prot_Ecto-sp13_S_contig8512.19912.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8512.19912.1
Unique Nameprot_Ecto-sp13_S_contig8512.19912.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length345
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8512.19912.1 vs. uniprot
Match: D8LK79_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK79_ECTSI)

HSP 1 Score: 517 bits (1332), Expect = 6.650e-178
Identity = 307/340 (90.29%), Postives = 312/340 (91.76%), Query Frame = 0 
Query:    6 VGLIEQIWTNRLLKELDGIDSRLPAGISLSSHDMEPESGVCKAFFEAALKATASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSEAGDGDPADSASPPTPAEGKIDGEHQSAAAAADEDGSEGERGGSAESAAAEATPELLRFKIEMDLGLDTRYPFECPVIRVLEGDDVIPTSILSGDGLLSLPGSDAWTPSSTIVNTLQDIADMVLHAKEAGLPTGQGGDDAGALERGELRPGALVGTEALSGCLFPCTPPAAPLFSGSVLAPGSRRPLDRFVGVTDRQLLELEAHRTRMNKVRMVLAIPLSSLKKLKFRRGASVTVILKTDEAKEFLTPQ 345
            VGLIEQIWTNRLLKELDGIDSRLPAGISLSSHDMEPESGVCKAFFEAALKA   XXXXXXXXXXXXXXXXXXXXXXX            KSEAGD DPADSASPPTPAEGKIDGEH   AA  DEDGSEGE    AESAAAEA PELLRFKIEMDLGLDTRYPFECPVIRVLEGDDV+PTSILSGDGLLSLPGSDAWTPSSTIVNTLQDIADMVLHAKEAGLPTGQGGDDAGALERGELRPGALVGTEALSGCLFPC+PPAAPLFSGSVLAPGSRRPLDR+VGVTDRQLLELEAHRTRMNK  +VLAIPLS+LKKLKFRRGASVTVILKTDEAKEFLTPQ
Sbjct:    6 VGLIEQIWTNRLLKELDGIDSRLPAGISLSSHDMEPESGVCKAFFEAALKAXXXXXXXXXXXXXXXXXXXXXXXXXXKVDGSGK-----KSEAGDSDPADSASPPTPAEGKIDGEHPPPAA--DEDGSEGEGXXXAESAAAEAAPELLRFKIEMDLGLDTRYPFECPVIRVLEGDDVMPTSILSGDGLLSLPGSDAWTPSSTIVNTLQDIADMVLHAKEAGLPTGQGGDDAGALERGELRPGALVGTEALSGCLFPCSPPAAPLFSGSVLAPGSRRPLDRYVGVTDRQLLELEAHRTRMNKTVVVLAIPLSNLKKLKFRRGASVTVILKTDEAKEFLTPQ 338
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BLAST of mRNA_Ecto-sp13_S_contig8512.19912.1 vs. uniprot
Match: A0A6H5KXF8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXF8_9PHAE)

HSP 1 Score: 473 bits (1216), Expect = 1.200e-159
Identity = 301/362 (83.15%), Postives = 309/362 (85.36%), Query Frame = 0 
Query:   11 QIWTNRLLKELDGIDSRLPAGISLSSHDMEPESGVCKAFFEAALKATASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKS-------------------------EAGDGDPADSASPPTPAEGKIDGEHQSAAAAAD--EDGSEGERGGSAESAAAEATPELLRFKIEMDLGLDTRYPFECPVIRVLEGDDVIPTSILSGDGLLSLPGSDAWTPSSTIVNTLQDIADMVLHAKEAGLPTGQGGDDAGALERGELRPGALVGTEALSGCLFPCTPPAAPLFSGSVLAPGSRRPLDRFVGVTDRQLLELEAHRTRMNKVRMVLAIPLSSLKKLKFRRGASVTVILKTDEAKEFLTPQ 345
            QIWTNRLLKELDGIDSRLPAGISLSSHDMEPESGVCKAFFEAALKATASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                             GD  PADSASPPTP+EG +D EHQ         E+GSEGER      AAAEA PELLRFKIEMDLGL+TRYPFECPVIRVLEGDDV+PTSILSGDGLLSLPGSDAWTPSSTIVNTLQDIADMVLHA+EAGLPTGQGGDDAGALERGELRPGALVGTEALSGCLFPCTPP APLFSGSVLAPGSRRPLDR+VGVTDRQLLELEAHRTRMNK  +VLAIPLSSLKKLKFRRGASVT ILKTDEAKEFLTPQ
Sbjct:    5 QIWTNRLLKELDGIDSRLPAGISLSSHDMEPESGVCKAFFEAALKATASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCRGEEXXXXXXXXXXXXXXXXXXXXXXGDSGPADSASPPTPSEGTVDEEHQXXXXXXXXXEEGSEGERXXXXXXAAAEAAPELLRFKIEMDLGLETRYPFECPVIRVLEGDDVMPTSILSGDGLLSLPGSDAWTPSSTIVNTLQDIADMVLHAEEAGLPTGQGGDDAGALERGELRPGALVGTEALSGCLFPCTPPVAPLFSGSVLAPGSRRPLDRYVGVTDRQLLELEAHRTRMNKTVVVLAIPLSSLKKLKFRRGASVTAILKTDEAKEFLTPQ 366
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8512.19912.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LK79_ECTSI6.650e-17890.29Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KXF8_9PHAE1.200e-15983.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 65..87
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 159..220

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8512contigEcto-sp13_S_contig8512:1194..6390 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8512.19912.1mRNA_Ecto-sp13_S_contig8512.19912.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8512 1194..6390 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8512.19912.1 ID=prot_Ecto-sp13_S_contig8512.19912.1|Name=mRNA_Ecto-sp13_S_contig8512.19912.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=345bp
MLFVDVGLIEQIWTNRLLKELDGIDSRLPAGISLSSHDMEPESGVCKAFF
EAALKATASGGGGGKEEEEEEEEGSRGEKQEEEEEEEKGDGGGKKSEAGD
GDPADSASPPTPAEGKIDGEHQSAAAAADEDGSEGERGGSAESAAAEATP
ELLRFKIEMDLGLDTRYPFECPVIRVLEGDDVIPTSILSGDGLLSLPGSD
AWTPSSTIVNTLQDIADMVLHAKEAGLPTGQGGDDAGALERGELRPGALV
GTEALSGCLFPCTPPAAPLFSGSVLAPGSRRPLDRFVGVTDRQLLELEAH
RTRMNKVRMVLAIPLSSLKKLKFRRGASVTVILKTDEAKEFLTPQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016135UBQ-conjugating_enzyme/RWD