prot_Ecto-sp13_S_contig8501.19901.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig8501.19901.1
Unique Nameprot_Ecto-sp13_S_contig8501.19901.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length713
Homology
BLAST of mRNA_Ecto-sp13_S_contig8501.19901.1 vs. uniprot
Match: D8LG51_ECTSI (TrmE, organellal GTPase involved in tRNA modification n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG51_ECTSI)

HSP 1 Score: 1100 bits (2844), Expect = 0.000e+0
Identity = 618/702 (88.03%), Postives = 631/702 (89.89%), Query Frame = 0
Query:   17 MLARGFLLALPLLLVSSPLVLSHVGAPCFVPASSAGSSSTATTRAMRLAPHTISTSACQRLLLLLASHPRRRNLLPHILSTSTLRASLHGGTVASTCGAIPPMAPAASPLLPRISSSSSSS---RGLQHLEASPTGTSPTNYIAGGPTGEPSPRPAVRRAVGSNMKTPPRANKEDRDLIGTARSPLPSPSSSSSEDTIFALATGNAGPAGVAVVRISGPLSAQVLQALTSATSXXXXXXAEASAGGDAGVTAAAAPAVVNGLGAGRRLPPFPTARRAVVRRLYDPATGDLLDEALVLWMPGPRSFTGEDTVELHTHGSRAVINGVLDALAGMGAASGTRRVRLAERGEFTQRAYGNGRMDLTGVEGLADLIAADTAAQRKQALKQMGGALRDMYEEWRHQLKGCLAHAEAVIDFGDDEEDVGGDAAFAAMMPRVRGLAGDIDRHLRDGGRGEIVRSGVRVAIVGPPNAGKSSLLNLLAARPAAIVSPVAGTTRDVVEVQMDIAGLPVTLSDTAGLREATDDEIEREGMRRARSAVDNAHLAIFVVDAINTDGATALLGKLREEAEEAEXXXXXXAAQRDDAAETEGVFGSGSSGSGSAALDDLIVVANKADLARTLLEGESGEADHHERELASLAAAVAAATAAS--GPGRTAEAVGSRVGAAETDGVRRATRGTEGDEEGTSGGGGRVWKVSCKTKEGLDG 713
            MLARGF LALPLLLV SPLVLSHVGAPCF+PASSAG S+TATTRAMRLAPHT STSACQRLLLLLASHP+RRNLLPHI STSTLRASLHGGT+ ST GA PPMAPAASPLLPR           R LQHL ASPTGTSPTN IA GPTGEPSPRPA+RRAVGSNMKT PR NKED DLI T RSPLPS SSSSSEDTIFALATGNAGPAGVAVVRISGPLSAQVLQALTSA +      AEASAGGDAGV A+AAPAVVNG GAGRRLPPFP ARRAVVRRLYDPATGDLLDEALVLWMPGPRSFTGEDTVELHTHGSRAVINGVLDALAGMGAASG RRVRLAERGEFTQRAYGNGRMDLTGVEGLADLIAADTAAQRKQALKQMGGALRDMYEEWRHQLKGCLAHAEAVIDFGDDEEDVGGDAAFAAMMPRVRGLA +IDRHLRDGGRGEIVRSGVRVAIVGPPNAGKSSLLNLLAARPAAIVSPVAGTTRDVVEVQMDIAGLPVTLSDTAGL +ATDDEIEREGMRRARSAVDNAHLAIFVVDA NTDGATALLGKLREEA+EAE      AAQRDDAAE EGVFGSGSSG GSAALDDLIVVANKADLA TLLEGESGEA+HHE+EL SL             GPGRTAEAVGSR GAAE DGV  ATRGTEGDEEG SGGGGRVWK+SCKTKEGLDG
Sbjct:    1 MLARGFSLALPLLLVLSPLVLSHVGAPCFIPASSAGLSTTATTRAMRLAPHTTSTSACQRLLLLLASHPKRRNLLPHIPSTSTLRASLHGGTITSTRGATPPMAPAASPLLPRXXXXXXXXXXXRRLQHLAASPTGTSPTNPIARGPTGEPSPRPALRRAVGSNMKTLPRTNKEDGDLISTTRSPLPSASSSSSEDTIFALATGNAGPAGVAVVRISGPLSAQVLQALTSAANLSSVTAAEASAGGDAGVAASAAPAVVNGGGAGRRLPPFPAARRAVVRRLYDPATGDLLDEALVLWMPGPRSFTGEDTVELHTHGSRAVINGVLDALAGMGAASGMRRVRLAERGEFTQRAYGNGRMDLTGVEGLADLIAADTAAQRKQALKQMGGALRDMYEEWRHQLKGCLAHAEAVIDFGDDEEDVGGDAAFAAMMPRVRGLAAEIDRHLRDGGRGEIVRSGVRVAIVGPPNAGKSSLLNLLAARPAAIVSPVAGTTRDVVEVQMDIAGLPVTLSDTAGLPKATDDEIEREGMRRARSAVDNAHLAIFVVDATNTDGATALLGKLREEAKEAEAEAAATAAQRDDAAEMEGVFGSGSSGGGSAALDDLIVVANKADLALTLLEGESGEAEHHEQELTSLXXXXXXXXXXXXXGPGRTAEAVGSRAGAAEMDGVGAATRGTEGDEEGRSGGGGRVWKLSCKTKEGLDG 702          
BLAST of mRNA_Ecto-sp13_S_contig8501.19901.1 vs. uniprot
Match: A0A6H5K111_9PHAE (TrmE-type G domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K111_9PHAE)

HSP 1 Score: 853 bits (2205), Expect = 8.730e-305
Identity = 478/539 (88.68%), Postives = 483/539 (89.61%), Query Frame = 0
Query:  178 MKTPPRANKEDRDLIGTARSPLPSPSSSSSEDTIFALATGNAGPAGVAVVRISGPLSAQVLQALTSATSXXXXXXAEASAGGDAGVTAAAAPAVVNGLG-AGRRLPPFPTARRAVVRRLYDPATGDLLDEALVLWMPGPRSFTGEDTVELHTHGSRAVINGVLDALAGMGAASGTRRVRLAERGEFTQRAYGNGRMDLTGVEGLADLIAADTAAQRKQALKQMGGALRDMYEEWRHQLKGCLAHAEAVIDFGDDEEDVGGDAAFAAMMPRVRGLAGDIDRHLRDGGRGEIVRSGVRVAIVGPPNAGKSSLLNLLAARPAAIVSPVAGTTRDVVEVQMDIAGLPVTLSDTAGLREATDDEIEREGMRRARSAVDNAHLAIFVVDAINTDGATALLGKLREEAEEAEXXXXXX--AAQRDDAAETEGVFGSGSSGSGSAALDDLIVVANKADLARTLLEGESGEADHHERELASLAAAVAAATAASGPGRTAEAVGSRVGAAETDGVRRATRGTEGDEEGTSGGGGRVWKVSCKTKEGLDG 713
            MKTPPR NKED DLIGTARSPLPSPSSSSSEDTIFALATGNAGPAGVAVVRISGPLSAQVLQALTSAT+      AEASAG DAGV              AGRRLPPFP ARRAVVRRLYDPATGDLLDEALVLWMPGPRSFTGEDTVELHTHGSRAVINGVLDALA MGAASG RRVRLAERGEFTQRAYGNGRMDLTGVEGLADL+AADTAAQRKQALKQMGGALRDMYEEWRHQLKGCLAHAEAVIDFGDDEEDVGGDAAF+AMMPRVRGLA +IDRHLRDGGRGEIVRSGVRVAIVGPPNAGKSSLLNLLAARPAAIVSPVAGTTRDVVEVQMDIAGLPVTLSDTAGLREATDDEIEREGMRRARSAVDNAHLAIFVVDA NTDGATALLGKLREEA+EAE        AAQRD AAETEGVFG          LDDLIVVANKADLA TLLEGESGEADHHEREL SLAAA AAAT ASGPG TAEAVGSR GAAETDGV  ATRGTEGDEEGTSG GGRVWKVSCKTKEGLDG
Sbjct:    1 MKTPPRTNKEDGDLIGTARSPLPSPSSSSSEDTIFALATGNAGPAGVAVVRISGPLSAQVLQALTSATTLSSATAAEASAGRDAGVAXXXXXXXXXXXXXAGRRLPPFPAARRAVVRRLYDPATGDLLDEALVLWMPGPRSFTGEDTVELHTHGSRAVINGVLDALAAMGAASGLRRVRLAERGEFTQRAYGNGRMDLTGVEGLADLVAADTAAQRKQALKQMGGALRDMYEEWRHQLKGCLAHAEAVIDFGDDEEDVGGDAAFSAMMPRVRGLAAEIDRHLRDGGRGEIVRSGVRVAIVGPPNAGKSSLLNLLAARPAAIVSPVAGTTRDVVEVQMDIAGLPVTLSDTAGLREATDDEIEREGMRRARSAVDNAHLAIFVVDATNTDGATALLGKLREEAKEAEAEAEAAVTAAQRDYAAETEGVFGGXXXXXXXXXLDDLIVVANKADLALTLLEGESGEADHHERELTSLAAAAAAATXASGPGTTAEAVGSRAGAAETDGVGAATRGTEGDEEGTSGSGGRVWKVSCKTKEGLDG 539          
BLAST of mRNA_Ecto-sp13_S_contig8501.19901.1 vs. uniprot
Match: A0A836CK05_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK05_9STRA)

HSP 1 Score: 403 bits (1036), Expect = 2.060e-130
Identity = 231/364 (63.46%), Postives = 263/364 (72.25%), Query Frame = 0
Query:  209 DTIFALATGNAGPAGVAVVRISGPLSAQVLQALTSATSXXXXXXAEASAGGDAGVTAAAAPAVVNGLGAGRRLPPFPTARRAVVRRLYDPATGDLLDEALVLWMPGPRSFTGEDTVELHTHGSRAVINGVLDALAGMGAASGTRRVRLAERGEFTQRAYGNGRMDLTGVEGLADLIAADTAAQRKQALKQMGGALRDMYEEWRHQLKGCLAHAEAVIDFGDDEEDVGGDAAFAAMMPRVRGLAGDIDRHLRDGGRGEIVRSGVRVAIVGPPNAGKSSLLNLLAARPAAIVSPVAGTTRDVVEVQMDIAGLPVTLSDTAGLR--EATDDEIEREGMRRARSAVDNAHLAIFVVDAIN-TDGATAL 569
            DTIFAL++G AG AGVAV+R+SGP +   L  L +A                                   R    P ARRA VRRLYDP  GDLLDEALVLWMPGPRSFTGEDT ELHTHGSRAV+ GVL AL   G   G   +R AERGEFTQRAYGNGRMDLT VEGLADLIAADTA QR+QAL+QMGGAL+D YE WR +L  CLAH EAVIDFGDDE+DV  + A+AA+ P+V GL  ++  HL D  RGEIVR+GVRVAI GPPNAGKSSLLN+LA RPAAIVSP+AGTTRDVV++Q+DIAGLPV LSDTAGLR  EA  D++EREG+RRAR AV ++ L IFV D+ N  +GA AL
Sbjct:    4 DTIFALSSGPAGQAGVAVIRVSGPAAGDALHTLITAPG---------------------------------RHAKMPEARRAAVRRLYDPVKGDLLDEALVLWMPGPRSFTGEDTTELHTHGSRAVVGGVLGAL---GTIPG---LRPAERGEFTQRAYGNGRMDLTEVEGLADLIAADTAEQRRQALRQMGGALKDKYESWREELTKCLAHTEAVIDFGDDEDDVD-EGAYAAIRPKVSGLIQELRVHLADNRRGEIVRNGVRVAIAGPPNAGKSSLLNVLAERPAAIVSPIAGTTRDVVQLQLDIAGLPVVLSDTAGLRAAEAAADDVEREGIRRAREAVVDSQLTIFVWDSSNEAEGAAAL 327          
BLAST of mRNA_Ecto-sp13_S_contig8501.19901.1 vs. uniprot
Match: A0A4D9CTT5_9STRA (TrmE-type G domain-containing protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CTT5_9STRA)

HSP 1 Score: 374 bits (960), Expect = 3.620e-119
Identity = 194/286 (67.83%), Postives = 227/286 (79.37%), Query Frame = 0
Query:  283 PFPTARRAVVRRLYDPATGDLLDEALVLWMPGPRSFTGEDTVELHTHGSRAVINGVLDALAGMGAASGTRRVRLAERGEFTQRAYGNGRMDLTGVEGLADLIAADTAAQRKQALKQMGGALRDMYEEWRHQLKGCLAHAEAVIDFGDDEEDVGGDAAFAAMMPRVRGLAGDIDRHLRDGGRGEIVRSGVRVAIVGPPNAGKSSLLNLLAARPAAIVSPVAGTTRDVVEVQMDIAGLPVTLSDTAGLREATDDEIEREGMRRARSAVDNAHLAIFVVDAINTDGATA 568
            PFP  R A +R+LY P   + LD+A+VLW+PGPRSFTGEDTVELH HGSRAV+ GV +AL  +    G  RVRLAE GEFT+RA+ NGRMDLT VEGLADLIAADTAAQRKQALKQMGGALR  YE WR +LK CLAH EAVIDFGDDE DV  +AA+ A+ PRVR L+ ++ RHL DGGRGE++R+G+RVAIVGPPNAGKS++LN LA RPAAIVSP AGTTRDVVEVQ+D+ GLPV +SDTAG+REA  D +E+EG+RRAR A   A L + V+DA    G  A
Sbjct:   11 PFPAPRMASLRKLYSPVGQEALDQAIVLWLPGPRSFTGEDTVELHCHGSRAVVQGVTEALLALDK-GGKARVRLAEPGEFTERAFANGRMDLTEVEGLADLIAADTAAQRKQALKQMGGALRQTYEGWREELKVCLAHTEAVIDFGDDELDVD-EAAYDAIRPRVRRLSEEMRRHLADGGRGEVIRAGIRVAIVGPPNAGKSTMLNTLARRPAAIVSPAAGTTRDVVEVQLDVGGLPVLVSDTAGIREAARDPVEQEGIRRAREAAGRAQLTVLVLDAAEVLGREA 294          
BLAST of mRNA_Ecto-sp13_S_contig8501.19901.1 vs. uniprot
Match: A0A7S3H4J6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H4J6_9STRA)

HSP 1 Score: 339 bits (870), Expect = 3.930e-107
Identity = 191/347 (55.04%), Postives = 233/347 (67.15%), Query Frame = 0
Query:  203 SSSSSEDTIFALATGNAGPAGVAVVRISGPLSAQVLQALTSATSXXXXXXAEASAGGDAGVTAAAAPAVVNGLGAGRRLPPF-PTARRAVVRRLYDPATGDLLDEALVLWMPGPRSFTGEDTVELHTHGSRAVINGVLDALAGMGAASGTRRVRLAERGEFTQRAYGNGRMDLTGVEGLADLIAADTAAQRKQALKQMGGALRDMYEEWRHQLKGCLAHAEAVIDFGDDE-EDVGGDAAFAAMMPRVRGLAGDIDRHLRDGGRGEIVRSGVRVAIVGPPNAGKSSLLNLLAARPAAIVSPVAGTTRDVVEVQMDIAGLPVTLSDTAGLREATDDEIEREGMRRARSA 547
            S+S+  DTIFAL++G    +GVAVVRISGP S   L+ L                                 +  G    PF P  R A ++ LY P T D+LD++L+LW PGPRSFTGED VELH HGSRAVI GV +AL  +      R +R A  GEFT+RA+ NG+MDLT VEGL+DL+ A+T+ QRKQALKQM G LR  YE WR  L  CLAH EAVIDFGDD+ ED   DAA  A+ PRVR L  ++ RHL+DG RGE+VR G+ +A+ GPPNAGKSSL+N LA RPAAIVSP+AGTTRD+VEV++++AG+P  +SDTAGLRE + D IE EGMRRAR A
Sbjct:   52 STSAGLDTIFALSSGPIAKSGVAVVRISGPSSLYCLERLA--------------------------------VKPGASTSPFAPKPREATLKALYSPVTDDVLDQSLILWFPGPRSFTGEDVVELHVHGSRAVIKGVFEALEHLDDPLSGRAIRPAAPGEFTRRAFDNGKMDLTEVEGLSDLLDAETSEQRKQALKQMEGHLRKQYEAWRDVLMSCLAHTEAVIDFGDDDREDDVSDAALHALQPRVRTLLSELQRHLQDGRRGELVREGIHIALAGPPNAGKSSLMNALARRPAAIVSPIAGTTRDIVEVRLELAGVPCIVSDTAGLREHSQDVIELEGMRRAREA 366          
BLAST of mRNA_Ecto-sp13_S_contig8501.19901.1 vs. uniprot
Match: A0A2V3IXG2_9FLOR (tRNA modification GTPase GTPBP3, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXG2_9FLOR)

HSP 1 Score: 327 bits (837), Expect = 1.610e-99
Identity = 191/362 (52.76%), Postives = 235/362 (64.92%), Query Frame = 0
Query:  208 EDTIFALATGNAGPAGVAVVRISGPLSAQVLQALTSATSXXXXXXAEASAGGDAGVTAAAAPAVVNGLGAGRRLPPFPTARRAVVRRLYDPATGDLLDEALVLWMPGPRSFTGEDTVELHTHGSRAVINGVLDALAGMGAASGTRRVRLAERGEFTQRAYGNGRMDLTGVEGLADLIAADTAAQRKQALKQMGGALRDMYEEWRHQLKGCLAHAEAVIDFGDDEEDVGGDAAFAAMMPRVRGLAGDIDRHLRDGGRGEIVRSGVRVAIVGPPNAGKSSLLNLLAARPAAIVSPVAGTTRDVVEVQMDIAGLPVTLSDTAGLREATDDEIEREGMRRARSAVDNAHLAIFVVDAINTDGATAL 569
            EDTIFAL++G    AGVAV+R+SGP +A  L  +++ ++                                      P  R A +R+LY P + +LLDEALVL+ PGP SFTGED VEL  HGSRAVI+ V++ALA          +R AERGEFT+RA+ NGR+DLT VEGLADLIAA+TA QRKQAL  + G +++  EEWR ++K CLAH EAVIDFGDD +D      F  ++PRV+ L   I  HL D  RGEI+R G RVAIVG PNAGKS+LLN LA RPAAIVSP AGTTRDVVEVQ+D+ GL V +SDTAGLR++T+D IE EG+RRAR A   A + + V D    D  TAL
Sbjct:   79 EDTIFALSSGAGVTAGVAVIRVSGPHAADCLLKISAPSTRQK----------------------------------LPRPRYAALRKLYHPLSEELLDEALVLFFPGPNSFTGEDVVELQVHGSRAVISAVVNALADC--TDPDTMIRPAERGEFTRRAFENGRLDLTAVEGLADLIAAETAMQRKQALWHLSGHVKETLEEWRTEIKTCLAHVEAVIDFGDDVDD----QVFEDIIPRVQALRAQIKAHLDDAHRGEIIRGGARVAIVGKPNAGKSTLLNALAKRPAAIVSPHAGTTRDVVEVQLDLNGLAVVVSDTAGLRDSTNDPIEIEGIRRAREAAARADITVLVHDVTEGDLETAL 400          
BLAST of mRNA_Ecto-sp13_S_contig8501.19901.1 vs. uniprot
Match: A0A1V9Y6N3_9STRA (tRNA modification GTPase TrmE n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y6N3_9STRA)

HSP 1 Score: 310 bits (794), Expect = 1.830e-94
Identity = 183/353 (51.84%), Postives = 235/353 (66.57%), Query Frame = 0
Query:  207 SEDTIFALATGNAGPAGVAVVRISGPLSAQVLQALTSATSXXXXXXAEASAGGDAGVTAAAAPAVVNGLGAGRRLPPFPTARRAVVRRLYDPATGDLLDEALVLWMPGPRSFTGEDTVELHTHGSRAVINGVLDALAGMGAASGTRRVRLAERGEFTQRAYGNGRMDLTGVEGLADLIAADTAAQRKQALKQMGGALRDMYEEWRHQLKGCLAHAEAVIDFGDDEEDVGGDAAFAAMMPRVRGLAGDIDRHLRDGGRGEIVRSGVRVAIVGPPNAGKSSLLNLLAARPAAIVSPVAGTTRDVVEVQMDIAGLPVTLSDTAGLREATDDEIEREGMRRARSAVDNAHLAIFVVD 559
            S DTI+AL++   G AGVAVVRISGP +   L  L+                                     +  P P  R AVVR ++ P + +LLD A+ +  P P+SFTGED VELH HGSR V+ GVL ALA + +       R AE GEFT+RA+ N +MDL  VEGLADL+ A+T AQRKQAL Q+ G++  +YEEWR  L  C+AHAEA+IDFGDDE+DV  DAA+ +++ +V+ L G I +HL DG RGEI+R+GV+VAI+G PNAGKSSLLN+LA R AAIVSP+AGTTRD+V+V +++AG PVTLSDTAG+RE TDD IE+EG+ RA    + AH+ + VVD
Sbjct:   18 STDTIYALSSAE-GRAGVAVVRISGPQANWCLMQLSK-----------------------------------DKKKPLPKPRMAVVRDIHHPTSRELLDSAMAIRFPQPKSFTGEDVVELHLHGSRPVVKGVLQALAEIPSC------RPAEAGEFTERAFENHKMDLMQVEGLADLLNAETEAQRKQALHQISGSVGQVYEEWRMTLIRCMAHAEAMIDFGDDEDDVT-DAAYDSVILKVQELLGSIQKHLADGRRGEILRNGVQVAILGAPNAGKSSLLNILAQRDAAIVSPIAGTTRDIVQVPLNLAGYPVTLSDTAGIRE-TDDIIEQEGVLRAHKCREEAHIKLLVVD 326          
BLAST of mRNA_Ecto-sp13_S_contig8501.19901.1 vs. uniprot
Match: A0A1V9YNZ5_9STRA (tRNA modification GTPase TrmE n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YNZ5_9STRA)

HSP 1 Score: 309 bits (792), Expect = 2.690e-94
Identity = 184/357 (51.54%), Postives = 237/357 (66.39%), Query Frame = 0
Query:  207 SEDTIFALATGNAGPAGVAVVRISGPLSAQVLQALTSATSXXXXXXAEASAGGDAGVTAAAAPAVVNGLGAGRRLPPFPTARRAVVRRLYDPATGDLLDEALVLWMPGPRSFTGEDTVELHTHGSRAVINGVLDALAGMGAASGTRRVRLAERGEFTQRAYGNGRMDLTGVEGLADLIAADTAAQRKQALKQMGGALRDMYEEWRHQLKGCLAHAEAVIDFGDDEEDVGGDAAFAAMMPRVRGLAGDIDRHLRDGGRGEIVRSGVRVAIVGPPNAGKSSLLNLLAARPAAIVSPVAGTTRDVVEVQMDIAGLPVTLSDTAGLREATDDEIEREGMRRARSAVDNAHLAIFVVDAINT 563
            S+DTI+AL++   G AGVAVVRISGP++   L  +T+A                                            RAVVR ++ P+T ++LD A+ +  P P+SFTGED VELH HGSR V+ GVL AL+ + +       R AE GEFT+RA+ N +MDL  VEGLADL+ ++T AQRKQAL Q+ G++  +YE+WR  L  C+AHAEA IDFGDDE+DV  DAA+ A++ +VR L   I RHL DG RGEI+R+GV+VAI+G PNAGKSSLLN+LA R AAIVSP+AGTTRD+V+V +++ G PVTLSDTAG+RE TDD IE+EG++RA      AHL I VVDA +T
Sbjct:   18 SQDTIYALSSAE-GRAGVAVVRISGPMADTCLAQMTTA--------------------------------------------RAVVRNIHHPSTKEVLDSAMAIRFPQPKSFTGEDIVELHLHGSRPVVTGVLQALSTIPSC------RPAEPGEFTERAFDNHKMDLMQVEGLADLLNSETEAQRKQALHQISGSVGQVYEDWRLTLVRCMAHAEANIDFGDDEDDVT-DAAYDAVVDKVRELHASIGRHLADGRRGEILRNGVQVAILGAPNAGKSSLLNVLARRDAAIVSPIAGTTRDIVQVPLNLGGYPVTLSDTAGIRE-TDDVIEKEGVQRAHKCRAEAHLKILVVDANDT 321          
BLAST of mRNA_Ecto-sp13_S_contig8501.19901.1 vs. uniprot
Match: A0A7S4B1K1_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B1K1_CHRCT)

HSP 1 Score: 311 bits (796), Expect = 9.410e-94
Identity = 189/367 (51.50%), Postives = 231/367 (62.94%), Query Frame = 0
Query:  209 DTIFALATGNAGPAGVAVVRISGPLSAQVLQALTSATSXXXXXXAEASAGGDAGVTAAAAPAVVNGLGAGRRLPPFPTARRAVVRRLYDPAT--------------GDLLDEALVLWMPGPRSFTGEDTVELHTHGSRAVINGVLDALAGMGAASGTRRVRLAERGEFTQRAYGNGRMDLTGVEGLADLIAADTAAQRKQALKQMGGALRDMYEEWRHQLKGCLAHAEAVIDFGDDEEDVGGDAAFAAMMPRVRGLAGDIDRHLRDGGRGEIVRSGVRVAIVGPPNAGKSSLLNLLAARPAAIVSPVAGTTRDVVEVQMDIAGLPVTLSDTAGLREATDDEIEREGMRRARSAVDNAHLAIFVVDAI 561
            +TIFAL++G  G AGV+V+RISGP + +VL  +                                G      LPP    R+AV+RRL  P+                +L+D+ALVLW PGPRSFTGED VELHTHGSRAV+   L AL      +  R +RLAE GEFT++A+ NGRM LT VEGL DLI +DT  QRKQAL QM G  R ++E WR  L G LAH EA+IDFG+D +DV  +AA +  + RVR L  ++   LRDG RGE VR GVR+AI+GPPNAGKSSLLN LAAR AAIVSP AGTTRDVV + +++ GLPV +SDTAGLR  T DEIER+GM RA      AHL ++V DA+
Sbjct:   64 ETIFALSSGG-GRAGVSVIRISGPQAREVLLQMAP------------------------------GRQGAAELPP---PRQAVLRRLRQPSEHGGGCGDRGGEGPPAELIDQALVLWFPGPRSFTGEDVVELHTHGSRAVVAATLGAL------NSIRGLRLAEPGEFTRQAFSNGRMSLTEVEGLGDLINSDTEEQRKQALAQMEGVQRRVFEGWRETLLGSLAHTEALIDFGEDADDVT-EAALSGAVSRVRSLRAEMAARLRDGERGEAVRDGVRLAILGPPNAGKSSLLNALAARDAAIVSPTAGTTRDVVSLTLELGGLPVVVSDTAGLRAETADEIERQGMARAAKEAARAHLQLWVYDAL 389          
BLAST of mRNA_Ecto-sp13_S_contig8501.19901.1 vs. uniprot
Match: K3WYT9_GLOUD (TrmE-type G domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WYT9_GLOUD)

HSP 1 Score: 308 bits (790), Expect = 1.400e-93
Identity = 178/356 (50.00%), Postives = 237/356 (66.57%), Query Frame = 0
Query:  209 DTIFALATGNAGPAGVAVVRISGPLSAQVLQALTSATSXXXXXXAEASAGGDAGVTAAAAPAVVNGLGAGRRLPPFPTARRAVVRRLYDPATGDLLDEALVLWMPGPRSFTGEDTVELHTHGSRAVINGVLDALAGMGAASGTRRVRLAERGEFTQRAYGNGRMDLTGVEGLADLIAADTAAQRKQALKQMGGALRDMYEEWRHQLKGCLAHAEAVIDFGDDEEDVGGDAAFAAMMPRVRGLAGDIDRHLRDGGRGEIVRSGVRVAIVGPPNAGKSSLLNLLAARPAAIVSPVAGTTRDVVEVQMDIAGLPVTLSDTAGLREATDDEIEREGMRRARSAVDNAHLAIFVVDAINTD 564
            DTI+AL++   G AGVAV+RISG  + Q L+ L+   +                                      P AR A  R+LY P + + LD+A+ +  P PRSFTGED VELH HGS AV++GV++AL+ M         R+AE GEFT+RA+ N ++DL  VEGLADL++A+T AQR QAL+Q+ G + D+YE WR +L  CLA+ EA+IDFGDDE+DV  DA++ A + RVR LA  I +HL DG +GEI+R+GV+VAI+GPPNAGKSSLLN+LA RPAAIVS +AGTTRD+V+V ++IAG PV +SDTAGLRE T+D IE+EG+ RA+     A + I ++D  NT+
Sbjct:   35 DTIYALSSAE-GKAGVAVIRISGESAEQCLRQLSKTET-------------------------------------LPEARMAAFRKLYHPVSKEHLDDAIAIRFPQPRSFTGEDVVELHVHGSIAVVSGVMEALSHMP------HCRVAEPGEFTERAFENNKIDLMQVEGLADLLSAETEAQRTQALRQLSGEIGDVYEHWRSELVRCLAYTEAMIDFGDDEDDVT-DASYEAAIDRVRALATSIQKHLADGRKGEILRNGVQVAILGPPNAGKSSLLNILARRPAAIVSSIAGTTRDIVQVPLNIAGYPVLVSDTAGLRE-TEDAIEQEGVLRAQQCATEADVRIVMMDIQNTE 344          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8501.19901.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LG51_ECTSI0.000e+088.03TrmE, organellal GTPase involved in tRNA modificat... [more]
A0A6H5K111_9PHAE8.730e-30588.68TrmE-type G domain-containing protein n=1 Tax=Ecto... [more]
A0A836CK05_9STRA2.060e-13063.46Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9CTT5_9STRA3.620e-11967.83TrmE-type G domain-containing protein n=4 Tax=Mono... [more]
A0A7S3H4J6_9STRA3.930e-10755.04Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A2V3IXG2_9FLOR1.610e-9952.76tRNA modification GTPase GTPBP3, mitochondrial n=1... [more]
A0A1V9Y6N3_9STRA1.830e-9451.84tRNA modification GTPase TrmE n=1 Tax=Thraustothec... [more]
A0A1V9YNZ5_9STRA2.690e-9451.54tRNA modification GTPase TrmE n=1 Tax=Achlya hypog... [more]
A0A7S4B1K1_CHRCT9.410e-9451.50Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
K3WYT9_GLOUD1.400e-9350.00TrmE-type G domain-containing protein n=1 Tax=Glob... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 563..597
NoneNo IPR availableGENE3D3.40.50.300coord: 471..633
e-value: 7.3E-60
score: 205.4
NoneNo IPR availablePANTHERPTHR42714FAMILY NOT NAMEDcoord: 205..637
NoneNo IPR availablePANTHERPTHR42714:SF2TRNA MODIFICATION GTPASE GTPBP3, MITOCHONDRIALcoord: 205..637
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 39..713
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..38
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 21..31
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 32..38
NoneNo IPR availableTMHMMTMhelixcoord: 21..43
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 469..647
e-value: 0.0099
score: 25.1
IPR027368tRNA modification GTPase MnmE domain 2GENE3D1.20.120.430coord: 372..656
e-value: 7.3E-60
score: 205.4
IPR027266GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1GENE3D3.30.1360.120coord: 203..371
e-value: 2.8E-35
score: 122.9
IPR018948GTP-binding protein TrmE, N-terminalPFAMPF10396TrmE_Ncoord: 210..371
e-value: 8.2E-33
score: 113.2
IPR025867MnmE, helical domainPFAMPF12631MnmE_helicalcoord: 374..590
e-value: 1.4E-23
score: 85.1
IPR006073GTP binding domainPFAMPF01926MMR_HSR1coord: 472..570
e-value: 2.9E-21
score: 75.7
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 471..564
e-value: 5.6E-16
score: 56.7
IPR031168TrmE-type guanine nucleotide-binding domainPROSITEPS51709G_TRMEcoord: 470..713
score: 50.969
IPR004520tRNA modification GTPase MnmEHAMAPMF_00379GTPase_MnmEcoord: 209..709
score: 26.158
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 317..628

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8501contigEcto-sp13_S_contig8501:493..6838 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8501.19901.1mRNA_Ecto-sp13_S_contig8501.19901.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig8501 493..6838 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig8501.19901.1 ID=prot_Ecto-sp13_S_contig8501.19901.1|Name=mRNA_Ecto-sp13_S_contig8501.19901.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=713bp
CQRLVSLVVLNAKHHEMLARGFLLALPLLLVSSPLVLSHVGAPCFVPASS
AGSSSTATTRAMRLAPHTISTSACQRLLLLLASHPRRRNLLPHILSTSTL
RASLHGGTVASTCGAIPPMAPAASPLLPRISSSSSSSRGLQHLEASPTGT
SPTNYIAGGPTGEPSPRPAVRRAVGSNMKTPPRANKEDRDLIGTARSPLP
SPSSSSSEDTIFALATGNAGPAGVAVVRISGPLSAQVLQALTSATSLSSV
TAAEASAGGDAGVTAAAAPAVVNGLGAGRRLPPFPTARRAVVRRLYDPAT
GDLLDEALVLWMPGPRSFTGEDTVELHTHGSRAVINGVLDALAGMGAASG
TRRVRLAERGEFTQRAYGNGRMDLTGVEGLADLIAADTAAQRKQALKQMG
GALRDMYEEWRHQLKGCLAHAEAVIDFGDDEEDVGGDAAFAAMMPRVRGL
AGDIDRHLRDGGRGEIVRSGVRVAIVGPPNAGKSSLLNLLAARPAAIVSP
VAGTTRDVVEVQMDIAGLPVTLSDTAGLREATDDEIEREGMRRARSAVDN
AHLAIFVVDAINTDGATALLGKLREEAEEAEAEAAATAAQRDDAAETEGV
FGSGSSGSGSAALDDLIVVANKADLARTLLEGESGEADHHERELASLAAA
VAAATAASGPGRTAEAVGSRVGAAETDGVRRATRGTEGDEEGTSGGGGRV
WKVSCKTKEGLDG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR027368MnmE_dom2
IPR027266TrmE/GcvT_dom1
IPR018948GTP-bd_TrmE_N
IPR025867MnmE_helical
IPR006073GTP_binding_domain
IPR005225Small_GTP-bd_dom
IPR031168G_TrmE
IPR004520GTPase_MnmE
IPR027417P-loop_NTPase