mRNA_Ecto-sp13_S_contig8503.19904.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8503.19904.1 vs. uniprot
Match: D7FS04_ECTSI (Triose phosphate/phosphate translocator, non-green plastid, chloroplast, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS04_ECTSI) HSP 1 Score: 590 bits (1522), Expect = 2.660e-209 Identity = 339/376 (90.16%), Postives = 347/376 (92.29%), Query Frame = 1
Query: 19 RKDLVVLVPMGFLHAVSHLTVVLGLGAGAVSFLQTVKAAEACFTALLSYLFLGQTMPLPVYLTLLPVVAGVALTCCGQGLRFSWLALLSALVSNLTNAMRNVLIVKNIGPAAAAAAAGRGRNSLKTEVSPRGSSGSSSFLRPTAAKTATDPSFLSNPVARSASALANTRAGGEATTRRSRESGLASLARGDTYRLLTVVGAALIIPAAAFMERDSWPRLWRAAMDATAALIGRTISADGSPPLLGEALLSAVGSVGDSSAAGG-RVSAVAEAAVEAAARGQWAEAFRRAVLAGVSFNLFYDLTFRLLGQLHPVTHAVGNTIKRIVVIAAGAFAFGGDLGGTRGVMGSALAVIGVLGYSLSKARCNTTATTGSRCNG 1143
R+DL VLVPMGFLHAVSHLTVVLGLGAGAVSFLQTVKAAEACFTALLSYLFLGQTMPLPVYLTLLPVVAGVALTCCGQGLRFSW+ LLSALVS+L NAM NVLIVKNIGPAAAAA GR R+SLKTE SP SS S+SFLRPTAA TA DPSFLSNPVARSASALANTRAGGEATTRR RESGLASLARGDTYRLLTVVGAALIIPAAA+MERDSWPRLWRAAMDATAAL+GRT SADGSPPLLGEALLSA GS GDS RVSAVAEAAVEAAARGQWAEAFRRAVLAGVSFNLFYDLTFRLLGQLHPVTHAVGNTIKRIVVIAAGAFAFGGDLGG RGV+GSALAVIGVLGYSLSKARC TT TGS C G
Sbjct: 77 RQDLAVLVPMGFLHAVSHLTVVLGLGAGAVSFLQTVKAAEACFTALLSYLFLGQTMPLPVYLTLLPVVAGVALTCCGQGLRFSWVGLLSALVSHLPNAMGNVLIVKNIGPAAAAA--GRRRSSLKTEASPPRSS-SASFLRPTAANTAADPSFLSNPVARSASALANTRAGGEATTRRRRESGLASLARGDTYRLLTVVGAALIIPAAAYMERDSWPRLWRAAMDATAALVGRTTSADGSPPLLGEALLSAAGSGGDSXXXXXXRVSAVAEAAVEAAARGQWAEAFRRAVLAGVSFNLFYDLTFRLLGQLHPVTHAVGNTIKRIVVIAAGAFAFGGDLGGARGVLGSALAVIGVLGYSLSKARCKTT--TGSGCTG 447
BLAST of mRNA_Ecto-sp13_S_contig8503.19904.1 vs. uniprot
Match: A0A6H5KHZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHZ8_9PHAE) HSP 1 Score: 529 bits (1363), Expect = 3.700e-184 Identity = 308/375 (82.13%), Postives = 315/375 (84.00%), Query Frame = 1
Query: 19 RKDLVVLVPMGFLHAVSHLTVVLGLGAGAVSFLQTVKAAEACFTALLSYLFLGQTMPLPVYLTLLPVVAGVALTCCGQGLRFSWLALLSALVSNLTNAMRNVLIVKNIGPAAAAAAAGRGRNSLKTEVSPRGSSGSSSFLRPTAAKTATDPSFLSNPVARSASALANTRAGGEATTRRSRESGLASLARGDTYRLLTVVGAALIIPAAAFMERDSWPRLWRAAMDATAALIGRTISADGSPPLLGEALLSAVGSVGDSSAAGGRVSAVAEAAVEAAARGQWAEAFRRAVLAGVSFNLFYDLTFRLLGQLHPVTHAVGNTIKRIVVIAAGAFAFGGDLGGTRGVMGSALAVIGVLGYSLSKARCNTTATTGSRCNG 1143
R+DL VLVPMGFLHAVSHLTVVLGLGAGAVSFLQTVKAAEACFTALLSYLFLGQTMPLPVYLTLLPVVAGVALTCCGQGLRFS L+TEVS SSGSS FLRPTAA TA DPSFLSNPVARSASALANTRAGGEATT+RSRESGLASLARGDTYRLLTVVGAALIIPAAA+MERDSWPRLWRAAMDATAAL+GR SADG PPL GEALLSAVGSV DSSAAGGRVSAVAEAAV RGQWAEAFRRAVLAGVSFNLFYDLTFRLLGQLHPVTHAVGNTIKRIVVIAAGAFAFGGDLGG RGVMGSALAVIGVLGY+LSKARCNTT TT +RC G
Sbjct: 182 RQDLAVLVPMGFLHAVSHLTVVLGLGAGAVSFLQTVKAAEACFTALLSYLFLGQTMPLPVYLTLLPVVAGVALTCCGQGLRFS----------------------------------------LETEVSSPRSSGSS-FLRPTAANTAGDPSFLSNPVARSASALANTRAGGEATTQRSRESGLASLARGDTYRLLTVVGAALIIPAAAYMERDSWPRLWRAAMDATAALVGRRTSADGLPPLPGEALLSAVGSVEDSSAAGGRVSAVAEAAV----RGQWAEAFRRAVLAGVSFNLFYDLTFRLLGQLHPVTHAVGNTIKRIVVIAAGAFAFGGDLGGARGVMGSALAVIGVLGYNLSKARCNTTTTTRTRCTG 511
BLAST of mRNA_Ecto-sp13_S_contig8503.19904.1 vs. uniprot
Match: A0A836CHH7_9STRA (Plastidic triose-phosphate/phosphate translocator n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHH7_9STRA) HSP 1 Score: 125 bits (314), Expect = 7.380e-29 Identity = 104/359 (28.97%), Postives = 158/359 (44.01%), Query Frame = 1
Query: 25 DLVVLVPMGFLHAVSHLTVVLGLGAGAVSFLQTVKAAEACFTALLSYLFLGQTMPLPVYLTLLPVVAGVALTCCGQGLRFSWLALLSALVSNLTNAMRNVLIVKNIGPAAAAAAAGRGRNSLKTEVSPRGSSGSSSFLRPTAAKTATDPSFLSNPVARSASALANTRAGGEATTRRSRESGLASLARGDTYRLLTVVGAALIIPAAAFMERDSWPRLWRAAMDATAALIGRTISADGSPPLLGEALLSAVGSVGDSSAAGGRVSAVAEAAVEAAARGQWAEAF-RRAVLAGVSFNLFYDLTFRLLGQLHPVTHAVGNTIKRIVVIAAGAFAFGGDLGGTRGVMGSALAVIGVLGYSLSK 1098
++ L P+G HA+SHL+ V+GLGAG+VSF VKAAE FTAL S +FL Q P+PVYL+L+PVVAGVAL + L FSW AL A+ SN+ + R +L +++G P+G+ ++ + Y +LT++ A+++P A +E + W AA+ +G +A + A+L+G+ F L+ ++ F L +HPV HAVGNT+KR+ +IA+G FG + G++GS+LA++GVL +SL K
Sbjct: 146 NIKTLSPIGLCHAISHLSAVIGLGAGSVSFTHIVKAAEPFFTALFSAIFLKQYFPVPVYLSLVPVVAGVALASLKE-LNFSWTALCGAMGSNVAASSRAILAKRSMGR-------------------PKGT----------------------------------------------------NMGAANLYGVLTILATAMLVPVAGVLEGPKFSAKWDAAL----------------------------------------------------LKGYSQDAITKHALLSGLYFYLYNEVAFLALDAVHPVVHAVGNTLKRVFIIASGVILFGNKIT-PLGMVGSSLAIVGVLIFSLVK 379
BLAST of mRNA_Ecto-sp13_S_contig8503.19904.1 vs. uniprot
Match: A0A7R9YBK2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBK2_9STRA) HSP 1 Score: 120 bits (302), Expect = 3.440e-27 Identity = 108/360 (30.00%), Postives = 156/360 (43.33%), Query Frame = 1
Query: 19 RKDLVVLVPMGFLHAVSHLTVVLGLGAGAVSFLQTVKAAEACFTALLSYLFLGQTMPLPVYLTLLPVVAGVALTCCGQGLRFSWLALLSALVSNLTNAMRNVLIVKNIGPAAAAAAAGRGRNSLKTEVSPRGSSGSSSFLRPTAAKTATDPSFLSNPVARSASALANTRAGGEATTRRSRESGLASLARGDTYRLLTVVGAALIIPAAAFMERDSWPRLWRAAMDATAALIGRTISADGSPPLLGEALLSAVGSVGDSSAAGGRVSAVAEAAVEAAARGQWAEAFRRAVLAGVSFNLFYDLTFRLLGQLHPVTHAVGNTIKRIVVIAAGAFAFGGDLGGTRGVMGSALAVIGVLGYSLSK 1098
R++L L P+ LH +HLT VL LGAGAVSF VKAAE F+AL + + +GQ PVYLTL+PV+AGVA+ + L FSW++ +A+ SN +A+R + KN+G +P+G + +S+ L Y +LT G AL+ P A +E W AA ++A GS LL W A+L+G+ + + ++ F L Q+HP+THAVGNTIKR+VVI A FG + T + GS++A++G L Y+L+K
Sbjct: 142 RENLKNLFPLASLHTGAHLTAVLSLGAGAVSFTHIVKAAEPAFSALFAAVLMGQVFAAPVYLTLIPVIAGVAVASMKE-LAFSWVSFGNAMGSNTFSALRGIYAKKNMG-------------------NPQGENMNSANL----------------------------------------------------YAVLTCFGIALLTPIALILEGGKMGAAWTAA-----------VAAYGSQQLL-----------------------------------LW-----HALLSGLYYYSYNEVAFLALSQVHPITHAVGNTIKRVVVIIASVIVFGTTMTPTA-IAGSSVAILGTLMYALAK 377
BLAST of mRNA_Ecto-sp13_S_contig8503.19904.1 vs. uniprot
Match: A0A835ZDI5_9STRA (Triose-phosphate transporter family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDI5_9STRA) HSP 1 Score: 114 bits (286), Expect = 4.450e-25 Identity = 105/360 (29.17%), Postives = 146/360 (40.56%), Query Frame = 1
Query: 19 RKDLVVLVPMGFLHAVSHLTVVLGLGAGAVSFLQTVKAAEACFTALLSYLFLGQTMPLPVYLTLLPVVAGVALTCCGQGLRFSWLALLSALVSNLTNAMRNVLIVKNIGPAAAAAAAGRGRNSLKTEVSPRGSSGSSSFLRPTAAKTATDPSFLSNPVARSASALANTRAGGEATTRRSRESGLASLARGDTYRLLTVVGAALIIPAAAFMERDSWPRLWRAAMDATAALIGRTISADGSPPLLGEALLSAVGSVGDSSAAGGRVSAVAEAAVEAAARGQWAEAFRRAVLAGVSFNLFYDLTFRLLGQLHPVTHAVGNTIKRIVVIAAGAFAFGGDLGGTRGVMGSALAVIGVLGYSLSK 1098
+ +L + P+ LH SH++ V+GLGAGAV F+ VKA E FTA LS L L + MPLPVY +LLPVV GVAL + L FSW+A A+ SN+ A R VL K +G A ++ G+ Y ++T++ AA++ PAA +E +W AA A G T +R W R +L+G+ F L+ ++ F L + THAVGNT+KR+V++ FG L G GSA+A+ GVL YSL+K
Sbjct: 80 KANLKTVFPLAALHTTSHISAVIGLGAGAVGFVHVVKALEPLFTAALSALLLQKFMPLPVYASLLPVVGGVALASMKE-LSFSWVAFAGAMGSNVAAATRGVLAKKQMGQVQAP-----------------------------------------------------------------------NMDPGNLYGVMTLIAAAILFPAALVVEGPRIKAVWAAAQAA-----GHT------------------------------------------SRAIW----RGMILSGLYFYLYNEVAFYCLNSIDATTHAVGNTVKRVVLLGVSVLVFGHQLT-PLGATGSAVAIGGVLVYSLTK 315
BLAST of mRNA_Ecto-sp13_S_contig8503.19904.1 vs. uniprot
Match: I2CS06_NANGC (Plastidic triose-phosphate phosphate translocator (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CS06_NANGC) HSP 1 Score: 114 bits (284), Expect = 1.840e-24 Identity = 102/365 (27.95%), Postives = 150/365 (41.10%), Query Frame = 1
Query: 13 PERKDLVVLVPMGFLHAVSHLTVVLGLGAGAVSFLQTVKAAEACFTALLSYLFLGQTMPLPVYLTLLPVVAGVALTCCGQGLRFSWLALLSALVSNLTNAMRNVLIVKNIGPAAAAAAAGRGRNSLKTEVSPRGSSGSSSFLRPTAAKTATDPSFLSNPVARSASALANTRAGGEATTRRSRESGLASLARGDTYRLLTVVGAALIIPAAAFMERDSWPRLWRAAMDATAALIGRTISADGSPPLLGEALLSAVGSVGDSSAAGGRVSAVAEAAVEAAARGQWAEAFRRAVLAGVSFNLFYDLTFRLLGQLHPVTHAVGNTIKRIVVIAAGAFAFGGDLGGTRGVMGSALAVIGVLGYSLSKARC 1107
PERK L +L GFLHAVSH+T + LGAGAVSF VK+AE F+A+ + + Q LPVYL L+PVV+GVA + L F+WL+ A+ SN+ A R V++ +G +PT ++ +L + Y +LT++ L++P +E W+AA + G T E + +G++F L+ ++ F L LHP++HAV NTIKR+V+I F F + T+ ++GS+ AVIGVL YSL+K C
Sbjct: 182 PERKTLSIL---GFLHAVSHITAITSLGAGAVSFTHIVKSAEPFFSAIFAGIVFKQFFSLPVYLALVPVVSGVAYASMKE-LTFTWLSFWCAMASNVVCAARGVVVKGMMGG------------------------------KPTQSE---------------------------------------NLTSSNLYSVLTILATLLLLPFGLLIEGPGLTAAWKAATAHPSLTNGGT------------------------------------------------ELATYLIYSGLTFFLYNEVAFAALESLHPISHAVANTIKRVVIIVVSVFVFRNPMS-TQSIIGSSTAVIGVLMYSLAKHYC 424
BLAST of mRNA_Ecto-sp13_S_contig8503.19904.1 vs. uniprot
Match: A0A6H5KC08_9PHAE (TPT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC08_9PHAE) HSP 1 Score: 112 bits (279), Expect = 6.250e-24 Identity = 108/357 (30.25%), Postives = 146/357 (40.90%), Query Frame = 1
Query: 37 LVPMGFLHAVSHLTVVLGLGAGAVSFLQTVKAAEACFTALLSYLFLGQTMPLPVYLTLLPVVAGVALTCCGQGLRFSWLALLSALVSNLTNAMRNVLIVKNIGPAAAAAAAGRGRNSLKTEVSPRGSSGSSSFLRPTAAKTATDPSFLSNPVARSASALANTRAGGEATTRRSRESGLASLARGDTYRLLTVVGAALIIPAAAFMERDSWPRLWRAAMDATAALIGRTISADGSPPLLGEALLSAVGSVGDSSAAGGRVSAVAEAAVEAAARGQWAEAFRRAVLAGVSFNLFYDLTFRLLGQLHPVTHAVGNTIKRIVVIAAGAFAFGGDLGGTRGVMGSALAVIGVLGYSLSKARC 1107
L P+ H +SH+ V+GLGAGAVSF+ VKAAE FTAL S +FLGQ VYLTL+PVVAGVAL + L F W AL A+ SNL + R +L +++G G+N +SP + Y +LT++ +A+++P +A +E LW E+ V +G E V +GV F L+ ++ FR LG +HPVTHAVGNT KR+ +IA F L MGS +A+ GVL YSL+K C
Sbjct: 152 LSPIAACHMLSHVCAVIGLGAGAVSFVHIVKAAEPLFTALFSAIFLGQIFSPLVYLTLVPVVAGVALASLKE-LDFKWAALGGAMGSNLAASTRAILSKRSMGM-------DMGKN-----MSPA-----------------------------------------------------------NLYAVLTIMASAMLLPLSAIVEGPKIQELW-------------------------------------------------ESTVTTPEKGN--EIIYNTVASGVFFYLYNEVAFRCLGVVHPVTHAVGNTFKRVFLIATSIIVFKSKLT-PLAAMGSFMAIAGVLLYSLTKEWC 384
BLAST of mRNA_Ecto-sp13_S_contig8503.19904.1 vs. uniprot
