mRNA_Ecto-sp13_S_contig85.19892.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_Ecto-sp13_S_contig85.19892.1
Unique Name	mRNA_Ecto-sp13_S_contig85.19892.1
Type	mRNA
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)

Homology

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BLAST of mRNA_Ecto-sp13_S_contig85.19892.1 vs. uniprot
Match: A0A6H5JS43_9PHAE (Alpha-1,6-mannosyl-glycoprotein 6-beta-N-acetylglucosaminyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS43_9PHAE)

HSP 1 Score: 356 bits (913), Expect = 2.520e-119
Identity = 172/181 (95.03%), Postives = 177/181 (97.79%), Query Frame = 1

Query:  721 MFILDYFGSDEPHANLGVPLKRHLTAFPISAEHQRTFLGYRVNHKRNKAPLSKPATKRRQGVIWGKTKDKLFGNRRLILALADMVELHSTVAPEDAFIMHNNIVYHGHLPSDEWNQLLQESKFIIGLGNPLLGPSAVDAVTAGCAYLNPIFLRPEKKIYNSQHPFLAQRVGEPYVCSFEQH 1263
            MFILDYFGSDEPHANLGVPLKRHLTAFPI+AEHQRTFLGY+V+ KRNK PLSKPATKRRQGVIWGKTKDKLFGNRRLILALADMVELHSTVAPEDAFIMH+NIVYHG+LP DEWNQLLQESKFIIGLGNPLLGPSAVDAVTAGCAYLNPIF RPEKKIYNSQHPFLAQRVGEPYVCSFEQH
Sbjct:    1 MFILDYFGSDEPHANLGVPLKRHLTAFPITAEHQRTFLGYQVDPKRNKIPLSKPATKRRQGVIWGKTKDKLFGNRRLILALADMVELHSTVAPEDAFIMHDNIVYHGYLPQDEWNQLLQESKFIIGLGNPLLGPSAVDAVTAGCAYLNPIFFRPEKKIYNSQHPFLAQRVGEPYVCSFEQH 181

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BLAST of mRNA_Ecto-sp13_S_contig85.19892.1 vs. uniprot
Match: A0A7S3UWN5_HETAK (Alpha-1,6-mannosyl-glycoprotein 6-beta-N-acetylglucosaminyltransferase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWN5_HETAK)

HSP 1 Score: 250 bits (639), Expect = 4.160e-76
Identity = 135/314 (42.99%), Postives = 191/314 (60.83%), Query Frame = 1

Query:  442 GKGMRVLIYTMDSIQTTVTKSMKGGPAGEIIIRESLTRTLTEAGVEVEVATSDGDFERRAEAMGMYDAVVVDPWTWAGKGWRLKSQLEDHRGKMFILDYFGSDEPHANLGVPLKRH-LTAFPISAEHQRTFLGYRVNHKRNKAPLSKPATKRRQGVIWGKTKDKLFGNRRLILALADMVELHSTVAPEDAFI-MHNNIVYHGHLPSDEWNQLLQESKFIIGLGNPLLGPSAVDAVTAGCAYLNPIFLRPEKKIYNSQHPFLAQRVGEPYVCSFEQHNAYAAVDCARKALEQDLSPMIPQELTEEAYATRVREIF 1377
            G+  R LI+TMDSI + V  S KGGPAGEI+IR +L   L E G  V+ ATSD +F+R  +    Y  ++VDPWT+A KGW  K+ L      +++L +FG+ +   NL + L+   LTAFP +  +   F+GY        A  +    K+ QGV+WGK    L G   +I A+AD+ ELH+T+  +D    +   +V H HL  + W+ LL ESKF++GL +PLLGPSAVDAV+ GC ++NP++ +P+   Y SQHP++A  VGEPYVC+       +   C +KAL   L P IP++LT+E Y  R+R IF
Sbjct:    7 GRPPRALIFTMDSITSYVEGSRKGGPAGEILIRTALEHGLRELGFAVDTATSDAEFDRLGKQRDDYSVLIVDPWTYAKKGWVPKTPLVGREKDVYVLSFFGT-QGLKNLKIDLRTQVLTAFPTAPHND--FIGYFYTDNSLAARAAAVGKKKPQGVLWGKNAKYLKGKEAVIRAVADLCELHTTIPEKDLPAGLRGALVVHQHLDPNGWHSLLAESKFLLGLEDPLLGPSAVDAVSNGCMFINPVYSKPKLDFYTSQHPYIADTVGEPYVCNTRLQEISSVEKCVQKALGSSLKPFIPKDLTKEQYLIRLRNIF 317

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BLAST of mRNA_Ecto-sp13_S_contig85.19892.1 vs. uniprot
Match: A0A7S3YPU8_9EUKA (Alpha-1,6-mannosyl-glycoprotein 6-beta-N-acetylglucosaminyltransferase n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YPU8_9EUKA)

HSP 1 Score: 222 bits (566), Expect = 1.030e-65
Identity = 123/290 (42.41%), Postives = 174/290 (60.00%), Query Frame = 1

Query:  520 AGEIIIRESLTRTLTEAGVEVEVATSDGDFERRAEAMGMYDAVVVDPWTWAGKGWRLKSQLEDHRGKMFILDYFGSD-EPHANLGVPLKRHLTAFPISAEHQRTFLGYRVNHKRNKAPLSKPATKRRQ-GVIWGKTKDKLFGNRRLILALADMVELHSTVAPEDAFIMHNNIVYHGHLPSDEWNQLLQESKFIIGLGNPLLGPSAVDAVTAGCAYLNPIFLRPEKKIYNSQHPFLAQRVGEPYVCSFE-QHNAYAAVDCARKALEQDLSPMIPQELTEEAYATRVREIFE 1380
            +GE+ IR +L   L   GVE  V  SD +FER  +++  Y  + +DPWTWA +GW++K  L  H  K++ILD+FG D  P  N  VPL RHLTA+P+    + TFLGY +        +S P   R++ GVIWGK      G    +  +A +V L ST AP+DA   H NI   GHL  + W  LL+  KF++GLG+PL+GPSA+DA+ AG  +LNP + +P+   Y SQHPF A+      VC+F+ + +    V+C  KA+ QDL+P +P ELT  +Y  R++ IF+
Sbjct:    2 SGEMTIRLALCDGLAAVGVECHVVRSDSEFEREGKSLDKYSLIFLDPWTWAARGWKMKPFLHGHEQKLYILDFFGGDGHPGLNPTVPLSRHLTAYPVHP--RNTFLGYFLPDA-----VSHPQGNRKKAGVIWGKDPKYYHGKHVFLTKVASIVPLVST-APQDALPAHPNITSVGHLSPEGWEALLRSHKFLLGLGDPLVGPSAIDAIAAGAMFLNPHYRQPKLDHYRSQHPF-AESSTPDSVCAFDLEGSGEDLVECVEKAVGQDLAPSVPTELTAASYMERLKSIFK 282

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BLAST of mRNA_Ecto-sp13_S_contig85.19892.1 vs. uniprot
Match: A0A7S0W0V7_9CRYP (Alpha-1,6-mannosyl-glycoprotein 6-beta-N-acetylglucosaminyltransferase n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0W0V7_9CRYP)

HSP 1 Score: 227 bits (579), Expect = 9.720e-63
Identity = 127/311 (40.84%), Postives = 182/311 (58.52%), Query Frame = 1

Query:  445 KGMRVLIYTMDSIQTTVTKSMKGGPAGEIIIRESLTRTLTEAGVEVEVATSDGDFERRAEAMGMYDAVVVDPWTWAGKGWRLKSQLEDHRGKMFILDYFGSDEPHANLGVPLKRHLTAFPISAEHQRTFLGYRVNHKRNKAPLSKPATKRRQGVIWGKTKDKLFGNRRLILALADMVELHSTVAPEDAFIMHNNIVYHGHLPSDEWNQLLQESKFIIGLGNPLLGPSAVDAVTAGCAYLNPIFLRPEKKIYNSQHPFLAQRVGEPYVCSFEQHNAYAAVDCARKALEQDLSPMIPQELTEEAYATRVREIF 1377
            K  +VLI+TMDS+ T V+ S +GGP+GEI++R++L + L   GV   VA ++  F    +  G Y  +++D WTWA +G + K  L+ H  K+F+LD+FG+    A +     R LTA+P +   + +FLG+ V      AP  K   K RQGVIWGK          ++LALA +  +H T+  E     H NI +HG L SD+W +LL ESK+  GLGNPL GPSA+DA+ AGC Y +P F  P    Y SQ+PFL+ RVG P+VC  +  +      CA  AL   + P+I  + TE+ ++ R+ +IF
Sbjct:  176 KKTKVLIFTMDSLSTRVSASNRGGPSGEIVVRKALAQGLLGFGVSSVVADTESKFTEHMKHAGEYCMIILDLWTWAARGGKAKPFLKPHMKKVFLLDFFGNASTSATV-FGNSRILTAYPTA---RFSFLGWFVKE----APRRK---KLRQGVIWGKQASYFKDRWPVVLALARLSSIHLTIKREKGMPEHENITWHGTLNSDQWFRLLAESKYFAGLGNPLAGPSAIDAIAAGCVYFDPTFKEPPLPTYTSQNPFLSSRVGAPHVCVVQMGSRSEYERCALAALTGSVQPLIVADYTEKEHSERISKIF 475

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BLAST of mRNA_Ecto-sp13_S_contig85.19892.1 vs. uniprot
Match: A0A7S2RPM8_9STRA (Alpha-1,6-mannosyl-glycoprotein 6-beta-N-acetylglucosaminyltransferase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RPM8_9STRA)

HSP 1 Score: 189 bits (479), Expect = 3.510e-54
Identity = 92/164 (56.10%), Postives = 118/164 (71.95%), Query Frame = 1

Query:  889 KRRQGVIWGKTKDKLFGNRRLILALADMVELHSTVAPEDAFIMHNNIVYHGHLPSDEWNQLLQESKFIIGLGNPLLGPSAVDAVTAGCAYLNPIFLRPEKKIYNSQHPFLAQRVGEPYVCSFEQHNAYAAVDCARKALEQDLSPMIPQELTEEAYATRVREIFE 1380
            K+RQGVIWGK      G   L+ ALAD VELH+TV+ +   + H +IVYHGHL  + W  LL ES+F+IGLGNPL+GPSAVDAV AGC Y+NP +  P K++Y+SQHP+LA++VGEPYVC+   ++  A   C  +AL  DL PMIP+ELTE  Y++RV  IFE
Sbjct:   14 KKRQGVIWGKDPKHFMGKEALLKALADEVELHATVSGKP--VKHPSIVYHGHLTPEGWQSLLAESRFMIGLGNPLVGPSAVDAVVAGCMYINPKYSAPVKEVYHSQHPYLAEQVGEPYVCTANLNDVAAVKACVHQALSADLPPMIPRELTEAEYSSRVEAIFE 175

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BLAST of mRNA_Ecto-sp13_S_contig85.19892.1 vs. uniprot
Match: A0A7R9YA05_9STRA (Alpha-1,6-mannosyl-glycoprotein 6-beta-N-acetylglucosaminyltransferase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YA05_9STRA)

HSP 1 Score: 187 bits (475), Expect = 1.270e-51
Identity = 116/323 (35.91%), Postives = 178/323 (55.11%), Query Frame = 1

Query:  454 RVLIYTMDSIQTTVTKSMKGGPAGEIIIRESLTRTLTEAGVEVEVATSDGDFERRAEAMGMYDAVVVDPWTWAGKGWRLKSQLEDHRGKMFILDYFG-SDEPHANLGVPLKRHLTAFPISAEHQRTFLGYRVNHKRNKAPLSKPATKRRQGVIWGKTKDKLFGNRRLIL-ALADMVELHSTVAPEDAFIMHNNIVYHGHLPSDEWNQLLQESKFIIGLGNPLLGPSAVDAVTAGCAYLNPIFLRPEK-----------KIYNSQHPFLAQRVGEPYVCSFEQHNAYAAVDCARKALEQD-LSPMIPQELTEEAYATRVREIFE 1380
            +VL++T DS++   T+     PAGEI +R SL   L + G  V+ AT++ +F   AE    Y A ++DPWTWAG   + +  L+     ++ILDYFG +  P   + V +K  LTAFP+ A++  TF+GY V       PL++   K+ QGV  GK  +     R   L A+AD V++ +T++P +  + H NI + GH   +E++QLL  S+F+I  G+ L  PSA+DAV  GC Y+N ++ +P               Y S+HP+L +RVG PYVC+  +      + C  +A+    L P +P   T+ AY  R+  +FE
Sbjct:   22 KVLLFTTDSMKGYSTRG--NVPAGEIRMRWSLAIALGDLGAVVDTATTEEEFRWLAEQHAAYSAYILDPWTWAGSSRQPREFLQGREDSVYILDYFGRASFPSDGVQVDMKHVLTAFPLPAKN--TFIGYGVEQ-----PLARD--KKTQGVFLGKLHEYSPRYRMETLKAIADKVKIVTTISPGETLLSHPNIEFLGHKTPEEFDQLLATSRFLITFGDTLNEPSAMDAVANGCVYINTVYNKPRSINADLTRGDYGVAYRSEHPYLGERVGPPYVCTAREGELDDYMHCVDEAMRVGPLDPFVPHPFTDSAYRQRISTVFE 333

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BLAST of mRNA_Ecto-sp13_S_contig85.19892.1 vs. uniprot
Match: A0A7S4KE09_GUITH (Alpha-1,6-mannosyl-glycoprotein 6-beta-N-acetylglucosaminyltransferase n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4KE09_GUITH)

HSP 1 Score: 171 bits (432), Expect = 1.080e-43
Identity = 125/358 (34.92%), Postives = 186/358 (51.96%), Query Frame = 1

Query:  454 RVLIYTMDSIQTTVTKSMKGGPAGEIIIRESLTRTLTEAGVEVEVATSDGDFERRA-EAMGM----YDAVVVDPWTW-----AGKGWRLKSQLEDHRGKMFILDYFGSDE---PHANLGVPLKRHLTAFPISAEHQRTFLGYRVNHKRNKAPLSKP--ATKRR-------------------QGVIWGKTKDKLFGNRRLILALADMVELHSTVAP----EDAFIMHNNIVYHGHLPSDEWNQLLQESKFIIGLGNPLLGPSAVDAVTAGCAYLNPIFLR-----PE--KKIYNSQHPFLAQRVGEPYVCSFE-----QHNAYAAVDCARKALEQDLSPMIPQELTEEAYATRVREIF 1377
            RVLI+TMDS++TT+     GGPAGEI +R SL   LT  G +++VA  D  F   + +A+G     Y   ++DPWTW     +G  +R +  L      +FILD+FG+ +      +L  P ++ L+AFP +     +FLG+  +++     LSK   A+K+R                   +GV+WGK  + L   + +I A+ +  EL S +      +  F   +N+   G+   +E+ ++L  SKF++GLG+PL GPSA+DA+  G  YLNP F       PE  K  Y SQHP++A+  G  YVCSF      + +      C  +AL   L P IP+  T E Y +RVR IF
Sbjct:  172 RVLIFTMDSLKTTLEAVKSGGPAGEIFVRTSLETVLTSLGFKIDVADHDMSFAAYSNQALGAKCNYYRFFIMDPWTWIERAPSGMLYRARPILAGRERDVFILDFFGNKQLSLAGVSLNFPTEQRLSAFPTNFG--GSFLGFFYSNQ----TLSKAMEASKKRVVVMNETAGNASSTDGQQLRGVVWGKKPEYLEKGQGIISAVLEKCELVSFLPQMGNLQAKFPRLHNL---GYKTKEEFREILASSKFLLGLGDPLSGPSALDAMMVGAMYLNPSFPNKNSDYPEELKSFYTSQHPYMAEH-GGAYVCSFNMISRSEPDQAQLYQCVERALRSKLEPQIPRHFTREEYESRVRSIF 519

