mRNA_Ecto-sp13_S_contig8524.19925.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8524.19925.1 vs. uniprot
Match: D7FIQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIQ3_ECTSI) HSP 1 Score: 885 bits (2287), Expect = 4.310e-310 Identity = 442/466 (94.85%), Postives = 446/466 (95.71%), Query Frame = 1
Query: 1 QRVESRLKAGLLEVVVVGETMFANSIETLSEFDWLIAVFDEFHHYKNPYTNKNRAVQKLVNAEVFIGLTGTLVQNNLDEYWSLLNTVQPGCVGRQDDFKRHFTEPILRGRKRGASRADVLLGRERIDEMGATRDKVVLRRVKDILGELLKGKIGTVVFCNLTHVQKLVYKTVLSLPEFKLLANASDPCPCGRPDARSGSCCGMWPQDDTSEDLVDPFAVIWRRLHPDLEVCKKGPGCPYCCSFSAISKLQKLANHPSLLQVKPPYKYGDNVHKMLDDIAFADVAFSEEARAIMAGLPGQHGGGAASGSSIGARRGAGGRGGGDEWDRRLARPENFLQLCRDDTCGKMRTLKVLLERFKNKHKVLLFSYSTAMLDILQALCSSQGYTFLKLDGNTAKDQRQKMIDRFTKQNAIQNNVFLISTTAGGTGLNLQAASKVILYDVNWNPAQDAQAEDRAYRIGQLKEVEV 1398
QRVESRLKAGLLEVVVVGETMFANSIETLSEFDWL AVFDEFHHYKNPYTNKNRAVQKLVNAEVFIGLTGTLVQNNLDEYWSLLNTVQPGCVGRQDDFKRHFTEPILRGRKRGASRADVLLGRERIDEMG TRDKVVLRRVKDILG+LLKGKIGTVVFCNLTHVQKLVY+TVLSLPEFKLLANASDPCPCGRPDARSGSCCGMWPQDDTSEDLVDP AVIWRR HPDLEVCKKGPGCPYCCSFSAISKLQKLANHPSLLQVKPPYKYG+N HKMLDDIAFA+VAFSEEAR IMA LPGQHGGGA SGSSIG EWDRRLARPENFLQLCRDDTCGKMRTLKVLLERFKNKHKVLLFSYSTAMLDILQALCSSQGYTFLKLDGNTAKDQRQKMIDRFTKQNAIQNNVFLISTTAGGTGLNLQAASKVILYDVNWNPAQDAQAEDRAYRIGQLKEVEV
Sbjct: 400 QRVESRLKAGLLEVVVVGETMFANSIETLSEFDWLTAVFDEFHHYKNPYTNKNRAVQKLVNAEVFIGLTGTLVQNNLDEYWSLLNTVQPGCVGRQDDFKRHFTEPILRGRKRGASRADVLLGRERIDEMGVTRDKVVLRRVKDILGDLLKGKIGTVVFCNLTHVQKLVYRTVLSLPEFKLLANASDPCPCGRPDARSGSCCGMWPQDDTSEDLVDPRAVIWRRFHPDLEVCKKGPGCPYCCSFSAISKLQKLANHPSLLQVKPPYKYGENAHKMLDDIAFANVAFSEEARVIMADLPGQHGGGAVSGSSIGXXXXXXXXXXXXEWDRRLARPENFLQLCRDDTCGKMRTLKVLLERFKNKHKVLLFSYSTAMLDILQALCSSQGYTFLKLDGNTAKDQRQKMIDRFTKQNAIQNNVFLISTTAGGTGLNLQAASKVILYDVNWNPAQDAQAEDRAYRIGQLKEVEV 865
BLAST of mRNA_Ecto-sp13_S_contig8524.19925.1 vs. uniprot
Match: A0A6H5JA09_9PHAE (Helicase C-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA09_9PHAE) HSP 1 Score: 533 bits (1373), Expect = 4.050e-180 Identity = 269/298 (90.27%), Postives = 273/298 (91.61%), Query Frame = 1
Query: 547 NASDPCPCGRPDARSGSCCGMWPQDDTSEDLVDPFAVIWRRLHPDLEVCKK--------------GPGCPYCCSFSAISKLQKLANHPSLLQVKPPYKYGDNVHKMLDDIAFADVAFSEEARAIMAGLPGQHGGGAASGSSIGARRGAGGRGGGDEWDRRLARPENFLQLCRDDTCGKMRTLKVLLERFKNKHKVLLFSYSTAMLDILQALCSSQGYTFLKLDGNTAKDQRQKMIDRFTKQNAIQNNVFLISTTAGGTGLNLQAASKVILYDVNWNPAQDAQAEDRAYRIGQLKEVEV 1398
+ASDPCPCGRPDARSGSCCGMWPQDDTSEDLVDP AVIWRR HPDLEVCKK GPGCPYCCSFSAISKLQKLANHPSLLQVKPPYKYGDN HKMLDDIAFA+VAF EEARAIMAGLPGQHGGG ASGSSIGA RGAGGRGGGDEWDRRLARPENFLQLCRDDTCGKMRTLKVLLERFKNK KVLLFSYSTAMLDILQALCSSQGYTFLKLDGNTAKDQRQKMIDRFTKQNAIQ+NVFL+STTAGGTGLNLQAASKVILYDVNW DAQAEDRAYRIGQLKEVEV
Sbjct: 4 SASDPCPCGRPDARSGSCCGMWPQDDTSEDLVDPRAVIWRRFHPDLEVCKKVWRPAFLVLAPGSVGPGCPYCCSFSAISKLQKLANHPSLLQVKPPYKYGDNAHKMLDDIAFANVAFDEEARAIMAGLPGQHGGGVASGSSIGAGRGAGGRGGGDEWDRRLARPENFLQLCRDDTCGKMRTLKVLLERFKNKQKVLLFSYSTAMLDILQALCSSQGYTFLKLDGNTAKDQRQKMIDRFTKQNAIQSNVFLVSTTAGGTGLNLQAASKVILYDVNW----DAQAEDRAYRIGQLKEVEV 297
BLAST of mRNA_Ecto-sp13_S_contig8524.19925.1 vs. uniprot
Match: D7FX84_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX84_ECTSI) HSP 1 Score: 348 bits (893), Expect = 1.480e-104 Identity = 205/464 (44.18%), Postives = 274/464 (59.05%), Query Frame = 1
Query: 19 LKAGLLEVVVVGETMFANSIETLSEFDWLIAVFDEFHHYKNPYTNKNRAVQKLVNAEVFIGLTGTLVQNNLDEYWSLLNTVQPGCVGRQDDFKRHFTEPILRGRKRGASRADVLLGRERIDEMGATRDKVVLRRVKDI-LGELLKGKIGTVVFCNLTHVQKLVYKTVLSLPEFKLLANASDPCPCGRPDARSGS-CCGMWPQD-DTSEDLVDPFAVIWRRLHPDLEVCKKGPGCPYCCSFSAISKLQKLANHPSLLQVKPPYKYGDNVHKMLDDIAFADVAFSEEARAIMAGLPGQHGGGAASGSSIGARRGAGGRGGGDEWDRRLARPENFLQLCRDDTCGKMRTLKVLLERF-KNKHKVLLFSYSTAMLDILQALCSSQGYTFLKLDGNTAKDQRQKMIDRFTKQNAIQNNVFLISTTAGGTGLNLQAASKVILYDVNWNPAQDAQAEDRAYRIGQLKEVEV 1398
LKAG EVV + ++ L + + +FDE+H K+ T ++A +L VF GLTGTL+QN++ E W LL+ + P VG Q F HF+EPI R R A+ +D LG +R+ E+ RDK ++RR KD LG++LKGK TVVFC+L+ VQ+ +Y+ VLSLPEF+LLA A +PC CGR + + CC P D VDP AV++RRLHP L C K CP+CC A+SKLQK+ANHP LLQ D HK FA+VAF++ AR IM GL R + FL + + CGKM++L+ LL +F + + KVL+FS+STAMLD+L++ ++GY + +LDG T+ +RQ I+ F A VFLIST AGG GLNL AS+V+LYDVNWNPA QA+DRAYRIGQ ++V V
Sbjct: 575 LKAGRYEVVATSYDLLRACVDRLKKQRFDAVIFDEYHTIKSATTMVSQAACELRTKRVF-GLTGTLIQNDMKELWFLLHLIDPLAVGEQSRFTEHFSEPIKRARAMNATASDRRLGEKRLKELDGIRDKNMIRRTKDEELGDVLKGKSDTVVFCDLSEVQRELYQRVLSLPEFQLLARAKEPCNCGRSGRPTRARCCHKTPDSRGGGGDGVDPRAVLFRRLHPTLMECDK---CPFCCQLPAVSKLQKIANHPCLLQEN----IRDPEHKRQQQRQFAEVAFTDRAREIMGGLE---------------------------------RSQKFLDVSKVGVCGKMKSLETLLAKFHETRDKVLVFSWSTAMLDVLESFVGAKGYVYRRLDGTTSSKERQARINEFNSDRA-GVFVFLISTRAGGQGLNLHTASRVVLYDVNWNPALGLQAQDRAYRIGQKRKVAV 996
BLAST of mRNA_Ecto-sp13_S_contig8524.19925.1 vs. uniprot
Match: A0A7S2W4G0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W4G0_9STRA) HSP 1 Score: 282 bits (721), Expect = 1.050e-83 Identity = 175/491 (35.64%), Postives = 257/491 (52.34%), Query Frame = 1
Query: 28 GLLEVVVVGETMFANSIETLSEFDWLIAVFDEFHHYKNPYTNKNRAVQKLVN-AEVFIGLTGTLVQNNLDEYWSLLNTVQPGCVGRQDDFKRHFTEPILRGRKRGASRADVLLGRERIDEMGATRDKVVLRRVKDI-LGELLKGKIGTVVFCNLTHVQKLVYKTVLSLPEFKLLANASDPCPCGRPDARSGSCCGMWPQDDTSEDL-------------------------VDPFAVIWRRL--HPDLEVCKKGPGCPYCCSFSAISKLQKLANHPSLLQV--KPPYKYGDNVHKMLDDIAFADVAFSEEARAIMAGLPGQHGGGAASGSSIGARRGAGGRGGGDEWDRRLARPENFLQLCRDDTCGKMRTLKVLLERF---KNKHKVLLFSYSTAMLDILQALCSSQGYTFLKLDGNTAKDQRQKMIDRFTKQNAIQNNVFLISTTAGGTGLNLQAASKVILYDVNWNPAQDAQAEDRAYRIGQLKEVEV 1398
GL+EVV+VG ++ L+ DW + V DE H +K P + A+ +LV A + +GLTGT + N+L E ++L+N + PGC+G D F+ + PI R R A+ + G ER + + + LRR K + L ++L K VVFC+L+ +Q +Y+ +L LP+F + + +PC CGR A G CC P + E +DP AVIWR++ H + +C++ CP C F I+KLQK+ANHP+LLQV + P D V AFA+VAF+ E + G R EN L + + CGK+R L+ +L F + K ++FS+S LDI+Q LC ++G+ +L+ DG+T + +RQ +ID F N +FL ST AGG G+NLQ+A KV+++D NWNPA D QA+DR YRIGQ K+V+V
Sbjct: 107 GLVEVVLVGHSLLDRLNPHLTRVDWSVLVIDECHAFKEPSAKRTMALMRLVPCARMRLGLTGTPMSNHLMELFNLMNLLAPGCLGSHDAFQHTYMRPIKRARAANANEETIARGTERHERLAKVKAPYFLRRSKKVELKDMLPIKEQLVVFCHLSPLQVQLYRRLLQLPDFAAVRLSGEPCDCGRQGAIRGECCYTAPFHGSGEQQGQAVHSVANGSHRSLTSVFADSAFEIDPRAVIWRQMPSHSEGSLCER---CPNCLIFPCIAKLQKVANHPALLQVNSRDPKAKRDAVK------AFAEVAFTPELLEPLGGT--------------------------------YTRAENVLMTSQTEVCGKLRVLEDILTAFWAARPVEKCVVFSWSVQTLDIIQDLCITRGWPYLRFDGSTPQGRRQGLIDEFNDLTK-SNFIFLCSTRAGGVGINLQSARKVVIFDANWNPAYDQQAQDRCYRIGQRKDVQV 555
BLAST of mRNA_Ecto-sp13_S_contig8524.19925.1 vs. uniprot
Match: UPI001FB1427E (switch 2 n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB1427E) HSP 1 Score: 262 bits (669), Expect = 4.340e-75 Identity = 167/463 (36.07%), Postives = 241/463 (52.05%), Query Frame = 1
Query: 19 LKAGLLEVVVVGETMFANSIETLSEFDWLIAVFDEFHHYKNPYTNKNRAVQKLVNAEVFIGLTGTLVQNNLDEYWSLLNTVQPGCVGRQDDFKRHFTEPILRGRKRGASRADVLLGRERIDEMGATRDKVVLRRVKD-ILGELLKGKIGTVVFCNLTHVQKLVYKTVLSLPEFKLLANASDPCPCGRPDARSGSCCGMWPQDDTSEDLVDPFAVIWRRLHPDL-EVCKKGPGCPYCCSFSAISKLQKLANHPSLLQVKPPYKYGDNVHKMLDDIAFADVAFSEEARAIMAGLPGQHGGGAASGSSIGARRGAGGRGGGDEWDRRLARPENFLQLCRDDTCGKMRTLKVLLERFKNK-HKVLLFSYSTAMLDILQALCSSQGYTFLKLDGNTAKDQRQKMIDRFTKQNAIQNNVFLISTTAGGTGLNLQAASKVILYDVNWNPAQDAQAEDRAYRIGQLKEVEV 1398
L+AG ++V++ F LS W I + DE H KN + +A ++ + + GLTGT++QN + E ++L++ V PGC+G ++ F+ ++ EP+ G++ A V ER + + K VLRR K+ +G L+ GK VVFC ++ VQK VY+ +L LPE + L N PC CG P G CC + P VIWR LH D + C CP C + KLQ+++NH L++ P D+ K D FA + F + +M G A+ E+F+ L CGKMR L+ L+ + +K KVLLFSYS MLDIL+ L +GY F +LDG+T RQ ++D F + Q VFLIST AGG GLNL +A++V+++D NWNPAQD QA+DR++R GQ + V V
Sbjct: 254 LRAGGVDVLITSFDTFRIHGTILSCIQWEIVIIDEAHRLKNEKSKLYQACLQVKTTKRY-GLTGTMMQNKITELFNLMDWVVPGCLGTREHFREYYDEPLKHGQRSTAPETFVRKADERKRHLASVLHKYVLRRTKEETIGHLMLGKEDNVVFCAMSEVQKRVYRRMLQLPEIQCLINKDKPCSCGSP-LTQGQCCRR----------IVPDGVIWRYLHKDSSDGCDS---CPSCLVLPCLVKLQQISNHLELIKPNPR----DDPDKQKKDEEFASIVFGSDME-LMEGF---------------------------------AQNESFMGLSDAKNCGKMRVLENLMVSWMSKGDKVLLFSYSVRMLDILEKLLIRKGYCFSRLDGSTPTGSRQSLVDDFNSSPSKQ--VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVMV 661
BLAST of mRNA_Ecto-sp13_S_contig8524.19925.1 vs. uniprot
Match: A0A836DFT0_9ROSI (Switch n=1 Tax=Salix suchowensis TaxID=1278906 RepID=A0A836DFT0_9ROSI) HSP 1 Score: 258 bits (658), Expect = 3.710e-74 Identity = 162/464 (34.91%), Postives = 245/464 (52.80%), Query Frame = 1
Query: 16 RLKAGLLEVVVVGETMFANSIETLSEFDWLIAVFDEFHHYKNPYTNKNRAVQKLVNAEVFIGLTGTLVQNNLDEYWSLLNTVQPGCVGRQDDFKRHFTEPILRGRKRGASRADVLLGRERIDEMGATRDKVVLRRVKD-ILGELLKGKIGTVVFCNLTHVQKLVYKTVLSLPEFKLLANASDPCPCGRPDARSGSCCGMWPQDDTSEDLVDPFAVIWRRLHPDL-EVCKKGPGCPYCCSFSAISKLQKLANHPSLLQVKPPYKYGDNVHKMLDDIAFADVAFSEEARAIMAGLPGQHGGGAASGSSIGARRGAGGRGGGDEWDRRLARPENFLQLCRDDTCGKMRTLKVLLERFKNK-HKVLLFSYSTAMLDILQALCSSQGYTFLKLDGNTAKDQRQKMIDRFTKQNAIQNNVFLISTTAGGTGLNLQAASKVILYDVNWNPAQDAQAEDRAYRIGQLKEVEV 1398
+LKAG +E+++ + LSE DW + + DE H KN + A + + IGLTGT++QN + E ++LL+ V PG +G ++ F+ + EP+ G++ A + V +R + + A K +LRR K+ +G L+ GK VVFC+++ +QK VY+++L LP+ + L N PC CG P + CC + P +IW LH D E C CPYC + KLQ+++NH L++ P D + K D FA F + + GG+ A+ ENF+ L CGKM+ L+ L+ + ++ K+LLFSYS MLDIL+ +GY+F +LDG+T + RQ ++D F + Q VFLIST AGG GLNL +A++V+++D NWNPAQD QA+DR++R GQ + V V
Sbjct: 256 KLKAGGVEILITSFDTYRIHGSILSELDWEVVIVDEAHRLKNEKSKLYLACSE-IKTRKRIGLTGTVMQNKIMELFNLLDWVAPGSLGSREHFREFYDEPLKHGQRSTAPESFVRKADKRKEHLVAVLRKYMLRRTKEETIGHLMMGKEDNVVFCSMSELQKRVYRSMLQLPDIQCLVNKDLPCSCGSP-LKQVECCKR----------IVPDGIIWPYLHRDSPEGCDS---CPYCLVLPCLVKLQQISNHLELIKPNPR----DELDKQKKDAEFASAVFGPDVDLV----------------------------GGN------AQSENFMGLSDVKHCGKMQALEKLMFSWASRGDKILLFSYSVRMLDILEKFLIRKGYSFSRLDGSTPSNLRQSLVDDFNSSPSKQ--VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRYGQKRHVVV 664
BLAST of mRNA_Ecto-sp13_S_contig8524.19925.1 vs. uniprot
Match: S8CF35_9LAMI (Uncharacterized protein (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8CF35_9LAMI) HSP 1 Score: 254 bits (650), Expect = 1.150e-73 Identity = 166/465 (35.70%), Postives = 236/465 (50.75%), Query Frame = 1
Query: 16 RLKAGLLEVVVVGETMFANSIETLSEFDWLIAVFDEFHHYKNPYTNKNRAVQKLVNAEVFIGLTGTLVQNNLDEYWSLLNTVQPGCVGRQDDFKRHFTEPILRGRKRGASRADVLLGRERIDEMGATRDKVVLRRVKD-ILGELLKGKIGTVVFCNLTHVQKLVYKTVLSLPEFKLLANASDPCPCGRPDARSGSCCGMWPQDDTSEDLVDPFAVIWRRLHPDL--EVCKKGPGCPYCCSFSAISKLQKLANHPSLLQVKPPYKYGDNVHKMLDDIAFADVAFSEEARAIMAGLPGQHGGGAASGSSIGARRGAGGRGGGDEWDRRLARPENFLQLCRDDTCGKMRTLKVLLERF-KNKHKVLLFSYSTAMLDILQALCSSQGYTFLKLDGNTAKDQRQKMIDRFTKQNAIQNNVFLISTTAGGTGLNLQAASKVILYDVNWNPAQDAQAEDRAYRIGQLKEVEV 1398
R+K+ LEV++ + LS+ W + V DE H KN + K+ + + GLTGT++QN + E ++L + V PG +G +D F+ + EP+ G++ A + V + ER + + +K +LRR KD +G L+ GK VVFC+++ +QK VY+ L LPE + L N PC CG P + CC P VIW LH D E C CP+C + KLQ+++NH L+ P D+ K D FA S P AA +G F+ L + CGKMRTL+ LL + N K LLFSYS MLDIL+ +GY+FL+LDG+T RQ+++D F + + Q VFLIST AGG GLNL AA++V+++D NWNPA D QA+DR++R GQ + V V
Sbjct: 229 RMKSHALEVLITSFDTYRMQGSLLSDILWEVVVIDEAHKLKNDKSKLYIECSKIKTPKRY-GLTGTIMQNKIMELYNLFDFVVPGSLGARDHFREFYDEPLKFGQRSTAPQQSVEVAEERKRHLASVLEKYMLRRTKDETIGRLMMGKEDNVVFCSMSDMQKRVYERALQLPEIECLVNKDRPCSCGSP-LKQSECCTR----------TVPNGVIWSHLHRDSPEEGCDS---CPFCVVLPCLVKLQQISNHLELINPNP----NDDPDKQTRDKEFASAVSSSS-------FP------AAQDDGLG-----------------------FMALSDAEHCGKMRTLERLLRSWISNGDKTLLFSYSVRMLDILEKFVIRKGYSFLRLDGSTPAALRQRLVDDFNRSPSKQ--VFLISTRAGGLGLNLTAANRVVIFDPNWNPAHDLQAQDRSFRYGQTRRVTV 636
BLAST of mRNA_Ecto-sp13_S_contig8524.19925.1 vs. uniprot
Match: D8TCS2_SELML (Uncharacterized protein (Fragment) n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8TCS2_SELML) HSP 1 Score: 254 bits (648), Expect = 3.980e-73 Identity = 165/469 (35.18%), Postives = 247/469 (52.67%), Query Frame = 1
Query: 1 QRVESRLKAGLLEVVVVGETMFANSIETLSEFDWLIAVFDEFHHYKNPYTNKNRAVQKLVNAEVFIGLTGTLVQNNLDEYWSLLNTVQPGCVGRQDDFKRHFTEPILRGRKRGASRADVLLGRERIDEMGATRDKVVLRRVKD-ILGELLKGKIGTVVFCNLTHVQKLVYKTVLSLPEFKLLANASDPCPCGRPDARSGSCCGMWPQDDTSEDLVDPFAVIWRRLHP-DLEVCKKGPGCPYCCSFSAISKLQKLANHPSLLQVKPPYKYGDNVHKMLDDIAFADVAFSEEARAIMAGLPGQHGGGAASGSSIGARRGAGGRGGGDEWDRRLARPENFLQLCRDDTCGKMRTLKVLLERFKNK-HKVLLFSYSTAMLDILQALCSSQGYTFLKLDGNTAKDQRQKMIDRFTKQNAIQNNVFLISTTAGGTGLNLQAASKVILYDVNWNPAQDAQAEDRAYRIGQLKEVEV 1398
+ + +++ L+VV+ F +L E DW + DE H KN + +A +L + GLTGT++QN L + +++ PGC+G ++ F+ ++ EPI +G+K AS+ V L +R + A + LRR KD +G LLKGK V+FC ++ +Q+ VYK +L P+F+ L ++PC CG + S CC P IW LH + + C+ CP C ++KLQ+++NH LL KP D++ K D AFA + F ++A ++ GG + D E+FL L CGKM LK LL ++ ++ KVLLFSYS ML IL+ +GY F +LDG+T + RQ ++D F + Q VFLIST AGG GLNL +A++V+++D NWNPAQD QA+DR++R GQ + V V
Sbjct: 128 EAIVDKVRRDELDVVITSHDTFRIHGSSLQEIDWDCVIVDEAHRLKNEKSQLYKACCRL-RTKCRFGLTGTILQNKLIDLFNVFEWAAPGCLGTREHFRGYYDEPIKQGQKISASQVLVELAEKRRQHLLAVLRRYSLRRTKDETIGHLLKGKEDIVIFCAMSPIQRRVYKRLLESPDFQCLVRKNEPCGCGSEEP-SSKCCLR----------TAPKGPIWSYLHKGNPDGCES---CPCCLVLPCLNKLQQVSNHLELL--KP--NLSDDIEKRRKDAAFASLVFGDDAPSL----------------------------GGIQPD------ESFLGLSDSQNCGKMLALKNLLSKWTSQGDKVLLFSYSVRMLGILEKFLIRRGYCFCRLDGSTPMNARQGIVDEFNTSPSKQV-VFLISTRAGGLGLNLVSANRVVVFDPNWNPAQDLQAQDRSFRFGQKRHVTV 542
BLAST of mRNA_Ecto-sp13_S_contig8524.19925.1 vs. uniprot
Match: A0A2K1X1Q5_POPTR (Uncharacterized protein n=2 Tax=Populus trichocarpa TaxID=3694 RepID=A0A2K1X1Q5_POPTR) HSP 1 Score: 252 bits (643), Expect = 1.460e-72 Identity = 160/464 (34.48%), Postives = 244/464 (52.59%), Query Frame = 1
Query: 16 RLKAGLLEVVVVGETMFANSIETLSEFDWLIAVFDEFHHYKNPYTNKNRAVQKLVNAEVFIGLTGTLVQNNLDEYWSLLNTVQPGCVGRQDDFKRHFTEPILRGRKRGASRADVLLGRERIDEMGATRDKVVLRRVKD-ILGELLKGKIGTVVFCNLTHVQKLVYKTVLSLPEFKLLANASDPCPCGRPDARSGSCCGMWPQDDTSEDLVDPFAVIWRRLHPDL-EVCKKGPGCPYCCSFSAISKLQKLANHPSLLQVKPPYKYGDNVHKMLDDIAFADVAFSEEARAIMAGLPGQHGGGAASGSSIGARRGAGGRGGGDEWDRRLARPENFLQLCRDDTCGKMRTLKVLLERFKNK-HKVLLFSYSTAMLDILQALCSSQGYTFLKLDGNTAKDQRQKMIDRFTKQNAIQNNVFLISTTAGGTGLNLQAASKVILYDVNWNPAQDAQAEDRAYRIGQLKEVEV 1398
+LKAG +E+++ + LSE DW + + DE H KN + A + + IGLTGT++QN + E ++LL+ V PG +G ++ F+ + EP+ G++ A + V +R + + + K +LRR K+ +G L+ GK VVFC+++ +QK VY+++L LP+ + L N PC CG P + CC + P +IW LH D E C CPYC + KLQ+++NH L++ P D K D FA F + + GG+ A+ ENF+ L CGKM+ L+ L+ + ++ K+LLFSYS MLDIL+ +G++F +LDG+T + RQ ++D F + Q VFLIST AGG GLNL +A++V+++D NWNPAQD QA+DR++R GQ + V V
Sbjct: 260 KLKAGGVEILITSFDTYRIHGSILSEVDWEVVIVDEAHRLKNEKSKLYLACLE-IKTRKRIGLTGTVMQNKIMELFNLLDWVAPGSLGSREHFREFYDEPLKHGQRSTAPESFVRKADKRKEHLVSVLRKYMLRRTKEETIGHLMMGKEDNVVFCSMSELQKRVYRSMLQLPDIQCLVNKDLPCSCGSP-LKQVECCKR----------IVPDGIIWPYLHRDNPEGCDS---CPYCLVLPCLVKLQQISNHLELIKPNPR----DEPDKQKKDAEFASAVFGADVDLV----------------------------GGN------AQSENFMGLSDVKHCGKMQALEKLMFSWASRGDKILLFSYSVRMLDILEKFLIRKGHSFSRLDGSTPTNLRQSLVDDFNSSPSKQ--VFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVVV 668
BLAST of mRNA_Ecto-sp13_S_contig8524.19925.1 vs. uniprot
Match: D8RP48_SELML (Uncharacterized protein n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RP48_SELML) HSP 1 Score: 255 bits (651), Expect = 2.850e-72 Identity = 165/469 (35.18%), Postives = 247/469 (52.67%), Query Frame = 1
Query: 1 QRVESRLKAGLLEVVVVGETMFANSIETLSEFDWLIAVFDEFHHYKNPYTNKNRAVQKLVNAEVFIGLTGTLVQNNLDEYWSLLNTVQPGCVGRQDDFKRHFTEPILRGRKRGASRADVLLGRERIDEMGATRDKVVLRRVKD-ILGELLKGKIGTVVFCNLTHVQKLVYKTVLSLPEFKLLANASDPCPCGRPDARSGSCCGMWPQDDTSEDLVDPFAVIWRRLHP-DLEVCKKGPGCPYCCSFSAISKLQKLANHPSLLQVKPPYKYGDNVHKMLDDIAFADVAFSEEARAIMAGLPGQHGGGAASGSSIGARRGAGGRGGGDEWDRRLARPENFLQLCRDDTCGKMRTLKVLLERFKNK-HKVLLFSYSTAMLDILQALCSSQGYTFLKLDGNTAKDQRQKMIDRFTKQNAIQNNVFLISTTAGGTGLNLQAASKVILYDVNWNPAQDAQAEDRAYRIGQLKEVEV 1398
+ + +++ L+VV+ F +L E DW + DE H KN + +A +L + GLTGT++QN L + +++ PGC+G ++ F+ ++ EPI +G+K AS+ V L +R + A + LRR KD +G LLKGK V+FC ++ +Q+ VYK +L P+F+ L ++PC CG + S CC P IW LH + + C+ CP C ++KLQ+++NH LL KP D++ K D AFA + F ++A ++ GG + D E+FL L CGKM LK LL ++ ++ KVLLFSYS ML IL+ +GY F +LDG+T + RQ ++D F + Q VFLIST AGG GLNL +A++V+++D NWNPAQD QA+DR++R GQ + V V
Sbjct: 221 EAIVDKVRRDELDVVITSHDTFRIHGSSLQEIDWDCVIVDEAHRLKNEKSQLYKACCRL-RTKCRFGLTGTILQNKLIDLFNVFEWAAPGCLGTREHFRGYYDEPIKQGQKISASQVLVELAEKRRQHLLAVLRRYSLRRTKDETIGHLLKGKEDIVIFCAMSPIQRRVYKRLLESPDFQCLVRKNEPCGCGSEEP-SSKCCLR----------TAPKGPIWSYLHKGNPDGCES---CPCCLVLPCLNKLQQVSNHLELL--KP--NLSDDIEKRTKDAAFASLVFGDDAPSL----------------------------GGIQPD------ESFLGLSDSQNCGKMLALKNLLSKWTSQGDKVLLFSYSVRMLGILEKFLIRRGYCFCRLDGSTPMNARQGIVDEFNTSPSKQ--VFLISTRAGGLGLNLVSANRVVVFDPNWNPAQDLQAQDRSFRFGQKRHVTV 634 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8524.19925.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8524.19925.1 >prot_Ecto-sp13_S_contig8524.19925.1 ID=prot_Ecto-sp13_S_contig8524.19925.1|Name=mRNA_Ecto-sp13_S_contig8524.19925.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=466bp QRVESRLKAGLLEVVVVGETMFANSIETLSEFDWLIAVFDEFHHYKNPYTback to top mRNA from alignment at Ecto-sp13_S_contig8524:467..6408+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8524.19925.1 ID=mRNA_Ecto-sp13_S_contig8524.19925.1|Name=mRNA_Ecto-sp13_S_contig8524.19925.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5942bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8524:467..6408+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8524:467..6408+ >mRNA_Ecto-sp13_S_contig8524.19925.1 ID=mRNA_Ecto-sp13_S_contig8524.19925.1|Name=mRNA_Ecto-sp13_S_contig8524.19925.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1398bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8524:467..6408+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |