prot_Ecto-sp13_S_contig8502.19902.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8502.19902.1
Unique Nameprot_Ecto-sp13_S_contig8502.19902.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length210
Homology
BLAST of mRNA_Ecto-sp13_S_contig8502.19902.1 vs. uniprot
Match: D8LN12_ECTSI (Protein YIPF n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LN12_ECTSI)

HSP 1 Score: 391 bits (1004), Expect = 4.040e-137
Identity = 208/209 (99.52%), Postives = 208/209 (99.52%), Query Frame = 0
Query:    1 MAEAMAMAEFDGGIGMQTAERTPQSMMNTLDEPVSETIMRDLRSVGAKLKIVLNPRGDQDGVLTKLKDWDLWGPLMVCLTLSIVLSVSAPADQGALVFAAVFVVVWCGAALVTLNAQLLGGTISFFQSVCVLGYCVFPLLVSAVVCLILSLFNFMNVVVRVAVVLVGFVWATRASKVFISEIISDERKMLAVYPVFFFYTFISWMIVIH 209
            MAEAMAMAEFDGGIGMQTAERTPQSMMNTLDEPVSETIMRDLRSVGAKLKIVLNPRGDQDGVLTKLKDWDLWGPLMVCLTLSIVLSVSAPADQGALVFAAVFVVVWCGAALVTLNAQLLGGTISFFQSVCVLGYCVFPLLVSAVVCLILSLFNFMNV VRVAVVLVGFVWATRASKVFISEIISDERKMLAVYPVFFFYTFISWMIVIH
Sbjct:    1 MAEAMAMAEFDGGIGMQTAERTPQSMMNTLDEPVSETIMRDLRSVGAKLKIVLNPRGDQDGVLTKLKDWDLWGPLMVCLTLSIVLSVSAPADQGALVFAAVFVVVWCGAALVTLNAQLLGGTISFFQSVCVLGYCVFPLLVSAVVCLILSLFNFMNVFVRVAVVLVGFVWATRASKVFISEIISDERKMLAVYPVFFFYTFISWMIVIH 209          
BLAST of mRNA_Ecto-sp13_S_contig8502.19902.1 vs. uniprot
Match: A0A7S1UDR8_9STRA (Protein YIPF n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UDR8_9STRA)

HSP 1 Score: 263 bits (673), Expect = 5.830e-87
Identity = 136/191 (71.20%), Postives = 162/191 (84.82%), Query Frame = 0
Query:   19 AERTPQSMMNTLDEPVSETIMRDLRSVGAKLKIVLNPRGDQDGVLTKLKDWDLWGPLMVCLTLSIVLSVSAPADQGALVFAAVFVVVWCGAALVTLNAQLLGGTISFFQSVCVLGYCVFPLLVSAVVCLILSLFNFMNVVVRVAVVLVGFVWATRASKVFISEIISDERKMLAVYPVFFFYTFISWMIVIH 209
            A+    +M  TLDEPVSETIMRDLR V  KLK+VL PR DQ+GV+ KLKDWDLWGPL+VCLTLS++LSV+AP  Q ALVFA+VF V+WCGAA+VTLNAQLLGGTISFFQSVCVLGYCVFPL ++A+VC+ LSL    ++ VR  VV++GFVWATRAS VFI++II  ERK+LAVYPVFFFYTF+SWMI++ 
Sbjct:    2 ADNMVTAMPTTLDEPVSETIMRDLRQVADKLKVVLLPREDQEGVVQKLKDWDLWGPLLVCLTLSLLLSVTAPESQKALVFASVFFVIWCGAAVVTLNAQLLGGTISFFQSVCVLGYCVFPLTIAAIVCVFLSLIGLGHIAVRCIVVVLGFVWATRASVVFIAKIIKAERKILAVYPVFFFYTFLSWMILLQ 192          
BLAST of mRNA_Ecto-sp13_S_contig8502.19902.1 vs. uniprot
Match: A0A7S2V1N2_9STRA (Protein YIPF n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1N2_9STRA)

HSP 1 Score: 255 bits (652), Expect = 1.150e-83
Identity = 136/181 (75.14%), Postives = 156/181 (86.19%), Query Frame = 0
Query:   29 TLDEPVSETIMRDLRSVGAKLKIVLNPRGDQDGVLTKLKDWDLWGPLMVCLTLSIVLSVSAPADQGALVFAAVFVVVWCGAALVTLNAQLLGGTISFFQSVCVLGYCVFPLLVSAVVCLILSLFNFMNVVVRVAVVLVGFVWATRASKVFISEIISDERKMLAVYPVFFFYTFISWMIVIH 209
            TLDEPVSETIMRDL+ V  KLK+VL PR +Q GVL KLK+WDLWGPLMVCLTLS++L  +APADQ ALVFAAVFVVVW GAA+VTLNAQLLGGTISFFQSVCVLGYCVFPL V A+V L++ L  F N+ V++ +V +GF WATRAS VFI++IIS +RK+LAVYPVFFFYTFISWMIVI 
Sbjct:   19 TLDEPVSETIMRDLKQVYGKLKVVLLPRENQQGVLHKLKEWDLWGPLMVCLTLSMLLCATAPADQTALVFAAVFVVVWVGAAIVTLNAQLLGGTISFFQSVCVLGYCVFPLTVVALVLLLVRLLIFNNIFVKLVLVAIGFAWATRASVVFIAQIISPQRKILAVYPVFFFYTFISWMIVIQ 199          
BLAST of mRNA_Ecto-sp13_S_contig8502.19902.1 vs. uniprot
Match: A0A836CPM4_9STRA (Protein YIPF n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPM4_9STRA)

HSP 1 Score: 255 bits (651), Expect = 1.810e-83
Identity = 134/200 (67.00%), Postives = 164/200 (82.00%), Query Frame = 0
Query:   10 FDGGIGMQTAERTPQSMMNTLDEPVSETIMRDLRSVGAKLKIVLNPRGDQDGVLTKLKDWDLWGPLMVCLTLSIVLSVSAPADQGALVFAAVFVVVWCGAALVTLNAQLLGGTISFFQSVCVLGYCVFPLLVSAVVCLILSLFNFMNVVVRVAVVLVGFVWATRASKVFISEIISDERKMLAVYPVFFFYTFISWMIVIH 209
            +DG +G         +  NTLDEPVSETIMRDLR VG+KLKIVL P+GDQ+GVL KLK+WDLWGPL+VCL LSI+LS +APA+QGALVFA+VFVVVWCGAA+VT+NAQLLGG ISFFQSVCVLGYCVFPL++++  CLI      +  + R  +V+VGF+W+TRAS VFI +IIS ERK+LAVYPVFFFY F+SWM+++ 
Sbjct:    7 YDGRLGGAPGN---MAYYNTLDEPVSETIMRDLRQVGSKLKIVLMPKGDQEGVLKKLKEWDLWGPLLVCLVLSIMLSSTAPANQGALVFASVFVVVWCGAAMVTVNAQLLGGGISFFQSVCVLGYCVFPLVLASAACLIAKALTGLFFI-RALLVVVGFMWSTRASVVFIKQIISPERKVLAVYPVFFFYAFLSWMVLLQ 202          
BLAST of mRNA_Ecto-sp13_S_contig8502.19902.1 vs. uniprot
Match: I2CPI6_NANGC (Protein YIPF n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPI6_NANGC)

HSP 1 Score: 239 bits (610), Expect = 3.650e-77
Identity = 122/181 (67.40%), Postives = 156/181 (86.19%), Query Frame = 0
Query:   29 TLDEPVSETIMRDLRSVGAKLKIVLNPRGDQDGVLTKLKDWDLWGPLMVCLTLSIVLSVSAPADQGALVFAAVFVVVWCGAALVTLNAQLLGGTISFFQSVCVLGYCVFPLLVSAVVCLILSLFNFMNVVVRVAVVLVGFVWATRASKVFISEIISDERKMLAVYPVFFFYTFISWMIVIH 209
            TLDEPV +T+ RDL  VG+KL++VL PR +QDGVL KLKDWDLWGPL+VCLTLSI+LS++AP +QGALVFAAVF VVW GAA+VT+NAQLLGGTISFFQS+C+LGYCVFPL ++A+  L++ L  F ++VV+  VV VGF WATRAS VFI ++I+ ERK+LA++PVFFFYTF++W+++I 
Sbjct:   28 TLDEPVWQTVKRDLTQVGSKLQVVLLPRENQDGVLKKLKDWDLWGPLLVCLTLSILLSITAPEEQGALVFAAVFFVVWFGAAVVTMNAQLLGGTISFFQSLCILGYCVFPLDIAALANLLIGL-AFQSLVVKAVVVAVGFAWATRASVVFIGQVIAPERKVLALFPVFFFYTFLAWLVLIQ 207          
BLAST of mRNA_Ecto-sp13_S_contig8502.19902.1 vs. uniprot
Match: A0A1V9Z1I2_9STRA (Protein YIPF n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z1I2_9STRA)

HSP 1 Score: 226 bits (575), Expect = 5.090e-72
Identity = 113/184 (61.41%), Postives = 149/184 (80.98%), Query Frame = 0
Query:   26 MMNTLDEPVSETIMRDLRSVGAKLKIVLNPRGDQDGVLTKLKDWDLWGPLMVCLTLSIVLSVSAPADQGALVFAAVFVVVWCGAALVTLNAQLLGGTISFFQSVCVLGYCVFPLLVSAVVCLILSLFNFMNVVVRVAVVLVGFVWATRASKVFISEIISDERKMLAVYPVFFFYTFISWMIVIH 209
            ++NTLDEPVSETIMRD+R VG+KLK+VL P+   D  L  L+DWDLWGPLMVCLTLSI+LS++AP +Q A+VF +VFVVVW GAA+VT+NAQLLG TISFFQS+CVLGYCVFPL+++ + C +  + +  +V +R+  V +GF+W+TRAS VF+S+++  ++K L VYPV  FY FISWMI+I 
Sbjct:   13 VVNTLDEPVSETIMRDVRLVGSKLKVVLAPKNTSDETLQALRDWDLWGPLMVCLTLSIMLSMTAPTNQSAMVFTSVFVVVWVGAAVVTINAQLLGSTISFFQSICVLGYCVFPLVIATIACFLTRVVS-SHVAIRLVFVGIGFIWSTRASVVFMSQLVPPKKKALTVYPVLLFYIFISWMILIQ 195          
BLAST of mRNA_Ecto-sp13_S_contig8502.19902.1 vs. uniprot
Match: A0A067CCZ0_SAPPC (Protein YIPF n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CCZ0_SAPPC)

HSP 1 Score: 224 bits (571), Expect = 2.060e-71
Identity = 115/182 (63.19%), Postives = 148/182 (81.32%), Query Frame = 0
Query:   28 NTLDEPVSETIMRDLRSVGAKLKIVLNPRGDQDGVLTKLKDWDLWGPLMVCLTLSIVLSVSAPADQGALVFAAVFVVVWCGAALVTLNAQLLGGTISFFQSVCVLGYCVFPLLVSAVVCLILSLFNFMNVVVRVAVVLVGFVWATRASKVFISEIISDERKMLAVYPVFFFYTFISWMIVIH 209
            NTLDEPVSETI+RD+R VG+KLK+VL PR   D  L  L+DWDLWGPLMVCL LSI+LS++APA+Q A+VF +VFVVVW GAA+VT+NAQLLG TISFFQS+CVLGYCVFPL+++ + C +  + +  +V +R+ +V VGFVW+TRAS VF+S+++  ++K L VYPV  FY FISWMI+I 
Sbjct:   15 NTLDEPVSETILRDVRLVGSKLKVVLMPRNTSDETLQALRDWDLWGPLMVCLMLSILLSLTAPANQSAMVFTSVFVVVWVGAAVVTVNAQLLGSTISFFQSICVLGYCVFPLVIATLACFLTRVVS-SHVTIRLILVGVGFVWSTRASVVFMSQLVPPKKKALTVYPVLLFYIFISWMILIQ 195          
BLAST of mRNA_Ecto-sp13_S_contig8502.19902.1 vs. uniprot
Match: F0Y2B8_AURAN (Protein YIPF n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2B8_AURAN)

HSP 1 Score: 223 bits (569), Expect = 3.760e-71
Identity = 123/181 (67.96%), Postives = 145/181 (80.11%), Query Frame = 0
Query:   29 TLDEPVSETIMRDLRSVGAKLKIVLNPRGDQDGVLTKLKDWDLWGPLMVCLTLSIVLSVSAPADQGALVFAAVFVVVWCGAALVTLNAQLLGGTISFFQSVCVLGYCVFPLLVSAVVCLILSLFNFMNVVVRVAVVLVGFVWATRASKVFISEIISDERKMLAVYPVFFFYTFISWMIVIH 209
            TLDEPV ETIMRDLR VGAKLK+V+ PR  Q+GVL +LK+WDLWGPL VCL LSIVLSVSAP  Q ALVFAAVFVVVW GAA+VTLNAQLLGG ISFFQSVC+LGY +FPL V A++CL+L      ++++R  VV V F W+TR S VF  EII  +R+ LA+YPVF FY+FI+WMI+I 
Sbjct:   12 TLDEPVRETIMRDLREVGAKLKLVILPRVSQEGVLDRLKEWDLWGPLAVCLALSIVLSVSAPEAQRALVFAAVFVVVWVGAAIVTLNAQLLGGRISFFQSVCILGYSIFPLNVGALLCLVLHPVT-KSLLLRALVVGVCFAWSTRVSVVFFGEIIEAKRRALAIYPVFGFYSFIAWMILIQ 191          
BLAST of mRNA_Ecto-sp13_S_contig8502.19902.1 vs. uniprot
Match: A0A485KII9_9STRA (Protein YIPF n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485KII9_9STRA)

HSP 1 Score: 223 bits (567), Expect = 9.830e-71
Identity = 112/185 (60.54%), Postives = 146/185 (78.92%), Query Frame = 0
Query:   24 QSMMNTLDEPVSETIMRDLRSVGAKLKIVLNPRGDQDGVLTKLKDWDLWGPLMVCLTLSIVLSVSAPADQGALVFAAVFVVVWCGAALVTLNAQLLGGTISFFQSVCVLGYCVFPLLVSAVVCLILSLFNFMNVVVRVAVVLVGFVWATRASKVFISEIISDERKMLAVYPVFFFYTFISWMIVI 208
            Q    TLDEPVSETI+RD+R VG+KLK+VL P+   D  L  L+DWDLWGPL+VCL LSI+LS++AP +Q A+VF  VFVVVW GAA+VT+NAQLLG TISFFQS+CVLGYCVFPL+++ +V  +  L +  +V VR+ +V VGF+W+TRAS VF+S+++  +R+ L VYPV  FY FI+WMI+I
Sbjct:   15 QKKETTLDEPVSETILRDVRLVGSKLKVVLMPKNTSDQTLQALRDWDLWGPLLVCLVLSIMLSITAPTNQSAMVFTGVFVVVWAGAAVVTVNAQLLGSTISFFQSICVLGYCVFPLVIATLVNTVFRLASLGHVAVRIVIVAVGFIWSTRASVVFMSQLVPPKRQALTVYPVLLFYLFIAWMILI 199          
BLAST of mRNA_Ecto-sp13_S_contig8502.19902.1 vs. uniprot
Match: A0A8J2SB60_9STRA (Protein YIPF n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SB60_9STRA)

HSP 1 Score: 220 bits (560), Expect = 9.330e-70
Identity = 122/180 (67.78%), Postives = 139/180 (77.22%), Query Frame = 0
Query:   29 TLDEPVSETIMRDLRSVGAKLKIVLNPRGDQDGVLTKLKDWDLWGPLMVCLTLSIVLSVSAPADQGALVFAAVFVVVWCGAALVTLNAQLLGGTISFFQSVCVLGYCVFPLLVSAVVCLILSLFNFMNVVVRVAVVLVGFVWATRASKVFISEIISDERKMLAVYPVFFFYTFISWMIVI 208
            TLDEPVSETI RDLR VGAKLK+VL PR  Q GVL +LK+WDLWGPL VCLTLSI LS  AP  Q ALVFAAVFVVVW GAA+VTLNAQLLGG ISFFQSVCVLGY +FPL   A  CL+L      + ++R+AVV   F W+TR S VF SEII  +R+ LA+YPVF FY F++WMI+I
Sbjct:   13 TLDEPVSETIRRDLREVGAKLKLVLLPRASQHGVLDRLKEWDLWGPLAVCLTLSIALSAGAPESQRALVFAAVFVVVWAGAAIVTLNAQLLGGRISFFQSVCVLGYSIFPLDCGAFACLLLHALT-RSFLLRLAVVGTCFAWSTRVSVVFFSEIIEAKRRALAIYPVFGFYAFLAWMILI 191          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8502.19902.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LN12_ECTSI4.040e-13799.52Protein YIPF n=2 Tax=Ectocarpus TaxID=2879 RepID=D... [more]
A0A7S1UDR8_9STRA5.830e-8771.20Protein YIPF n=1 Tax=Phaeomonas parva TaxID=124430... [more]
A0A7S2V1N2_9STRA1.150e-8375.14Protein YIPF n=1 Tax=Fibrocapsa japonica TaxID=946... [more]
A0A836CPM4_9STRA1.810e-8367.00Protein YIPF n=1 Tax=Tribonema minus TaxID=303371 ... [more]
I2CPI6_NANGC3.650e-7767.40Protein YIPF n=1 Tax=Nannochloropsis gaditana (str... [more]
A0A1V9Z1I2_9STRA5.090e-7261.41Protein YIPF n=1 Tax=Thraustotheca clavata TaxID=7... [more]
A0A067CCZ0_SAPPC2.060e-7163.19Protein YIPF n=3 Tax=Saprolegniaceae TaxID=4764 Re... [more]
F0Y2B8_AURAN3.760e-7167.96Protein YIPF n=1 Tax=Aureococcus anophagefferens T... [more]
A0A485KII9_9STRA9.830e-7160.54Protein YIPF n=2 Tax=Aphanomyces TaxID=100860 RepI... [more]
A0A8J2SB60_9STRA9.330e-7067.78Protein YIPF n=1 Tax=Pelagomonas calceolata TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006977Yip1 domainPFAMPF04893Yip1coord: 39..192
e-value: 1.5E-16
score: 60.6
NoneNo IPR availablePANTHERPTHR21236:SF1PROTEIN YIPF6coord: 24..209
NoneNo IPR availablePANTHERPTHR21236GOLGI MEMBRANE PROTEIN YIP1coord: 24..209
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 209..209
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 90..94
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 95..119
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 190..208
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 71..89
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 131..152
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..70
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 158..178
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 153..157
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 179..189
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 120..130
NoneNo IPR availableTMHMMTMhelixcoord: 69..91
NoneNo IPR availableTMHMMTMhelixcoord: 157..174
NoneNo IPR availableTMHMMTMhelixcoord: 98..120
NoneNo IPR availableTMHMMTMhelixcoord: 189..208
NoneNo IPR availableTMHMMTMhelixcoord: 130..152

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8502contigEcto-sp13_S_contig8502:362..6527 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8502.19902.1mRNA_Ecto-sp13_S_contig8502.19902.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8502 362..6527 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8502.19902.1 ID=prot_Ecto-sp13_S_contig8502.19902.1|Name=mRNA_Ecto-sp13_S_contig8502.19902.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=210bp
MAEAMAMAEFDGGIGMQTAERTPQSMMNTLDEPVSETIMRDLRSVGAKLK
IVLNPRGDQDGVLTKLKDWDLWGPLMVCLTLSIVLSVSAPADQGALVFAA
VFVVVWCGAALVTLNAQLLGGTISFFQSVCVLGYCVFPLLVSAVVCLILS
LFNFMNVVVRVAVVLVGFVWATRASKVFISEIISDERKMLAVYPVFFFYT
FISWMIVIH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006977Yip1