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BLAST of mRNA_Ecto-sp13_S_contig85.19892.1 vs. uniprot
Match: D8LF21_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF21_ECTSI)

HSP 1 Score: 149 bits (376), Expect = 2.940e-40
Identity = 74/77 (96.10%), Postives = 76/77 (98.70%), Query Frame = 1

Query:  451 MRVLIYTMDSIQTTVTKSMKGGPAGEIIIRESLTRTLTEAGVEVEVATSDGDFERRAEAMGMYDAVVVDPWTWAGKG 681
            MRVLIYTMDSIQTTV KSMKGGPAGEIIIRESLTRTLTEAGVEVEVATSDGDFERRAEAMG+Y+AVVVDPWTWAGKG
Sbjct:    1 MRVLIYTMDSIQTTVAKSMKGGPAGEIIIRESLTRTLTEAGVEVEVATSDGDFERRAEAMGVYNAVVVDPWTWAGKG 77

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BLAST of mRNA_Ecto-sp13_S_contig85.19892.1 vs. uniprot
Match: A0A7S2U380_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2U380_9EUKA)

HSP 1 Score: 137 bits (344), Expect = 1.940e-34
Identity = 76/184 (41.30%), Postives = 113/184 (61.41%), Query Frame = 1

Query:  460 LIYTMDSIQTTVTKSMKGGPAGEIIIRESLTRTLTEAGVEVEVATSDGDFERRAEAMGMYDAVVVDPWTWAGKGWRLKSQLEDHRGKMFILDYFGSD-EPHANLGVPLKRHLTAFPISAEHQRTFLGYRVNHKRNKAPLSKPATKRRQGVIWGKTKDKLFGNRRLILALADMVELHSTVAPEDA 1008
            L++TMDSIQ+ + +S +GG +GE+ IR +L   L   GV+  VA SD +FER  +++  Y  + +DPWTWA +GW++K  L  H  K++ILD+FG D  P  N  VPL+RHLTA+P+    + TFLGY +    + AP+     +++ GVIWGK      G +  +  +A +  L ST AP+ A
Sbjct:   11 LVFTMDSIQSRIDESKRGGASGEMTIRLALCDGLAAVGVKCYVARSDSEFEREGKSLDKYVLIFLDPWTWAARGWKMKPFLLGHEQKLYILDFFGGDGHPALNPTVPLQRHLTAYPVHP--RNTFLGYFLP---DAAPVR--GKRKKAGVIWGKDPKYYQGKQSFLTKVASVAPLVST-APQSA 186

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BLAST of mRNA_Ecto-sp13_S_contig85.19892.1 vs. uniprot
Match: A0A7S3UVM7_HETAK (Alpha-1,6-mannosyl-glycoprotein 6-beta-N-acetylglucosaminyltransferase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVM7_HETAK)

HSP 1 Score: 129 bits (323), Expect = 6.780e-32
Identity = 58/117 (49.57%), Postives = 80/117 (68.38%), Query Frame = 1

Query: 1027 IVYHGHLPSDEWNQLLQESKFIIGLGNPLLGPSAVDAVTAGCAYLNPIFLRPEKKIYNSQHPFLAQRVGEPYVCSFEQHNAYAAVDCARKALEQDLSPMIPQELTEEAYATRVREIF 1377
            +V H HL  + W+ LL ESKF++GL +PLLGPSAVDAV+ GC ++NP++ +P+   Y SQHP++A  VGEPYVC+       +   C +KAL   L P IP++LT+E Y  R+R IF
Sbjct:   28 LVVHQHLDPNGWHSLLAESKFLLGLEDPLLGPSAVDAVSNGCMFINPVYSKPKLDFYTSQHPYIADTVGEPYVCNTRLQEISSVEKCVQKALGSSLKPFIPKDLTKEQYLIRLRNIF 144

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig85.19892.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig85.19892.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JS43_9PHAE	2.520e-119	95.03	Alpha-1,6-mannosyl-glycoprotein 6-beta-N-acetylglu...	[more]
A0A7S3UWN5_HETAK	4.160e-76	42.99	Alpha-1,6-mannosyl-glycoprotein 6-beta-N-acetylglu...	[more]
A0A7S3YPU8_9EUKA	1.030e-65	42.41	Alpha-1,6-mannosyl-glycoprotein 6-beta-N-acetylglu...	[more]
A0A7S0W0V7_9CRYP	9.720e-63	40.84	Alpha-1,6-mannosyl-glycoprotein 6-beta-N-acetylglu...	[more]
A0A7S2RPM8_9STRA	3.510e-54	56.10	Alpha-1,6-mannosyl-glycoprotein 6-beta-N-acetylglu...	[more]
A0A7R9YA05_9STRA	1.270e-51	35.91	Alpha-1,6-mannosyl-glycoprotein 6-beta-N-acetylglu...	[more]
A0A7S4KE09_GUITH	1.080e-43	34.92	Alpha-1,6-mannosyl-glycoprotein 6-beta-N-acetylglu...	[more]
D8LF21_ECTSI	2.940e-40	96.10	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A7S2U380_9EUKA	1.940e-34	41.30	Hypothetical protein n=1 Tax=Lotharella oceanica T...	[more]
A0A7S3UVM7_HETAK	6.780e-32	49.57	Alpha-1,6-mannosyl-glycoprotein 6-beta-N-acetylglu...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig85	contig	Ecto-sp13_S_contig85:4528..9734 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Stop	1
Start	1
Seed ortholog score	150.6
Seed ortholog evalue	1.8e-33
Seed eggNOG ortholog	2880.D8LF21
Model size	1432
Hectar predicted targeting category	signal peptide
Exons	7
EggNOG OGs	2F12H@1,2T24T@2759
Ec32 ortholog description	Glycosyltransferase family 18
Ec32 ortholog	Ec-21_006420.1
Cds size	1407
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig85.19892.1	prot_Ecto-sp13_S_contig85.19892.1	Ectocarpus species13 EcNAP12_S_4_19m	polypeptide	Ecto-sp13_S_contig85 4528..9709 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1681464119.7040863-CDS-Ecto-sp13_S_contig85:4527..5106	1681464119.7040863-CDS-Ecto-sp13_S_contig85:4527..5106	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig85 4528..5106 +
1681464119.7232053-CDS-Ecto-sp13_S_contig85:5789..5889	1681464119.7232053-CDS-Ecto-sp13_S_contig85:5789..5889	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig85 5790..5889 +
1681464119.7395217-CDS-Ecto-sp13_S_contig85:6661..6836	1681464119.7395217-CDS-Ecto-sp13_S_contig85:6661..6836	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig85 6662..6836 +
1681464119.7551117-CDS-Ecto-sp13_S_contig85:7473..7635	1681464119.7551117-CDS-Ecto-sp13_S_contig85:7473..7635	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig85 7474..7635 +
1681464119.777762-CDS-Ecto-sp13_S_contig85:7963..8049	1681464119.777762-CDS-Ecto-sp13_S_contig85:7963..8049	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig85 7964..8049 +
1681464119.7912211-CDS-Ecto-sp13_S_contig85:8873..9034	1681464119.7912211-CDS-Ecto-sp13_S_contig85:8873..9034	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig85 8874..9034 +
1681464119.8029149-CDS-Ecto-sp13_S_contig85:9565..9709	1681464119.8029149-CDS-Ecto-sp13_S_contig85:9565..9709	Ectocarpus species13 EcNAP12_S_4_19m	CDS	Ecto-sp13_S_contig85 9566..9709 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1681464119.8144906-UTR-Ecto-sp13_S_contig85:9709..9734	1681464119.8144906-UTR-Ecto-sp13_S_contig85:9709..9734	Ectocarpus species13 EcNAP12_S_4_19m	UTR	Ecto-sp13_S_contig85 9710..9734 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at Ecto-sp13_S_contig85:4528..9734+
coding sequence from alignment at Ecto-sp13_S_contig85:4528..9734+

protein sequence of mRNA_Ecto-sp13_S_contig85.19892.1

>prot_Ecto-sp13_S_contig85.19892.1 ID=prot_Ecto-sp13_S_contig85.19892.1|Name=mRNA_Ecto-sp13_S_contig85.19892.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=469bp
MARPHGQPARGALNVISSLLLYLTVGRLLFVLRPGWNPSRNQQPKIDQLG
QGPPAHGYHHRRTTSKKTAYSAGRRGEAMPAELEMHLSNNLHGSGGSDHF
PVFGDPRSVAPPGDRRDSVGGFRVSNHGSSGIGGASHTGLDHRGFVWGKG
MRVLIYTMDSIQTTVTKSMKGGPAGEIIIRESLTRTLTEAGVEVEVATSD
GDFERRAEAMGMYDAVVVDPWTWAGKGWRLKSQLEDHRGKMFILDYFGSD
EPHANLGVPLKRHLTAFPISAEHQRTFLGYRVNHKRNKAPLSKPATKRRQ
GVIWGKTKDKLFGNRRLILALADMVELHSTVAPEDAFIMHNNIVYHGHLP
SDEWNQLLQESKFIIGLGNPLLGPSAVDAVTAGCAYLNPIFLRPEKKIYN
SQHPFLAQRVGEPYVCSFEQHNAYAAVDCARKALEQDLSPMIPQELTEEA
YATRVREIFEPLIVTSPE*

mRNA from alignment at Ecto-sp13_S_contig85:4528..9734+

Legend: polypeptideCDSUTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_Ecto-sp13_S_contig85.19892.1 ID=mRNA_Ecto-sp13_S_contig85.19892.1|Name=mRNA_Ecto-sp13_S_contig85.19892.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5207bp|location=Sequence derived from alignment at Ecto-sp13_S_contig85:4528..9734+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCGCGACCACATGGACAGCCCGCACGTGGCGCGCTGAACGTCATATC
GTCCCTGTTGCTGTATCTTACTGTAGGAAGGCTGCTCTTCGTTCTTCGCC
CCGGTTGGAATCCTTCCCGAAATCAACAGCCGAAGATTGATCAACTTGGA
CAGGGACCTCCTGCGCACGGGTACCACCACCGCAGGACTACCAGCAAGAA
GACGGCATATAGTGCTGGCCGGCGTGGTGAAGCAATGCCCGCAGAGCTGG
AGATGCATCTTTCGAATAACTTGCATGGGAGCGGCGGATCCGATCATTTC
CCGGTGTTCGGAGATCCACGGTCCGTCGCGCCTCCCGGGGATCGGAGAGA
TAGTGTAGGGGGTTTCAGGGTGAGCAATCATGGAAGCAGTGGCATTGGTG
GAGCAAGTCACACTGGTCTTGACCATAGAGGGTTTGTTTGGGGAAAGGGG
ATGCGGGTACTGATCTACACGATGGACTCGATCCAAACGACAGTGACAAA
GAGCATGAAGGGTGGACCAGCCGGAGAGATCATCATTCGTGAGAGCTTGA
CAAGGACATTGACGGAAGCTGGCGTTGAGGTAGGAACAAGATTTTCGCCT
GCACATAAGTGATAATGTCATATTTGCCCCTTTGAATGTATTTCATGGCT
GCTTTTACTTTTCGGACAAAGGCAGCCGATGCACAAGGAGTGACCTGCTT
CAACCGTGTTTAATGCAGGCTTCACAGCCAACCGTGTTTCATGAAGGCTT
CACAACAAAATCATGTGTGTCTGAATTTGTCGACCGTCGATCGATCTGTA
AGTGTGCTGAATGGATTTCAGAACACTTGAAGAATTCGATTACCTAAACA
ACATGTTGGTAGGAATCTTGGGCAGTCTATCTAGTAATCTTGTGGTACTT
GGCGTGTTTTGTGAGATTGTGCGACGTTGAGGTTGAATGCTCGATCGGTT
CATCCTGTGCTGTATCCCGAGAAGCATTGGGTAGACTACATACATCGCCG
GAAGGGTGTGACGGCCATCGTGATGAGCTTCATGTCAATGTGTTAAGTGT
GCTTGGAGCCATGGGTGTTGCCCCGGTGTACTGCTTTCCCCGCAAAGTCT
TGCCCAAATAGTTCATGCGCTACGGCTGTATACTCCCCACTTGCGCTTGA
GTGCCGTTGTCGAAAGGTTTCCATCGCTCCGAAGCGCGGTGGTTCACCGT
CTGTAGCATTCGATATCCAACGTTTTTTTTTGCGCTCGTCTATATAATCT
GCACCCTTTAAGGTGGAGGTAGCTACGTCTGATGGTGACTTTGAACGACG
AGCCGAGGCAATGGGTATGTACGACGCAGTTGTTGTCGACCCTTGGACCT
GGGCAGGAAAGGGTAAGGCGAGACAGTGGAGATCATGCGAGACACCGGGT
ACCACGTTGCAAGTAGGTTACGCCTAGCGTGTTTTGAGGTCTGACTCTCG
TTCGGATTTGAGTGCTACTGGAATCAGATGATGTGGGTGCGGCAATTGCC
CGGACAACACTATTGTGTATGACCAGATTTTACCATAGTATAGGGAACTA
TGTATCGAAGGAAATAATCGTTTCTTGGACTTCTGTGCTGAGGACAACGA
TGGTTGTTGGAGGCTGGTGACGTCTATGTCATCAGGAGGCGTCGTCTTGG
CAATTCCTGTCCACAAATAGCTACAAAGACTACGGTACGTGTTTCCGGTG
AATGAAATACTGGCCAAGGAAGTACTTTCTTGTCGCAGAAATATAGCCAC
GCGCCCGTCATCGCCATTGTGTCGTTGTTATTGTTGGCGTTGCGGTCGTC
GTTGTCGGTGTCGTTGTCTTCACACAAGCATCGTTCGGGCTCCACCCAGG
CCCCCCTGTACCCTTCATGAACAACACAGCTATCTATGCTAATTTCCGTA
TCCGCGGGCGAGGCTATCCCCCTTCACACCCTACAGGTGGGCTTTGCGTA
TAGACCTACAAGTGTGCTCGAGCGATGCGATCCAGCTCCATGAATTTTCT
CATGAATCGTTTATTTTGGTCCTGACAGATCATGGGATAGTATACCAATG
AAGACTGATCAGCCGTTTACTCCCCATATAGAGCGTCTCTTCTTCATCGT
CTGTCCTGAATTCCCATCTCGTGGCACAACCCAGGTTGGCGACTAAAGTC
CCAGCTCGAAGACCATCGGGGCAAGATGTTCATTCTAGACTATTTCGGCT
CGGACGAGCCTCATGCCAACTTGGGAGTGCCGCTAAAGCGACACCTTACA
GCGTTTCCGATATCGGCGGAGCACCAGCGGACATTTCTGGGGTATCGAGT
GAATCATAAGTGAGCTGTATGCAGAGGTTGGCGGGGAATAATTTTCCTGC
CGGCTTCCCAGAATCGTTTCCTGGATTATTCTTGAAAGAATAGTTCAATG
AGCAGGTTCATAGAATAGACCCTTCACAAAACTCGGCGAAAATCTTGGCA
ATGGCAAGCCCAATGTAGAGAATGAAAACGCCTCGAAGATCCAAAACCCA
TTTGTGACACCTCATCCTGGGCTATGATTCTGTGGATCACGACAACCGCC
TAATGTATCCATCGTCGTTCGGATGTTCAAGCGTTTCTGAAGATATACGG
TTGGGCTTTGGCACTATCCACATGGTTGGGTTATGGTAGTGGTGTATTTC
CAGTCGTTGGGGAAACGATGTTACTGTAGCATCACGTTGTCAATACTCAC
CATGAAGGTTTGGTGGGCGGCATCAAGATTGCAGTTGATCTCTTTCCGTA
CGACCGCAGACTGCACTATCCACCCCACGAACAGTTTTGAATGTGTAGCA
GTTTGTGGGCTGGCTGTGCTGACGTTTGTCGAGCTACCGTGGCTTGGCTC
GACGCAGTACCGCACTGCGATCCCCGCTGGTATCCTCTTGGCATTTTCTA
TCTGCCTTTGCCATTGCGCGCCACTTTCATCCTTCGGCCTAATCAGACGA
AACAAGGCACCTTTGAGTAAACCGGCGACAAAGCGACGGCAAGGAGTCAT
CTGGGGTAAGACAAAGGACAAGCTCTTCGGAAATAGAAGACTCATCCTAG
CCCTCGCCGACATGGTAGAGCTTCATTCAACCGTTGCGCCTGAGGACGCG
TTCATCATGTAAGCATGCTCCCTTCGTTGTAGAACGAACTCTTCGATATA
GACTTGATCTGACCCAGCATTCGTCTAGAAGAGTGCCCGCAGGTGGGCGT
TTGGTCAAGCAGCGGTTGAGTTCAGGGCATCCTCTTCTACCTAGTAGAAT
ACATGCGTCGGTCAGGAAGGCATGACGCCACTGCTGTGCAGTTGGTGTAT
CGCTTTGCCCGCTTGTTCACTGACGGACCTGTCACAGAAGGATGTCCTTG
GGTGTGCAAAAATCCGCTTACTCCATTCACTGGCCTTATTCCTAAAGTTT
GAGTGACGATGTTCACTGCATTCGATTCCTCGGCAGGCATAACAACATCG
TATACCACGGCCATCTCCCCTCAGACGAGTGGAATCAGTTGCTACAGGAG
TCAAAGTTCATCATCGGCCTAGGTGAGCCCTTTCGCAGCCAGACGTGTAT
GCTTGAAACCAGCCGTTGCCCTAACAGCCCATCCACGGCAAAACGTTAAG
GTCCGTCCATGATCTTTTCATCTTCGGAGTTCCTCAGCTGAAGAACGTGC
CCATACTCTCGAAACATTGTGAAAAACTTGGAAACGCTACCACTGATCCG
CCCAGCCCTTCCATGAAAGTCACGTGCTGATCGAGGTAACTCCTTACTTT
TTGGCCCTTGGAAGGTTTGGTGCACCCCTATCGTTGCACCAGTCGAATCA
CGTGTACTTATGGCGTATTCTCAAGATACCGTTGTTGTAACCCTGAGCGA
TCTTCGTGGTTACGGATGTAATAGCACTCGCGAGGCCAACCCGGATCCAA
TCGCTCTGTCGAGACCTTCACCGTCAGCTTCGCAAGACACAACATTACTG
GGAGATTTTTTATGAAAGTTAACATAGCCTCACAGAAAGAGTGCCCGTTC
GAGATGTAACCTCAGTCGAAAGGGATGTGTTGAAGTTTTTTCAGCACGGT
GGATTGAAACCGACAGGAAACTGGGCTAATTTTGAGTTTGTGTAAGCCTA
TACACTGAGTTATATCAATCAGTGATGCCAGTTGGCGCTTAGAACAAAAT
CATCTGTATAGGTGGATACAGTCTTAACACATCCCCTGTAGTTCGATACT
GGGTCGACGACAGAACTATCGGGGAGAAGCTCTTGTCCATGGACCCACTG
ACCATCAGTCCGTGGACCCCCTGACCATCAAGTTTACCACCGATATCTTC
GCTGGTGCCACCTCAATCTCTATCTTCTTTTCGGCACGGGATTCAGGGAA
CCCGCTATTGGGCCCATCCGCCGTGGATGCCGTGACAGCCGGGTGCGCCT
ACCTTAACCCTATTTTCTTAAGGCCGGAGAAGAAGATCTACAACTCTCAA
CACCCATTCCTGGCACAACGCGTCGGAGAGCCATACGTGTGCTCCTTCGA
ACAGCATGTAAGGCTGCGAGGCTACTGCTGAAACCCGGTACTTCTGTTTA
AGACATTTCCCTTGTTCGATCGCATTTGCCGACGGTCGTGTCCTCAATTC
CGATACTTGACTCGAAACCTGAGGCTTCTCGTCTCTTGCGTAGGGAAGTC
AAGTACCTTTTTGTCTTGCAACAGTTCTACCGTTGGCAGTATGAACCTTT
GTGTGTACGTTGACGTGACGATTGCATTCTGAGCAGTGTTTCACTAGTTT
TTGCGTATCGCGCATTTTAGCGGGGTCAGCACGTAGCACGTAGAAACCAT
CACTAACGAAAACGAAACAGGTATTGGGCCTCCTGTTGCCCCACGTCGGT
GTCAAGTGTTCAGCCGCCCTGAGTGGCATTGGGAGCTATGGGTGCCTACC
ATTACCCAAAAGAAGTGGCCCTTTCTGGCCTTCATTATTGCTTGCCATTC
CTTCTCTACGTGGTTCTTCAGCAACCCGAGGTGGTTCCCATGAGCCATTG
GTATCCGTCTTACCTCAAATGTTTTCGTTTCAACACAGAATGCCTATGCG
GCAGTGGACTGCGCCCGCAAAGCATTGGAGCAGGATCTGTCGCCGATGAT
ACCGCAAGAGCTCACTGAGGAGGCTTACGCTACACGAGTCAGAGAAATTT
TCGAGCCTTTGATTGTGACGTCACCAGAATGACAATACCCCGGAGTGGTA
GCGCCAC

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig85:4528..9734+

>mRNA_Ecto-sp13_S_contig85.19892.1 ID=mRNA_Ecto-sp13_S_contig85.19892.1|Name=mRNA_Ecto-sp13_S_contig85.19892.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1407bp|location=Sequence derived from alignment at Ecto-sp13_S_contig85:4528..9734+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCGCGACCACATGGACAGCCCGCACGTGGCGCGCTGAACGTCATATC
GTCCCTGTTGCTGTATCTTACTGTAGGAAGGCTGCTCTTCGTTCTTCGCC
CCGGTTGGAATCCTTCCCGAAATCAACAGCCGAAGATTGATCAACTTGGA
CAGGGACCTCCTGCGCACGGGTACCACCACCGCAGGACTACCAGCAAGAA
GACGGCATATAGTGCTGGCCGGCGTGGTGAAGCAATGCCCGCAGAGCTGG
AGATGCATCTTTCGAATAACTTGCATGGGAGCGGCGGATCCGATCATTTC
CCGGTGTTCGGAGATCCACGGTCCGTCGCGCCTCCCGGGGATCGGAGAGA
TAGTGTAGGGGGTTTCAGGGTGAGCAATCATGGAAGCAGTGGCATTGGTG
GAGCAAGTCACACTGGTCTTGACCATAGAGGGTTTGTTTGGGGAAAGGGG
ATGCGGGTACTGATCTACACGATGGACTCGATCCAAACGACAGTGACAAA
GAGCATGAAGGGTGGACCAGCCGGAGAGATCATCATTCGTGAGAGCTTGA
CAAGGACATTGACGGAAGCTGGCGTTGAGGTGGAGGTAGCTACGTCTGAT
GGTGACTTTGAACGACGAGCCGAGGCAATGGGTATGTACGACGCAGTTGT
TGTCGACCCTTGGACCTGGGCAGGAAAGGGTTGGCGACTAAAGTCCCAGC
TCGAAGACCATCGGGGCAAGATGTTCATTCTAGACTATTTCGGCTCGGAC
GAGCCTCATGCCAACTTGGGAGTGCCGCTAAAGCGACACCTTACAGCGTT
TCCGATATCGGCGGAGCACCAGCGGACATTTCTGGGGTATCGAGTGAATC
ATAAACGAAACAAGGCACCTTTGAGTAAACCGGCGACAAAGCGACGGCAA
GGAGTCATCTGGGGTAAGACAAAGGACAAGCTCTTCGGAAATAGAAGACT
CATCCTAGCCCTCGCCGACATGGTAGAGCTTCATTCAACCGTTGCGCCTG
AGGACGCGTTCATCATGCATAACAACATCGTATACCACGGCCATCTCCCC
TCAGACGAGTGGAATCAGTTGCTACAGGAGTCAAAGTTCATCATCGGCCT
AGGGAACCCGCTATTGGGCCCATCCGCCGTGGATGCCGTGACAGCCGGGT
GCGCCTACCTTAACCCTATTTTCTTAAGGCCGGAGAAGAAGATCTACAAC
TCTCAACACCCATTCCTGGCACAACGCGTCGGAGAGCCATACGTGTGCTC
CTTCGAACAGCATAATGCCTATGCGGCAGTGGACTGCGCCCGCAAAGCAT
TGGAGCAGGATCTGTCGCCGATGATACCGCAAGAGCTCACTGAGGAGGCT
TACGCTACACGAGTCAGAGAAATTTTCGAGCCTTTGATTGTGACGTCACC
AGAATGA