prot_Ecto-sp13_S_contig8506.19907.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8506.19907.1
Unique Nameprot_Ecto-sp13_S_contig8506.19907.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length79
Homology
BLAST of mRNA_Ecto-sp13_S_contig8506.19907.1 vs. uniprot
Match: D7FQV4_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQV4_ECTSI)

HSP 1 Score: 90.9 bits (224), Expect = 1.450e-19
Identity = 47/74 (63.51%), Postives = 49/74 (66.22%), Query Frame = 0
Query:    5 PKNAETRFSSNGLEGIDGNGVVYRALECGACGGLDCGTSGREFGLGSESCCGEGIIDSGIMCSDSREAPCIQGA 78
            P   ET   SNGLEGIDGNGVV   LEC  CGG  C TSG   GLGSESCCG GI  SG  C D+ EAPCI G+
Sbjct:  539 PTTVET--CSNGLEGIDGNGVVCCPLECNQCGGTGCTTSGSAAGLGSESCCGGGIKASGAYCDDTNEAPCIIGS 610          
BLAST of mRNA_Ecto-sp13_S_contig8506.19907.1 vs. uniprot
Match: A0A6H5JGP9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGP9_9PHAE)

HSP 1 Score: 84.0 bits (206), Expect = 2.300e-18
Identity = 38/65 (58.46%), Postives = 46/65 (70.77%), Query Frame = 0
Query:   14 SNGLEGIDGNGVVYRALECGACGGLDCGTSGREFGLGSESCCGEGIIDSGIMCSDSREAPCIQGA 78
            ++G+EGIDGNGVV   LECG C G  C   G +FGLGSESCCG G+ D+G  C  + EAPCI G+
Sbjct:   49 NDGIEGIDGNGVVCCPLECGQCAGTGCTNFGADFGLGSESCCGGGVKDAGNYCDVTGEAPCIYGS 113          
BLAST of mRNA_Ecto-sp13_S_contig8506.19907.1 vs. uniprot
Match: D7G651_ECTSI (Mannuronan C-5-epimerase C-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G651_ECTSI)

HSP 1 Score: 87.0 bits (214), Expect = 3.310e-18
Identity = 40/70 (57.14%), Postives = 48/70 (68.57%), Query Frame = 0
Query:    9 ETRFSSNGLEGIDGNGVVYRALECGACGGLDCGTSGREFGLGSESCCGEGIIDSGIMCSDSREAPCIQGA 78
            ET+  S+G EGIDGNGVV   + CG C G  CGT+G   GLGSESCCG G+   G+ C D+ EAPCI G+
Sbjct:  500 ETQTCSDGTEGIDGNGVVCCPIGCGQCAGDGCGTAGSANGLGSESCCGNGVKSLGLYCDDTNEAPCIIGS 569          
BLAST of mRNA_Ecto-sp13_S_contig8506.19907.1 vs. uniprot
Match: A0A6H5JC43_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC43_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 1.200e-17
Identity = 44/78 (56.41%), Postives = 49/78 (62.82%), Query Frame = 0
Query:    1 PTPPPKNAETRFSSNGLEGIDGNGVVYRALECGACGGLDCGTSGREFGLGSESCCGEGIIDSGIMCSDSREAPCIQGA 78
            PTP P +A T   SNGLEGIDGNGVV   L CG CGG  C TSG   GL   SCCG  I  SG  C ++ +APCI G+
Sbjct:  260 PTPSPTSANT--CSNGLEGIDGNGVVCCPLGCGQCGGTGCNTSGAAAGLDGSSCCGGSIKASGKYCDETNDAPCIIGS 335          
BLAST of mRNA_Ecto-sp13_S_contig8506.19907.1 vs. uniprot
Match: D7G8L8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8L8_ECTSI)

HSP 1 Score: 82.4 bits (202), Expect = 1.680e-17
Identity = 37/65 (56.92%), Postives = 46/65 (70.77%), Query Frame = 0
Query:   14 SNGLEGIDGNGVVYRALECGACGGLDCGTSGREFGLGSESCCGEGIIDSGIMCSDSREAPCIQGA 78
            +NG+EGIDGNGVV   L+CG CGG  C  SG +FGLGSESCCG G+  +   C  + +APCI G+
Sbjct:   96 NNGIEGIDGNGVVCCPLDCGQCGGEGCSGSGADFGLGSESCCGGGVKSANNYCDVTGKAPCIYGS 160          
BLAST of mRNA_Ecto-sp13_S_contig8506.19907.1 vs. uniprot
Match: D7FUJ9_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUJ9_ECTSI)

HSP 1 Score: 83.6 bits (205), Expect = 5.400e-17
Identity = 38/72 (52.78%), Postives = 48/72 (66.67%), Query Frame = 0
Query:    7 NAETRFSSNGLEGIDGNGVVYRALECGACGGLDCGTSGREFGLGSESCCGEGIIDSGIMCSDSREAPCIQGA 78
            +A     SNG++GIDGNG+V   +EC  CGG  C  +GR  GLG+ESCCG G+  SG  C D+ EAPCI G+
Sbjct:  521 SASVTTCSNGVQGIDGNGIVCCPMECNQCGGSGCTHAGRAAGLGAESCCGSGVKASGRYCDDTDEAPCIIGS 592          
BLAST of mRNA_Ecto-sp13_S_contig8506.19907.1 vs. uniprot
Match: D7FIC5_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIC5_ECTSI)

HSP 1 Score: 80.5 bits (197), Expect = 6.400e-16
Identity = 40/69 (57.97%), Postives = 44/69 (63.77%), Query Frame = 0
Query:   10 TRFSSNGLEGIDGNGVVYRALECGACGGLDCGTSGREFGLGSESCCGEGIIDSGIMCSDSREAPCIQGA 78
            T   SNGLEGIDGNGVV   L CG CGG  C TSG   GL  +SCCG GI  S   C ++ EAPCI G+
Sbjct:  445 TETCSNGLEGIDGNGVVCCPLACGQCGGKGCYTSGSANGLSGDSCCGGGIKASDEYCDETNEAPCIIGS 513          
BLAST of mRNA_Ecto-sp13_S_contig8506.19907.1 vs. uniprot
Match: A0A6H5K5M2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5M2_9PHAE)

HSP 1 Score: 74.7 bits (182), Expect = 1.240e-14
Identity = 37/65 (56.92%), Postives = 42/65 (64.62%), Query Frame = 0
Query:   14 SNGLEGIDGNGVVYRALECGACGGLDCGTSGREFGLGSESCCGEGIIDSGIMCSDSREAPCIQGA 78
            S+G+EGIDGNGVV   L CG C G  C T+G   GL S SCCG  I DSG  C D+  APCI G+
Sbjct:    4 SDGIEGIDGNGVVCCPLGCGQCVGTGCSTAGAANGLSSGSCCGGEIKDSGNYCDDTGVAPCIYGS 68          
BLAST of mRNA_Ecto-sp13_S_contig8506.19907.1 vs. uniprot
Match: A0A6H5JYT7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYT7_9PHAE)

HSP 1 Score: 76.6 bits (187), Expect = 1.500e-14
Identity = 37/65 (56.92%), Postives = 42/65 (64.62%), Query Frame = 0
Query:   14 SNGLEGIDGNGVVYRALECGACGGLDCGTSGREFGLGSESCCGEGIIDSGIMCSDSREAPCIQGA 78
            S+G+EGIDGNGVV   L CG C G  CG +G   GL S SCCG GI  SG  C D+  APCI G+
Sbjct:  650 SDGIEGIDGNGVVCCPLGCGQCAGSGCGAAGAANGLTSSSCCGGGIKSSGNYCDDTGVAPCIYGS 714          
BLAST of mRNA_Ecto-sp13_S_contig8506.19907.1 vs. uniprot
Match: A0A6H5L8H5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8H5_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 2.040e-14
Identity = 37/65 (56.92%), Postives = 42/65 (64.62%), Query Frame = 0
Query:   14 SNGLEGIDGNGVVYRALECGACGGLDCGTSGREFGLGSESCCGEGIIDSGIMCSDSREAPCIQGA 78
            S+G+EGIDGNGVV   L CG C G  C T+G   GL S SCCG GI  SG  C D+  APCI G+
Sbjct:  536 SDGIEGIDGNGVVCCPLGCGQCAGSGCSTAGAANGLTSSSCCGGGIKSSGNYCDDTGVAPCIYGS 600          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8506.19907.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D7FQV4_ECTSI1.450e-1963.51Unsaturated glucuronyl hydrolase, family GH88 n=1 ... [more]
A0A6H5JGP9_9PHAE2.300e-1858.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G651_ECTSI3.310e-1857.14Mannuronan C-5-epimerase C-terminal n=1 Tax=Ectoca... [more]
A0A6H5JC43_9PHAE1.200e-1756.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G8L8_ECTSI1.680e-1756.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FUJ9_ECTSI5.400e-1752.78Unsaturated glucuronyl hydrolase, family GH88 n=3 ... [more]
D7FIC5_ECTSI6.400e-1657.97Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5K5M2_9PHAE1.240e-1456.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JYT7_9PHAE1.500e-1456.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L8H5_9PHAE2.040e-1456.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8506contigEcto-sp13_S_contig8506:2240..2476 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8506.19907.1mRNA_Ecto-sp13_S_contig8506.19907.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8506 2240..2709 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8506.19907.1 ID=prot_Ecto-sp13_S_contig8506.19907.1|Name=mRNA_Ecto-sp13_S_contig8506.19907.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=79bp
PTPPPKNAETRFSSNGLEGIDGNGVVYRALECGACGGLDCGTSGREFGLG
SESCCGEGIIDSGIMCSDSREAPCIQGA*
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