Match: A0A835YPU6_9STRA (Triosephosphate/phosphate translocator n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPU6_9STRA) HSP 1 Score: 107 bits (268), Expect = 3.590e-23 Identity = 108/368 (29.35%), Postives = 149/368 (40.49%), Query Frame = 1
Query: 16 ERKDLVVLVPMGFLHAVSHLTVVLGLGAGAVSFLQTVKAAEACFTALLSYLFLGQTMPLPVYLTLLPVVAGVALTCCGQGLRFSWLALLSALVSNLTNAMRNVLIVKNIGPAAAAAAAGRGRNSLKTEVSPRGSSGSSSFLRPTAAKTATDPSFLSNPVARSASALANTRAGGEATTRRSRESGLASLARGDTYRLLTVVGAALIIPAAAFMERDSWPRLWRAAMDATAALIGRTISADGSPPLLGEALLSAVGSVGDSSAAGGRVSAVAEAAVEAAARGQWAEAFRRAVLAGVSFNLFYDLTFRLLGQLHPVTHAVGNTIKRIVVIAAGAFAFGGDLGGTRGVMGSALAVIGVLGYSLSKARCNTTA 1119
+R L + P+ H +HL V+ LGAGAV F+Q VKAAE FTA LS LGQ + PVYLTLLPVVAGVA+ Q L FS AL +A+ SN A R+V+ + +G +G N + G+ Y ++T++ ++ P A +E LW AA ++A SP GR+ +R L+GV F L+ ++ F L +HP+TH +GNTIKR+V+IA AF GV+GSA A+ GVL YS+ K + A
Sbjct: 28 KRAHLATVFPVAMAHCFAHLAAVVSLGAGAVGFVQIVKAAEPLFTAALSAALLGQVLAWPVYLTLLPVVAGVAVASL-QELSFSATALAAAMCSNTFAATRSVIGKRAMGR-------DKGEN----------------------------------------------------------------MDAGNLYAVMTMMATCVLTPLALVLEGPKLRGLWAAA-----------VAAGASP---------------------GRL-------------------WRDIALSGVFFYLYNEVAFYCLNAIHPLTHGIGNTIKRVVMIAVSVIAFHHRFT-PLGVVGSATAIGGVLLYSIVKGHYDEEA 271
BLAST of mRNA_Ecto-sp13_S_contig8503.19904.1 vs. uniprot
Match: A0A0M0J3T4_9EUKA (Plastidic triose-phosphate phosphate translocator n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J3T4_9EUKA) HSP 1 Score: 107 bits (266), Expect = 1.750e-22 Identity = 95/360 (26.39%), Postives = 154/360 (42.78%), Query Frame = 1
Query: 25 DLVVLVPMGFLHAVSHLTVVLGLGAGAVSFLQTVKAAEACFTALLSYLFLGQTMPLPVYLTLLPVVAGVALTCCGQGLRFSWLALLSALVSNLTNAMRNVLIVKNIGPAAAAAAAGRGRNSLKTEVSPRGSSGSSSFLRPTAAKTATDPSFLSNPVARSASALANTRAGGEATTRRSRESGLASLARGDTYRLLTVVGAALIIPAAAFMERDSWPRLWRAAMDATAALIGRTISADGSPPLLGEALLSAVGSVGDSSAAGGRVSAVAEAAVEAAARGQWAEAFRRAVLAGVSFNLFYDLTFRLLGQLHPVTHAVGNTIKRIVVIAAGAFAFGGDLGGTRGVMGSALAVIGVLGYSLSKAR 1104
++ L+P+ H +H+ V+ LGAGAVSF +KA+E +A+LS+L LG YLTLLPVV GVAL + L F+W+ ++A+ SNL++A+R +L K +G G G N + + Y +LT++ I+P + +E + A +A I + ++ +P L W ++ +LAG + L+ ++ F LG+++PVTHAVGNT+KR+V+I A AF + T+G++GS +A++G L YS+SK +
Sbjct: 102 NVKTLIPVSLGHLGTHIGAVVSLGAGAVSFTHIIKASEPVVSAILSFLLLGAVSSWQTYLTLLPVVGGVALASLKE-LSFTWVGFIAAMGSNLSSALRGILAKKTMG-------GGVGEN----------------------------------------------------------------MDEANLYAVLTILAFIAILPISLAIESPA----------AISACIAKATASGLTPTYL------------------------------------WTQS----LLAGAFYYLYNEVAFLALGRVNPVTHAVGNTVKRVVIIVASVIAFKTPIS-TQGIIGSTIAIVGTLLYSISKTK 338
BLAST of mRNA_Ecto-sp13_S_contig8503.19904.1 vs. uniprot
Match: A0A6H5KYA6_9PHAE (TPT domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYA6_9PHAE) HSP 1 Score: 105 bits (263), Expect = 1.130e-21 Identity = 101/361 (27.98%), Postives = 147/361 (40.72%), Query Frame = 1
Query: 22 KDLVVLVPMGFLHAVSHLTVVLGLGAGAVSFLQTVKAAEACFTALLSYLFLGQTMPLPVYLTLLPVVAGVALTCCGQGLRFSWLALLSALVSNLTNAMRNVLIVKNIGPAAAAAAAGRGRNSLKTEVSPRGSSGSSSFLRPTAAKTATDPSFLSNPVARSASALANTRAGGEATTRRSRESGLASLARGDTYRLLTVVGAALIIPAAAFMERDSWPRLWRAAMDATAALIGRTISADGSPPLLGEALLSAVGSVGDSSAAGGRVSAVAEAAVEAAARGQWAEAFRRAVLAGVSFNLFYDLTFRLLGQLHPVTHAVGNTIKRIVVIAAGAFAFGGDLGGTRGVMGSALAVIGVLGYSLSKAR 1104
++L ++P+ LH SH+ V+GL AGA+ F+Q VKA E FTAL S LFLGQ LPVY LLPVV GVA+ + L F+WLA A+ SN+ A R VL ++ P+G ++ G+ Y ++T++ ++ P A +E L+ TA G T + A+G A+L+G+ F ++ ++ F L +HPVTHAV NT+KR+ +IA FG L G +GSA+A+ GVL YSL+K +
Sbjct: 169 ENLKAVLPLAALHTTSHIAAVVGLSAGAIGFVQIVKAGEPLFTALFSALFLGQIFALPVYAALLPVVGGVAIASLKE-LSFTWLAFGGAMTSNVAAASRGVLAKASMDK-------------------PKGE----------------------------------------------------NMDAGNLYGVMTILATIMLAPFAWLVEGKQLQGLYD-----TAIAAGHT--------------------------------------KKTLAKG--------ALLSGIFFYMYNEVAFYCLDAIHPVTHAVANTVKRVFLIAVSILVFGHKLT-PLGSIGSAVAIAGVLLYSLAKQK 405 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8503.19904.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8503.19904.1 >prot_Ecto-sp13_S_contig8503.19904.1 ID=prot_Ecto-sp13_S_contig8503.19904.1|Name=mRNA_Ecto-sp13_S_contig8503.19904.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=382bp PPPPPERKDLVVLVPMGFLHAVSHLTVVLGLGAGAVSFLQTVKAAEACFTback to top mRNA from alignment at Ecto-sp13_S_contig8503:92..2335+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8503.19904.1 ID=mRNA_Ecto-sp13_S_contig8503.19904.1|Name=mRNA_Ecto-sp13_S_contig8503.19904.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2244bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8503:92..2335+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8503:92..2335+ >mRNA_Ecto-sp13_S_contig8503.19904.1 ID=mRNA_Ecto-sp13_S_contig8503.19904.1|Name=mRNA_Ecto-sp13_S_contig8503.19904.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1146bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8503:92..2335+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |