prot_Ecto-sp13_S_contig850.19899.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig850.19899.1
Unique Nameprot_Ecto-sp13_S_contig850.19899.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length230
Homology
BLAST of mRNA_Ecto-sp13_S_contig850.19899.1 vs. uniprot
Match: D7G6B4_ECTSI (Rab11B, RAB family GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6B4_ECTSI)

HSP 1 Score: 446 bits (1147), Expect = 2.950e-158
Identity = 228/229 (99.56%), Postives = 229/229 (100.00%), Query Frame = 0
Query:    1 MASRSSLEYDYLFKIVLVGDAAVGKTNLLACYTSQDKRQRPDGTVPSFRSDRKTTVGVEFATMVVTHPDGKRIKAQIWDTAGQERYRAITSSHYKRASGALLVYDVTSRSSFENAEKVWLRELKNAADSNSSLLDSLVLVGNKVDLPNADVTEAEQESSAMRMGLASSARVSAKTGQGVDKAFERLILRVYEVEHGRGQQAAPPKEAAPKGIVLATPKPRAEEDKLDCC 229
            MASRSSLEYDYLFKIVLVGDAAVGKTNLLACYTSQDKRQRPDGTVPSFRSDRKTTVGVEFATMVVTHPDGKRIKAQIWDTAGQERYRAITSSHYKRASGALLVYDVTSRSSFENAEKVWLRELKNAADSNSSLLDSLVLVGNKVDLPNADVTEAEQESSAMRMGLASSARVSAKTGQGVDKAFERLILRVYEVEHGRGQQAAPPKEAAPKGIVLATPKPRAEEDKL+CC
Sbjct:    1 MASRSSLEYDYLFKIVLVGDAAVGKTNLLACYTSQDKRQRPDGTVPSFRSDRKTTVGVEFATMVVTHPDGKRIKAQIWDTAGQERYRAITSSHYKRASGALLVYDVTSRSSFENAEKVWLRELKNAADSNSSLLDSLVLVGNKVDLPNADVTEAEQESSAMRMGLASSARVSAKTGQGVDKAFERLILRVYEVEHGRGQQAAPPKEAAPKGIVLATPKPRAEEDKLECC 229          
BLAST of mRNA_Ecto-sp13_S_contig850.19899.1 vs. uniprot
Match: A0A6G0WZ29_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WZ29_9STRA)

HSP 1 Score: 227 bits (579), Expect = 8.260e-72
Identity = 121/235 (51.49%), Postives = 162/235 (68.94%), Query Frame = 0
Query:    1 MASRSSLEYDYLFKIVLVGDAAVGKTNLLACYTSQDKRQRPDGTVPS---FRSDRKTTVGVEFATMVVTHPDGKRIKAQIWDTAGQERYRAITSSHYKRASGALLVYDVTSRSSFENAEKVWLRELKNAADSNSSLLDSLVLVGNKVDL---PNADVTEAEQESSAMRMGLASSARVSAKTGQGVDKAFERLILRVYEVEHGRGQQAAPPKEAAPKGIVLATPKPRAEEDKLDCC 229
            M   +  +YD L+K+VLVGD  VGKTNLLA +T+ +     D +  +   F + RK T+GVEF T ++THP+GKRIKAQIWDTAGQERYRAITSSHY+RA+GAL+VYDV+SRS+F+NA+  WL+EL+N+AD+NS+LL  L+LVGNK+DL   P+  V   E   +A+      S R SAKTGQ V +AFE+L++ VY  +  R    A P+EA    + L+ P P   + K +CC
Sbjct:    1 MTCAADQQYDELYKVVLVGDPGVGKTNLLAYFTATEDEMAIDSSTNASKIFSAVRKPTIGVEFGTKIITHPNGKRIKAQIWDTAGQERYRAITSSHYRRAAGALIVYDVSSRSTFDNAQSHWLKELRNSADTNSTLLSCLMLVGNKIDLAKDPSVSVVSQEDHDAAISEAGIMSIRASAKTGQNVVEAFEKLVIEVYNQDKARN---AKPEEAPAPSVDLSAPAP--PKKKNNCC 230          
BLAST of mRNA_Ecto-sp13_S_contig850.19899.1 vs. uniprot
Match: A0A024UAY6_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A024UAY6_9STRA)

HSP 1 Score: 223 bits (567), Expect = 4.940e-70
Identity = 121/227 (53.30%), Postives = 160/227 (70.48%), Query Frame = 0
Query:    8 EYDYLFKIVLVGDAAVGKTNLLACYTSQDKRQRPDGTVPS---FRSDRKTTVGVEFATMVVTHPDGKRIKAQIWDTAGQERYRAITSSHYKRASGALLVYDVTSRSSFENAEKVWLRELKNAADSNSSLLDSLVLVGNKVDLPNAD--VTEAEQESSAMRMGLASSARVSAKTGQGVDKAFERLILRVYEVEHGRGQQAAPPKEAAPKGIVLATPKPRAEEDKLDCC 229
            +YD L+K+VLVGD  VGKTNLLA +T+ D+    D +  +   F + RK T+GVEF T ++THP+GKRIKAQIWDTAGQERYRAITSSHY+RA+GAL+VYDV+SR+SF+NA+  WL+EL+N+AD+NS+LL  L+LVGNK+DL  AD  VT  + ES+ +        R SAKTGQ V +AFE+L++ VY  +  R   A P  E  P  + L+ P  + +  K  CC
Sbjct:    7 QYDELYKVVLVGDPGVGKTNLLAYFTASDEDMAIDASTNASKIFSNVRKPTIGVEFGTKIITHPNGKRIKAQIWDTAGQERYRAITSSHYRRAAGALIVYDVSSRTSFDNAQGHWLKELRNSADTNSTLLSCLMLVGNKIDLDPADTVVTPEDHESAVLAADGILDIRASAKTGQNVVEAFEKLVIEVYNQDKARN--ATP--EEKPSALDLSAPVEKKK--KNSCC 227          
BLAST of mRNA_Ecto-sp13_S_contig850.19899.1 vs. uniprot
Match: A0A6S9ECQ7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9ECQ7_HETAK)

HSP 1 Score: 221 bits (563), Expect = 1.750e-69
Identity = 114/188 (60.64%), Postives = 143/188 (76.06%), Query Frame = 0
Query:    6 SLEYDYLFKIVLVGDAAVGKTNLLACYTSQDKRQRPDGTVPSFRSDRKTTVGVEFATMVVTHPDGKRIKAQIWDTAGQERYRAITSSHYKRASGALLVYDVTSRSSFENAEKVWLRELKNAADSNSSLLDSLVLVGNKVDLPNADVT-EAEQESSAMRMGLASSARVSAKTGQGVDKAFERLILRVYE 192
            S +YD ++KIVLVGD  VGKTNLL+C+TS  K    +G V SF  +RK TVGVEFA+ +V HP+G RIKAQIWDTAGQERY AIT SHY+RA+GALLVYDVT+R SF+NA+  WL+ELK +ADS SSLL++ +L GNK+DL +  V  +AEQ S+A  +GL+     SA+ G  VD AFE LIL+VY+
Sbjct:   10 SEQYDVMYKIVLVGDPGVGKTNLLSCFTSYRKDTSENGAVVSFNENRKPTVGVEFASWIVKHPNGDRIKAQIWDTAGQERYNAITKSHYRRAAGALLVYDVTNRKSFDNAKNWWLKELKESADSESSLLENTLLCGNKIDLVDKRVVHDAEQASAAAGLGLSMHQSTSAREGTNVDDAFETLILQVYD 197          
BLAST of mRNA_Ecto-sp13_S_contig850.19899.1 vs. uniprot
Match: A0A485LBE8_9STRA (Aste57867_18857 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LBE8_9STRA)

HSP 1 Score: 220 bits (560), Expect = 1.570e-68
Identity = 121/228 (53.07%), Postives = 158/228 (69.30%), Query Frame = 0
Query:    9 YDYLFKIVLVGDAAVGKTNLLACYTSQDKRQRPDGTVPS---FRSDRKTTVGVEFATMVVTHPDGKRIKAQIWDTAGQERYRAITSSHYKRASGALLVYDVTSRSSFENAEKVWLRELKNAADSNSSLLDSLVLVGNKVDL---PNADVTEAEQESSAMRM-GLASSARVSAKTGQGVDKAFERLILRVYEVEHGRGQQAAPPKEAAPKGIVLATPKPRAEEDKLDCC 229
            YD L+K+VLVGD  VGKTNLLA +T+ D     D +  +   F + RK T+GVEF T ++THP+GKRIKAQIWDTAGQERYRAITSSHY+RA+GAL+VYDV+SR+SF+NA+  WL+EL+N+AD+NS+LL  L+LVGNK+DL   P+  V   E   +A+   G     R SAKTGQ V +AFE+LI+ VY  +  R   A P    A   + L+ P   A++ K +CC
Sbjct:   36 YDELYKVVLVGDPGVGKTNLLAYFTASDDEMAIDTSTNASKIFSNVRKPTIGVEFGTKIITHPNGKRIKAQIWDTAGQERYRAITSSHYRRAAGALIVYDVSSRTSFDNAQSHWLKELRNSADTNSTLLSCLMLVGNKIDLALDPSVQVVAEEDHDAAVAAAGDVLGTRASAKTGQNVVEAFEKLIIEVYNQDKARN--AKPVDVPAAAAVDLSAPA--AQKKKNNCC 259          
BLAST of mRNA_Ecto-sp13_S_contig850.19899.1 vs. uniprot
Match: A0A067CD03_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CD03_SAPPC)

HSP 1 Score: 218 bits (555), Expect = 3.250e-68
Identity = 119/230 (51.74%), Postives = 157/230 (68.26%), Query Frame = 0
Query:    8 EYDYLFKIVLVGDAAVGKTNLLACYTSQDKRQRPDGTVPSFR----SDRKTTVGVEFATMVVTHPDGKRIKAQIWDTAGQERYRAITSSHYKRASGALLVYDVTSRSSFENAEKVWLRELKNAADSNSSLLDSLVLVGNKVDLPN----ADVTEAEQESSAMRMGLASSARVSAKTGQGVDKAFERLILRVYEVEHGRGQQAAPPKEAAPKGIVLATPKPRAEEDKLDCC 229
            +YD L+K+VLVGD  VGKTNLLA +T+ ++    D +  + +    S RK T+GVEF T ++THP+GKRIKAQIWDTAGQERYRAITSSHY+RA+GAL+VYDV+SR++F+NA+  WL+EL+N+AD+NS+LL  L+LVGNK+DL      A V  AE+  +AM        R SAKTG+ V +AFE LI+ VY  +  R   A  P E     +V  T KP  ++    CC
Sbjct:    3 QYDELYKVVLVGDPGVGKTNLLAYFTATEEEMAVDASTNASKIFSSSVRKPTIGVEFGTKIITHPNGKRIKAQIWDTAGQERYRAITSSHYRRAAGALVVYDVSSRATFDNAQTHWLKELRNSADNNSTLLSCLMLVGNKIDLTEGINGAPVVAAEEHDAAMAAAGVHGVRASAKTGENVVQAFENLIIEVYNQDKARNTPA--PMEP----VVDLTAKPPTKKKLPACC 226          
BLAST of mRNA_Ecto-sp13_S_contig850.19899.1 vs. uniprot
Match: A0A1W0A2A3_9STRA (Rab11/RabA-family small GTPase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A2A3_9STRA)

HSP 1 Score: 214 bits (544), Expect = 1.560e-66
Identity = 120/234 (51.28%), Postives = 156/234 (66.67%), Query Frame = 0
Query:    8 EYDYLFKIVLVGDAAVGKTNLLACYTSQDKRQRPDGTVPS---FRSDRKTTVGVEFATMVVTHPDGKRIKAQIWDTAGQERYRAITSSHYKRASGALLVYDVTSRSSFENAEKVWLRELKNAADSNSSLLDSLVLVGNKVDLPNAD-----VTEAEQESSAMRMGLASSARVSAKTGQGVDKAFERLILRVYEVEHGRGQQAAPPKEAAPKGIVLATP----KPRAEEDKLDCC 229
            +YD L+K+VLVGD  VGKTNLLA +T+ ++    D    +   F + RK T+GVEF T ++THP+GKRIKAQIWDTAGQERYRAITSSHY+RA+GAL+VYDVTS+++FENA+  WL+EL+N+ADSNS+LL  L+LVGNK+DL  AD     V   + E++A   G+ +  R SAKTG+ V  AFE+LI+ VY  +  R          AP     ATP      +    K  CC
Sbjct:    3 QYDELYKVVLVGDPGVGKTNLLAYFTATEEEMAMDAETNASKIFSAVRKPTIGVEFGTKIITHPNGKRIKAQIWDTAGQERYRAITSSHYRRAAGALVVYDVTSKATFENAQCHWLKELRNSADSNSTLLSCLMLVGNKIDLVAADNASTIVPPEDHEAAAKAEGVMAM-RASAKTGENVVAAFEQLIIEVYNQDKNR---------TAPVATESATPLVDLNAKVPTKKKSCC 226          
BLAST of mRNA_Ecto-sp13_S_contig850.19899.1 vs. uniprot
Match: A0A024U937_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U937_9STRA)

HSP 1 Score: 212 bits (539), Expect = 2.980e-66
Identity = 109/186 (58.60%), Postives = 143/186 (76.88%), Query Frame = 0
Query:    8 EYDYLFKIVLVGDAAVGKTNLLACYTSQDKRQRPDGTVPS---FRSDRKTTVGVEFATMVVTHPDGKRIKAQIWDTAGQERYRAITSSHYKRASGALLVYDVTSRSSFENAEKVWLRELKNAADSNSSLLDSLVLVGNKVDLPNAD--VTEAEQESSAMRMGLASSARVSAKTGQGVDKAFERLIL 188
            +YD L+K+VLVGD  VGKTNLLA +T+ D+    D +  +   F + RK T+GVEF T ++THP+GKRIKAQIWDTAGQERYRAITSSHY+RA+GAL+VYDV+SR+SF+NA+  WL+EL+N+AD+NS+LL  L+LVGNK+DL  AD  VT  + ES+ +        R SAKTGQ V +AFE+L++
Sbjct:    7 QYDELYKVVLVGDPGVGKTNLLAYFTASDEDMAIDASTNASKIFSNVRKPTIGVEFGTKIITHPNGKRIKAQIWDTAGQERYRAITSSHYRRAAGALIVYDVSSRTSFDNAQGHWLKELRNSADTNSTLLSCLMLVGNKIDLDPADTVVTPEDHESAVLAADGILDIRASAKTGQNVVEAFEKLVI 192          
BLAST of mRNA_Ecto-sp13_S_contig850.19899.1 vs. uniprot
Match: A0A2D4CD76_PYTIN (Rab family, other n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CD76_PYTIN)

HSP 1 Score: 204 bits (519), Expect = 1.070e-62
Identity = 118/233 (50.64%), Postives = 153/233 (65.67%), Query Frame = 0
Query:    8 EYDYLFKIVLVGDAAVGKTNLLACY--TSQDKRQRPD--GTVPSFRSDRKTTVGVEFATMVVTHPDGKRIKAQIWDTAGQERYRAITSSHYKRASGALLVYDVTSRSSFENAEKVWLRELKNAADSNSSLLDSLVLVGNKVDLPNAD-------VTEAEQESSAMRMGLASSARVSAKTGQGVDKAFERLILRVYEVEHGRGQQAAPPKEAAPKGIVLATPKPRAEEDKLDCC 229
            +YD L+K+VLVGD AVGKTNLLA +  T  +K    D  G    F S RK T+GVEF T ++ HP+GKR KAQIWDTAGQERYRAITSSHY+RA+GAL+VYDVT+R+SFENA++ WL+ELK +A  +S+LL+ ++LVGNKVDL           V +   E +A  + + +  R SAKT   V KAFE LI+ +Y  + G+ Q+ A       + I L  PKP  +  K  CC
Sbjct:    5 QYDELYKVVLVGDPAVGKTNLLASFLATEDNKPDTXDDQGQAKGFSSVRKPTIGVEFGTKIIHHPNGKRXKAQIWDTAGQERYRAITSSHYRRAAGALVVYDVTNRTSFENAQQHWLKELKASAXPSSTLLNCIMLVGNKVDLETPQSLQQPDSVPQEAHELAASELKVMNK-RTSAKTAFNVRKAFEELIISIYNEDKGKLQRMA-----TIRSITLEEPKPSGKSAK-QCC 230          
BLAST of mRNA_Ecto-sp13_S_contig850.19899.1 vs. uniprot
Match: A0A7S2XV75_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XV75_9STRA)

HSP 1 Score: 201 bits (511), Expect = 9.590e-62
Identity = 104/184 (56.52%), Postives = 136/184 (73.91%), Query Frame = 0
Query:    9 YDYLFKIVLVGDAAVGKTNLLACYTSQDKRQRPDGTVPSFRSDRKTTVGVEFATMVVTHPDGKRIKAQIWDTAGQERYRAITSSHYKRASGALLVYDVTSRSSFENAEKVWLRELKNAADSNSSLLDSLVLVGNKVDLPNADVTEAEQESSAMRMGLASSARVSAKTGQGVDKAFERLILRVYE 192
            +D  FKIVLVGD  VGKTNLLA YTS  K   P  T   +   RK TVGVEFAT +V HP G RIKAQIWDTAGQERY +I  SHY+RA+GA++VYDVTS+ +FENA++ WL++++++A  +S++++ + LVGNK DL  A+VTEAE +++   +GL    R SAKTG  VD+AFE+LI  VY+
Sbjct:   10 FDEQFKIVLVGDPGVGKTNLLAYYTSYRKGD-PSAT---YNEARKPTVGVEFATWIVRHPSGARIKAQIWDTAGQERYNSIVKSHYRRAAGAIVVYDVTSKKTFENAQRFWLQQIQDSASPDSNIMECITLVGNKTDL-QAEVTEAEHQTAMNSLGLPLEGRTSAKTGDNVDEAFEKLICLVYD 188          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig850.19899.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6B4_ECTSI2.950e-15899.56Rab11B, RAB family GTPase n=1 Tax=Ectocarpus silic... [more]
A0A6G0WZ29_9STRA8.260e-7251.49Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A024UAY6_9STRA4.940e-7053.30Uncharacterized protein n=5 Tax=Aphanomyces TaxID=... [more]
A0A6S9ECQ7_HETAK1.750e-6960.64Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A485LBE8_9STRA1.570e-6853.07Aste57867_18857 protein n=1 Tax=Aphanomyces stella... [more]
A0A067CD03_SAPPC3.250e-6851.74Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A1W0A2A3_9STRA1.560e-6651.28Rab11/RabA-family small GTPase n=1 Tax=Thraustothe... [more]
A0A024U937_9STRA2.980e-6658.60Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A2D4CD76_PYTIN1.070e-6250.64Rab family, other n=1 Tax=Pythium insidiosum TaxID... [more]
A0A7S2XV75_9STRA9.590e-6256.52Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 13..34
score: 46.09
coord: 133..146
score: 46.37
coord: 168..190
score: 30.05
coord: 66..88
score: 52.86
coord: 47..63
score: 28.61
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 10..193
e-value: 3.1E-8
score: 4.5
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 15..193
e-value: 2.7E-11
score: 25.1
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 13..193
e-value: 1.9E-51
score: 186.9
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 18..226
e-value: 0.0011
score: 4.0
NoneNo IPR availableGENE3D3.40.50.300coord: 1..212
e-value: 1.6E-51
score: 176.4
NoneNo IPR availablePANTHERPTHR24073:SF549coord: 10..195
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 10..195
NoneNo IPR availablePROSITEPS51419RABcoord: 8..229
score: 26.879
IPR001806Small GTPasePFAMPF00071Rascoord: 14..190
e-value: 1.9E-40
score: 138.1
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 11..184
e-value: 2.7E-27
score: 93.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 8..192

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig850contigEcto-sp13_S_contig850:11618..14739 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig850.19899.1mRNA_Ecto-sp13_S_contig850.19899.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig850 11618..14739 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig850.19899.1 ID=prot_Ecto-sp13_S_contig850.19899.1|Name=mRNA_Ecto-sp13_S_contig850.19899.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=230bp
MASRSSLEYDYLFKIVLVGDAAVGKTNLLACYTSQDKRQRPDGTVPSFRS
DRKTTVGVEFATMVVTHPDGKRIKAQIWDTAGQERYRAITSSHYKRASGA
LLVYDVTSRSSFENAEKVWLRELKNAADSNSSLLDSLVLVGNKVDLPNAD
VTEAEQESSAMRMGLASSARVSAKTGQGVDKAFERLILRVYEVEHGRGQQ
AAPPKEAAPKGIVLATPKPRAEEDKLDCC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase