mRNA_Ecto-sp13_S_contig8532.19934.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig8532.19934.1
Unique NamemRNA_Ecto-sp13_S_contig8532.19934.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig8532.19934.1 vs. uniprot
Match: D7G3T0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3T0_ECTSI)

HSP 1 Score: 318 bits (815), Expect = 2.450e-105
Identity = 173/186 (93.01%), Postives = 175/186 (94.09%), Query Frame = 1
Query:  340 CMVELEVDFSEEDDPVEVEAEGPSSQSETEGAVSMANTVGTPPELLSATMREVKGPSNNRGRHELEGSAAVTPRRSSRGRQFSTQIAMMVLYSPEAMSSLGGLESQQMETTIAEAFVQTNQAMQNSGIPLEIVLVHVAQLPYSQESAALDILTGLTGSEEVESLRDAHSADLVQLIGDFTGSCGAG 897
            C VELEVDFSEEDDPVEVEAE PSSQSETE AVSMAN VGTPPELLSATMREVKGPS+NRG HELEG AAVTPRRSSRG Q STQ+AMMVLYSPEAMSSLGGLESQQMETTIAEAFVQTNQAM NS IPLEIVLVHVAQLPYSQESAALDILTGLT SEEVESLRDAHSADLVQLIGDFTGSCGAG
Sbjct:    7 CNVELEVDFSEEDDPVEVEAEEPSSQSETESAVSMANAVGTPPELLSATMREVKGPSHNRGGHELEGYAAVTPRRSSRGLQSSTQVAMMVLYSPEAMSSLGGLESQQMETTIAEAFVQTNQAMHNSDIPLEIVLVHVAQLPYSQESAALDILTGLTRSEEVESLRDAHSADLVQLIGDFTGSCGAG 192          
BLAST of mRNA_Ecto-sp13_S_contig8532.19934.1 vs. uniprot
Match: A0A6H5JF50_9PHAE (LNR domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF50_9PHAE)

HSP 1 Score: 341 bits (874), Expect = 4.100e-104
Identity = 207/441 (46.94%), Postives = 277/441 (62.81%), Query Frame = 1
Query:    1 VTSSIEVGELLCESLLEAPESTLLRFAINSNETVVATRTSFSVVDGDVFTDSIDRKVWIGDVVDPVPPSDSVPSTFSMTWTTPCDVETFLLKMTS----GSTQVR-SVPCAAGSSSDICMVELEVDFSEEDDPVEV-EAEGPSSQSETEGAVSMANTVGTPPELLSATMREVKGPSNNRGRHELEGSAAVTPRRSSRGRQFSTQIAMMVLYSPEAMSSLGGLESQQMETTIAEAFVQTNQAMQNSGIP-LEIVLVHVAQLPYSQ------ESAALDI---LTGLTGSEEVESLRDAHSADLVQLIGDFTGSCGAGYVFNGYPNSGFSVSRATCFENFTHTHEIGHNLGCRHDRENDADSEAEYAHGLRYCTGTNSYRTIMGL-----------DTDCNVPRVNYFSNPDVYYLGLPTGTSTENNARQITDNMLIVANFRGE 1242
            V   IE+G+LLC+SL +A +S+LLRF I+S ETV+A RTS+S +DG+V  D   RK W+G+VVDP P ++S+P T SMTWT PCD+ETFLLK+ S    GST +  SVPC+AGSSS+ICMVEL+  F +E D V+  ++   SS S+ +G+  +          +S T  E             EGS       S R  Q +T I +++ YSPEA SS  G+   Q+ T I E  V  NQA+ NS I  LE  LVHVA+LPYSQ      +S  +D+   L  L  +  V  LR+ +  DLVQL+G F G+CG GY+FNG    GFS+  + CF+NF+HTHEI HN+GC HDR+N ++++ EY HG RYCTG++ YRTIM             + D  VP+VNYFSNP+V YL  PTGT+T +NAR I ++M+ V+NFR +
Sbjct:  167 VMGDIELGDLLCDSLEDATDSSLLRFTISSTETVIAERTSYSSIDGNVLPDGNARKTWLGEVVDPEPSTNSIPRTVSMTWTDPCDIETFLLKLVSRNSDGSTSIATSVPCSAGSSSEICMVELQKFFYDESDAVDTSQSSSSSSTSKYQGSRMLKER------RVSTTFME-------------EGSRWSQGIPSDRSLQGTTVIDVLIFYSPEAASS-EGISDAQLLTRIVEGMVTLNQAITNSAIADLEYRLVHVAELPYSQMTYDPIDSDDIDLEPELDALAANSAVNDLRNEYQGDLVQLVGYFPGTCGLGYIFNGNAEFGFSLVGSNCFDNFSHTHEIAHNMGCYHDRDN-SETQDEYRHGYRYCTGSDPYRTIMSYYQNGCGGDPTPEADPIVPQVNYFSNPEVTYLNKPTGTATADNARCIEESMVAVSNFRAD 586          
BLAST of mRNA_Ecto-sp13_S_contig8532.19934.1 vs. uniprot
Match: A0A6H5JRC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRC1_9PHAE)

HSP 1 Score: 279 bits (714), Expect = 2.980e-82
Identity = 182/422 (43.13%), Postives = 244/422 (57.82%), Query Frame = 1
Query:   88 SNETVVATRTSFSVVDGDVFTDSIDRK-------------VWIGDVVDPVPPSDSVPSTFSMTWTTPCDVETFLLKMTS----GSTQV-RSVPCAAGSSSDICMVELEVDFSEEDDPVEVEAEGPSSQSETEGAVSMANTVGTPPELLSATMREVKGPSNNRGRHELEGSAAVTPRRSSRGRQFSTQIAMMVLYSPEAMSSLGGLESQQMETTIAEAFVQTNQAMQNSGIP-LEIVLVHVAQLPYSQ----ESAALDI---LTGLTGSEEVESLRDAHSADLVQLIGDFTGSCGAGYVFNGYPNSGFSVSRATCFENFTHTHEIGHNLGCRHDRENDADSEAEYAHGLRYCTGTNSYRTIMGL-----------DTDCNVPRVNYFSNPDVYYLGLPTGTSTENNARQITDNMLIVANFRGE 1242
            +++TV+A RTS+S +DG V +D I RK              W+G+VVDP P ++S+P T SMTWT PCD E+FLLK+ S    GST +  SVPC+AGSS++ICMVELE+ F +E              SETE             +  S  ++E +  +     +  EGS       S R  Q +T I ++++YSPEA  + G  E+Q + T I E  V  NQA+ NSGI  LE  LV VA+LPYSQ     S  +D+   L  L  +  V  LR+ +  DLVQL+G F G+CG GY+FNG    GFS+  + CF+NF+HTHEI HN+GC HD+ N +D++  Y HG RYC G + YRTIM             + D  VPRVNYFSNP+V YL   TGT+  +NAR I D+M+ V+ FR +
Sbjct:    5 TSQTVIAERTSYSSIDGSVLSDGITRKDELTGDGSHGLFQTWLGEVVDPEPSANSIPRTVSMTWTDPCDTESFLLKLVSRNADGSTSIFTSVPCSAGSSNEICMVELEMFFHDE--------------SETEDTXXXXXXXXXXKDQGSRMLKERRVSTT----YTEEGSLRSQGMSSDRRLQGTTVIDVLIVYSPEAAYARGIAEAQLL-TRIVEGMVTLNQAITNSGIAGLEYRLVQVAELPYSQMAYIPSDDIDLKPELDALAANSNVTDLRNQYQGDLVQLVGYFPGTCGLGYIFNGDAAFGFSLVDSNCFDNFSHTHEIAHNMGCYHDKNN-SDTQHAYRHGWRYCEGADPYRTIMSYYHNGCGGDPTSEDDPIVPRVNYFSNPNVTYLNKSTGTAAADNARCIEDSMVAVSEFRDD 406          
BLAST of mRNA_Ecto-sp13_S_contig8532.19934.1 vs. uniprot
Match: D8LLU0_ECTSI (PKD domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLU0_ECTSI)

HSP 1 Score: 226 bits (576), Expect = 1.110e-66
Identity = 151/361 (41.83%), Postives = 199/361 (55.12%), Query Frame = 1
Query:    1 VTSSIEVGELLCESLLEAPESTLLRFAINSNETVVATRTSFSVVDGDVFTDSIDRKVWIGDVVDPVPPSDSVPSTFSMTWTTPCDVETFLLKMTS----GSTQ-VRSVPCAAGSSSDICMVELEVDFSEEDDPVEVEAEGPSSQSETEGAVSMANTVGTPPELLSATMREVKGPSNNRGRHELEGSAAVTPRRSSRGRQFSTQIAMMVLYSPEAMSSLGGLESQQMETTIAEAFVQTNQAMQNSGIPLEIVLVHVAQLPYSQESAALDILTGLTGSEEVESLRDAHSADLVQLIGDFTGSCGAGYVFNGYPNSGFSVSRATCFENFTHTHEIGHNLGCRHDRENDADSEAEYAHGLRYCTG 1068
            V   I +GELLC+SL +A +STLLRF I+S ETV+A RTS+S +DG++F D   RK W+G+VVDP PP+ S P T SMTWT PC VE+FLL + S    GST  VRS+PCAAGSSS++CMVEL V F++ D  V+      S+ ++ +   SM  T+  P E                    +EG           GR   T  A       E++ S G   S++++               N+ +P + +L       Y  E      L  +TG+  V +LRD H ADLV L+G F  +CG G++FN     GFS+  + CF N+T THEIGHNLGCRHDR+N       Y HGLRYCTG
Sbjct:   79 VVVHIGLGELLCDSLEDASDSTLLRFNISSTETVIAERTSYSSIDGNIFPDGETRKTWMGEVVDPEPPAGSAPRTVSMTWTNPCGVESFLLTVVSHNNDGSTSIVRSIPCAAGSSSEVCMVELAVVFNDGDSAVD----SISADNDDDDFESM--TLENPGE-------------------SVEG---------QEGRMLKTIRAPTKSVGKESLHSRGSPGSRELQAG-------------NTQLPYDQMLDDTTD--YGPE------LDAMTGNAAVAALRDEHEADLVLLVGYFPNTCGRGWIFNFNEALGFSLMDSICFSNWTQTHEIGHNLGCRHDRDNSNTGMTAYGHGLRYCTG 384          
BLAST of mRNA_Ecto-sp13_S_contig8532.19934.1 vs. uniprot
Match: D8LMP2_ECTSI (Peptidyl-Asp metallopeptidase. metallo peptidase. MEROPS family M72 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMP2_ECTSI)

HSP 1 Score: 150 bits (379), Expect = 4.040e-40
Identity = 84/169 (49.70%), Postives = 108/169 (63.91%), Query Frame = 1
Query:  592 QIAMMVLYSPEAMSSLGGLESQQMETTIAEAFVQTNQAMQNSGIP-LEIVLVHVAQLPYSQ----ESAALDI---LTGLTGSEEVESLRDAHSADLVQLIGDFTGSCGAGYVFNGYPNSGFSVSRATCFENFTHTHEIGHNLGCRHDRENDADSEAEYAHGLRYCTGTN 1074
            +I +++ YSPEA SS  G+   Q+ T I E  V  NQA+ NS I  LE  LVHVA+LPYSQ     +  +D+   L  L    +V+ LRD +  DLVQL+G F G+CG GYVFNG    GFS+  + CF+NF+HTHEI HN+GC HDR N    +A + HG RYCTGT+
Sbjct:   12 KIDVLIFYSPEAASS-EGISDAQLLTRIVEGMVTLNQAITNSAIADLEYRLVHVAELPYSQMTYDPNDDIDLGPELDALAADSDVDDLRDQYQGDLVQLVGYFPGTCGLGYVFNGNAEYGFSLVGSNCFDNFSHTHEIAHNMGCYHDRLNSGPQDA-FRHGYRYCTGTD 178          
BLAST of mRNA_Ecto-sp13_S_contig8532.19934.1 vs. uniprot
Match: D8LC56_ECTSI (Peptidyl-Asp metalloendopeptidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC56_ECTSI)

HSP 1 Score: 155 bits (391), Expect = 4.530e-39
Identity = 131/453 (28.92%), Postives = 203/453 (44.81%), Query Frame = 1
Query:   31 LCESLLEAPESTLLRFAINSNETVVATRTSFSVVDGDVFTDSIDRKVWIGDVVDPVPPSDSVPSTFSMTWTTPCDVETFLLKMTS-----GSTQVRSVP---------CAAGSSSDICMVELEVDFSEEDDPVEVEAEGPS-SQSETEGAVSMANTVGTPPELLSAT------------------------MREVKGPS-------NNRGRHELEGSAAVTPRRSSRGRQFSTQIAMMVLYSPEAM--SSLG---GLESQQMETTIAEAFVQTNQAMQNSGIPLEIVLVHVAQLPYSQESAALDILTGLTGSEEVESLRDAHSADLVQLIGDFTGSCGAGYVF----NGYPNSGFSVSRATCFENFTHTHEIGHNLGCRHDRENDADSEA--EYAHGLRYCTGTNSYRTIMGLDTDC-NVPRVNYFSNPDVYYLGLPTGTSTENNARQITDNM 1215
            +C++L +A E+  L F+I + +TV+A   SF+ +             W G V +     D +P + SMTWT  C  + F+++M S     G   + S+P          A    + I  +++E D        +   E  +  Q     A+   + + TP  LL+                          ++E +  S       + RG   L     V P    R     T I ++VLY+ +AM  S  G   G    QME+ IA A+   N A+  SG+   + +VH+ Q P+ +  + +D +  +  +E V  LRD + ADLVQLIG +  +CG G+      +G+   G+SV    C  NF+H HE+GHN G  H++EN   S+    Y +  R C     +RTIM   + C + PRVN FSNPD+ Y     GT   +NAR + + M
Sbjct:    1 MCDTLEDAKEAKALEFSIGAGQTVIADLVSFTTI-------------WTGTVKESED-FDGLPRSISMTWTADCSTQNFVVQMISPAKDGGVDTMVSLPNPSNGENFLLATVHHNSIDEIDVEDDIGRRLQIADSVGEQTNLRQGVQRSALDDGSEILTPRRLLAKEAERGIERARLDDPDIDAKDNDIRQLQEYRSASPEGQEAFHERGLRRLSEDNVVMP--GGRVLSSETVIDVLVLYTEKAMLESDSGDGAGRSIAQMESDIATAYQGANNALSASGVNFSVRIVHMEQAPFDESDSIVDDVRAIQKNEGVHKLRDEYGADLVQLIGYYLNTCGVGFTMGSPSSGFAQYGYSVVHTNCLSNFSHIHELGHNFGANHNKENAGGSDGVDAYNYAYRNCEVGTKFRTIMAYSSGCPSTPRVNVFSNPDLTYANQRQGTENADNARVLNEAM 437          
BLAST of mRNA_Ecto-sp13_S_contig8532.19934.1 vs. uniprot
Match: D7FTV1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTV1_ECTSI)

HSP 1 Score: 141 bits (356), Expect = 1.170e-35
Identity = 118/308 (38.31%), Postives = 156/308 (50.65%), Query Frame = 1
Query:   13 IEVGELLCESLLEAPESTLLRFAINSNETVVATRTSFSVVDGDVFTDSIDRKVWIGDVVDPVPPSDSVPSTFSMTWTTPCDVETFLLKMTS----GSTQ-VRSVPCAAGSSSDICMVELEVDFSEEDDPVEVEAEGPSSQSETEGAVSMANTVGTPPELLSATMREVKGPSNNRGRHELEGSAAVTPRRSSRGRQFSTQIAMMVLYSPEAMSSLGGLESQQMETTIAEAFVQTNQAMQNSGIP-LEIVLVHVAQLPYSQ----ESAALDI---LTGLTGSEEVESLRDAHSADLVQLIGDFTGSCGAG 897
            IE+GELLC+SL +A +S+LLRF I+S ETV+A RTS+S +DG V +D I R                                +FLLK+ S    GST  V SVPC+AGSSS++CMVELE+ F +E + V+            +    M        + +S T  E             E S       S R  Q +T I ++++YSPEA  + G  E+Q + T I E  V  NQA+ NSGI  LE  LV VA+LPYSQ     S  +D+   L  L  +  V  LRD +  DLVQL+G F G+CG G
Sbjct:   13 IELGELLCDSLEDAADSSLLRFTISSTETVIAERTSYSSIDGSVLSDGITRM-------------------------------SFLLKLVSRNADGSTSIVTSVPCSAGSSSELCMVELEMFFHDESEAVDTTQSXXXXXXXKDQGSRMLKE-----QRVSMTYTE-------------EESLRSQGLPSDRSLQATTVIDVLIVYSPEAAYARGIAEAQLL-TRIVEGMVTLNQAITNSGIAGLEYRLVQVAELPYSQMTYVPSDDIDLKPELDALAANSNVTDLRDQYQGDLVQLVGYFPGTCGLG 270          
BLAST of mRNA_Ecto-sp13_S_contig8532.19934.1 vs. uniprot
Match: A0A6H5JDN0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDN0_9PHAE)

HSP 1 Score: 138 bits (348), Expect = 6.910e-33
Identity = 93/271 (34.32%), Postives = 130/271 (47.97%), Query Frame = 1
Query:  511 NNRGRHELEGSAAVTPRRSSRGRQFSTQIAMMVLYSPEAMSSLGGLESQ-----QMETTIAEAFVQTNQAMQNSGIPLEIVLVHVAQLPYSQESAALDILTGLTGSEEVESLRDAHSADLVQLIGDFTGSCGAGYVFN---------------GYPNSGF-----SVSRATCFENFTHTHEIGHNLGCRHDRENDADSEA--EYAHGLRYCTGTNSYRTIMGLDTDC-NVPRVNYFSNPDVYYLGLPTGTSTENNARQITDNMLIVANFRG 1239
            + RG   L     V P    R     T I ++VLY+ +AM     ++       QME+ IA A+   N A+  SG+   + +VH+ Q P+ +  + +D +  L  +E V  LRD + ADLVQLIG +  +CG G   +               G P+SGF     SV    C  NF+H HE+GHN G  H++EN   S     Y +  R C     +RTIM   + C + PRVN FSNPD+ Y     GT   NNAR + + M+   N  G
Sbjct:  169 HERGLRRLNEDNVVMP--GGRVLSSETVIDVLVLYTEKAMLESNSVDGAGRSIAQMESDIATAYQGANNALSASGVNFSVRIVHMEQAPFDESDSIVDDVRALQKNEGVHKLRDEYGADLVQLIGYYLNTCGVGSKVSSFFALYPARTHRFTMGTPSSGFAQYGYSVVHTNCLSNFSHIHELGHNFGANHNKENVGGSGGVDAYNYAYRNCDVGTKFRTIMAYSSGCPSTPRVNVFSNPDLTYANQRQGTENANNARVLNEAMVTDWNSLG 437          
BLAST of mRNA_Ecto-sp13_S_contig8532.19934.1 vs. uniprot
Match: D8LCP8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCP8_ECTSI)

HSP 1 Score: 133 bits (335), Expect = 4.420e-31
Identity = 102/312 (32.69%), Postives = 158/312 (50.64%), Query Frame = 1
Query:    1 VTSSIEVGELLCESLLEAPESTLLRFAINSNETVVATRTSFSVVDGDVFTDSIDRKVWIGDVVDPVPPS-DSVPSTFSMTWTTPCDVETFLLKMTS----GSTQ-VRSVPCAAGSSSDICMVELEVDFSEEDDPVEVEAEGPSSQSETEGAVSMANTVGTPPELLSATMREVKGPSNNRGRHELEGSAAVTPRRSSRGRQFSTQIAM-------MVLYSPEAMSSLGGLESQQMETTIAEAFVQTNQAMQNSGIPLEIVLVHVAQLPYSQESA--ALDILTGLTGSEEVESLRDAHSADLVQLIGDFTGSCG 891
            V   +++GELLC+SL++A ++ LL+FA+++NET++A RTS++VV G+ FT  + R++W G V+DP P + ++ P   SMTW   CDVETF LK++     G+T  V+SVPC   S  ++C+VE+  DF    +P+ V                  N+ G    +       + G   +R RH                                MVLY+  ++  L G+   QMET ++ A    N   +NS I +E   V+  +LPY Q+ A  +   L+ L   E V +LRD + AD+V L+   T +CG
Sbjct:  162 VLGEVQLGELLCDSLVQAEDAPLLQFALSANETIIANRTSYTVVSGETFTGGVGRRIWNGVVIDPEPDAGEAFPRGVSMTWGEVCDVETFSLKVSKHTVEGNTSAVKSVPCGL-SGVEVCLVEVAFDFLPGKEPLRVGV----------------NSTGQSTAVRRRLGDGILG-GGSRDRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMVLYTNMSLV-LMGVSDVQMETMVSAAISTVNVGFENSNIGIETTTVYKGRLPYYQDCADDSSTKLSALREDEGVNALRDEYGADIVLLVDYLTDACG 454          
BLAST of mRNA_Ecto-sp13_S_contig8532.19934.1 vs. uniprot
Match: D8LCC0_ECTSI (Peptidyl-Asp metalloendopeptidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCC0_ECTSI)

HSP 1 Score: 126 bits (317), Expect = 3.790e-28
Identity = 88/247 (35.63%), Postives = 116/247 (46.96%), Query Frame = 1
Query:  511 NNRGRHELEGSAAVTPRRSSRGRQFSTQIAMMVLYSPEAMSSLGG----LESQQMETTIAEAFVQTNQAMQNSGIPLEIVLVHVAQLPYSQESAALDILTGLTGSEEVESLRDAHSADLVQLIGDFTGSCGAGYVFNGYPNSGFSVSRATCFENFTHTHEIGHNLGCRHDRENDADSEAEYAHGLRYCTGTNSYRTIMGLDTDC-NVPRVNYFSNPDVYYLGLPTGTSTENNARQITDNMLIVANFR 1236
            + RG   L  +    P  S R    +T+I +MVLY+P AM S G     L +QQMET I  A+   N A+ +SGI   I +VHVA+  Y   +                                          F G+   G+S+    C +N +H HEIGHN+G  H+RE D  SE +YAH  RYCTG   YRTIM  +T C   PRV  FS  D  Y     GT++ +NAR I +++  V NFR
Sbjct:  216 HERGVRRLSSAEVQMP--SGRVLTATTEIDVMVLYTPAAMISSGTAGTLLTNQQMETEIITAYATANDALADSGISATINVVHVAEARYVMATPRA--------------------------------------AFEGF---GYSIVHTHCLDNLSHIHEIGHNMGANHNRE-DTSSEHDYAHAQRYCTGDTPYRTIMAYETGCLQAPRVAMFSTQDKTYASKSLGTTSTDNARVIEESLSTVVNFR 418          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8532.19934.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3T0_ECTSI2.450e-10593.01Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JF50_9PHAE4.100e-10446.94LNR domain-containing protein n=2 Tax=Ectocarpus s... [more]
A0A6H5JRC1_9PHAE2.980e-8243.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLU0_ECTSI1.110e-6641.83PKD domain protein n=1 Tax=Ectocarpus siliculosus ... [more]
D8LMP2_ECTSI4.040e-4049.70Peptidyl-Asp metallopeptidase. metallo peptidase. ... [more]
D8LC56_ECTSI4.530e-3928.92Peptidyl-Asp metalloendopeptidase n=1 Tax=Ectocarp... [more]
D7FTV1_ECTSI1.170e-3538.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JDN0_9PHAE6.910e-3334.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCP8_ECTSI4.420e-3132.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LCC0_ECTSI3.790e-2835.63Peptidyl-Asp metalloendopeptidase n=1 Tax=Ectocarp... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8532contigEcto-sp13_S_contig8532:372..6310 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score164.5
Seed ortholog evalue1.1e-37
Seed eggNOG ortholog2880.D8LC56
Model size1242
Hectar predicted targeting categoryother localisation
Exons13
EggNOG free text desc.Metallo-peptidase family M12B Reprolysin-like
EggNOG OGs2E79G@1,2SDWE@2759
Cds size1242
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8532.19934.1prot_Ecto-sp13_S_contig8532.19934.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig8532 372..6310 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464123.611609-CDS-Ecto-sp13_S_contig8532:371..4671681464123.611609-CDS-Ecto-sp13_S_contig8532:371..467Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8532 372..467 +
1681464123.6248775-CDS-Ecto-sp13_S_contig8532:739..8111681464123.6248775-CDS-Ecto-sp13_S_contig8532:739..811Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8532 740..811 +
1681464123.6382139-CDS-Ecto-sp13_S_contig8532:1084..11771681464123.6382139-CDS-Ecto-sp13_S_contig8532:1084..1177Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8532 1085..1177 +
1681464123.65276-CDS-Ecto-sp13_S_contig8532:1530..16201681464123.65276-CDS-Ecto-sp13_S_contig8532:1530..1620Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8532 1531..1620 +
1681464123.6646106-CDS-Ecto-sp13_S_contig8532:1946..20631681464123.6646106-CDS-Ecto-sp13_S_contig8532:1946..2063Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8532 1947..2063 +
1681464123.6757724-CDS-Ecto-sp13_S_contig8532:2425..25511681464123.6757724-CDS-Ecto-sp13_S_contig8532:2425..2551Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8532 2426..2551 +
1681464123.6900234-CDS-Ecto-sp13_S_contig8532:2936..30981681464123.6900234-CDS-Ecto-sp13_S_contig8532:2936..3098Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8532 2937..3098 +
1681464123.705705-CDS-Ecto-sp13_S_contig8532:3378..34901681464123.705705-CDS-Ecto-sp13_S_contig8532:3378..3490Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8532 3379..3490 +
1681464123.718832-CDS-Ecto-sp13_S_contig8532:4042..40701681464123.718832-CDS-Ecto-sp13_S_contig8532:4042..4070Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8532 4043..4070 +
1681464123.7289395-CDS-Ecto-sp13_S_contig8532:4479..45561681464123.7289395-CDS-Ecto-sp13_S_contig8532:4479..4556Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8532 4480..4556 +
1681464123.7416077-CDS-Ecto-sp13_S_contig8532:5061..51641681464123.7416077-CDS-Ecto-sp13_S_contig8532:5061..5164Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8532 5062..5164 +
1681464123.7579825-CDS-Ecto-sp13_S_contig8532:5829..59681681464123.7579825-CDS-Ecto-sp13_S_contig8532:5829..5968Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8532 5830..5968 +
1681464123.7688048-CDS-Ecto-sp13_S_contig8532:6283..63101681464123.7688048-CDS-Ecto-sp13_S_contig8532:6283..6310Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8532 6284..6310 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig8532.19934.1

>prot_Ecto-sp13_S_contig8532.19934.1 ID=prot_Ecto-sp13_S_contig8532.19934.1|Name=mRNA_Ecto-sp13_S_contig8532.19934.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=414bp
VTSSIEVGELLCESLLEAPESTLLRFAINSNETVVATRTSFSVVDGDVFT
DSIDRKVWIGDVVDPVPPSDSVPSTFSMTWTTPCDVETFLLKMTSGSTQV
RSVPCAAGSSSDICMVELEVDFSEEDDPVEVEAEGPSSQSETEGAVSMAN
TVGTPPELLSATMREVKGPSNNRGRHELEGSAAVTPRRSSRGRQFSTQIA
MMVLYSPEAMSSLGGLESQQMETTIAEAFVQTNQAMQNSGIPLEIVLVHV
AQLPYSQESAALDILTGLTGSEEVESLRDAHSADLVQLIGDFTGSCGAGY
VFNGYPNSGFSVSRATCFENFTHTHEIGHNLGCRHDRENDADSEAEYAHG
LRYCTGTNSYRTIMGLDTDCNVPRVNYFSNPDVYYLGLPTGTSTENNARQ
ITDNMLIVANFRGE
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mRNA from alignment at Ecto-sp13_S_contig8532:372..6310+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig8532.19934.1 ID=mRNA_Ecto-sp13_S_contig8532.19934.1|Name=mRNA_Ecto-sp13_S_contig8532.19934.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5939bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8532:372..6310+ (Ectocarpus species13 EcNAP12_S_4_19m)
GTCACGAGCAGTATCGAAGTGGGTGAACTGCTGTGCGAAAGCCTGCTCGA GGCACCGGAGTCCACTCTACTGCGGTTTGCCATAAACTCAAACGAGGTGA GAAAATAACGCTGTCGTCATGGCATTTATGTTCGCATGCACGAGTAGACT GCTGTGCATCGTCCATGCCAATTTTGAGAAAACAAGATCAAATCTTGTAA TGGAAAATCCCGGTTGGATGATCTTCACAGTCCCGGCACGACCACAAAAA GAGAAAAAAATGGCGAGCGGCGTTTGCCTTGAAACTATCGCTCATGTTCG ACAACCACAACCGTACTATAACCCACCCCCCGTCCCGCACGCCATGACAA TGTGAACCGTCTCGACAGACGGTGGTTGCTACGCGTACTTCTTTTTCCGT TGTCGATGGAGATGTTTTTACAGACAGCATCGATCGCAAGGTGGGGAACA GGCATGTGTCCGAGGCGAGAAGTCGAGCGTTCTCTCGTGCCGAGAGCGTT GTTTTGACAGACAGTAGTAGTACAGCAGTGGCGTTGATGGTGTACATGAA GACAGCGTGAATTAGCCCCCACAACGTTGATCAGGAGTTCTGTACCGTTC CCCGGCGACTCCATCCTCCATCGAGTGCCAGAAGATGCGTCAGTTACAGC ATGGAACGTGAACACGGGAGCTCCCGCGTTACGGTCTTTTCCTGTTGCCT TTCCGCCGCACAGGTGTGGATTGGAGACGTGGTCGACCCCGTGCCCCCAT CCGACTCCGTCCCCAGCACTTTCAGCATGACCTGGACCACCCCATGTGAT GTGGAGGTATGTTTTCCACGTGCTCGCTCAGTCAAGACCTCCACATGCTC ACATGTCCCATGAGCCCTGCGCCGAAGTCTTATTTGTACCTGCCTGGTAA AATGTTACATGGCACGTCAAGAGAGTCTCGGCAGAGACAAGCCTAACACC ACTCACTTGCCCAAGCACTACGAACGTTTGCGAGGAGAGCGTGGCACCTC CACAGAGACAGGCACTGACTGTCTTCCATGTCGCTATTCCACATCCAACA CAAACATATATATATATGGTCCTCGGGATTACATTGGGACCTCTCACGAC AGCGATGTTTTCGTGTATTGGCCCGTACTATCCGCCCCTGCTGGCTACCC ATCCCTCAGACCTTCTTGCTCAAGATGACGTCGGGTAGCACACAAGTGAG ATCGGTGCCATGTGCGGCGGGTTCAAGCAGCGACATCTGCATGGTTGAGG TGGGCTTCCGTGAGCTAAAAAAAAAGAAACAGAAACTTTCGCGTCCGTTG AACGCCGGCTCCCCTCTCGCGAGGGAATTCGCGACTCCAACAATCCGACC TTCTGTTCGAGAACGCCAGAGCAATCAACCAGAAATAATTCCCAGCCATG CCGACCACAGGTCAAAAATTGAAAAGAGTGTCTTGGCACCATTATCACCA TTATCAGCATATCTGCTCTGTTCTGACTTCTGACTGTGAATAAAAGAGGG CCCCGATTTCGTGGAATGCTCCAGAAGCCAAAGACCCCCGTCGCTCTCGG TGTTTCTGCACGCTGCGTCGTCCAGCTTGAGGTGGACTTTAGCGAGGAAG ACGATCCCGTCGAGGTGGAAGCAGAAGGACCTAGCTCGCAAAGCGAGACG GAGGGCGCTGTCAGCATGGCGAACACTGTCGGCACGCCTCCGGTAATATT GTCGAGTTTCGTTTTCGAACCTCGATTAGCACCCATTAAGAGGCCAACAT AACATGGCTGTTTCCTCGCTCCTGACGGCAGTGCAACACGGGCATCGTAA CCACTGCTGATAACAAGCGCTTTCCGCGCTGTTGTGATCGTTTGTCCGCA AATGGTCACCTTGGAATGCTGGACCACCCCAAGCTTCCGCGGCATGGCTC CCGTGGAGATCCCGGTGAACCGCATTTTCGATTTTTCGTGCACCACGACC ACCACCACCCCCACTTCAAGTTTGAATAGCATGAGGTGGGCTGTAGGCTC AACCGCACGCTAGTTTCCTTAACCTGTGGAACACGCACTACGAATTAATT GCAGGAGTTGCTGTCTGCGACGATGCGTGAGGTGAAAGGACCCTCAAACA ACCGAGGAAGACATGAGCTCGAGGGCAGTGCTGCTGTGACGCCAAGACGC AGCAGCCGCGGGCGACAGTTCTCTACTCAGGTACCTACGTCGGGAGCACG CTCAAAAGTAAAGACAGAGGAACTTAGCCATCAGCACCAGAAAATTTGGA GGACAATTATCAGTACTCGCAAGGCGAACGTGATATCATGAAATGCCGAT TCATCGATGTGGACTACAAGGAGCAGATAAACGTTGAGCGATCCCAAATA TAAAGGACCCTTCATGTTTCCAGTACTATGTGACGTTGAAAATGTTTGGA AACACCACGAAACCCCGGGGAAATGACCCATATCAAGCAAACGTACCACG TTTGGCTCACAGTCTGTGAGCTTATTCGTGAAGTAACTCCATGCCCGGCG TTTGCCCGATCCGCTCTTTTTTTCGGTACACATCCCGCACCGCACACCTC GCCCCTTTCGAGAAGATTGCTATGATGGTTCTCTACAGCCCAGAGGCGAT GAGCTCGCTGGGAGGCCTGGAGAGCCAGCAGATGGAGACAACGATCGCCG AAGCGTTCGTGCAGACGAATCAAGCCATGCAAAACTCGGGCATTCCCCTG GAGATCGTTCTCGTTCACGTCGCCCAGGTGAGGTGCTACGAGATGGAAAG CCAGCCGCTCCACGTTCCTTCACTGATTGGCTGCGACTTTTTTGACCGCT GGCTGTGTTCCATGTTCTGCAGAGACTCTTGAGTGAAACCTCGCTGACGA CATGCATGCCTCGAAGGCTGGCGGCGGAAATACCGACTTAAGAGTACAGA CATCGTTGGCCTTGCCTTGCTCTACCGTCGTGGCCTCGACTTGCATAGCC TCCAGCCGATTGGCAGAATCTGGCGGCGATCGTGCTGCTTCCTTTGCACC GTCGCAGCTCCCCTACTCCCAGGAGAGCGCTGCGCTAGACATCCTTACCG GCTTGACGGGAAGTGAGGAGGTGGAGAGCCTACGAGATGCGCATTCTGCC GATTTGGTGCAGCTGATAGGTGAGGACGGATCCCTATAGGAAGGGGATGG AGCCTACTCGTGGACAGTAGGGGGGTTGGGTAGCAGTCAAGTATCCATGG GTCATTCGGTAGAGAATCAGCCAAGCATGCATCGCTTATCCTTAATGAGA TGCTTATTTCGCAGTCCCGTGGCTGCGAGAGTAGAAGGCTGTTGATAGAT TTGTACATTTTTTCTCTCTGATTCGTTGAGGTTCGCTGGGCTCTTCGGGC CAAGAGCACGTCAGCTGCGTGAGCCGTTCGAGCTTGTGAAACGTTCCTGA CAGCAAGTAGTGCTGATTCACACCAACACATGCCTTGATGACCCCACTCC GGAGGCGCGCCTTGTACCTACTATTGACTGCTGTCAACACTCTTCGCTTT TCTGAAGAACGGTAGGCGGACCGTGCCTACTCTACGCGTACTATTGGCTG GCGGGGATTCATTCGCAAGACGCTGAACAACCGAGGTGTCCATGCTACGA CACTGCTGACTACAATCTAGTTAAAGCTTGATTCCCAACTTTTCGCCCTT ACCCTTTGCGAAAATTTTCAGGCGATTTCACGGGGTCCTGCGGTGCTGGG TGAGTCCAACATCGAGCACTTGGAGGCGAAGCCCGAGGCAGAAAATAGTT ATTCGAGCAGCAAATGTTGCAGCACTTGTTCCCTGCGCCAGCGACGTAGG GGTCCAAAAATGGAGGTTATGCCTCGATCTGTAATATTGTCAAACGCGCT GCCATTGGTTACAAACGCTATAGCTCTTTTTGTTTTGTTCGTGAAAGCTG TCGCTAGTATCTACAACGCGGATTTGAGCAACTGTGAAAGAAAGTGCTGC CGCGAAGAGAGAAGGACGTACCGTACCAGGATTCGACCCGGAGCGCCAGC TTGGAAGGCGGTTCACAACTGATATCGAACATCTCCGGATCCAACCAAAA GGTCACAACTCGCCGCCGTCTTCCCCCTGCCCGCAATCCCAACAATGGTG CCCCTCAGCTACGTTTTCAACGGCTACCCGAACTCAGGATTTTCTGTGTC GAGGGCAACCTGCTTTGAAAACTTTACCCATACACGTGAGAGGAAGAGAT GGGGTGGAAACGCGCGCGCGGATTTCGACAGAATAGTTTTTTTTTGTCGA CCTAATCGCGCGTGACGTAGCAAACGCAAACGAAGTCGTACGCATGAGGA ATCTTTTGCTCCACAAAGGAATGTGGGCAGTTATACAACTCCACCTACAC AGAACCGTGTGGAGAGCCACACTTGTTTGTGTAACGTAGGTGACGTAGCG TAAGATATCGCAACCCCCTGCATCGATTTCAAAGCTCGAGCACTCCACGG CAAAGAAGATGCAATAATCGATCGAGTGATCCACTATGGGAACGCTCTCG ATGACTCGGTTCCAACGCCGCCGTTTTGAGGCACCGCCGCCATGTTCCTA CCGAGTGTTTGGGCTTTGAAACCAATAAGGGGGTGAGGTATGTAAAACAA CTACGGTACGGACCCCGTGCTTTCGTACCGAAACAAACCTTGGGCTAACC CTTGATCACTATGTCTCTACCCCCCCTATGCTGGTCTCAGATGAGATCGG ACATAATTTAGGATGCAGGCACGACAGAGAAAACGATGCCGACAGCGAAG CCGAGTACGCTCATGGCTTGCGGTACTGCACGGGCACCAACAGGTACGCG CAAATGTCCCTCCCCCTGGCCATAGATGTATAAATTTGTTCGTGTCCCTC TGAACCGTCCTCTGATCTACCGTCATCGCGCGTGAATAGTGTACACCTCC TTGTAACAACACATCGATATCTGCGTGCCACCGAAGCTCAACTACCCTTC CCGCGCCAAATGAGGACAACTGACTTGACTCGGTGGTGTTTGGGGGTGTA TTCGAGCTATGTTGGCAGCAGGCAATGTGTGCGTATGACAGAGCCTGAGC GTTTCGTCGAGCCATCTACTCCTGCTTGCGGTTTCGCCTGTTGGCGCTCT GATTCTCGATACATGGAGACGCATCGAAAGGTGGTAGATATACAGCATAC TTCACTATGCTACAAGCCAGCGTAGTAGATGTGCAGCATACACATCCAAC GTGCTACAAGACAGCGCAAAAGTCAGCGCTGACTAAGCGCTGACTTCTAG AATGCGCTGAATCTTAGCATAGCGGACATGCTGTATAATTACCAGAGGGG GCGTCGCTTTGAATTTTCGCGTGGAAAGTTGTGCGGCACTTCTTGTGTCC CTACCTACCTACACAGATTCCGTGTCCGCAACAAGGGCGTGCAATGCTCA TGGAAAAGACGATGGTGATGCCCCTTCCCTGCCATTGAACCACACGTCGT GCCTTCAGCTACCGCACGATCATGGGCTTAGACACTGACTGCAACGTCCC AAGAGTGAACTACTTCTCGAACCCGGACGTGTACTACCTGGGCCTGCCGA CCGGAACCTCAACAGAAAACAACGCACGCCAGATCACGGACAACATGGTG AGAGTCGAGGACGACGACGACGACGACGACTCTGGTGCCTCCTAACGTGC GCAGAAATTTCTCGTGGAAAATTCTCGCCGTCAAGGGGGCCGGTCCGTGA ATCTCGGGCGGTGCCGCGTTTTCACAGCTTTTTTTTGTTCGCGTCTTGCA TTTAACGTGGAGCGCCCGTTCTTGCGACGTTGTTGCTCTCCTGCAGCCGG CCTCCTATAAATTACACCGCTTTTGCCACCCCCACCCAAAGGGAATCATG AAGCAGTGACATGACATGCCCGGCTCCCCACATCGTCAACTTGATGCACC CTCTCCTCACAGCTAATCGTGGCGAACTTCAGGGGGGAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8532:372..6310+

>mRNA_Ecto-sp13_S_contig8532.19934.1 ID=mRNA_Ecto-sp13_S_contig8532.19934.1|Name=mRNA_Ecto-sp13_S_contig8532.19934.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1242bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8532:372..6310+ (Ectocarpus species13 EcNAP12_S_4_19m)
GTCACGAGCAGTATCGAAGTGGGTGAACTGCTGTGCGAAAGCCTGCTCGA
GGCACCGGAGTCCACTCTACTGCGGTTTGCCATAAACTCAAACGAGACGG
TGGTTGCTACGCGTACTTCTTTTTCCGTTGTCGATGGAGATGTTTTTACA
GACAGCATCGATCGCAAGGTGTGGATTGGAGACGTGGTCGACCCCGTGCC
CCCATCCGACTCCGTCCCCAGCACTTTCAGCATGACCTGGACCACCCCAT
GTGATGTGGAGACCTTCTTGCTCAAGATGACGTCGGGTAGCACACAAGTG
AGATCGGTGCCATGTGCGGCGGGTTCAAGCAGCGACATCTGCATGGTTGA
GCTTGAGGTGGACTTTAGCGAGGAAGACGATCCCGTCGAGGTGGAAGCAG
AAGGACCTAGCTCGCAAAGCGAGACGGAGGGCGCTGTCAGCATGGCGAAC
ACTGTCGGCACGCCTCCGGAGTTGCTGTCTGCGACGATGCGTGAGGTGAA
AGGACCCTCAAACAACCGAGGAAGACATGAGCTCGAGGGCAGTGCTGCTG
TGACGCCAAGACGCAGCAGCCGCGGGCGACAGTTCTCTACTCAGATTGCT
ATGATGGTTCTCTACAGCCCAGAGGCGATGAGCTCGCTGGGAGGCCTGGA
GAGCCAGCAGATGGAGACAACGATCGCCGAAGCGTTCGTGCAGACGAATC
AAGCCATGCAAAACTCGGGCATTCCCCTGGAGATCGTTCTCGTTCACGTC
GCCCAGCTCCCCTACTCCCAGGAGAGCGCTGCGCTAGACATCCTTACCGG
CTTGACGGGAAGTGAGGAGGTGGAGAGCCTACGAGATGCGCATTCTGCCG
ATTTGGTGCAGCTGATAGGCGATTTCACGGGGTCCTGCGGTGCTGGCTAC
GTTTTCAACGGCTACCCGAACTCAGGATTTTCTGTGTCGAGGGCAACCTG
CTTTGAAAACTTTACCCATACACATGAGATCGGACATAATTTAGGATGCA
GGCACGACAGAGAAAACGATGCCGACAGCGAAGCCGAGTACGCTCATGGC
TTGCGGTACTGCACGGGCACCAACAGCTACCGCACGATCATGGGCTTAGA
CACTGACTGCAACGTCCCAAGAGTGAACTACTTCTCGAACCCGGACGTGT
ACTACCTGGGCCTGCCGACCGGAACCTCAACAGAAAACAACGCACGCCAG
ATCACGGACAACATGCTAATCGTGGCGAACTTCAGGGGGGAG
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