mRNA_Ecto-sp13_S_contig8537.19940.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8537.19940.1 vs. uniprot
Match: A0A6H5JI06_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI06_9PHAE) HSP 1 Score: 499 bits (1284), Expect = 1.570e-171 Identity = 254/277 (91.70%), Postives = 258/277 (93.14%), Query Frame = 3
Query: 75 HHAALPCARQGERERDHGRMKSNSSCRSAAFLALLALIRAAAGFTTSLLSSLASSHASVSRTPPQRHSTKTGRRSCSMSEGQLGVGFDFGTSGVRAVVIDVEGEVKFDSSLRWAAPDDPDEWLRAADTLMGDVPLALRKRVSRVCFSGTSASCLLVDVHDPCRVTRGPRMYSYNTLTEPISMEAARRALGALEQVAPDKHTTLSGTSALMKLVCWHLESPIAQEEAFSHQADYVAAHARGARGPGSIVSDWNNALKAGFDVETLRWPGWLLESKLGE 905
H C R GERERDHGRMK+N CRSAAFL L ALI AAAGFTT+LLSS ASSH VSR PQRHSTKTGRRSCSMSEGQLGVGFDFGTSGVRAVVIDVEGEVKFDSSLRWAAPDDPDEWLRAADTLMGDVPLALRKRVSRVCFSGTSASCLLVD+HDPCRVTRGPRMYSYNTLTEPISMEAARRALGALEQ+APDKHTTLSGTSALMKLVCWHLESPIA EEAFSHQADYVAAHARGARGPGSIVSDWNNALKAGFDVETLRWPGWLL SKLGE
Sbjct: 66 HPCRRLCRRSGERERDHGRMKANGGCRSAAFLPLFALICAAAGFTTTLLSSPASSHGCVSRPLPQRHSTKTGRRSCSMSEGQLGVGFDFGTSGVRAVVIDVEGEVKFDSSLRWAAPDDPDEWLRAADTLMGDVPLALRKRVSRVCFSGTSASCLLVDIHDPCRVTRGPRMYSYNTLTEPISMEAARRALGALEQIAPDKHTTLSGTSALMKLVCWHLESPIAPEEAFSHQADYVAAHARGARGPGSIVSDWNNALKAGFDVETLRWPGWLLGSKLGE 342
BLAST of mRNA_Ecto-sp13_S_contig8537.19940.1 vs. uniprot
Match: D7FVM2_ECTSI (Carbohydrate kinase, FGGY n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVM2_ECTSI) HSP 1 Score: 401 bits (1031), Expect = 8.710e-136 Identity = 197/200 (98.50%), Postives = 199/200 (99.50%), Query Frame = 3
Query: 306 MSEGQLGVGFDFGTSGVRAVVIDVEGEVKFDSSLRWAAPDDPDEWLRAADTLMGDVPLALRKRVSRVCFSGTSASCLLVDVHDPCRVTRGPRMYSYNTLTEPISMEAARRALGALEQVAPDKHTTLSGTSALMKLVCWHLESPIAQEEAFSHQADYVAAHARGARGPGSIVSDWNNALKAGFDVETLRWPGWLLESKLGE 905
MSEGQLGVGFDFGTSGVRAVVIDVEGEVKFDSSLRWAAPDDPDEWLRAADTLMGDVPLALRKRVSRVCFSGTSASCLLVDVHDPCRVTRGPRMYSYNTLTEPISMEAARRALGALEQ+APDKHTTLSGTSALMKLVCWHLESPIA EEAFSHQADYVAAHARGARGPGSIVSDWNNALKAGFDV+TLRWPGWLLESKLGE
Sbjct: 1 MSEGQLGVGFDFGTSGVRAVVIDVEGEVKFDSSLRWAAPDDPDEWLRAADTLMGDVPLALRKRVSRVCFSGTSASCLLVDVHDPCRVTRGPRMYSYNTLTEPISMEAARRALGALEQIAPDKHTTLSGTSALMKLVCWHLESPIAPEEAFSHQADYVAAHARGARGPGSIVSDWNNALKAGFDVDTLRWPGWLLESKLGE 200
BLAST of mRNA_Ecto-sp13_S_contig8537.19940.1 vs. uniprot
Match: A0A836CG13_9STRA (Carbohydrate kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG13_9STRA) HSP 1 Score: 215 bits (547), Expect = 3.800e-63 Identity = 117/198 (59.09%), Postives = 139/198 (70.20%), Query Frame = 3
Query: 306 MSEG-QLGVGFDFGTSGVRAVVIDVEGE-VKFDSSLRWAAP---DDPDEWLRAADTLMGDVPLALRKRVSRVCFSGTSASCLLVDVHDPCRVTRGPRMYSYNTLTEPISMEAARRALGALEQVAPDKHTTLSGTSALMKLVCWHLESPIAQEEAFSHQADYVAAHARGARGPGSIVSDWNNALKAGFDVETLRWPGWL 884
MS G QL +GFD+GTSG RAVVID + V+ + ++W A D P WL AA L+ DVP A + R++R+C SGTSASCLLV+ DP VTRGP MY+YNTL E S AA ALE+VAP HTTLSGTSALMKL+ WH E+P+ EA +HQADYV+A+ RG G IV+DWNNALK GFDVE LRWP WL
Sbjct: 1 MSSGPQLSIGFDYGTSGARAVVIDSATKTVQHVADVKWTAEEGYDSPQAWLSAAAALLDDVPAAAKARMARICVSGTSASCLLVERSDPLAVTRGPAMYNYNTLRE--SPAAAXXXXXALERVAPPLHTTLSGTSALMKLLTWHAEAPLGAHEALAHQADYVSAYMRGGAGA-EIVTDWNNALKTGFDVEQLRWPDWL 195
BLAST of mRNA_Ecto-sp13_S_contig8537.19940.1 vs. uniprot
Match: W7TDC3_9STRA (Carbohydrate fggy n=4 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TDC3_9STRA) HSP 1 Score: 149 bits (377), Expect = 6.410e-38 Identity = 90/213 (42.25%), Postives = 126/213 (59.15%), Query Frame = 3
Query: 309 SEGQLGVGFDFGTSGVRAVVIDVEGEVK--FDSSLRWA---APDDPDEWLRAADTLMGDVPLALRKRVSRVCFSGTSASCLLVDVHDPCRVTRGPRMYSYNTLTEPISMEAARRALGALEQVAPDKHTTLSGTSALMKLVCWHLESPIAQEEAFSHQADYVAA-------HARGARGPGSIVSDWNNALKAGFDVETLRWPGW---LLESKLG 902
S+ + G GFDFGTSGVR VV++ +S RW D +EW A L+ D+P A+R R++RV SGTSASC++V+ + +TR PR+Y+++ L E E R+A + AP KH TLSGTS+LMK+V WHLE ++E HQAD+++A A+ + VSDWNN LK G+D+ L +PGW LL+ +LG
Sbjct: 34 SKPRCGAGFDFGTSGVRLVVLEASETPTCVHQASFRWPHSQTVQDAEEWRLAMFRLLDDIPPAIRSRMARVAISGTSASCVVVNKANGA-ITRNPRLYNWDALRE--IPETGRKAQCLIADYAPAKHVTLSGTSSLMKVVSWHLEEAFHRDEVMLHQADFLSACLIHDTSTAKREQSCFPRVSDWNNMLKLGYDMSALAYPGWFSPLLDDRLG 243
BLAST of mRNA_Ecto-sp13_S_contig8537.19940.1 vs. uniprot
Match: A0A4D9CXF7_9STRA (RING-type domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CXF7_9STRA) HSP 1 Score: 151 bits (381), Expect = 2.450e-37 Identity = 93/213 (43.66%), Postives = 127/213 (59.62%), Query Frame = 3
Query: 309 SEGQLGVGFDFGTSGVRAVVIDVEGEVK--FDSSLRWA---APDDPDEWLRAADTLMGDVPLALRKRVSRVCFSGTSASCLLVDVHDPCRVTRGPRMYSYNTLTEPISMEAARRALGALEQVAPDKHTTLSGTSALMKLVCWHLESPIAQEEAFSHQADYVAA----HARGARGPGSI---VSDWNNALKAGFDVETLRWPGW---LLESKLG 902
S+ + G GFDFGTSGVR VV++ +S RW D +EW A L+ D+P A+R RV+RV SGTSASC++V+ + +TR PR+Y+++ L E E R+A + AP KH TLSGTS+LMK+V WHLE ++E HQAD+++A A A+ S VSDWNN LK G+D+ L +PGW LL+ +LG
Sbjct: 28 SKPRCGAGFDFGTSGVRLVVLEASETPTCVHQASFRWPHSQTVQDAEEWRLAMFRLLDDIPPAIRSRVARVAISGTSASCVVVNKANGA-ITRNPRLYNWDALRE--IPETGRKAKCLIADYAPAKHVTLSGTSSLMKVVSWHLEEAFHRDEVMLHQADFLSACLIHDASTAKREQSCFPRVSDWNNMLKLGYDMSALAYPGWFSPLLDDRLG 237
BLAST of mRNA_Ecto-sp13_S_contig8537.19940.1 vs. uniprot
Match: A0A1Z5JKG9_FISSO (FGGY_C domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JKG9_FISSO) HSP 1 Score: 142 bits (359), Expect = 2.510e-35 Identity = 87/206 (42.23%), Postives = 115/206 (55.83%), Query Frame = 3
Query: 327 VGFDFGTSGVRAVVIDVEGEVK-----FDSSLRWAAP---DDPDEWLRAADTLMGDVPLALRKRVSRVCFSGTSASCLLVDVHDPCRVTRGPRMYSYNTL--TEPISMEAARRALGALEQVAPDKHTTLSGTSALMKLVCWHLESPIAQEEAFSHQADYVA--------AHARGARGPGSIVSDWNNALKAGFDVETLRWPGWLLE 890
VGFD GTSG R +I + ++ W+ DDPD W+ A L+ + A V+ +CFSGTSASCLL+D + VTR PRMY Y+ +PI RAL LE AP +HTT S TS+L KL+ WH ++P+ ++EA +HQADY+A A G S+ SDW+N LK G+DV L WP WLL+
Sbjct: 32 VGFDLGTSGARISIIRPSNDSSSYQELHSDTVSWSDEKRYDDPDAWMSAVAILL-EGSAAYLSSVASICFSGTSASCLLIDRANAGAVTRRPRMYDYDVCHSVDPIY---GVRALTRLESFAPPQHTTRSPTSSLAKLLAWHEQTPLTKQEALAHQADYLALQFLSENKACGSGPSNFRSVSSDWHNCLKLGYDVRNLCWPSWLLD 233
BLAST of mRNA_Ecto-sp13_S_contig8537.19940.1 vs. uniprot
Match: A0A7S0Q2T4_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q2T4_9EUKA) HSP 1 Score: 133 bits (335), Expect = 4.340e-32 Identity = 79/202 (39.11%), Postives = 114/202 (56.44%), Query Frame = 3
Query: 318 QLGVGFDFGTSGVRAVVIDVEG-EVKFDSSLRWAAPD---DPDEWLRAADTLMGDVPLALRKRVSRVCFSGTSASCLLVDVHDPC-RVTRG-PRMYSYNTLTEPISMEAARRALGALEQVAPDKHTTLSGTSALMKLVCWHLESPIAQEEAFSHQADYVAAHARGARGPGSIVSDWNNALKAGFDVETLRWPGWLLESKLGE 905
+L +GFDFGTSG RAV++ +G V + ++W + +W+ A L+ +P LR RV+R+ SGTS++ L+ + V RG PRMY ++ + E RAL + AP H + TS L K++ W E+ + +E +HQADYVAA G G+ SDW+NALK GFDV +L +P WLL +LGE
Sbjct: 32 RLALGFDFGTSGARAVLLAADGTRVGTSADVKWGERERLQTASDWVEALSELLEQIPRDLRARVARIGVSGTSSTVLICERESGSPSVCRGAPRMYDFSVAKQAPG-ECGARALNLIAAHAPPLHAARAATSTLAKVLAWDAEAALTADEVVAHQADYVAAQLCGRAPDGTFRSDWHNALKLGFDVSSLCYPTWLLAGELGE 232
BLAST of mRNA_Ecto-sp13_S_contig8537.19940.1 vs. uniprot
Match: A0A7S2PKS0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PKS0_9STRA) HSP 1 Score: 133 bits (334), Expect = 9.910e-32 Identity = 79/205 (38.54%), Postives = 110/205 (53.66%), Query Frame = 3
Query: 327 VGFDFGTSGVRAVVI--------DVEGEVKFDSSLRWAAPDDPDEWLRAADTLMGDVPLALRKRVSRVCFSGTSASCLLVDVHDPCRVTRGPRMYSYNTLTEPISMEAARRALGALEQVAPDKHTTLSGTSALMKLVCWHLESPIAQE--------EAFSHQADYVAAHARG---ARGPGSIVSDWNNALKAGFDVETLRWPGWL 884
+GFDFGTSG R VI +++ EV DS + + DD DEW+ A L+ VP + + +C SGTSASC+LV+ +V+R PRMY Y+ + A R L + AP +HT + TS+L KL+ WH E + + E +HQAD++A H +R +VSDW+N LK G+DV L WP WL
Sbjct: 45 IGFDFGTSGARISVINRNNDRAIEIDNEVHSDSIVWQKSCDDADEWINAMHLLLSRVPTEMLRDTKAICASGTSASCVLVEKATG-KVSRKPRMYDYDVGNSSFGLNAMDR----LGKYAPSRHTAKARTSSLAKLISWHEEEHLYENDDGTNDNAEVLAHQADFLAMHLMSHGTSRKNYEVVSDWHNCLKLGYDVRKLEWPSWL 244
BLAST of mRNA_Ecto-sp13_S_contig8537.19940.1 vs. uniprot
Match: A0A7S1TVL8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVL8_9STRA) HSP 1 Score: 122 bits (306), Expect = 1.280e-29 Identity = 76/207 (36.71%), Postives = 107/207 (51.69%), Query Frame = 3
Query: 327 VGFDFGTSGVRAVVI----DVEGEVKFDSSLRWA--APDDPDEWLRAADTLMGDVPLALRKRVSRVCFSGTSASCLLVDVHDPCRVTRGPRMYSYNTLTEPISMEAARRALGALEQVAPDKHTTLSGTSALMKLVCWHLESPIAQEEAFSHQADYVAA-----------HARGARGPGSIV--SDWNNALKAGFDVETLRWPGWLLE 890
+G D GTSGVR + + D V + W+ A + W+ L+ P + + + V SGTSA+ L++D H RV R PRMY+Y +S A A+ +E AP HT + TS L KL+ WHLE+P++ + HQAD+ A + + P +V SDW+NALK G+DVE LRWPGWLL+
Sbjct: 16 IGLDLGTSGVRLMAVRAAADSRRVVVHTDEVAWSDDAGARSETWVAGMQQLLARCPPDVLEATASVAVSGTSATALIIDEHG--RVKRAPRMYNYA-----VSGSAGDEAMRIIEARAPKGHTVRARTSTLAKLLAWHLEAPLSPTDRLVHQADFAATVLCAGGAPFDEQQQSSEDPRGLVFASDWHNALKLGYDVENLRWPGWLLD 215
BLAST of mRNA_Ecto-sp13_S_contig8537.19940.1 vs. uniprot
Match: A0A0G4H317_VITBC (FGGY_C domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4H317_VITBC) HSP 1 Score: 126 bits (316), Expect = 2.880e-29 Identity = 79/209 (37.80%), Postives = 107/209 (51.20%), Query Frame = 3
Query: 330 GFDFGTSGVRAVVIDVEGEVKFDSSLRW--------------------AAPDDPDEWLRAADTLMGDVPLALRKRVSRVCFSGTSASCLLVDVHDPCRVTRGPRMYSYNTLTEPISMEAAR--RALGALEQVAPDKHTTLSGTSALMKLVCWHLESPIAQEEAFSHQADYVAAHARGAR--GPGSIVSDWNNALKAGFDVETLRWPGWL 884
G DFGTSG R VID + F S+RW A DP WL LM VP+ +R+ + + GTSA+ LLVD +VTRG R+Y+++ L E A RA + V+P S TS+ +K + W LE P+ +E +HQ D+V A+ R + GP +V+DWNNALK G+D ETL +P WL
Sbjct: 18 GIDFGTSGCRISVIDGDERELFSDSVRWHQLAASASSSTPTRQPHTDGALAADPSLWLAGLHRLMAAVPVEMRRSMRAIAVDGTSATVLLVDTTTG-KVTRGCRLYNWSALDEDEDEAPAEGPRAWAMAKAVSPPGSPACSPTSSFVKCLTWLLERPLDADEKIAHQCDFVLAYLRSSEEGGPMEVVTDWNNALKIGYDCETLSYPPWL 225 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8537.19940.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8537.19940.1 >prot_Ecto-sp13_S_contig8537.19940.1 ID=prot_Ecto-sp13_S_contig8537.19940.1|Name=mRNA_Ecto-sp13_S_contig8537.19940.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=258bp MKSNSSCRSAAFLALLALIRAAAGFTTSLLSSLASSHASVSRTPPQRHSTback to top mRNA from alignment at Ecto-sp13_S_contig8537:2113..6037+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8537.19940.1 ID=mRNA_Ecto-sp13_S_contig8537.19940.1|Name=mRNA_Ecto-sp13_S_contig8537.19940.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3925bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8537:2113..6037+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8537:2113..6037+ >mRNA_Ecto-sp13_S_contig8537.19940.1 ID=mRNA_Ecto-sp13_S_contig8537.19940.1|Name=mRNA_Ecto-sp13_S_contig8537.19940.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=774bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8537:2113..6037+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |