + F+CP HFC C S T P + C+ C++A P C+ T ++++ K M+C++H
Sbjct: 1590 SFVAEGSTGELAVDDPNFWEKVLPGAVSVEMLSLKLEDGSAVS----SRQSKIKFISNLDIALTGLVAEMGAGNSLDDGRVGGRNVQHEYDIAIQVLSTVSSKYRSEFSNEQIDLVKGYLAKLEKSRVRSCRLVPGRTNLFELEDFDEPKRKRRRKSNSVAGSRGASSEDDAYGETPKKKGLKKRGRPPKHPAHVAAPQGGE-----PSAVLFRGGVINDSDDLCTLCGDGGLILLCDGPCHRSFHLECIGMEAEPNDEEWLCPDCAAGRHMCLICKKVG-EMGAEF-------GVTQCSMAKCGRFYHKGCIAKHP--RVEWVGKKRFRCPSHFCHSCSLASQQRVAAPDKTAAEPTVVVSCIHCSQAFHPLCIPSTGKFMRLSKNLMICANH 1964
BLAST of mRNA_Ecto-sp13_S_contig8540.19944.1 vs. uniprot
Match: A0A2D4BZA4_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BZA4_PYTIN) HSP 1 Score: 142 bits (359), Expect = 1.790e-31 Identity = 137/547 (25.05%), Postives = 225/547 (41.13%), Query Frame = 1
Query: 40 SFGPSGEKTGPSLEDPDFWRKVMPDVMTPDSMVTKLDTFEGMAEDAVTQEDKDAFMKDL----GVMVMGLRKSNDDEG------EREKGVQLLVRVTCK-REWFSEEQCSKAKKWELELQGTRLRQ-------AARQDTKEVEKARAKG--------------------------RRGGRGARDDVFDAKP-------KISATPGGSGXXXXXXXXXXXSGGRDHNMDVCARCEDGGVTMMCDGPCQRSFHPACLGMDDNPEEDPWMCNRCLNKVQKCLECGKKGSEMDSHNRAVKIPGGVSRCQLSSCGRYYHKECLDKITPNRTSYSKEGNFKCPQHFCIDCGK------TSTNLGPRTLAK-----CLRCAKARCPDCLKTA-RYVKKG-KWMVCSDH-------------------EWTPQDLA--MFEEQQRIKKSGADKGKRKPKSPPQPAIQFTPEQEEAQLDVRAP-VCYFCKRDRDDPNSVEGAF------------IRPPFVQRTVK-----HGDFPIWLHKNCMLYTPECSVEYPG 1371
SF G S++DP+FW KV+P M+ + + KL+ +A +++ K F+ +L G +V LR + E + +Q+L +T K ++ FS +Q K + +L+ +R+R ++ +DT K R KG R G+ + D+ P K A PG + D+C C DGG+ ++CDGPC RSFH C+GMD PE++ W+C C CL C + G + + GV +C ++ CGR+YHK CL K + R + + F+CP HFC C + S + +T K C+ CA++ P C+K + ++++ M+C+ H P D A + E Q + K + K K S I+ PE ++ ++ P +C C+R + S E I P + +V+ +++H NC L++PE V+ G
Sbjct: 1540 SFVAEGASHDISVDDPNFWEKVLPGAMSVEMLSVKLEDGSALA----SRQSKIKFISNLDIALGELVDELRSGEESRSGLNVQHEYDVAIQVLHAITTKHKKDFSNDQLDLVKGYLNKLEKSRVRSCRVVRDSSSVEDTPSKSKRRLKGDDXXXXXXXXXXXXXXALVHKTKKARRSKGKASAPTSADSSPVKSRSSHKRKAPPGFESAPNLFAGAVVND-----SDDLCTLCGDGGLILLCDGPCHRSFHLDCIGMDSEPEDEHWLCPDCAAGRHMCLICKQVGE--------MGVEFGVIQCSVAKCGRFYHKGCLSKHS--RVEWVGKKRFRCPSHFCHGCSQEKQLAEASKSSKKKTSKKEPVVSCIHCAQSFHPSCIKVSDQFIRLSTNLMICATHLRPKKPTRDSHSLQVDQSGSGKPSDTANAIVEVQPKSKSDSSSVPKSKKSSHRAETIR-EPETKKPKMFTPVPKICVLCRRGDETTGSSENKSSXXXXXXNPEQPIEGPLLDSSVRLYFSDKTSQTVYIHINCALHSPEVFVKPDG 2066
BLAST of mRNA_Ecto-sp13_S_contig8540.19944.1 vs. uniprot
Match: F0WMW6_9STRA (ChromodomainhelicaseDNAbinding protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WMW6_9STRA) HSP 1 Score: 139 bits (351), Expect = 1.650e-30 Identity = 102/333 (30.63%), Postives = 149/333 (44.74%), Query Frame = 1
Query: 73 SLEDPDFWRKVMPDVMTPDSMVTKLDTFEGMAEDAVTQEDKDAFMKDLGVMV--MGLRKSNDD----EGEREKGVQLLVRVTCKREWFSEEQCSKAKKWELELQGTRLRQAARQDTKEVEKARAKGRRGGRGARDDVFDAKPKISATPGGSGXXXXXXXXXXXSGGRDHNMDVCARCEDGGVTMMCDGPCQRSFHPACLGMDDNPEEDPWMCNRCLNKVQKCLECGKKGSEMDSHNRAVKIPGGVSRCQLSSCGRYYHKECLDKITPNRTSYSKEGNFKCPQHFCIDCGKTSTNLGPRTLAKCLRCAKARCPDCLKTARYVK-KGKWMVCSDH 1050
S++DP+FW KV+P M+ + + +L+ A T E K F+ LG+ + + L K+ D E E + +Q+L R++ K SK LE+ GT L +R + V R R D D K K T S D+C C DGG+ ++CDGPC RSFH C+GM P+++ W+C C CL C K G + + GV +C ++ CGR+YH+ CL+ + + F+CP HFC C K T+ CL CA+A DC+ + V G M+CS H
Sbjct: 1447 SVDDPNFWEKVLPGAMSVEMLSIQLEDGSAYA----TSEAKSKFIGKLGIALDALVLDKTGDHRMGLEREYDLAIQVLHRISTK--------LSKHFTRHLEIVGTYL---SRLEKSRVRTCRTLATPESRRQEDVDVDVK-KRKRTMKSSRPKSTQLIS--------ETHDLCTLCGDGGLILLCDGPCHRSFHLECIGMTHEPQDEHWLCPDCNAGKHMCLLCKKVGE--------MGVEFGVLQCSMARCGRFYHRGCLE--VDRHVEWVGKKRFRCPSHFCHSC-KERKRPRQSTIVSCLHCARAFHADCIPSNDNVLLSGGLMICSKH 1744
BLAST of mRNA_Ecto-sp13_S_contig8540.19944.1 vs. uniprot
Match: A0A397CCV0_9STRA (PHD-type domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397CCV0_9STRA) HSP 1 Score: 135 bits (341), Expect = 7.300e-30 Identity = 97/350 (27.71%), Postives = 156/350 (44.57%), Query Frame = 1
Query: 40 SFGPSGEKTGPSLEDPDFWRKVMPDVMTPDSMVTKLDTFEGMAEDAVTQEDKDAFMKDLGVMVMGLRKSNDDEG-----EREKGVQLLVRVTCKREWFSEEQCSKAKKWELELQGTRLRQA-------ARQDTKEVEKARAKGRRGGRGARDDVFDAKPKISATPGGSGXXXXXXXXXXXSGGRDHNMDVCARCEDGGVTMMCDGPCQRSFHPACLGMDDNPEEDPWMCNRCLNKVQKCLECGKKGSEMDSHNRAVKIPGGVSRCQLSSCGRYYHKECLDKITPNRTSYSKEGNFKCPQHFCIDCGKTSTNLGPRTLAKCLRCAKARCPDCLKTARYVK-KGKWMVCSDH 1050
SF G S+ DP FW KV+ + + + KL+ +A + + LG ++ +R++ ++ E E V +L R+ ++ FS +Q +K+ ++ +R+R + DT + K G R + ++ K SA +GG DVC C +GGV ++CDG C RSFH C+G+ D P + W+C C +CL CGK G +M S GV++C ++ CGR+YH C+ + + K+ F+CP HFC C K + + L C C K CLK R ++ +M+C+DH
Sbjct: 32 SFVAEGSTGDLSVNDPSFWEKVLGHISV-EMLSKKLEDGSALASRQTKAKFMAQLQQALGQLIQDVRENKKEKDAFFQHEYEVAVNMLQRLAAIKDQFSSDQRKVFEKYMDQMAKSRVRSCRVNTAAVSLDDTSSPVRRPMKATDGRRTRWRKMKISRSKASAVE------------FEGAGG-----DVCTLCGEGGVLLLCDGACHRSFHLDCVGLTDEPTDAKWLCPDCSAGKHRCLACGKVG-KMGSEQ-------GVTQCAMAKCGRFYHLSCMHNTSAHVEWVGKK-RFRCPSHFCAVCDKGDS--AKKRLLVCTHCPKGFHVKCLKHQRLLQLSSAYMICADH 352 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8540.19944.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8540.19944.1 >prot_Ecto-sp13_S_contig8540.19944.1 ID=prot_Ecto-sp13_S_contig8540.19944.1|Name=mRNA_Ecto-sp13_S_contig8540.19944.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=652bp QAPRGDQHRVKWRSFGPSGEKTGPSLEDPDFWRKVMPDVMTPDSMVTKLDback to top mRNA from alignment at Ecto-sp13_S_contig8540:334..6811+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8540.19944.1 ID=mRNA_Ecto-sp13_S_contig8540.19944.1|Name=mRNA_Ecto-sp13_S_contig8540.19944.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6478bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8540:334..6811+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8540:334..6811+ >mRNA_Ecto-sp13_S_contig8540.19944.1 ID=mRNA_Ecto-sp13_S_contig8540.19944.1|Name=mRNA_Ecto-sp13_S_contig8540.19944.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1956bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8540:334..6811+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |