mRNA_Ecto-sp13_S_contig124.1991.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig124.1991.1
Unique NamemRNA_Ecto-sp13_S_contig124.1991.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig124.1991.1 vs. uniprot
Match: A0A6H5KFS5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFS5_9PHAE)

HSP 1 Score: 552 bits (1423), Expect = 4.510e-188
Identity = 361/438 (82.42%), Postives = 370/438 (84.47%), Query Frame = 1
Query:  151 MDFSAAGKAAAGNGEGRGIRGRYKLIVASNRDEDLGRPTAPIHFWKDAGSNLLAG--------RDLVAGGTWLGVSRSGKFATLTNVSSTWESVLEVVALGGWANKAAAIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGWLYALCAAAGLVTAASVSLAVAVARIKARKSRGGLVADFLKGDEDAETYCVRLSKERRRFAGFNLVLSDPSGAWLLSNRDEAGITRLPHGFYGISNDTLDKPWAKMIYGKSRVLQVLLRMTADPTLTEEDLVDLLMDVLADDTPVLAGDPYQYVCIPPMVWVPKLKLPWAKSPSPPLMYGTRSSTVVLVDAAGRTRVVERNLGSVVGGAGEEGKRSGQKGTVAATAAGAGASAEEAKFCRIRDADRTSFEFCDV 1440
            MDFSA G AAAGNGEGRGIRGRYKLIVASNRDEDLGRPTAPIHFWKDAGSNLLAG        RDLVAGGTWLGVSRSGKFATLTNV STWES+LEVVALGGWANKAAA  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                    GWLYALCAAAGLVTAASV LAVAVARIKARKSRGGLVADFLKGDEDAETYC RLSKERRRFAGFNLVLSDPSGAWLLSNRDEAGITRLPHGFYGISNDTLDKPWAKM++GKSRVLQVLLRMTADPTLTEEDLVDLLMDVLAD+TP+LAGDP Q VC+PP VW+  LKLPWAKSPS P M GTRSSTVVLVDAAGRTRVVERNLGSVVGGAGEE                       A+ CR+RDADRTS EFCDV
Sbjct:    1 MDFSAEGNAAAGNGEGRGIRGRYKLIVASNRDEDLGRPTAPIHFWKDAGSNLLAGEYPKARPRRDLVAGGTWLGVSRSGKFATLTNVFSTWESMLEVVALGGWANKAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSLGFSTPAGSSSSSSLL--GWLYALCAAAGLVTAASVPLAVAVARIKARKSRGGLVADFLKGDEDAETYCARLSKERRRFAGFNLVLSDPSGAWLLSNRDEAGITRLPHGFYGISNDTLDKPWAKMLHGKSRVLQVLLRMTADPTLTEEDLVDLLMDVLADETPLLAGDPCQCVCMPPTVWLLGLKLPWAKSPSRPPMRGTRSSTVVLVDAAGRTRVVERNLGSVVGGAGEEXXXXXXXXXXXXXXXXXXXXXXXAEICRMRDADRTSVEFCDV 436          
BLAST of mRNA_Ecto-sp13_S_contig124.1991.1 vs. uniprot
Match: D8LBN3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBN3_ECTSI)

HSP 1 Score: 370 bits (949), Expect = 8.310e-119
Identity = 242/291 (83.16%), Postives = 247/291 (84.88%), Query Frame = 1
Query:  151 MDFSAAGKAAAGNGEGRGIRGRYKLIVASNRDEDLGRPTAPIHFWKDAGSNLLAGRDLVAGGTWLGVSRSGKFATLTNVSSTWESVLEVVALGGWANKAAAIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGWLYALCAAAGLVTAASVSLAVAVARIKARKSRGGLVADFLKGDEDAETYCVRLSKERRRFAGFNLVLSDPSGAWLLSNRDEAGITRLPHGFYGISNDTLDKPWAKMIYGKSRVLQ 1023
            MDFSAAGKAAAGNGEGRGIRGRYKLIVASNRDEDLGRPTAPIHFWKDAGSNLLAGRDLVAGGTWLGVSRSGKFATLTNVSSTWE+VLE V LGGWANK AA+AXXXXXXXXXXXXXXXXX         XXXXXXXXXXXXXXXXXXXXXXXX                      GWLYALCAAAGLVTAASV LAVAVAR KARKSRGGLVADFLKGDEDAETYC RLSKERRR+AGFNLVLSDPSGAWLLSNRDEAGITRLPHGFYGISNDTLDKPWAK +     + Q
Sbjct:    1 MDFSAAGKAAAGNGEGRGIRGRYKLIVASNRDEDLGRPTAPIHFWKDAGSNLLAGRDLVAGGTWLGVSRSGKFATLTNVSSTWENVLEDVTLGGWANKVAAVAXXXXXXXXXXXXXXXXXRAGHENGISXXXXXXXXXXXXXXXXXXXXXXXXVSSLGLSRPAGSSLSSSSL---GWLYALCAAAGLVTAASVPLAVAVARAKARKSRGGLVADFLKGDEDAETYCSRLSKERRRYAGFNLVLSDPSGAWLLSNRDEAGITRLPHGFYGISNDTLDKPWAKPVVATGWIKQ 288          
BLAST of mRNA_Ecto-sp13_S_contig124.1991.1 vs. uniprot
Match: D8LBN2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBN2_ECTSI)

HSP 1 Score: 150 bits (378), Expect = 4.820e-39
Identity = 77/83 (92.77%), Postives = 79/83 (95.18%), Query Frame = 1
Query: 1084 MDVLADDTPVLAGDPYQYVCIPPMVWVPKLKLPWAKSPSPPLMYGTRSSTVVLVDAAGRTRVVERNLGSVVGGAGEEGKRSGQ 1332
            MDVLAD+TPVLAGDP Q VCIPP VWVPKLKLPWAKSPS PLMYGTRSSTVVLVDAAGRTRVVERNLGSVVGGAGEEGKRSG+
Sbjct:    1 MDVLADETPVLAGDPCQNVCIPPTVWVPKLKLPWAKSPSRPLMYGTRSSTVVLVDAAGRTRVVERNLGSVVGGAGEEGKRSGK 83          
BLAST of mRNA_Ecto-sp13_S_contig124.1991.1 vs. uniprot
Match: W0SF07_9PROT (Uncharacterized protein n=1 Tax=Sulfuritalea hydrogenivorans sk43H TaxID=1223802 RepID=W0SF07_9PROT)

HSP 1 Score: 117 bits (292), Expect = 1.270e-25
Identity = 102/351 (29.06%), Postives = 133/351 (37.89%), Query Frame = 1
Query:  205 IRGRYKLIVASNRDEDLGRPTAPIHFWKDAGSNLLAGRDLVAGGTWLGVSRSGKFATLTNVSSTWESVLEVVALGGWANKAAAIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGWLYALCAAAGLVTAASVSLAVAVARIKARKSRGGLVADFLKGDEDAETYCVRLSKERRRFAGFNLVLSDPSGAWLLSNRDEAGITRLPHGFYGISNDTLDKPWAKMIYGKSRVLQVLLRMTADPTLTEEDLVDLLMDVLADDTPVLAGDPYQYVCIPPMVWVPKLKLPWAKSPSPPLMYGTRSSTVVLVDAAG 1257
            +   Y L+VA+NRDE   RPTAP  FWK+A   +LAGRDL AGGTW+GV+R+G+FA LTN     ++                                                                                                                     K   SRGGLVADFL GDE  + Y  R++   R+  G+NL++SD +  W  SN   A   +L  G YG+SN  LD PW K+  GK+ + Q L R+  D         D L D+L DD   +  D +      P+ W   L   + KSP     YGTR STV+ V   G
Sbjct:   10 VHADYPLVVAANRDEFFVRPTAPAAFWKEA-PQMLAGRDLEAGGTWMGVTRNGRFAALTNFRDPAQNR--------------------------------------------------------------------------------------------------------------------KGAPSRGGLVADFLAGDEAPQDYLERIAPLGRQCNGYNLLMSDGATLWWSSNMGGAA-RQLESGVYGVSNHLLDTPWPKVGAGKTALAQALERLPDD---------DALFDLLRDDG--IHPDAHLPQTGVPLDWERLLSSAFVKSPG----YGTRGSTVLSVGTDG 227          
BLAST of mRNA_Ecto-sp13_S_contig124.1991.1 vs. uniprot
Match: A0A3A4WW61_9DELT (NRDE family protein n=1 Tax=Desulfobacteraceae bacterium TaxID=2049433 RepID=A0A3A4WW61_9DELT)

HSP 1 Score: 103 bits (257), Expect = 7.600e-21
Identity = 93/366 (25.41%), Postives = 137/366 (37.43%), Query Frame = 1
Query:  217 YKLIVASNRDEDLGRPTAPIHFWKDAGSNLLAGRDLVAGGTWLGVSRSGKFATLTNVSSTWESVLEVVALGGWANKAAAIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGWLYALCAAAGLVTAASVSLAVAVARIKARKSRGGLVADFLKGDEDAETYCVRLSKERRRFAGFNLVLSDPSGAWLLSNRD-------EAGITRLPHGFYGISNDTLDKPWAKMIYGKSRVLQVLLRMTADPTLTEEDLVDLLMDVLADDTPVL----AGDPYQYVCIPPMVWVPKLKLPWAKSPSPPLMYGTRSSTVVLVDAAGRTRVVERN 1281
            Y++I+A+NRDE   RPT  + +W DA   +LAGRDL A GTWLG++R+G+FA +TN               G   K  A                                                                                                         SRG +V+D+L+       Y   + K R  ++GFNL+L D  G +  SNR          GI +L  G YGISN  LD PW K+  GK+ +  ++ +   +  ++ E ++++L D  A    +L    AG  ++ +  P  +  P               YGTRSS+VVLVD AG+ +  ER+
Sbjct:   14 YRMILAANRDEYYARPTRALSYWDDA-PGVLAGRDLEAMGTWLGITRTGRFAAVTNFRE------------GQKRKEGA--------------------------------------------------------------------------------------------------------PSRGRIVSDYLEARTPPGQYIETIDKRRDVYSGFNLLLGDRDGLYYYSNRTPHRAHGRSPGIRKLKPGVYGISNHLLDTPWPKVAIGKNMLRSIIEK---EEKISNEAILEMLKDATAPPDEMLPDTGAGLAWERILSPLFITSPD--------------YGTRSSSVVLVDHAGKVQFTERS 245          
BLAST of mRNA_Ecto-sp13_S_contig124.1991.1 vs. uniprot
Match: A0A271J1Z0_9BACT (Uncharacterized protein n=1 Tax=Rubrivirga marina TaxID=1196024 RepID=A0A271J1Z0_9BACT)

HSP 1 Score: 101 bits (251), Expect = 3.730e-20
Identity = 95/364 (26.10%), Postives = 130/364 (35.71%), Query Frame = 1
Query:  205 IRGRYKLIVASNRDEDLGRPTAPIHFWKDAGSNLLAGRDLVAGGTWLGVSRSGKFATLTNVSSTWESVLEVVALGGWANKAAAIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGWLYALCAAAGLVTAASVSLAVAVARIKARKSRGGLVADFLKGDEDAETYCVRLSKERRRFAGFNLVLSDPSGAWLLSNRDEAGITRLPHGFYGISNDTLDKPWAKMIYGKSRVLQVLLRMTADPTLTEEDLVDLLMD--VLADDTPVLAGDPYQYVCIPPMVWVPKLKLPWAKSPSPPLM----YGTRSSTVVLVDAAGRTRVVER 1278
            +  +++L++  NRDE   RP AP+ +W DA   +LAGRDL AGGTWLGV+ +G++  LTNV                                                                                                                            + +SRG LVADFL+ D  A +Y   +  ER  + GFNLV+ DP    ++S R +  +  L  G YGISND LD PW K++  + R+   L     DP     DL+ +L D     DD     G                + L W +  SP  +    YGTR ST + +D  G  RVVER
Sbjct:   10 VHPQHRLVLIGNRDEAFARPAAPLAWWNDA-PGVLAGRDLEAGGTWLGVTDTGRWGVLTNVRDPHHPR--------------------------------------------------------------------------------------------------------------------PSTRSRGALVADFLRLDGTARSYAEAVHAERDTYDGFNLVVGDPDSVHVVSTRHDE-MLELERGVYGISNDRLDTPWPKVVRARQRLRDALRSDPVDPA----DLLPILDDREPAPDDALPDTG----------------VGLEWERRLSPVRIVADGYGTRVSTALALDRDGGGRVVER 235          
BLAST of mRNA_Ecto-sp13_S_contig124.1991.1 vs. uniprot
Match: A0A077WYM8_9FUNG (Uncharacterized protein n=1 Tax=Lichtheimia ramosa TaxID=688394 RepID=A0A077WYM8_9FUNG)

HSP 1 Score: 101 bits (251), Expect = 8.020e-20
Identity = 100/376 (26.60%), Postives = 140/376 (37.23%), Query Frame = 1
Query:  214 RYKLIVASNRDEDLGRPTAPIHFWKDAGSNLLAGRDLVAG------GTWLGVSRSGKFATLTNVSSTWESVLEVVALGGWANKAAAIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGWLYALCAAAGLVTAASVSLAVAVARIKARKSRGGLVADFLKGD-EDAETYCVRLSKERRRFAGFNLVLSDPSGAW-----LLSNRDEAGITRLPHG-FYGISNDTLDKPWAKMIYGKSRVLQVLLRMTADPTLTEEDLVDLLMDVLADDTPVLAGDPYQYVCIPPMVWVPKLK----LP---WAKSPSPPLMYGTRSSTVVLVDAAGRTRVVERN 1281
            +Y+ I ASNRDE L RPTAP HFW     ++L+G DL AG      GTWLG++R G+FA LTN         E   LG                                                                                                               R SRG L  DFL+GD + A  Y   L ++   + GF+L+  +  G         SNR++  +T L  G  YG+SN  LD PW K+  G++    ++    +   L+EE L++ L D+L   T    G P   +     + + K K    +P   + KS     +YGTR+STV+LVD  G T  +ER+
Sbjct:   13 KYRFIFASNRDELLDRPTAPAHFWPSPNEHILSGTDLEAGATPSHDGTWLGITRDGRFAALTNYR-------EKKYLG---------------------------------------------------------------------------------------------------------------RMSRGALTRDFLQGDNKSAVEYMENLKEQAGEYGGFSLICMNLKGEHHQDMAYFSNREDVQVTLLSQGEIYGLSNSVLDNPWEKVDSGRAIFRDII----SQSHLSEEQLIESLFDLLRTTTDS-CGSPTMDISQDSAIALEKAKKRIFIPLFLFGKS-----IYGTRTSTVILVDHQGNTTFIERD 260          
BLAST of mRNA_Ecto-sp13_S_contig124.1991.1 vs. uniprot
Match: UPI00047CE1D6 (NRDE family protein n=1 Tax=Bacillus sp. J33 TaxID=935836 RepID=UPI00047CE1D6)

HSP 1 Score: 99.0 bits (245), Expect = 2.040e-19
Identity = 93/350 (26.57%), Postives = 135/350 (38.57%), Query Frame = 1
Query:  214 RYKLIVASNRDEDLGRPTAPIHFWKDAGSNLLAGRDLVAGGTWLGVSRSGKFATLTNVSSTWESVLEVVALGGWANKAAAIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGWLYALCAAAGLVTAASVSLAVAVARIKARKSRGGLVADFLKGDEDAETYCVRLSKERRRFAGFNLVLSDPSGAWLLSNRDEAGITRLPHGFYGISNDTLDKPWAKMIYGKSRVLQVLLRMTADPTLTEEDLVDLLMDVLADDTPVLAGDPYQYVCIPPMVWVPK--LKLPWAKSPSPPLM----YGTRSSTVVLV 1245
            +YKLIVA+NRDE   RPTAP HFW+D   N+LAGRDL   GTW+G++++G+FA LTN     E+                                                                                                                     + ++SRG LVADFLK +   E Y  +++KER+++ G+NL+  +    +  SN  E  + +L  G YG+SN  L+  W K+  GK    + L ++T     T+  L + L  +L D  P             P   +PK  + L W +  SP  +    YGTRSSTV+L+
Sbjct:   13 KYKLIVAANRDEFYERPTAPAHFWEDH-PNILAGRDLSKMGTWMGITKAGRFAALTNYRDPKEAT--------------------------------------------------------------------------------------------------------------------EGKRSRGELVADFLKDNIQPEAYMKKIAKERQQYPGYNLLAGNSEELYYYSNV-EGRMEKLRPGIYGLSNHVLNTEWPKVQKGK----EGLAKLTES---TKGGLPEELFTLLQDADPA------------PDELLPKTGVSLEWERILSPLFIKSEGYGTRSSTVMLM 225          
BLAST of mRNA_Ecto-sp13_S_contig124.1991.1 vs. uniprot
Match: UPI000A2A637A (transport and Golgi organization protein 2 homolog isoform X1 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A637A)

HSP 1 Score: 99.4 bits (246), Expect = 2.840e-19
Identity = 97/380 (25.53%), Postives = 141/380 (37.11%), Query Frame = 1
Query:  217 YKLIVASNRDEDLGRPTAPIHFWKDAGSNLLAGRDLVAG---GTWLGVSRSGKFATLTNVSSTWESVLEVVALGGWANKAAAIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGWLYALCAAAGLVTAASVSLAVAVARIKARKSRGGLVADFLKGDEDAETYCVRLSKERRRFAGFNLVLSD-PSGA----WLLSNRDEAGITRLPHGFYGISNDTLDKPWAKMIYGKSRVLQVLLRMTADPTLTEEDLVDLLMDVLAD--------------DTPVLAGDPYQY--VCIPPMVWVPKLKLPWAKSPSPPLMYGTRSSTVVLVDAAGRTRVVERNL 1284
            Y+LI+ASNRDE   RPTAP  FW  A   +L G DL  G   GTWLG+S++GKF  LTN   ++E++ +  ALG                                                                                                                  RG LV DFL  +E AE Y  ++      + GFNL++ + PS +    +   N +E  + RL  GF+G+SN  L+ PW K++YGK +  +V+   +      +ED+VD L  +L++                P+    P++Y   C    V  P+              YGTR+STVV+VD  G    +E+ L
Sbjct:   17 YRLIIASNRDEFYSRPTAPAKFWI-ANPYVLGGVDLFPGKEGGTWLGISKTGKFGFLTNYRQSFEAISBE-ALG------------------------------------------------------------------------------------------------------------------RGCLVTDFLTSNESAEDYMTKIQHNGPLYNGFNLLVGEMPSTSEIKVYSYCNMEEKNVQRLEPGFHGLSNRLLNSPWPKVVYGKQKFTEVIXTSS-----DKEDMVDKLFALLSERRRHFPDEDDGCYTSNPLDESLPHEYKEACRAIFVXFPEYG------------YGTRTSTVVIVDVNGHGTFIEKTL 263          
BLAST of mRNA_Ecto-sp13_S_contig124.1991.1 vs. uniprot
Match: UPI001F2CA522 (NRDE family protein n=1 Tax=Pelomonas sp. P7 TaxID=2906763 RepID=UPI001F2CA522)

HSP 1 Score: 99.0 bits (245), Expect = 2.910e-19
Identity = 98/377 (25.99%), Postives = 142/377 (37.67%), Query Frame = 1
Query:  214 RYKLIVASNRDEDLGRPTAPIHFWKDAGSNLLAGRDLVAGGTWLGVSRSGKFATLTNVSSTWESVLEVVALGGWANKAAAIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGWLYALCAAAGLVTAASVSLAVAVARIKARKSRGGLVADFLKGDEDAETYCVRLSKERRRFAGFNLVLSDPSGA---WLLSNRDEAGITRLPHGFYGISNDTLDKPWAKMIYGKSRVLQVLLRMTADPTLTEEDLVDLLMDVLADDTPVL--------AGDPYQYVCIPPMVWVPKLKLPWAKSPSPPLMYGTRSSTVVLVDAAGRTRVVERNLGSVVGGAGE 1311
            R+ L++A+NRDE   RP AP+ +W+ AG+ +LAGRDL AGGTW G++R+G+ A LTN+        +                                                                                                                      SRG LV D+L+ D+DA  +   L+     + GFNL+ +D +     W+ SNR  +   RLP G +G+SN  LD PW K +  K+ +   L    ADP    + L++ L   LAD TP           G   + +  P  V +P    P         +YGTR STV++ +A GR  VVER++ +   G GE
Sbjct:   13 RFPLVIAANRDEFFARPAAPMAWWQVAGTEVLAGRDLSAGGTWFGLTRAGRLALLTNIREPGRQRADA--------------------------------------------------------------------------------------------------------------------PSRGALVVDWLRRDDDATRFAASLAPG---YNGFNLITADLARRDWHWI-SNRTPSA-QRLPDGIHGLSNAALDTPWPKTLGLKAALASAL---AADPA--PDVLIERLFQALADPTPAPDAALPDTGVGLARERLLSPRFVRLPDPDAPDLA------VYGTRCSTVLVQEADGRLTVVERSVAADGRGTGE 257          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig124.1991.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KFS5_9PHAE4.510e-18882.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LBN3_ECTSI8.310e-11983.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LBN2_ECTSI4.820e-3992.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
W0SF07_9PROT1.270e-2529.06Uncharacterized protein n=1 Tax=Sulfuritalea hydro... [more]
A0A3A4WW61_9DELT7.600e-2125.41NRDE family protein n=1 Tax=Desulfobacteraceae bac... [more]
A0A271J1Z0_9BACT3.730e-2026.10Uncharacterized protein n=1 Tax=Rubrivirga marina ... [more]
A0A077WYM8_9FUNG8.020e-2026.60Uncharacterized protein n=1 Tax=Lichtheimia ramosa... [more]
UPI00047CE1D62.040e-1926.57NRDE family protein n=1 Tax=Bacillus sp. J33 TaxID... [more]
UPI000A2A637A2.840e-1925.53transport and Golgi organization protein 2 homolog... [more]
UPI001F2CA5222.910e-1925.99NRDE family protein n=1 Tax=Pelomonas sp. P7 TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig124contigEcto-sp13_S_contig124:26961..32248 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeBacteria
Stop1
Start1
Seed ortholog score108.6
Seed ortholog evalue7.7e-21
Seed eggNOG ortholog1122129.AUEF01000007_gene1754
Model size2383
Hectar predicted targeting categoryother localisation
Exons6
EggNOG free text desc.Transport and Golgi organisation 2
EggNOG OGs1UYHE@1239,4H0H7@90964,4HCA1@91061,COG3332@1,COG3332@2
Ec32 ortholog descriptionNRDE protein domains
Ec32 orthologEc-27_003340.2
Cds size1368
COG Functional cat.S
Best tax levelStaphylococcaceae
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig124.1991.1prot_Ecto-sp13_S_contig124.1991.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig124 27036..31308 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462659.8828456-UTR-Ecto-sp13_S_contig124:26960..270351681462659.8828456-UTR-Ecto-sp13_S_contig124:26960..27035Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig124 26961..27035 +
1681462659.9661562-UTR-Ecto-sp13_S_contig124:31308..322481681462659.9661562-UTR-Ecto-sp13_S_contig124:31308..32248Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig124 31309..32248 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462659.9006755-CDS-Ecto-sp13_S_contig124:27035..270371681462659.9006755-CDS-Ecto-sp13_S_contig124:27035..27037Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig124 27036..27037 +
1681462659.91279-CDS-Ecto-sp13_S_contig124:28282..285181681462659.91279-CDS-Ecto-sp13_S_contig124:28282..28518Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig124 28283..28518 +
1681462659.9221973-CDS-Ecto-sp13_S_contig124:28718..292481681462659.9221973-CDS-Ecto-sp13_S_contig124:28718..29248Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig124 28719..29248 +
1681462659.9322412-CDS-Ecto-sp13_S_contig124:29455..296051681462659.9322412-CDS-Ecto-sp13_S_contig124:29455..29605Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig124 29456..29605 +
1681462659.9497132-CDS-Ecto-sp13_S_contig124:30088..302061681462659.9497132-CDS-Ecto-sp13_S_contig124:30088..30206Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig124 30089..30206 +
1681462659.957751-CDS-Ecto-sp13_S_contig124:30976..313081681462659.957751-CDS-Ecto-sp13_S_contig124:30976..31308Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig124 30977..31308 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig124.1991.1

>prot_Ecto-sp13_S_contig124.1991.1 ID=prot_Ecto-sp13_S_contig124.1991.1|Name=mRNA_Ecto-sp13_S_contig124.1991.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=456bp
MCILFLYHALGKEAGHDDDAPPLASMDFSAAGKAAAGNGEGRGIRGRYKL
IVASNRDEDLGRPTAPIHFWKDAGSNLLAGRDLVAGGTWLGVSRSGKFAT
LTNVSSTWESVLEVVALGGWANKAAAIAAAATAAAAAAAAAAAILRARSG
HEHGSSSSDATSGSSGDGGGWGAAAAAAAVVSSLGLSRPADSSSSSSSSL
GWLYALCAAAGLVTAASVSLAVAVARIKARKSRGGLVADFLKGDEDAETY
CVRLSKERRRFAGFNLVLSDPSGAWLLSNRDEAGITRLPHGFYGISNDTL
DKPWAKMIYGKSRVLQVLLRMTADPTLTEEDLVDLLMDVLADDTPVLAGD
PYQYVCIPPMVWVPKLKLPWAKSPSPPLMYGTRSSTVVLVDAAGRTRVVE
RNLGSVVGGAGEEGKRSGQKGTVAATAAGAGASAEEAKFCRIRDADRTSF
EFCDV*
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mRNA from alignment at Ecto-sp13_S_contig124:26961..32248+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig124.1991.1 ID=mRNA_Ecto-sp13_S_contig124.1991.1|Name=mRNA_Ecto-sp13_S_contig124.1991.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5288bp|location=Sequence derived from alignment at Ecto-sp13_S_contig124:26961..32248+ (Ectocarpus species13 EcNAP12_S_4_19m)
ACTGCTGTGCTGTACACTTGCTGTGAGCGAGAATACAAGACGCGGATTTG GAGAGCGGACGGCCCAGGAAGAAATATGTGCGTTCTACATACAGTTGAGG CGAAGGTGTTATTGGCTCATCTATGCTACTACTGCTGTTGCAAGCTTGGT AGCGTACCAATGTGGCTTGGCCTCGAGTAGCAGCAACACCGCGGGTATGT TGTAGCTTTAGCCAAGTTGCTGTTACACGTTGCAGCTTTCTTACACCACT CGCGTGGAAGATCGTAGAAGAAGAGAGGCCCATCTCATGCATGCGTACAC AACAGCGGGTTATATGGGAAGCAGGTGCTGAGGTGCCCTCTGCTGCACTT TTGTCCAACATGCGCAGAACGGTTGCACCGACATCGGCATCCGGCATTCG GAGGCCGCTGTCGCAATCCATCAATCAAACTGTCCAACCCAACATACGGT CTTGCTCTATGTCTGCTTCGGTCGGTATTTTCATTGTTGCATTTTTAAGT TGTTCTTGAAATACCAATGCTACGCTGAAACACGTGTACTGATGCCTGTT ATACACTTGTCGCCTTATAATAAATAGGACGAAAACACACACTAAACTAT GTTTCTACGAGTCCCCGAGCAGCAAGTATATAGCGATATCTTCCCTGTGG GTCGCAGGCTCTATGGGACAGTTTGTGGTGGAAAGGTCTTTGTGTTGCAT CCGTAGAACACACATATTTGGCACACATGCATTTCATGCGTATGCATCCC AAACGGTCCGACGGTACTCCCTGCTTGATGTTGATCTTTGTTAGATGGGC AGAGTGTGGTTGTTGCGCCGCGGTTGTACAGCATGTACGGCATAGGCGAT CGTCAGCAGGCGAGCGTTGGCAGGTGTACACGAACAATTTGGCGTGTGTG CGTATGTCGGTGGTGGCTTGCCCAACTTGTACTGGAGGCCACGTATCAAA TCGAATGAAGCTTTTGCTTCTCGGTCTCGTCGGGTCGTTATCCGTGGGTC CGTCTGGTGTCGGTTCACGGAAGCCCTTGCCGTTGGTGACCGCTCTGATT ATTCTTTTCGGCACCTCGCGGCGGCACTCTCATTTTTTGGTGGTTGAACC ATCGCCAGCTAGTACGTGTCGATCTCGTCTTAAAGCCCCCACCGTCTCTC CACCCGCGGCGGTCCCTCTCCATTCGCTCTTGCTTGTGGTGCACTCTTCG ATTCCACCGTGAACTATATTGAAAAATTACTCGAGCATTTGATAACAGGA AACAACAGCAACAATAGTAACAACAACAGCAACCACAACGACACGATCTG TCCGTGCTCGAACGCTTCGCAGGTGTATATTGTTCCTCTATCACGCTCTC GGCAAAGAGGCGGGCCACGATGATGATGCCCCCCCCCTCGCGTCGATGGA CTTCTCGGCGGCGGGGAAGGCCGCGGCAGGCAACGGTGAAGGCCGCGGGA TTCGCGGCCGCTACAAGCTGATCGTCGCCTCCAACAGGGACGAAGACCTC GGCCGACCGACGGCCCCCATTCACTTCTGGAAGGACGCGGGCTCGAACTT GCTGGCAGGCTAGTATCCAAAGGCGCGACAACGTGTCTTGCGCCTGTTAC AGTACGTAGGTCTGGTCTGGCCGTTTTCTCTCTTCGAAAAGCGTAGAACG AGAGAATCGAACGAATGAGACAGACAGCCGAGCATCCTGCCCGTCCTGAT TGCCATGCCTGCATCCTCCCCCCCCTCACTCCCATCCACATTTTGTATGC ATACGAAGGTCGCGATCTGGTCGCAGGTGGGACGTGGCTGGGCGTGAGCC GCTCCGGAAAGTTCGCCACCCTGACTAACGTCTCCTCGACCTGGGAGTCC GTGCTCGAGGTCGTGGCCCTGGGAGGATGGGCCAACAAGGCGGCGGCCAT CGCCGCCGCCGCCACCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCGGCCA TCCTTCGCGCCCGGTCTGGCCACGAGCATGGGAGCAGCAGTAGTGATGCT ACTAGCGGCAGCAGCGGCGACGGCGGCGGGTGGGGTGCCGCTGCTGCTGC TGCTGCTGTGGTGTCGAGCTTGGGCTTGTCTAGGCCGGCGGACTCGTCGT CGTCGTCGTCGTCGTCGCTCGGCTGGTTGTACGCGCTGTGCGCGGCGGCG GGGCTGGTCACGGCCGCCTCGGTGTCCCTGGCGGTGGCGGTGGCGAGGAT CAAGGCCCGGAAGAGCCGGGGCGGGCTCGTGGCCGACTTCTTGAAGGGCG ACGAGGACGCAGAGACGTACTGCGTACGACTATCCAAGGTGGGTAGGATG GGGAAGGGGGTGCCGAAGTGGCGTTGATAGCTACTGGGGCGGGGGATTTA CTGTGGGGTTCATGTAGTACATCAGTTATCTCACATTTGCATGTTGCTGT CTTGACGCTTACTCATAGACGCAGTAGGTGTGGGTGACGATCCCGTCGCT GCCGAATGGCGGATCCAAACAAGCGCTTGCGAAACAAACTTTTAGGAGCG ACGGCGATTCGCCGGGTTCAACCTCGTGCTCTCGGATCCGAGCGGCGCTT GGCTGCTGAGCAACAGGGACGAGGCCGGGATAACCCGCCTTCCGCACGGC TTCTACGGGATCAGCAACGACACTCTCGACAAGCCTTGGGCAAAGGTTTG GATCATACTTCGAAGTATTTTTTGTTTTTTGCGCGTGTGTTCCCCCACGT TTTTTGGCTTTTGTTGGATGCCTCGAGCCGTCGTGGCGACGGGCTGGATA AAGAAACGCCCTTGCTGGCAACTTTCGTGGAACTCCATTCTCCCCCCGGA TTTTGTTGCCGGATGCTTGTGCTCGTAGTGAATACTCTCCGAAGTGCTGG ATGCCGCCGGCGTGCGGGCTTGTCCTCCGTCGTGATTCTTTCGGCATCAT CATGGCTACAGCAATACGTGGAACTCCACCATGGTGTTACCCTGCCGCTG ACGGCGTGTGGGGAACCGTAGGCCAGAGAGAGCAAGAGGAGATCGACCGA TTTTCCCCAGTGCCGAAGCTTTGCAGTCTATCGGCCTTTTTTGCGTGTGC ACGATCACCGCACGCAACGAACACAACAACAACAACAACAACAACAACAG CAACACCGACATCAACAACTGCAAGCAGATGATCTACGGCAAGTCTCGCG TGCTGCAAGTACTGCTCCGGATGACGGCGGACCCGACGCTAACGGAGGAA GACCTGGTGGACCTTCTCATGGACGTGCTTGCCGACGACACCCCAGGTGA GAACCCGACCGGGAAGAAGAAGCGTGAGGTTGAGTCCATCGCGTGCGTTC GAGCGCGCTTCCGAGACGACAGCGGCTCTGGCTTCGAGGTGTACGATGCT GATCGGGAACAGAGTCGTGCAGGAATGATGGGCAAGAAGATTGAAACCAG TCACGTGAAGGAACAAATACCCCCCCGACACACTGACCGACGCGATTGCC GTCCGTGTAAACCCTTCCGGGTGCCTGCGTGGTTGGTGGTAACGTGATAT GGTATGGTGGAGTTTTCCTCATGTTCGTGCGTGTATGCCACAAGCAAGCA TTGTCTGAAATGCGTTAAGCGCGTGTGACGCTTGAAGCGCGTGTGACGCT TGGCATTCGTTGCTTTCTGGGGCGGCGATGGAGTCTTGCGCCCACGAGGG ATTGCCCAAGGTGTCCTGATGTGTTAATAGTCGCGGCCCACCCTCGATGC GAGAGTAACCGAAACCCTCACGGTACTCGACGAGTTGTACCATGAAAAGG GTTGTGGCGTGCGTGCATACAGCATGGCCATATATAGGTACCTTACCCCC CCCCGGCAAAGTAGGAAGGGAAGATTGGCTATCGATGGTCGGTTCTGTGG GGACAAACAACGTTCATCCTCTCGAGGACGCCCTGTCGATGGTTTAACAG AGCTAAGGCATGTGAGACATGAAATTACACACCCTCCTCTCTGCACCAAA AAATCGCGTCCGTTCGTGAACCAACGAATGCCCGCGCTTGCGGGTACCCG GCCCTAAACCGAACAGTTCTCGCCGGGGATCCGTACCAGTACGTGTGCAT CCCCCCGATGGTCTGGGTCCCGAAGCTGAAGCTTCCCTGGGCGAAGTCCC CGTCGCCGCCACTAATGTACGGTACCCGGTCGTCGACGGTGGTGTTGGTG GACGCTGCCGGGAGGACGAGAGTCGTGGAGCGTAACCTCGGCTCGGTGGT GGGTGGTGCGGGCGAAGAGGGGAAGCGCAGCGGACAGAAGGGCACGGTCG CCGCTACTGCCGCCGGCGCCGGCGCCTCCGCGGAAGAAGCAAAGTTTTGT CGAATACGCGACGCTGATAGGACGTCTTTCGAGTTTTGTGATGTATGATT GTGGGACGCTGACCGCGCGTGTTTCGACTTATGACGCTGACCGCACCTCT CTGTAGCATGTTGTTTGTGTTTATCCATGGCCAAGTTTTTGGTCCCTGCG TTGTAGATAGATGGCTCGAACCATGAAGCATGCTTGGAAGCATGTCTGCT TGGCGAGATGGCAAGTAGAGACGGTGCTCGAAGTCGCCGAGGAATAACAG ACACTCGAGACACCATCCATGTAGATTTGTTTGTTTGCTTTATTCTTCTT GGAGAACCTGCTTCTTTTAGGTCTTGTTCCGAATGGTGTTTTGAGCAAAT CGAATGAATGCTGGCCTTGCTGGCCTTTTTTTTTCAGTTTGATGAAAATC GTGTGTCTGTGGGTTTCCGAGAGCAAATGTACCTCCGATGATGATGTGAC CCGCACATTTGCTCTTTGATTTCGCTGCGCTTGGTTCTACTACGTTCGCT GCTTAACCTCATCCATATGTTGCGCACGTAAATGAGACGGCATCCTAGAA AGTAGTGGTTTGGTGTTGAAGTAGCGAAGGAGAGTGGTTGGGTACCACCA TGCCAATCGGTGTTGGTGACGTTGACAAGTATCCCAGGTCACGATGCATG GCGGAGTCTGAGGAATAGCCCCATCTCGAAGACGTGGGCCACAATTTTCA GAATTTGGAGCCTGACGGTTTCTCCCGTTTGTTTTAATAAGATGTTTATA GTTCACCGGTGCCCATCAAGAAGTGAGAATGGTGTTTTTGCGCAGAGGGA AGTGCTTGAGATCCTTCGTTGGTTCAGTTTTGTTTGTTTCGAGGAAACTT ATGCCGAGTGTGCCTGTCCAGAATCAGCCAGCCCTTCGCGATCGGAATAT GGCTGTTTGGCGCATCGCCACGATGATCCGGAATATTCAAAGGTGTGTTT CATATTTCATCAAGCACTACATAACAGACGAAAAAGGC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig124:26961..32248+

>mRNA_Ecto-sp13_S_contig124.1991.1 ID=mRNA_Ecto-sp13_S_contig124.1991.1|Name=mRNA_Ecto-sp13_S_contig124.1991.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1368bp|location=Sequence derived from alignment at Ecto-sp13_S_contig124:26961..32248+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTGTATATTGTTCCTCTATCACGCTCTCGGCAAAGAGGCGGGCCACGA
TGATGATGCCCCCCCCCTCGCGTCGATGGACTTCTCGGCGGCGGGGAAGG
CCGCGGCAGGCAACGGTGAAGGCCGCGGGATTCGCGGCCGCTACAAGCTG
ATCGTCGCCTCCAACAGGGACGAAGACCTCGGCCGACCGACGGCCCCCAT
TCACTTCTGGAAGGACGCGGGCTCGAACTTGCTGGCAGGTCGCGATCTGG
TCGCAGGTGGGACGTGGCTGGGCGTGAGCCGCTCCGGAAAGTTCGCCACC
CTGACTAACGTCTCCTCGACCTGGGAGTCCGTGCTCGAGGTCGTGGCCCT
GGGAGGATGGGCCAACAAGGCGGCGGCCATCGCCGCCGCCGCCACCGCCG
CCGCCGCCGCCGCCGCCGCCGCCGCGGCCATCCTTCGCGCCCGGTCTGGC
CACGAGCATGGGAGCAGCAGTAGTGATGCTACTAGCGGCAGCAGCGGCGA
CGGCGGCGGGTGGGGTGCCGCTGCTGCTGCTGCTGCTGTGGTGTCGAGCT
TGGGCTTGTCTAGGCCGGCGGACTCGTCGTCGTCGTCGTCGTCGTCGCTC
GGCTGGTTGTACGCGCTGTGCGCGGCGGCGGGGCTGGTCACGGCCGCCTC
GGTGTCCCTGGCGGTGGCGGTGGCGAGGATCAAGGCCCGGAAGAGCCGGG
GCGGGCTCGTGGCCGACTTCTTGAAGGGCGACGAGGACGCAGAGACGTAC
TGCGTACGACTATCCAAGGAGCGACGGCGATTCGCCGGGTTCAACCTCGT
GCTCTCGGATCCGAGCGGCGCTTGGCTGCTGAGCAACAGGGACGAGGCCG
GGATAACCCGCCTTCCGCACGGCTTCTACGGGATCAGCAACGACACTCTC
GACAAGCCTTGGGCAAAGATGATCTACGGCAAGTCTCGCGTGCTGCAAGT
ACTGCTCCGGATGACGGCGGACCCGACGCTAACGGAGGAAGACCTGGTGG
ACCTTCTCATGGACGTGCTTGCCGACGACACCCCAGTTCTCGCCGGGGAT
CCGTACCAGTACGTGTGCATCCCCCCGATGGTCTGGGTCCCGAAGCTGAA
GCTTCCCTGGGCGAAGTCCCCGTCGCCGCCACTAATGTACGGTACCCGGT
CGTCGACGGTGGTGTTGGTGGACGCTGCCGGGAGGACGAGAGTCGTGGAG
CGTAACCTCGGCTCGGTGGTGGGTGGTGCGGGCGAAGAGGGGAAGCGCAG
CGGACAGAAGGGCACGGTCGCCGCTACTGCCGCCGGCGCCGGCGCCTCCG
CGGAAGAAGCAAAGTTTTGTCGAATACGCGACGCTGATAGGACGTCTTTC
GAGTTTTGTGATGTATGA
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