mRNA_Ecto-sp13_S_contig8511.19911.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8511.19911.1 vs. uniprot
Match: D7FLK7_ECTSI (D-3-phosphoglycerate dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLK7_ECTSI) HSP 1 Score: 598 bits (1541), Expect = 2.970e-204 Identity = 309/344 (89.83%), Postives = 320/344 (93.02%), Query Frame = 1
Query: 214 RRAQVKAYGVRISRGED-GSTPGAAAGTGEGASIKVTLHGKSLGVPEMAGPMSAAVIKGALNLLLAQEVNYVNAAAVAKDTGLAIEVAFSERDPKGYLNGLSVEFEIDGVLNGRRTMTGTCFGTDTRVVDVDGLEIDFNPSGHMLMFNNPDSPGMLRAVAAILGDQGINIASFALGRVRTGGVAMSCLNLDTPCTEGMLEEIRKIPDIRNVVQASIDSREDPSFRMDTDEASQGHVYGTPMPPDKPQHPEFSSGPCKKRPGWSASKLKSESLGRSHRSKVGKARLKYAIEESKRILGIPDDYLLGIVPASDTGAYEMAMWSMLGPRDVDSCHWESFGKVGHTEA 1242
R++++ AY +S GE G+ G G+G TLHGK+LGVPE AGPMSAAVIKGALNLLLAQEVNYVNAAAVAKDTGLAIEVAFSERDPKGYLNGLSVEFEIDGVLNGRRTMTGTCFGTDTRVVDVDGLEIDFNPSGHMLMFNNPDSPGMLRAVAAILGDQGINIASFALGRVRTGGVAMSCLNLDTPCTEGMLEEIRKIPDIRNVVQASIDSREDPSFRMDTDEASQG VYGTPMPPDKPQHPEFSSGPCKKRPGWSAS+LKSESLGRSHRSKVGKARLKYAIEESKRILGIPDDYLLGIVPASDTGAYEMAMWSMLGPRD+DSCHWESFGK H +A
Sbjct: 362 RKSKLTAY---VSLGERMGALQAQLLGQGKG-----TLHGKNLGVPEKAGPMSAAVIKGALNLLLAQEVNYVNAAAVAKDTGLAIEVAFSERDPKGYLNGLSVEFEIDGVLNGRRTMTGTCFGTDTRVVDVDGLEIDFNPSGHMLMFNNPDSPGMLRAVAAILGDQGINIASFALGRVRTGGVAMSCLNLDTPCTEGMLEEIRKIPDIRNVVQASIDSREDPSFRMDTDEASQGQVYGTPMPPDKPQHPEFSSGPCKKRPGWSASELKSESLGRSHRSKVGKARLKYAIEESKRILGIPDDYLLGIVPASDTGAYEMAMWSMLGPRDIDSCHWESFGKGWHGDA 697
BLAST of mRNA_Ecto-sp13_S_contig8511.19911.1 vs. uniprot
Match: A0A835YXH9_9STRA (D-3-phosphoglycerate dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXH9_9STRA) HSP 1 Score: 436 bits (1121), Expect = 1.790e-141 Identity = 210/312 (67.31%), Postives = 258/312 (82.69%), Query Frame = 1
Query: 307 SIKVTLHGKSLGVPEMAGPMSAAVIKGALNLLLAQEVNYVNAAAVAKDTGLAIEVAFSERDPKGYLNGLSVEFEIDGVLNGRRTMTGTCFGTDTRVVDVDGLEIDFNPSGHMLMFNNPDSPGMLRAVAAILGDQGINIASFALGRVRTGGVAMSCLNLDTPCTEGMLEEIRKIPDIRNVVQASIDSREDPSFRMDTDEASQGHVYGTPMPPDKPQHPEFSSGPCKKRPGWSASKLKSESLGRSHRSKVGKARLKYAIEESKRILGIPDDYLLGIVPASDTGAYEMAMWSMLGPRDVDSCHWESFGKVGHTEA 1242
S+++TLHGK L VPEM GPMSAA++KGALN LLAQEVNYVNA A+ K+ GL+IEVAFS+ DP GY NGL+VEFEIDG+LNGRRT+ GTCFG + RV +D L+IDF P+G+M+ NNPD+PGMLR V++ L G+NIA+FALGRVR GG AMSC+++D P E +L ++R IP +RNV+ +I EDP+FR+D DE QG VYGTPMP DKP +PEFSSGPCKKRPG+S L ++ LGRSHRSK+GKARLKYAIEE+KR+LG+P DYL+GIVPASDTGAYEMAMW+MLGPR +D+C+WESFGK T+A
Sbjct: 373 SMRITLHGKDLAVPEMTGPMSAAILKGALNHLLAQEVNYVNAVALGKELGLSIEVAFSQEDPSGYTNGLTVEFEIDGLLNGRRTVAGTCFGRELRVTSIDSLDIDFLPTGNMIFLNNPDTPGMLRQVSSALARGGVNIANFALGRVRQGGTAMSCISVDGPVPENILADLRAIPGVRNVIPVNIGEMEDPAFRID-DEEFQGVVYGTPMPADKPANPEFSSGPCKKRPGYSLQMLPTDCLGRSHRSKLGKARLKYAIEETKRLLGVPSDYLVGIVPASDTGAYEMAMWNMLGPRPIDACYWESFGKGWFTDA 683
BLAST of mRNA_Ecto-sp13_S_contig8511.19911.1 vs. uniprot
Match: A0A7R9U9F4_9STRA (D-3-phosphoglycerate dehydrogenase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U9F4_9STRA) HSP 1 Score: 298 bits (764), Expect = 9.380e-90 Identity = 162/322 (50.31%), Postives = 221/322 (68.63%), Query Frame = 1
Query: 289 GTGEGASIKVTLHGKSLGVPEMAGPMSAAVIKGALNLLLAQEVNYVNAAAVAKDTGLAIEVAFSERDPKG--YLNGLSVEFEIDGVLNGRRTMTGTCFGT-DTRVVDVDGLEIDFNPSGHMLMFNNPDSPGMLRAVAAILGDQGINIASFALGRVRTGGVAMSCLNLDTPCTEGMLEEIRKIPDIRNVVQASIDSREDPSFRMDTDEAS-QGHVYGTPMPPDKPQHPEFSSGPCKKRPGWSASKLKSESLGRSHRSKVGKARLKYAIEESKRILGIPDDYLLGIVPASDTGAYEMAMWSMLGPRDVDSCHWESFGKVGHTEA 1242
G+G+ +K+ G +G EM+GP+ AA +KG L LL+ +VNYVNA +A++ GL V ++ DP N L+VE EI+G+LNG R MTGT F D R+ ++D E+D PSGH+L+FNN D PG+LR+V+ L + G+NIASF+LGR G A+S + +D L+EIR + ++ NV+ A + +D + R+ ++ S + H+ P KP +P+FSSGPCKKRPG+ S LK+E+LGRSHRSK+GKA+LK AI+E+KRILG+P DYL GIVPASDTGAYEMAMWSMLG R VD +WESFGK ++A
Sbjct: 260 GSGKVRGLKIISAGVEVGKSEMSGPLVAATLKGVLGELLSDDVNYVNAHNLAEEIGLYTAVE-TQADPSSTRVSNELTVELEIEGILNGVRRMTGTVFANGDMRITEIDDFEVDVVPSGHVLIFNNTDRPGVLRSVSEKLSNAGVNIASFSLGRNDPGTTALSIIMVDDDIPSATLDEIRGLQEVYNVMTADLVEMDDENVRLAAEKRSAELHLVPDSRPSMKPANPQFSSGPCKKRPGYDLSALKTEALGRSHRSKIGKAKLKLAIDETKRILGLPSDYLCGIVPASDTGAYEMAMWSMLGERPVDMLYWESFGKGWFSDA 580
BLAST of mRNA_Ecto-sp13_S_contig8511.19911.1 vs. uniprot
Match: A0A7S2W8W5_9STRA (D-3-phosphoglycerate dehydrogenase n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W8W5_9STRA) HSP 1 Score: 295 bits (754), Expect = 1.790e-87 Identity = 154/309 (49.84%), Postives = 205/309 (66.34%), Query Frame = 1
Query: 304 ASIKVTLHGKSLGVPEMAGPMSAAVIKGALNLLLAQEVNYVNAAAVAKDTGLAIEVAFSERDPKGYLNGLSVEFEIDGVLNGRRTMTGTCF-GTDTRVVDVDGLEIDFNPSGHMLMFNNPDSPGMLRAVAAILGDQGINIASFALGRVRTGGVAMSCLNLDTPCTEGMLEEIRKIPDIRNVVQASIDSREDPSFRMDTDEASQGH-VYGTPMPPDKPQHPEFSSGPCKKRPGWSASKLKSESLGRSHRSKVGKARLKYAIEESKRILGIPDDYLLGIVPASDTGAYEMAMWSMLGPRDVDSCHWESFGK 1224
A I+VTL GK++ EMA + A +KG L+ +L VNY+NA+++ + GL + ++R Y + + +EF +G LN RT+TGT F G++ R+VDVDG +DF+P G+ L FNN D PG+++ VA +LG GINI F LGR G VA+ + D P T ++ ++ +P++ NV + P ++D S H +Y MP +P + +FSSGPCKKRPG+ KL ESLGRSHRS +GKARLK AI +SKRILG+PDDYLLGIVPASDTGAYEMAMW+MLG R VD CHWESFGK
Sbjct: 383 ARIRVTLLGKNIATSEMAESIRTATLKGVLSSILTTPVNYINASSLGNELGLKVSTVLADRPDNNYDSSVRLEFLNEGNLNSARTITGTVFKGSELRIVDVDGYAVDFHPKGNCLFFNNEDRPGVVKNVAELLGKHGINIGDFTLGRKLAGDVALGIVATDQPVTNELVAQLETLPEVFNVAAVTF-----PETKLDQVTQSSVHPLYSPSMPSVRPFNSQFSSGPCKKRPGYRLDKLPKESLGRSHRSGLGKARLKKAIVDSKRILGVPDDYLLGIVPASDTGAYEMAMWNMLGERPVDMCHWESFGK 686
BLAST of mRNA_Ecto-sp13_S_contig8511.19911.1 vs. uniprot
Match: W7U408_9STRA (D-3-phosphoglycerate dehydrogenase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U408_9STRA) HSP 1 Score: 291 bits (744), Expect = 4.420e-86 Identity = 154/319 (48.28%), Postives = 214/319 (67.08%), Query Frame = 1
Query: 289 GTGEGASIKVTLHGKSLGVPEMAGPMSAAVIKGALNLLLAQEVNYVNAAAVAKDTGLAIEVAFSERDPKGYLNGLSVEFEIDGVLNGRRTMTGTCFG-TDTRVVDVDGLEIDFNPSGHMLMFNNPDSPGMLRAVAAILGDQGINIASFALGRVRTGGVAMSCLNLDTPCTEGMLEEIRKIPDIRNVVQASIDSREDPSFRMDTDEASQGHVYGTPMPPDKPQHPEFSSGPCKKRPGWSASKLKSESLGRSHRSKVGKARLKYAIEESKRILGIPDDYLLGIVPASDTGAYEMAMWSMLGPRDVDSCHWESFGKVGHTEA 1242
G+G+ I VT+ GK + V EM+ + AV+KG L+ LL Q+VN++NA +A D GL++ ER + N + V+FE+DG LN R+++GT FG ++ R+ ++DG + D P+G ++ FNN D PG L+A+A +L NI+ F+LGR G A+ + LD P + +LEEI +PDI N Q + D FR+ +++ +V G P +P+HP+FSSGP KKRPG+S S L ++ LGRSHRSK+GKA+LK AI+ESKR+L +P+DY LGIVPASDTGAYEMAMWSMLG R VD +WESFGK T+A
Sbjct: 375 GSGKIKRINVTMQGKDVAVSEMSDSIKIAVLKGTLSHLLDQDVNFLNAGPLASDMGLSVNSMLVERQDTQFSNTIKVDFEMDGFLNFSRSISGTVFGGSELRIFEIDGFKTDIPPTGSVVFFNNLDRPGALKAIANVLSKNHCNISHFSLGRQTKAGKALGAITLDEPVPQNVLEEIGVLPDISNCSQVQLLDMPDKVFRIHQ-KSTPAYVAGDARPHVRPEHPQFSSGPTKKRPGYSYSALGTDCLGRSHRSKIGKAKLKLAIDESKRLLQLPEDYRLGIVPASDTGAYEMAMWSMLGERPVDIFYWESFGKGWFTDA 692
BLAST of mRNA_Ecto-sp13_S_contig8511.19911.1 vs. uniprot
Match: A0A7S3M7H8_9STRA (D-3-phosphoglycerate dehydrogenase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M7H8_9STRA) HSP 1 Score: 286 bits (731), Expect = 3.850e-84 Identity = 156/327 (47.71%), Postives = 213/327 (65.14%), Query Frame = 1
Query: 307 SIKVTLHGKSLGVPEMAGPMSAAVIKGALNLLLAQEVNYVNAAAVAKDTGLAIEVAFSERDP--KGYLNGLSVEFEIDGVLN--GRRTMTGTCFGTDT-RVVDVDGLEIDFNPSGHMLMFNNPDSPGMLRAVAAILGDQGINIASFALGRVRTGGVAMSCLNLDTPCTEGMLEEIRKIPDIRNVVQASIDSREDPSFRM----------DTDEASQGHVYGTPMPPDKPQHPEFSSGPCKKRPGWSASKLKSESLGRSHRSKVGKARLKYAIEESKRILGIPDDYLLGIVPASDTGAYEMAMWSMLGPRDVDSCHWESFGKVGHTEA 1242
SI + L GK + ++ + AAVIKG LN L ++V+ +NA A++++ GL + + SE+ GY+N + VE E+ G+LN R + GT FG D R+ VDG +D P HML+FNN D PG+LR V L +NIA F+LGR G +AMS + LD+ ++ + I I N+V + DP+FR+ +T A QGH++GT P KP+HPEFSSGPCKKRPG+ + L+++SLGRSHRSK+GKARL+ AI+++KRIL +PDDYL IVPASDTGAYEMAMW+MLG R VD+C+WESFGK + +A
Sbjct: 375 SITIHLRGKDVSDTKITDVIKAAVIKGVLNELGIEQVSLINAVAMSEEMGLRVLMNMSEKTEVGSGYMNSMCVELELGGMLNMTSVRRIEGTVFGRDELRITQVDGFNLDLPPGEHMLLFNNYDEPGVLRRVVEKLATANVNIAHFSLGRKEKGQMAMSAVVLDSAVPPEVITSLAGINAINNLVAIRLKEPIDPNFRVRSSTLELSASNTTTAQQGHLHGTSKPAQKPRHPEFSSGPCKKRPGYDLASLRTDSLGRSHRSKLGKARLRKAIDDTKRILEVPDDYLCAIVPASDTGAYEMAMWNMLGQRPVDACYWESFGKGWNDDA 701
BLAST of mRNA_Ecto-sp13_S_contig8511.19911.1 vs. uniprot
Match: A0A7S3Y569_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y569_HETAK) HSP 1 Score: 241 bits (616), Expect = 2.800e-71 Identity = 123/230 (53.48%), Postives = 163/230 (70.87%), Query Frame = 1
Query: 544 NGRRTMTGTCF-GT-DTRVVDVDGLEIDFNPSGHMLMFNNPDSPGMLRAVAAILGDQGINIASFALGRVRTGGVAMSCLNLDTPCTEGMLEEIRKIPDIRNVVQASIDSR-EDPSFRMDTDEASQGHVYGTPMPPDKPQHPEFSSGPCKKRPGWSASKLKSESLGRSHRSKVGKARLKYAIEESKRILGIPDDYLLGIVPASDTGAYEMAMWSMLGPRDVDSCHWESFGK 1224
NGRR++TGT F GT + RVVD+DG ID +P+GHML FNN D PG+L+ VA L G+NI F+LGR + G A+ L LD + +E +R + D+ NV +++ ED + + +A G++ G P +P++PEFSSGPCKKRPG+ L ++LGRSHRSK+GK RL+Y+IE SK++L +P+DY LGIVPASDTGA+EMAMWSMLGPR VD C+WESFGK
Sbjct: 1 NGRRSITGTVFPGTHEQRVVDIDGFRIDLDPAGHMLFFNNLDRPGVLKEVAGTLAAAGVNIGYFSLGRAQQGSTALGLLKLDEAVDKATMERLRSLEDVFNVQAVELEAADEDAAAKGGGGDAFSGYISGDNRPQVRPENPEFSSGPCKKRPGYDLRNLYQQALGRSHRSKLGKGRLQYSIELSKQLLRLPEDYRLGIVPASDTGAFEMAMWSMLGPRPVDMCYWESFGK 230
BLAST of mRNA_Ecto-sp13_S_contig8511.19911.1 vs. uniprot
Match: A0A8K1C5K2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C5K2_PYTOL) HSP 1 Score: 226 bits (575), Expect = 3.920e-62 Identity = 137/330 (41.52%), Postives = 196/330 (59.39%), Query Frame = 1
Query: 310 IKVTLHGKSLGVPEMAGPMSAAVIKGALNLLLAQEVNYVNAAAVAKDTGL-AIEVAFSERDPKGYLNGLSVEFEIDGVLNGRRT-MTGTCFGTDT-RVVDVDGLEIDFNPSGHMLMFNNPDSPGMLRAVAAILGDQGINIASFALGRVRTGGVAMSCLNLDTPCTEGMLEEIRKIPDIRNVVQASI-DSREDPSFRMD-----TDEASQGHVYGTP----------MPPDKPQHPEFSSGPCKKRPGWSASKLKSESLGRSHRSKVGKARLKYAIEESKRILGIPDDYLLGIVPASDTGAYEMAMWSMLGPRDVDSCHWESFGKVGHTEA 1242
+ V G+ L ++AG + + V+KG L+ +L +EV + NA +A+ G+ +E E + N L+V FE + NG T +TGT FG + R+V + L +D PSG ML+F+N D PG+L AV ++L INI F L R GG A+ LN+D P + +++E+ + + N+ + ++ D P R + +DE + ++ G+ P KP P F SGPCKKRPG+S +K+ LGRSHRS +GK L+ AI SK+ILG+PDDYLLGIVPASDTGA+EMAMW+MLG R VD C+WESFG+ +A
Sbjct: 375 VLVISEGRRLTSDDLAGQLVSGVLKGLLSHMLEEEVTFANAKQLAEVMGIECVEHKHEEATNSSFSNQLTVVFEKE---NGSTTKITGTVFGKNQLRLVGFNDLTMDAIPSGSMLLFHNNDEPGVLHAVTSVLASNQINIGCFGLAREDLGGHAVGVLNVDDPIPDHVIDELEALGKVSNIRRINLLDLNAAPGSRWEKFLNLSDEIGEANLDGSEDDVKVVAHHKKPAMKPSSPNFGSGPCKKRPGYSLAKISDICLGRSHRSVLGKGLLEEAIIRSKKILGLPDDYLLGIVPASDTGAFEMAMWNMLGQRPVDICYWESFGEQWFKDA 701
BLAST of mRNA_Ecto-sp13_S_contig8511.19911.1 vs. uniprot
Match: A0A5A8DPE6_CAFRO (D-3-phosphoglycerate dehydrogenase n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DPE6_CAFRO) HSP 1 Score: 223 bits (568), Expect = 3.770e-61 Identity = 134/328 (40.85%), Postives = 180/328 (54.88%), Query Frame = 1
Query: 310 IKVTLHGKSLGVPEMAGPMSAAVIKGALNLLLAQE-VNYVNAAAVAKDTGLAIEVAFSERDPKGYLNGLSVEFEID------GVLNGRRTMTGTCFGT-DTRVVDVDGLEIDFNPSGHMLMFNNPDSPGMLRAVAAILGDQGINIASFALGRVRTGGVAMSCLNLDTPCTEGMLEEIRKIPDIRNVVQASIDSREDPSFRMDTDEASQGHVYGTPM---------PPDKPQHPEFSSGPCKKRPGWSASKLKSESLGRSHRSKVGKARLKYAIEESKRILGIPDDYLLGIVPASDTGAYEMAMWSMLGPRDVDSCHWESFGKVGHTEA 1242
+ V LHG P +A + +A ++G L L E VN VN +A+ GL + Y N +SVE + D + NG + GT F D R+V V G D P+G++L+FNN D PG+LR++ LG+ GINIA+F LGR GG A+ + D P TE +E IR++ ++NV +D + + M P ++P +F SGP KKRPGW+ S L GRSHRS +GKA+L AIEE+K +L +P+ Y +GIVPASDTGAYEMAMW+MLG R VD HWESFGK T+A
Sbjct: 388 LTVRLHGSRFQDPSVADVIQSAAVRGFLQAALPDEAVNVVNTHMLAEQLGLKVRTEVHPTSDANYSNLVSVELDTDEGSAGPAIDNGTSVVAGTVFNERDGRLVRVGGYSCDVMPAGNVLLFNNRDKPGVLRSIMRELGNAGINIANFGLGRHEAGGEALGIIITDEPVTEEAVEAIRRVDSVKNVRCVRVDEGVVATAAATXXAVGKSTAKDMAMAVPATAARRPSERPASAQFGSGPTKKRPGWTLSTLVDAPTGRSHRSALGKAKLLRAIEETKELLELPEGYRVGIVPASDTGAYEMAMWTMLGQRPVDVFHWESFGKGWLTDA 715
BLAST of mRNA_Ecto-sp13_S_contig8511.19911.1 vs. uniprot
Match: A0A662WSZ3_9STRA (ACT domain-containing protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WSZ3_9STRA) HSP 1 Score: 216 bits (550), Expect = 7.290e-60 Identity = 134/331 (40.48%), Postives = 188/331 (56.80%), Query Frame = 1
Query: 310 IKVTLHGKSLGVPEMAGPMSAAVIKGALNLLLAQEVNYVNAAAVAKDTGL-AIEVAFSERDPKGYLNGLSVEFEIDGVLNGRRTMTGTCFGTDT-RVVDVDGLEIDFNPSGHMLMFNNPDSPGMLRAVAAILGDQGINIASFALGRVRTGGVAMSCLNLDTPCTEGMLEEIRKIP---DIRNVVQASIDSR------------EDPSFRMDTDEASQGH---VYGTPMPPDKPQHPEFSSGPCKKRPGWSASKLKSESLGRSHRSKVGKARLKYAIEESKRILGIPDDYLLGIVPASDTGAYEMAMWSMLGPRDVDSCHWESFGKVGHTEA 1242
+ V G + E+AG + V+KG L+ +L +EV + NA +A+ G+ +E E G+ + L+V FE + + + +TGT FG + R+V D L +D PSG ML+FNN D PG+L V ++L INI F L R +G A+S LN+D + ++EE+ + +R V +++ +D S +D A +G V P P KP P F SGPCKKRPG+S + L +LGRSHRS +GK L+ +I SK+IL +P DY LGIVPASDTGA+EMAMWSMLG R VD C+WE+FGK +A
Sbjct: 106 VLVVSEGPKVTSSELAGQLVKGVLKGLLSHMLEEEVTFTNAKQIAEVMGIQTVEHKHEEASGSGFSDQLTVIFEKENGTS--KKITGTVFGKNQLRLVAFDDLPMDAIPSGSMLLFNNTDQPGVLHKVTSVLAKNQINIGCFGLAREESGAAAVSVLNVDEAIPDSVMEELEALDMLTHLRRVNLLELNTALSGGVWEKFLKPKDASVVVDEAAAQEGESVAVVRHPKPRVKPASPNFGSGPCKKRPGYSLAALSDVALGRSHRSTLGKGLLEESIVRSKKILKLPKDYHLGIVPASDTGAFEMAMWSMLGERPVDICYWETFGKQWFKDA 434 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8511.19911.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8511.19911.1 >prot_Ecto-sp13_S_contig8511.19911.1 ID=prot_Ecto-sp13_S_contig8511.19911.1|Name=mRNA_Ecto-sp13_S_contig8511.19911.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=414bp GGRSVAGRVPERASAARAEGACHAPQGGVLAAPGGVDTRRSGEGGEGHRDback to top mRNA from alignment at Ecto-sp13_S_contig8511:79..6438+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8511.19911.1 ID=mRNA_Ecto-sp13_S_contig8511.19911.1|Name=mRNA_Ecto-sp13_S_contig8511.19911.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6360bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8511:79..6438+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8511:79..6438+ >mRNA_Ecto-sp13_S_contig8511.19911.1 ID=mRNA_Ecto-sp13_S_contig8511.19911.1|Name=mRNA_Ecto-sp13_S_contig8511.19911.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1242bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8511:79..6438+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |