mRNA_Ecto-sp13_S_contig853.19931.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig853.19931.1
Unique NamemRNA_Ecto-sp13_S_contig853.19931.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig853.19931.1 vs. uniprot
Match: D7FLB9_ECTSI (Isocitrate lyase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLB9_ECTSI)

HSP 1 Score: 523 bits (1347), Expect = 9.000e-183
Identity = 251/254 (98.82%), Postives = 252/254 (99.21%), Query Frame = 1 
Query:    1 MPPASMYGQQLFGHNLKSHGAQVHAKTFNHDVEATKRWWGSPRFRYTKRPFSAEEVVSLRGTLPETYPSDIQARKLWELLEKKHALGDFSHTFGALDPVQVIEMAPHLETVYVSGWQCSSTASTSNEPGPDFADYPYDTVPNKVDQLFRAQRHHDRRQNDERCSMSEGERLSTPAVDYLRPIIADGDTGHGGLTAVMKLTKMFIEKGAAGIHFEDQKPGTKKCGHMGGKVLVSMQEHCDRLVAARLQADIMGTE 762
            MPPASMYGQQLFGHNLKSHGAQV AKTFNHDVEATKRWWGSPRFRYTKRPFSAEEVVSLRGTLPETYPSDIQARKLWELLEKKHALGDFSHTFGALDPVQVIEMAPHLETVYVSGWQCSSTASTSNEPGPDFADYPYDTVPNKVDQLFRAQRHHDRRQNDERCSMSEGE+LS PAVDYLRPIIADGDTGHGGLTAVMKLTKMFIEKGAAGIHFEDQKPGTKKCGHMGGKVLVSMQEHCDRLVAARLQADIMGTE
Sbjct:    1 MPPASMYGQQLFGHNLKSHGAQVQAKTFNHDVEATKRWWGSPRFRYTKRPFSAEEVVSLRGTLPETYPSDIQARKLWELLEKKHALGDFSHTFGALDPVQVIEMAPHLETVYVSGWQCSSTASTSNEPGPDFADYPYDTVPNKVDQLFRAQRHHDRRQNDERCSMSEGEQLSAPAVDYLRPIIADGDTGHGGLTAVMKLTKMFIEKGAAGIHFEDQKPGTKKCGHMGGKVLVSMQEHCDRLVAARLQADIMGTE 254
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BLAST of mRNA_Ecto-sp13_S_contig853.19931.1 vs. uniprot
Match: A0A835YPK9_9STRA (Isocitrate lyase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPK9_9STRA)

HSP 1 Score: 363 bits (931), Expect = 3.000e-120
Identity = 174/228 (76.32%), Postives = 195/228 (85.53%), Query Frame = 1 
Query:   82 FNHDVEATKRWWGSPRFRYTKRPFSAEEVVSLRGTLPETYPSDIQARKLWELLEKKHALGDFSHTFGALDPVQVIEMAPHLETVYVSGWQCSSTASTSNEPGPDFADYPYDTVPNKVDQLFRAQRHHDRRQNDERCSMSEGERLSTPA-VDYLRPIIADGDTGHGGLTAVMKLTKMFIEKGAAGIHFEDQKPGTKKCGHMGGKVLVSMQEHCDRLVAARLQADIMGTE 762
            F  +V   K+WW  PRFR TKRP++AEE V +RGTLPET+ S++ A+KLW  LE       F+HTFGALDPVQVIEMAPHL+TVYVSGWQCSSTA+++NEPGPDFADYP DTVP KVDQLFRAQRHHDRRQ +ER  M+  ER +  A VDYLRP++ADGDTGHGGLTAVMKLTKMF+E GAAGIHFEDQKPGTKKCGHMGGKVLVSMQEHCDRLVAARLQADIMGT+
Sbjct:   19 FAREVAGVKQWWSGPRFRDTKRPYTAEEAVGMRGTLPETFASNLMAQKLWAELEACRDRKGFTHTFGALDPVQVIEMAPHLKTVYVSGWQCSSTAASNNEPGPDFADYPMDTVPRKVDQLFRAQRHHDRRQREERQRMTPAERAAAGAPVDYLRPMVADGDTGHGGLTAVMKLTKMFVEAGAAGIHFEDQKPGTKKCGHMGGKVLVSMQEHCDRLVAARLQADIMGTD 246
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BLAST of mRNA_Ecto-sp13_S_contig853.19931.1 vs. uniprot
Match: A0A0F7S1P4_9BASI (Isocitrate lyase n=15 Tax=Ustilaginales TaxID=5267 RepID=A0A0F7S1P4_9BASI)

HSP 1 Score: 341 bits (875), Expect = 4.010e-112
Identity = 163/234 (69.66%), Postives = 188/234 (80.34%), Query Frame = 1 
Query:   61 AQVHAKTFNHDVEATKRWWGSPRFRYTKRPFSAEEVVSLRGTLPETYPSDIQARKLWELLEKKHALGDFSHTFGALDPVQVIEMAPHLETVYVSGWQCSSTASTSNEPGPDFADYPYDTVPNKVDQLFRAQRHHDRRQNDERCSMSEGERLSTPAVDYLRPIIADGDTGHGGLTAVMKLTKMFIEKGAAGIHFEDQKPGTKKCGHMGGKVLVSMQEHCDRLVAARLQADIMGTE 762
            A    K F  +VEA K+WW +PRF  T RP++AE+VVS RGTL +TYPSD+Q +KLW+ LE   A G  SHT+GALDPVQV +MA HLETVYVSGWQCSSTAS++NEPGPD ADYPY+TVP KV+ LF AQ  HDR+Q +ER +MS  +R  TP VDYLRPI+AD DTGHGGLTAVMKLTK+F+EKGAAGIH EDQ PGTKKCGHM GKVLV +QEH +RLVA RLQ DIMG E
Sbjct:    2 ADQELKLFQEEVEAVKQWWKNPRFANTTRPYTAEQVVSKRGTLKQTYPSDVQGKKLWKTLEAHAAKGTTSHTYGALDPVQVTQMAKHLETVYVSGWQCSSTASSTNEPGPDLADYPYNTVPLKVEHLFMAQLFHDRKQREERSNMSPEQRAKTPVVDYLRPIVADADTGHGGLTAVMKLTKLFVEKGAAGIHIEDQAPGTKKCGHMAGKVLVPIQEHINRLVAIRLQYDIMGVE 235
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BLAST of mRNA_Ecto-sp13_S_contig853.19931.1 vs. uniprot
Match: A0A1C7NK18_9FUNG (Isocitrate lyase n=1 Tax=Choanephora cucurbitarum TaxID=101091 RepID=A0A1C7NK18_9FUNG)

HSP 1 Score: 336 bits (861), Expect = 5.820e-110
Identity = 157/227 (69.16%), Postives = 182/227 (80.18%), Query Frame = 1 
Query:   82 FNHDVEATKRWWGSPRFRYTKRPFSAEEVVSLRGTLPETYPSDIQARKLWELLEKKHALGDFSHTFGALDPVQVIEMAPHLETVYVSGWQCSSTASTSNEPGPDFADYPYDTVPNKVDQLFRAQRHHDRRQNDERCSMSEGERLSTPAVDYLRPIIADGDTGHGGLTAVMKLTKMFIEKGAAGIHFEDQKPGTKKCGHMGGKVLVSMQEHCDRLVAARLQADIMGTE 762
            F  +VE  K+WW SPRF+  KRP++AE +VS RGT P  Y S++QA+KLW +L+   A G+ SHTFGALDPVQV +MAPHL+TVYVSGWQCSSTASTSNEPGPD ADYP DTVPNKV+ LF AQ  HDR+Q + R SM+  ER  TP +DYLRPIIADGDTGHGG+TAVMKLTKMF+E+GAAGIH EDQ P TKKCGHM GKVLV + EH +RLVA R Q DIMG +
Sbjct:   11 FQQEVERMKQWWASPRFKLVKRPYTAESIVSKRGTFPTEYRSNVQAKKLWGILQNNKATGNTSHTFGALDPVQVTQMAPHLDTVYVSGWQCSSTASTSNEPGPDLADYPMDTVPNKVEHLFFAQLFHDRKQREARLSMTPEERAKTPKIDYLRPIIADGDTGHGGITAVMKLTKMFVERGAAGIHVEDQSPSTKKCGHMAGKVLVPISEHINRLVAIRAQCDIMGVD 237
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BLAST of mRNA_Ecto-sp13_S_contig853.19931.1 vs. uniprot
Match: A0A8H7RFA7_9FUNG (Isocitrate lyase n=1 Tax=Mucor saturninus TaxID=64648 RepID=A0A8H7RFA7_9FUNG)

HSP 1 Score: 336 bits (861), Expect = 5.990e-110
Identity = 156/227 (68.72%), Postives = 184/227 (81.06%), Query Frame = 1 
Query:   82 FNHDVEATKRWWGSPRFRYTKRPFSAEEVVSLRGTLPETYPSDIQARKLWELLEKKHALGDFSHTFGALDPVQVIEMAPHLETVYVSGWQCSSTASTSNEPGPDFADYPYDTVPNKVDQLFRAQRHHDRRQNDERCSMSEGERLSTPAVDYLRPIIADGDTGHGGLTAVMKLTKMFIEKGAAGIHFEDQKPGTKKCGHMGGKVLVSMQEHCDRLVAARLQADIMGTE 762
            F  +V+  K+WW SPRF+  KRP++AE +VS RG  P  Y S+ QA+KLW++L++  A G  SHTFGALDPVQV +MAPHL+TVYVSGWQCSSTASTSNEPGPD ADYP DTVPNKV+ LF AQ  HDR+Q ++R SMS  ER  TP +DYLRP+IADGDTGHGG+TA+MKLTKMF+E+GAAGIH EDQ PGTKKCGHM GKVLV + EH +RLVA R+Q DIMG E
Sbjct:   11 FQQEVDRVKQWWASPRFKLVKRPYTAESIVSKRGNFPVEYRSNTQAKKLWKILQQNKATGGTSHTFGALDPVQVTQMAPHLDTVYVSGWQCSSTASTSNEPGPDLADYPMDTVPNKVEHLFFAQLFHDRKQREDRLSMSAEERAKTPKIDYLRPMIADGDTGHGGITAIMKLTKMFVERGAAGIHVEDQSPGTKKCGHMAGKVLVPIAEHINRLVAIRVQYDIMGVE 237
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BLAST of mRNA_Ecto-sp13_S_contig853.19931.1 vs. uniprot
Match: A0A8H7S4C1_9FUNG (Isocitrate lyase n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7S4C1_9FUNG)

HSP 1 Score: 335 bits (859), Expect = 1.160e-109
Identity = 156/227 (68.72%), Postives = 185/227 (81.50%), Query Frame = 1 
Query:   82 FNHDVEATKRWWGSPRFRYTKRPFSAEEVVSLRGTLPETYPSDIQARKLWELLEKKHALGDFSHTFGALDPVQVIEMAPHLETVYVSGWQCSSTASTSNEPGPDFADYPYDTVPNKVDQLFRAQRHHDRRQNDERCSMSEGERLSTPAVDYLRPIIADGDTGHGGLTAVMKLTKMFIEKGAAGIHFEDQKPGTKKCGHMGGKVLVSMQEHCDRLVAARLQADIMGTE 762
            F  +VE  K+WW SPRF+  KRP++AE++VS RGT+P  Y S++QA+KLWE+L++    G+ SHTFGALDPVQV +MAPHL+TVYVSGWQCSSTAS+SNEPGPD ADYP DTVPNKV+ LF AQ  HDR+Q + R SMS  ER  TP +DYLRP+IAD DTGHGG+TAVMKLTKMF+E+GAAGIH EDQ P TKKCGHM GKVLV + EH +RLVA R+Q DIMG E
Sbjct:   11 FRQEVEKVKQWWSSPRFKLVKRPYTAEQIVSKRGTIPTEYRSNLQAKKLWEILQQNKRSGNTSHTFGALDPVQVTQMAPHLDTVYVSGWQCSSTASSSNEPGPDLADYPMDTVPNKVEHLFFAQLFHDRKQREARLSMSPEERAKTPKIDYLRPMIADADTGHGGVTAVMKLTKMFVERGAAGIHVEDQSPSTKKCGHMAGKVLVPVSEHINRLVAIRVQYDIMGVE 237
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BLAST of mRNA_Ecto-sp13_S_contig853.19931.1 vs. uniprot
Match: A0A1X2HP64_SYNRA (Isocitrate lyase n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HP64_SYNRA)

HSP 1 Score: 334 bits (857), Expect = 2.260e-109
Identity = 155/227 (68.28%), Postives = 184/227 (81.06%), Query Frame = 1 
Query:   82 FNHDVEATKRWWGSPRFRYTKRPFSAEEVVSLRGTLPETYPSDIQARKLWELLEKKHALGDFSHTFGALDPVQVIEMAPHLETVYVSGWQCSSTASTSNEPGPDFADYPYDTVPNKVDQLFRAQRHHDRRQNDERCSMSEGERLSTPAVDYLRPIIADGDTGHGGLTAVMKLTKMFIEKGAAGIHFEDQKPGTKKCGHMGGKVLVSMQEHCDRLVAARLQADIMGTE 762
            F  +VE  K+WW SPRF+  KRP++AE +VS RGT+ ++Y SD QA+KLW++L+   A G+ SHTFGALDPVQ+ +MAPHL+TVYVSGWQCSSTASTSNEPGPD ADYP DTVPNKV+ LF AQ  HDR+Q + R +M+  ER  TP +DYLRPIIADGDTGHGG+TAVMKL KMF+E+GA+GIH EDQ PGTKKCGHM GKVLV + EH +RLVA R Q DIMG E
Sbjct:   10 FRQEVEQVKQWWSSPRFKLVKRPYTAESIVSKRGTIKQSYASDTQAKKLWKILQHNKATGNTSHTFGALDPVQITQMAPHLDTVYVSGWQCSSTASTSNEPGPDLADYPMDTVPNKVEHLFFAQLFHDRKQREARLAMTPEERAKTPKIDYLRPIIADGDTGHGGITAVMKLAKMFVERGASGIHVEDQAPGTKKCGHMAGKVLVPIGEHINRLVAIRAQYDIMGVE 236
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BLAST of mRNA_Ecto-sp13_S_contig853.19931.1 vs. uniprot
Match: A0A7R9U2N8_9STRA (Isocitrate lyase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2N8_9STRA)

HSP 1 Score: 335 bits (859), Expect = 3.260e-109
Identity = 156/227 (68.72%), Postives = 187/227 (82.38%), Query Frame = 1 
Query:   82 FNHDVEATKRWWGSPRFRYTKRPFSAEEVVSLRGTLPETYPSDIQARKLWELLEKKHALGDFSHTFGALDPVQVIEMAPHLETVYVSGWQCSSTASTSNEPGPDFADYPYDTVPNKVDQLFRAQRHHDRRQNDERCSMSEGERLSTPAVDYLRPIIADGDTGHGGLTAVMKLTKMFIEKGAAGIHFEDQKPGTKKCGHMGGKVLVSMQEHCDRLVAARLQADIMGTE 762
            ++ +  A +RWW S R++ T+RP+SAE VV+LRG++  T P+++ ARKLW LL +    G +SHTFGALDPVQV+ MAP L ++YVSGWQCSSTAST+NEPGPD A YP DTVPNKVDQLFRAQ HHDR+Q +ER  M+  +R S P VDYL PI+ADGDTGHGG  A+M L KMFIE+GAAG+HFEDQK GTKKCGHMGGKVLV++QEHCDRL+AARLQADIMGTE
Sbjct:   29 YDAEARAVERWWSSARWQNTRRPYSAEVVVALRGSITPTLPANVTARKLWALLHELAPRGGYSHTFGALDPVQVVSMAPQLSSIYVSGWQCSSTASTNNEPGPDLAAYPMDTVPNKVDQLFRAQLHHDRKQREERSRMTPEQRASQPPVDYLTPIVADGDTGHGGHIALMNLMKMFIERGAAGVHFEDQKAGTKKCGHMGGKVLVAVQEHCDRLIAARLQADIMGTE 255
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BLAST of mRNA_Ecto-sp13_S_contig853.19931.1 vs. uniprot
Match: S2JPI1_MUCC1 (Isocitrate lyase n=5 Tax=Mucor TaxID=4830 RepID=S2JPI1_MUCC1)

HSP 1 Score: 333 bits (855), Expect = 4.800e-109
Identity = 157/227 (69.16%), Postives = 182/227 (80.18%), Query Frame = 1 
Query:   82 FNHDVEATKRWWGSPRFRYTKRPFSAEEVVSLRGTLPETYPSDIQARKLWELLEKKHALGDFSHTFGALDPVQVIEMAPHLETVYVSGWQCSSTASTSNEPGPDFADYPYDTVPNKVDQLFRAQRHHDRRQNDERCSMSEGERLSTPAVDYLRPIIADGDTGHGGLTAVMKLTKMFIEKGAAGIHFEDQKPGTKKCGHMGGKVLVSMQEHCDRLVAARLQADIMGTE 762
            F  +VE  K+WW SPRF+  KRP++AE +VS RG  P  Y S++QA+KLW+ L++  A G  SHTFGALDPVQV +MAPHL+TVYVSGWQCSSTAS+SNEPGPD ADYP DTVPNKV+ LF AQ  HDR+Q + R SM+  ER  TP +DYLRPIIADGDTGHGG+TAVMKLTKMF+E+GAAGIH EDQ PGTKKCGHM GKVLV + EH +RLVA R Q DIMG E
Sbjct:   11 FEQEVERVKQWWASPRFKLVKRPYTAESIVSKRGYFPVEYRSNVQAKKLWKTLQQNKATGQTSHTFGALDPVQVTQMAPHLDTVYVSGWQCSSTASSSNEPGPDLADYPMDTVPNKVEHLFFAQLFHDRKQREARLSMTPEERAKTPKIDYLRPIIADGDTGHGGITAVMKLTKMFVERGAAGIHVEDQAPGTKKCGHMAGKVLVPIAEHINRLVAIRAQYDIMGVE 237
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BLAST of mRNA_Ecto-sp13_S_contig853.19931.1 vs. uniprot
Match: A0A0B7NI92_9FUNG (Isocitrate lyase n=1 Tax=Parasitella parasitica TaxID=35722 RepID=A0A0B7NI92_9FUNG)

HSP 1 Score: 333 bits (855), Expect = 4.800e-109
Identity = 156/227 (68.72%), Postives = 183/227 (80.62%), Query Frame = 1 
Query:   82 FNHDVEATKRWWGSPRFRYTKRPFSAEEVVSLRGTLPETYPSDIQARKLWELLEKKHALGDFSHTFGALDPVQVIEMAPHLETVYVSGWQCSSTASTSNEPGPDFADYPYDTVPNKVDQLFRAQRHHDRRQNDERCSMSEGERLSTPAVDYLRPIIADGDTGHGGLTAVMKLTKMFIEKGAAGIHFEDQKPGTKKCGHMGGKVLVSMQEHCDRLVAARLQADIMGTE 762
            F  +VE  K+WW SPRF+  KRP++AE +VS RG  P  Y S +QA+KLW++L++    G+ SHTFGALDPVQV +MAP+L+TVYVSGWQCSSTASTSNEPGPD ADYP DTVPNKV+ LF AQ  HDR+Q + R +M+  ER  TPA+DYLRPIIADGDTGHGG+TAVMKLTKMF+E+GAAGIH EDQ PGTKKCGHM GKVLV + EH +RLVA R Q DIMG E
Sbjct:   11 FQQEVEKVKQWWASPRFKLVKRPYTAESIVSKRGYFPTEYRSSVQAKKLWKILQQNKENGETSHTFGALDPVQVTQMAPYLDTVYVSGWQCSSTASTSNEPGPDLADYPMDTVPNKVEHLFYAQLFHDRKQREARLAMTPEERAETPAIDYLRPIIADGDTGHGGITAVMKLTKMFVERGAAGIHVEDQAPGTKKCGHMAGKVLVPISEHINRLVAIRAQYDIMGVE 237
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig853.19931.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLB9_ECTSI9.000e-18398.82Isocitrate lyase n=2 Tax=Ectocarpus TaxID=2879 Rep... [more]
A0A835YPK9_9STRA3.000e-12076.32Isocitrate lyase n=2 Tax=Tribonema minus TaxID=303... [more]
A0A0F7S1P4_9BASI4.010e-11269.66Isocitrate lyase n=15 Tax=Ustilaginales TaxID=5267... [more]
A0A1C7NK18_9FUNG5.820e-11069.16Isocitrate lyase n=1 Tax=Choanephora cucurbitarum ... [more]
A0A8H7RFA7_9FUNG5.990e-11068.72Isocitrate lyase n=1 Tax=Mucor saturninus TaxID=64... [more]
A0A8H7S4C1_9FUNG1.160e-10968.72Isocitrate lyase n=1 Tax=Mucor circinatus TaxID=20... [more]
A0A1X2HP64_SYNRA2.260e-10968.28Isocitrate lyase n=1 Tax=Syncephalastrum racemosum... [more]
A0A7R9U2N8_9STRA3.260e-10968.72Isocitrate lyase n=1 Tax=Pinguiococcus pyrenoidosu... [more]
S2JPI1_MUCC14.800e-10969.16Isocitrate lyase n=5 Tax=Mucor TaxID=4830 RepID=S2... [more]
A0A0B7NI92_9FUNG4.800e-10968.72Isocitrate lyase n=1 Tax=Parasitella parasitica Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig853contigEcto-sp13_S_contig853:15833..20754 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score525.8
Seed ortholog evalue1.1e-146
Seed eggNOG ortholog2880.D7FLB9
Preferred nameICL1
Model size765
KEGG rclassRC00311,RC00313
KEGG koko:K01637
KEGG ReactionR00479
KEGG Pathwayko00630,ko01100,ko01110,ko01120,ko01200,map00630,map01100,map01110,map01120,map01200
KEGG ModuleM00012
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004451,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005777,GO:0005782,GO:0005975,GO:0006081,GO:0006082,GO:0006083,GO:0006097,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009514,GO:0009987,GO:0015976,GO:0016042,GO:0016054,GO:0016829,GO:0016830,GO:0016833,GO:0016999,GO:0017001,GO:0017144,GO:0019541,GO:0019543,GO:0019626,GO:0019629,GO:0019752,GO:0031907,GO:0031974,GO:0032787,GO:0042579,GO:0042737,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044262,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044429,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0045733,GO:0046395,GO:0046421,GO:0046459,GO:0046487,GO:0070013,GO:0071704,GO:0072329,GO:1901575
Exons7
EggNOG free text desc.isocitrate lyase activity
EggNOG OGsCOG2513@1,KOG1260@2759
Ec32 ortholog descriptionIsocitrate lyase (Isocitrase) (Isocitratase) (ICL)
Ec32 orthologEc-12_007550.1
EC4.1.3.1
Cds size765
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig853.19931.1prot_Ecto-sp13_S_contig853.19931.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig853 15833..20754 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464123.4298074-CDS-Ecto-sp13_S_contig853:15832..159251681464123.4298074-CDS-Ecto-sp13_S_contig853:15832..15925Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig853 15833..15925 +
1681464123.4419937-CDS-Ecto-sp13_S_contig853:17670..177931681464123.4419937-CDS-Ecto-sp13_S_contig853:17670..17793Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig853 17671..17793 +
1681464123.4513214-CDS-Ecto-sp13_S_contig853:17980..180641681464123.4513214-CDS-Ecto-sp13_S_contig853:17980..18064Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig853 17981..18064 +
1681464123.461103-CDS-Ecto-sp13_S_contig853:18515..185891681464123.461103-CDS-Ecto-sp13_S_contig853:18515..18589Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig853 18516..18589 +
1681464123.4723911-CDS-Ecto-sp13_S_contig853:18958..190641681464123.4723911-CDS-Ecto-sp13_S_contig853:18958..19064Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig853 18959..19064 +
1681464123.4840019-CDS-Ecto-sp13_S_contig853:19722..198931681464123.4840019-CDS-Ecto-sp13_S_contig853:19722..19893Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig853 19723..19893 +
1681464123.494871-CDS-Ecto-sp13_S_contig853:20640..207541681464123.494871-CDS-Ecto-sp13_S_contig853:20640..20754Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig853 20641..20754 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig853.19931.1

>prot_Ecto-sp13_S_contig853.19931.1 ID=prot_Ecto-sp13_S_contig853.19931.1|Name=mRNA_Ecto-sp13_S_contig853.19931.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=255bp
MPPASMYGQQLFGHNLKSHGAQVHAKTFNHDVEATKRWWGSPRFRYTKRP
FSAEEVVSLRGTLPETYPSDIQARKLWELLEKKHALGDFSHTFGALDPVQ
VIEMAPHLETVYVSGWQCSSTASTSNEPGPDFADYPYDTVPNKVDQLFRA
QRHHDRRQNDERCSMSEGERLSTPAVDYLRPIIADGDTGHGGLTAVMKLT
KMFIEKGAAGIHFEDQKPGTKKCGHMGGKVLVSMQEHCDRLVAARLQADI
MGTEV
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mRNA from alignment at Ecto-sp13_S_contig853:15833..20754+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig853.19931.1 ID=mRNA_Ecto-sp13_S_contig853.19931.1|Name=mRNA_Ecto-sp13_S_contig853.19931.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4922bp|location=Sequence derived from alignment at Ecto-sp13_S_contig853:15833..20754+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCCGCCAGCGTCGATGTACGGGCAGCAGCTCTTCGGGCATAACCTCAA
GTCGCACGGAGCGCAAGTCCATGCCAAAACGTTCAACCACGATGTGAGGC
CGGGGGAGGAGTGCTTATCAAGAAGCGTGGTCGATGGGCGTGGCCTAGAA
GTTGCTGAGCGGTTGCGATCTCGGCGAAATTTATACTGTTGTTTTGGAAA
TAGAGCGGAACACCGTTGATCCCACGGCAAGCCCAACCAATTTTAGGAAT
CTGGGTTGGTTGCTTCGCACCGGACACGAGAGACTGACGCTCATGCCAGC
TCATCATTGCACGGAGGCTCTCGGCTGTATTTCGCGGTGTGTGGATGTCC
TGTAGAAACACCGTCCCTTGAGAACTGTTTTTTCTTCGTTTGGCCTTGTG
GCATAGCCCTGACAAAGTTCAACGGACGGTGTCGAGCGGGTTCCAGCTCT
AGTTGAAGGAGTTCAGACGTCCAGCCTCCTAGGTTGTACAAGGGGGCGGA
TCCTCAAAGCACCTCCGTAACAAACACCGATGAAGGAAAGGCCCTTGGTA
GCTTTTCCTACACGCCCAACGTGTAGTAAAGGGAGGTTGTTCCAACGTGT
TTGTTCGCGCGACACGGTACTACTACTACTGTACAACTATCGTACGTTTC
AAAGAGAGGAGCACGCGGAACTTGAACAGAAACTGCGGTTCTCTATAACG
CGGAAGTCATACAACACGCCAGGGAGTGCGTGCGTACAGTGGTCCCCGCC
AAGGATCCCGCCGGGCGCGCGTATGAAGGCGTCCATTCTAACCACGTCTT
TCAAAACGGTAGCAGTTTGTTGACGAATTCAAGATCAGCTCGCAAATAAG
AAAACTCACAACCTTTTTCCTTTCTCGGGGCTTTTTGCGCGAAACGATCC
AACCGTCGAGGGCGTGGGTGCTTGCGAGAGAGATGTCTTACGCTGTCATC
ACATCGATCTGTTAACTTTTGACGGCGGTTGCTCATCTTAAGATGCTGCA
GCGTGCAGGATAAGACGCTCTTGTCTCGGCCCCACCTCCACGAGTCGTTG
CTTTTTTTGTTTGTTTCTTGAAGATTGGGTTGAAGTTGCAGCTCTTCCTT
TGGGTTTAACATCAACCCGAACTATGCTTGCTTTATGTCAGAGTAATCTA
TTTATGATTTATCTTACATCTACGTGTTCTCACAACCGGTTCGTTGCGAT
GAACATGACGACGGCTTTGTTGAGGCTAACCTACGAGCTAGCCTGGTTTT
CATTTAGAAAGAGCTGAACACGTGCGAGTCATCAAGTTGAGTTTTGGAGG
CTGGGTCTGTCTACGTTGCTTTCAAGGGAGAGGGATACTTGCCGAATCGA
AAAAGCTACAGCGGCGCAAAAGCCTCATCATACGGACTTAACAACTGACA
TTCAAGTACACGAAACAAAGAGGGGAGAGGGAGTGCTGAACTCTTCTCGC
GGCGGAACTTGGAAGGCAACCACGCAGTTGGAGAGGTGGACAAGGTCCTC
CTGTTTGAAACTCCATCTGATAGTGCGTCAATATACAAGTATTTAGCATA
CCGTACATACTCCAGGGGGGAATAGATTGCCGCCCAGGGCAGGTGTGACA
AAAAATATCGTCTCGATGATATCGTCACGAACCGCGCGCGACCCCCAGTG
CGTGTTAAATACCCTCTGCTCTTTGTCCGTACGTGCGCGTGTGCCTGAAC
GCCACGTTAACATTGCCTTCCGCGAACAGGTGGAGGGGTGAGACCCGCAA
CCGATACCGTTTGTTTGATCGTATTTTGGGGGATCTTTTGTACAACAGCA
ATCTCAAGCTTCCAAGCCCTGATCTCTGTGCCATTTAGGTGGAGGCGACG
AAGCGCTGGTGGGGGAGCCCTCGGTTCCGGTACACCAAGCGCCCTTTCAG
CGCCGAGGAGGTGGTCTCCCTTCGCGGAACCCTCCCGGAGACATATCCCT
CAGATATACAGGTAGGTGAATGTAGTAAGCGTACGTTGTGGAGGTAGTAC
TGGATGTTTTGCGCAAGGCGTGCCAGTTTTTTGCATCGCTCAGGCTTGCG
TGTTGTATGGTTGAAGTTTCGCTTCGCTCTACTGGTGATTCAGCTGCATG
ATGACTACACCAGTCTTTTTGGTGCGGATCGACGAAATGAAAATGCAGGC
GCGAAAGCTGTGGGAACTGCTGGAGAAGAAGCATGCTCTCGGAGACTTTT
CTCATACGTTCGGGGCGCTGGACCCCGTCCAGGTGATCACGTTAATGATG
GAACAGTAGTGTGAGTGAAGAAATACTTGAGATATTTTTCGGGACAACTT
GAGATAGTTTTTGAGACTACGATTGGCCATTTTGTTATGTTTCGTGAGCA
ACGAGACAAAGGATCTCTATACGACAACTGCCATGATTGCCCACAACCAA
AATCAACGGCAGCCACAACATCTACCACGCAAATAATCGTATGCGGTGGT
GCGGCAGGGAATACTACTGGATCGAGGCGTAGCATGCTGACGCATAACGT
GGAGTATTCAACAAACTTCTCTGCGTGAAAGTTGCGCGGATGCACGCCAT
CTATGAAAAAATCAAAAAAACATATTGCGCTTGATCCCAACATCTCAACG
GCCAACAAACAAGCGCTTATTGTACTATCCTTGTTCACCCTTGCCTGTGC
TGTGTCTCCAATCCTGGCGGTCACCGTCTTAAGGTGATCGAGATGGCGCC
GCACCTCGAAACGGTGTACGTGAGCGGCTGGCAGTGCTCATCGACCGCAA
GCACCAGGTATGGACGCGGCGCAGGCGTATGGTCACCATGACTTTCTTTC
TTGATTGATTCACCGCTTGAACTGTTCTACACTGCTCGGCCGTACGACAT
GAAGAACAGAATTTAGCCGCGAACTCGTCTTGCATGTGACGTGCCCGCTT
TGTCCATGACGATCCAAAAACATCCACAGGCTCCCCGTGACAGAATTATC
CTTACACCGCCTCCCCTGCCGCGCCCCTTACGAAATTATTTTGCTGCGTC
AATTTTTCATCAGCTCGTTCCCGCTGCCGAGTATTGTCGTTGGGAGACTC
GACAACGTTTGGCCGATGTATCACACCGATTTCCTTGCCCTGCCTTTTCT
TCTTTTTTGCAAACTCCCTTCACCAGCAACGAGCCCGGTCCAGATTTCGC
CGACTACCCCTACGATACGGTGCCCAACAAAGTCGACCAGCTCTTCAGAG
CGCAGAGGCACCACGACAGGCGCCAGAATGACGTGAGTCACCATTCTTCG
GAGGCCTCGAGCGGGAGGGGTGAGGGTAATGTTCAAGGGGCCCTCGTTCC
CCCACCTCACTCGGCAGTGCTTCGAGTAGTGCAACTCTACTACTGCATCG
GCGGCATCGATAGAGCAAGTCGAAACTGCAGGCGTAACTACAATCGATTT
CTCGGGACCCTCAACGGTCCCCACGAAGTACATATCGCACTTTGGCGTCC
AAGGGTGACCGCATAGTCTAGAGCGGTGTAGGCCAATCTCGACACCCCGC
AACGGAGACGCGGAGCGTGCGGCCTGGCAGATAGACCTGTAGTGCTTTGT
GCGCTTTTCAGAGCGGTCAAACACGCTGGCGTAAGATGCCCATCCACCCA
TGGCTTTTGGGGTCATATTGATGGCTTTATCGCTGGTTCCTTTGTAGACT
GTGTGGACTTCGTCTTGTCTTCTACCATAGCCTAGCGACACCTGCCCGAT
CCCGAGATATTCGAAGACATGTGAGTGACGTCACCATCAATGTTGTCGCC
CTCATCACCCGAAAGGCCGTCTGTTTCTACCTACTCTCCCCGCTCTCGTA
ACAGCTTGATCGTGCCTTGTTTGCGGAGTGATGGTCACACATGTCGTGTA
CAAATTATAACGCCCCTGAGAATACACCCCCCGCCATCAGGAACGCTGCT
CCATGAGCGAGGGCGAGCGATTGTCTACCCCCGCCGTGGACTACCTCCGC
CCGATCATCGCGGACGGGGACACCGGGCACGGCGGTCTCACGGCGGTCAT
GAAGCTGACCAAGATGTTCATCGAGAAGGGTGCCGCCGGCATCCACTTCG
AGGATCAGAAGGTAAGTGCTGTGGGTTGAGCTTATGCTGGCGTGTGATTG
GGTCGGGAGGCGGTGGGAAACAAATGCGGATTGGGCGATTTGGAACGGGG
AAGGTAGTGGTTTGTGGCACACACGTGACGTGGAGGCGGTTTCGGCTGTA
CGTTGTCAGGGCGTTTTATTTTTATTCGGGTGTTGTGGCAAACTGTAGGA
TCTGCGGGCTCGGGGTCGCTTTTGTTGTACATCGGCAACTAACGTGTGTC
GTTCTGAAGTGTTGGTGGATTTGGTGGTGATTTTGGCAAGGGCAGTATCC
GCCATCAAGAGAGAAACCCCTCTTCCTGCGAGAGGAGTTATCCTGGGTAA
GGCTATGTATGTCAGCCGAGCGCGGCCTTGCAGATGGTGGGATATAGTTA
GGGGATCACAGGCTATATCGGTTCAGGATTTGTCACCACGTCGATACGTG
CTTGACTCGAACACCTCCTCTGCGCATGTCGACCGGCTGAGCACCCGGTC
GGTAGTGGTGAGAAGGCGCGTTCCGCCTCAACTTGCACTTGTGCTAATTT
CGGGTTCTGAGCACACACCAAAGCCTCAATGAATCTCTGTGACAAGATAC
CCAACAACTATGTAGCATAGCACGGCTGTCCCACCTTTTCGGTGCATCGG
GGCATGAATGTGATCGGAGTCTCTTTTCTTGTGCTCTCGCCTCGTTCGTT
TCTGTTTTTTCTGTTTGCGTTGCATCTGATTGGCTGCACCACTGTACCCC
ACGAACAGCCCGGGACGAAGAAGTGTGGGCACATGGGAGGCAAGGTGCTC
GTGTCCATGCAAGAGCACTGTGACCGCCTGGTGGCGGCTAGGCTTCAGGC
CGACATCATGGGCACCGAGGTG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig853:15833..20754+

>mRNA_Ecto-sp13_S_contig853.19931.1 ID=mRNA_Ecto-sp13_S_contig853.19931.1|Name=mRNA_Ecto-sp13_S_contig853.19931.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=765bp|location=Sequence derived from alignment at Ecto-sp13_S_contig853:15833..20754+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCCGCCAGCGTCGATGTACGGGCAGCAGCTCTTCGGGCATAACCTCAA
GTCGCACGGAGCGCAAGTCCATGCCAAAACGTTCAACCACGATGTGGAGG
CGACGAAGCGCTGGTGGGGGAGCCCTCGGTTCCGGTACACCAAGCGCCCT
TTCAGCGCCGAGGAGGTGGTCTCCCTTCGCGGAACCCTCCCGGAGACATA
TCCCTCAGATATACAGGCGCGAAAGCTGTGGGAACTGCTGGAGAAGAAGC
ATGCTCTCGGAGACTTTTCTCATACGTTCGGGGCGCTGGACCCCGTCCAG
GTGATCGAGATGGCGCCGCACCTCGAAACGGTGTACGTGAGCGGCTGGCA
GTGCTCATCGACCGCAAGCACCAGCAACGAGCCCGGTCCAGATTTCGCCG
ACTACCCCTACGATACGGTGCCCAACAAAGTCGACCAGCTCTTCAGAGCG
CAGAGGCACCACGACAGGCGCCAGAATGACGAACGCTGCTCCATGAGCGA
GGGCGAGCGATTGTCTACCCCCGCCGTGGACTACCTCCGCCCGATCATCG
CGGACGGGGACACCGGGCACGGCGGTCTCACGGCGGTCATGAAGCTGACC
AAGATGTTCATCGAGAAGGGTGCCGCCGGCATCCACTTCGAGGATCAGAA
GCCCGGGACGAAGAAGTGTGGGCACATGGGAGGCAAGGTGCTCGTGTCCA
TGCAAGAGCACTGTGACCGCCTGGTGGCGGCTAGGCTTCAGGCCGACATC
ATGGGCACCGAGGTG
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