mRNA_Ecto-sp13_S_contig849.19882.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig849.19882.1
Unique NamemRNA_Ecto-sp13_S_contig849.19882.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig849.19882.1 vs. uniprot
Match: A0A6H5L771_9PHAE (P4Hc domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L771_9PHAE)

HSP 1 Score: 699 bits (1804), Expect = 3.270e-246
Identity = 360/381 (94.49%), Postives = 369/381 (96.85%), Query Frame = 3 
Query:    3 MIPEFAECLTKAIAQDLAKKETEANKSMRMLEVVGDRARNYTCADPEMETTNSSLPSVKWQDPEGGLTYNAQVFLDDPAAKIYLVDNFATDKECKALMDHASPHLQDATVNGGAGKTTLSQARRAKAGGVGADLNNKNSVTAPLYRRGYGFANHVTGYNLDMDGQEGFSVIKYGSDDEYRPHCDGDCTGTEFRPGGRVATMVIYCEQATVGGGTTFSSSDVFINGKEGQAAFFSYLGPDNKTDKGRTRHSGCPIIEGTKWIATLWMRMGVTAEKSWQHYDPSGLPSAYALAQAKSGVSATDAASVEAQHSAVDGNQPDSTHPVSSATTVTQKEQEGDASVNDXXXXXXXXXXXXXXXXXXXEVQEEGYLSGITGSLSGWFS 1145
            M+PEFAECLTKAIAQDLAKKETEANKSMRMLEVVGDRARNYTCADP+M+TTNSSLPSV+W+DPEGGLTYNAQVFLDDPAAKIYL+DNFATDKECKALMDHASPHLQDATVNGGAGKTTLS ARRAKAGGVGADLNNKNSVTAPLYRRGYGFANHVTGYNLDMDGQEGFSVIKYGSDDEYRPHCDGDCTGTEFRPGGRVATMVIYCEQATVGGGTTFSSSDVFINGK+GQAAFFSYLGPDNKTDKGRTRHSGCPIIEGTKWIATLWMRMGVTAEKSWQ+YDPSGLPSAYALAQAKSGVSATDAA+VEAQHSAVDGNQPDST PVSSATTVTQKEQEGDASVN  XXXXXXXXXX        EVQEEGYLSGITGSLSGWFS
Sbjct:  178 MVPEFAECLTKAIAQDLAKKETEANKSMRMLEVVGDRARNYTCADPKMDTTNSSLPSVQWKDPEGGLTYNAQVFLDDPAAKIYLLDNFATDKECKALMDHASPHLQDATVNGGAGKTTLSNARRAKAGGVGADLNNKNSVTAPLYRRGYGFANHVTGYNLDMDGQEGFSVIKYGSDDEYRPHCDGDCTGTEFRPGGRVATMVIYCEQATVGGGTTFSSSDVFINGKKGQAAFFSYLGPDNKTDKGRTRHSGCPIIEGTKWIATLWMRMGVTAEKSWQYYDPSGLPSAYALAQAKSGVSATDAATVEAQHSAVDGNQPDSTSPVSSATTVTQKEQEGDASVN--XXXXXXXXXXDSAAGAAAEVQEEGYLSGITGSLSGWFS 556
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BLAST of mRNA_Ecto-sp13_S_contig849.19882.1 vs. uniprot
Match: A0A835YYR1_9STRA (Fe2OG dioxygenase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYR1_9STRA)

HSP 1 Score: 284 bits (727), Expect = 2.010e-84
Identity = 158/338 (46.75%), Postives = 202/338 (59.76%), Query Frame = 3 
Query:   12 EFAECLTKAIAQDLAKKET----------------EANKSMRMLEVVGDRARNYTCADPEMETTNSSLPSVKWQDPEGGLTYNAQVFLDDPAAKIYLVDNFATDKECKALMDHAS------------------------------------PHLQDATVNGGAGKTTLSQARRAKAGGVGADLN---NKNSVTAPLYRRGYGFANHVTGYNLDMDGQEGFSVIKYGSDDEYRPHCDGDCTGTEFRPGGRVATMVIYCEQATVGGGTTFSSSDVFINGKEGQAAFFSYLGPD-NKTDKGRTRHSGCPIIEGTKWIATLWMRMGVTAEKSWQHYDPSGLP 857
            E  +C++  +A ++A K +                E  K  +M+++VGDR RNYTC DP+M+TT  +L ++ W   +      A VFL++P +KI LVDNFA++ EC AL+   +                                      L+ ATVNG  G   LS +RRAKAG     L+    ++ +T  LYRRGY FAN  TGY++ +DGQE FSVIKY + DEY PHCDGDCTG  ++PGGR+ATMV+YC  A  GGGTTFS+ DVFINGK GQAAFF+Y   + N TD GRTRHSGCPII GTKWIATLWMR GV+  KS+ H+DP G P
Sbjct:  161 ELLDCMSNMLATEVAPKASHRCRKLKFIGYFEEDHELAKQRKMMDIVGDRLRNYTCVDPQMKTTEKALRTITWDGRK------ASVFLEEPDSKIILVDNFASEAECDALIAAGTRTLTTHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEVATVNGATG-ADLSISRRAKAGVASPKLSLAEGEDPIT-DLYRRGYRFANDQTGYDMPLDGQEKFSVIKYDATDEYIPHCDGDCTGAPYKPGGRIATMVVYCGAAEFGGGTTFSNVDVFINGKRGQAAFFAYYDKERNVTDSGRTRHSGCPIISGTKWIATLWMRNGVSKAKSYMHFDPEGRP 490
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BLAST of mRNA_Ecto-sp13_S_contig849.19882.1 vs. uniprot
Match: A0A836CGT5_9STRA (P4Hc domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGT5_9STRA)

HSP 1 Score: 264 bits (674), Expect = 1.570e-77
Identity = 137/270 (50.74%), Postives = 176/270 (65.19%), Query Frame = 3 
Query:   63 ETEANKSMRMLEVVGDRARNYTCADPEMETTNSSLPSVKWQDPEGGLTYNAQVFLDDPAAKIYLVDNFATDKECKALMDHASPHLQDATVNGGAGKTTL--SQARRAKAGGVGADLNNK--NSVTAPLYRRGYGFANHVTGYNLDMDGQEGFSVIKYGSDDEYRPHCDGDCTGTEFRPGGRVATMVIYCEQATVGGGTTFSSSDVFINGKEGQAAFFSYLGPDN-KTDKGRTRHSGCPIIEGTKWIATLWMRMGVTAEKSWQHYDPSGLP 857
            + E +K  +M+  VG+R RNYTC DP+METT   L + KW        +  +VFL++  ++I L+DNF +D EC AL+   +  L+ ATV   AG+T    S ARRA AG    + + K  +     LYRR Y FAN  TGY + ++GQE FSVIKY + DEY  HCDG C G  ++ GGRVATMV+YCE A  GGGTTF++ DVF+ GK+GQA FFSY   +  + D GRTRHSGCP+IEGTKWIATLWMR GV+    W+ +DP G P
Sbjct:  170 DKELSKQYKMMNEVGERVRNYTCIDPKMETTEPPLRTTKWSG------HAVKVFLEESDSQIMLIDNFVSDAECDALIAAGTDTLEAATV---AGQTQRDKSAARRAMAGIAEPNHSAKPGDDPVTDLYRRAYKFANDQTGYKMAVEGQENFSVIKYDTTDEYISHCDGGCNGGPYKLGGRVATMVMYCEAAKAGGGTTFANVDVFVKGKKGQAVFFSYYDSEKERVDNGRTRHSGCPVIEGTKWIATLWMRKGVSKSVPWERFDPQGRP 430
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BLAST of mRNA_Ecto-sp13_S_contig849.19882.1 vs. uniprot
Match: A0A7S1GMS7_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GMS7_CYCTE)

HSP 1 Score: 216 bits (551), Expect = 3.880e-60
Identity = 116/294 (39.46%), Postives = 169/294 (57.48%), Query Frame = 3 
Query:    3 MIPEFAECLTKAIAQDLAKKETEANKSMRMLEVVGDRARNYTCADPEMETTNSSLPSVKWQDPEGGLTYNAQVFLDDPAAKIYLVDNFATDKECKALMDHASPHLQDATVNGGAGKTTLSQARRAKAGGVGA--DLNNKNSVTAPLYRRGYGFANHVTGYNLDMDGQEGFSVIKY---GSDD----EYRPHCDGDCTGTEFRPGGRVATMVIYCEQATVGGGTTFSSSDVFINGKEGQAAFFSYLGPDNKT-DKGRTRHSGCPIIEGTKWIATLWMRMGVTAEKSWQHYDPSGL 854
            ++ + AEC++  + Q+      E +   ++ + +G+   NYTCADP + ++ + L +  W D     T+  +V LD PA+KI++V+NF +D +C A+   A+  L  A V  G+G   LS  RRA   G+    +  N+    A + R+ Y + NHVTG+N+D  GQE    I+Y   G DD    +Y+PHCDG+CTG   + G RVAT+V+YC  A VGG T F ++ V +NGK G A FFSY+  D    D G T HSGCP++ G K I T W+R GVT E  W  Y+  G+
Sbjct:   92 VLEDVAECMSDMVTQEFTGIADEISFQAQVRKKMGEHYENYTCADPSLPSSPAEL-NTTWYDKRTRSTHPVKVMLDRPASKIHVVENFISDAQCNAMEAAANGRLMKAVVADGSGGHDLSDHRRALQAGIRVKWEKENEGDPIATISRKVYDYVNHVTGFNIDEKGQEDLMSIQYFGRGLDDTEPDQYKPHCDGECTGDPHKNGTRVATIVMYCTVAEVGGATNFRNAGVHVNGKRGSAVFFSYMDSDTHIMDSGFTEHSGCPVLVGEKKIVTQWVRHGVTEEIPWNRYNSLGI 384
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BLAST of mRNA_Ecto-sp13_S_contig849.19882.1 vs. uniprot
Match: A0A812U7S5_SYMMI (P4ha1 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812U7S5_SYMMI)

HSP 1 Score: 209 bits (533), Expect = 9.660e-60
Identity = 106/219 (48.40%), Postives = 137/219 (62.56%), Query Frame = 3 
Query:  201 LTYNAQVFLDDPAAKIYLVDNFATDKECKALMDHASPHLQDATVNGGAGKTTLSQARRAKAGGVGADLNNKNSVTAPLYRRGYGFANHVTGYNLDMDGQEGFSVIKYGSDDEYRPHCDGDCTGTEFRPGGRVATMVIYCEQATVGGGTTFSSSDVFINGKEGQAAFFSYLGPDNKTDKGRTRHSGCPIIEGTKWIATLWMRMGVTAEKSWQHYDPSGLP 857
            LT N  V LD  AAKI+ V++F TD+ECK L  H  P L  ATV G  G  T+SQ+R+A+      + + ++     LY R + F      YNLD  GQEGF++I+Y  DD+Y PHCDG C G++  P GRVAT V+YC+    GGGT+F+ +DVF+  K G A  F+Y   D   D G T HSGCP+++G KWI TLWMR GV A+ +W  YDPSG P
Sbjct:   19 LTVN--VMLDMKAAKIWTVEDFITDEECKILQAHGKPRLARATVAGEDGLGTVSQSRKAQQASY--NPSGQSDPLWKLYERVFEFTKKKANYNLDYPGQEGFTIIQYNVDDQYTPHCDGACDGSKHLPKGRVATAVMYCQLPEEGGGTSFTKADVFVQPKRGMATVFAYRDNDGYMDHGFTEHSGCPVLKGEKWITTLWMRDGVDAKHTWAMYDPSGEP 233
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BLAST of mRNA_Ecto-sp13_S_contig849.19882.1 vs. uniprot
Match: B7FW42_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FW42_PHATC)

HSP 1 Score: 208 bits (530), Expect = 2.790e-57
Identity = 115/285 (40.35%), Postives = 165/285 (57.89%), Query Frame = 3 
Query:   24 CLTKAIAQDLAKKETEANKSMRMLEVVGDRARNYTCADPEMETTNSSLPSVKW----QDPEGGLTYNAQVFLDDPAAKIYLVDNFATDKECKALMDHASPHLQDATVNGGAGKTTLSQARRAKAGGVGADLNNKNSVTAPLYRRGYGFANHVTGYNLDMDGQEGFSVIKYGSD-------DEYRPHCDGDCTGTEFRPGGRVATMVIYCEQATVGGGTTFSSSDVFINGKEGQAAFFSYLGPDNKT-DKGRTRHSGCPIIEGTKWIATLWMRMGVTAEKSWQHYD 842
            CL    A  L  K  E     ++ E +   A N+TCADP M TT   +    W    +DP        QV  + P+++I++++ F + +EC+A+ D A+P L   TV  G G + LS++R+A   GVG D ++KN+++  L +R + + N VTG+N+++DGQE    I+Y  D       D Y PHCDG+C G   + GGRVATMV+YC+   +GGGT F  S+VF+    G AAFFSY+  D    + G T HSGCP++EGTK IA  WMR+GV  +  W  +D
Sbjct:  124 CLEYYTALILEDKNEELAFQAQVREQISALAENHTCADP-MRTTTEPIEMRSWRYLDEDPR-----TVQVLHNRPSSQIHVLEGFISPEECQAIKDAAAPKLHRGTVADGKGGSKLSESRKAWQAGVGVDYSHKNAIS-DLKKRLFAYTNEVTGFNMNLDGQEDIMSIQYFGDGVGNPTPDRYTPHCDGECNGMPHKRGGRVATMVMYCDIPEIGGGTNFQHSNVFVAPTIGAAAFFSYMNNDTGLHETGFTTHSGCPVLEGTKRIAVQWMRVGVDEDSPWDSFD 401
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BLAST of mRNA_Ecto-sp13_S_contig849.19882.1 vs. uniprot
Match: A0A7S0FTS6_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FTS6_9STRA)

HSP 1 Score: 202 bits (515), Expect = 5.910e-57
Identity = 107/260 (41.15%), Postives = 152/260 (58.46%), Query Frame = 3 
Query:  105 GDRARNYTCADPEMETTNSSLPSVKWQDPEGGLTYNAQVFLDDPAAKIYLVDNFATDKECKALMDHASPHLQDATVNGGAGKTTLSQARRAKAGGVGA--DLNNKNSVTAPLYRRGYGFANHVTGYNLDMDGQEGFSVIKYGS-------DDEYRPHCDGDCTGTEFRPGGRVATMVIYCEQATVGGGTTFSSSDVFINGKEGQAAFFSYLGPDN-KTDKGRTRHSGCPIIEGTKWIATLWMRMGVTAEKSWQHYDPSGL 854
            GD   NYTCAD ++ETT +   +  WQ   G    +  + +D PA+K+++V+NF +++ECKA+ + A+P L  ATV  G G +  S++R+A   G+    D   +    A L RR Y + NHV   ++  +GQE    I+Y          D Y PHCDGDCTG  F+ G R+ATMV+YCE    GG T F +S + I  K+G A FFSY+ P++ K D G T HSGCP++EG K I T W+R+GV  E  W  ++  G+
Sbjct:    1 GDLLENYTCADEDLETTKAE-DTTFWQHDNG--YSDVHIMIDRPASKVHVVENFISEEECKAMEEAAAPLLHKATVADGKGGSEFSESRKAMQAGIKVPWDKEKEGHPIATLSRRVYDYVNHVLDLDIQHNGQEDLMSIQYEGRGENDTEPDRYMPHCDGDCTGLNFKSGTRMATMVMYCEVPERGGATNFRNSGLHIVPKKGSATFFSYIDPESMKMDTGFTEHSGCPVLEGEKKIVTQWVRLGVDEENPWHSFNTLGV 257
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BLAST of mRNA_Ecto-sp13_S_contig849.19882.1 vs. uniprot
Match: A0A7S2UY63_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UY63_9STRA)

HSP 1 Score: 207 bits (528), Expect = 2.630e-56
Identity = 119/307 (38.76%), Postives = 173/307 (56.35%), Query Frame = 3 
Query:   24 CLTKAIAQDLAKKETEANKSMRMLEVVGDRARNYTCADPEMETTNSSLPSVKWQ-----DPEGGLT-------------YNAQVFLDDPAAKIYLVDNFATDKECKALMDHASPHLQDATVNGGAGKTTLSQ--ARRAKAGGVGADLNNKNSVTAPLYRRGYGFANHVTGYNLDMDGQEGFSVIKYGSDDEYRPHCDGDCTGTEFRPGGRVATMVIYCEQATVGGGTTFSSSDVFINGKEGQAAFFSYLGP----------DNKT-DKGRTRHSGCPIIEGTKWIATLWMRMGVTAEKSWQHYDPSG 851
            C+   ++++L + + E +    +   + +R R+Y CADP  ET+ +   S  W+     D +G +               +    LD   A++ LV ++ +++EC+  +D A P L  ATV   AG+T  +Q   RRA   G+  D ++  +    +  R + FA+   G    +  QE F+VI+YG DDEYRPHCD  CTG E+ PGGRVATMV+YC+ AT GGGTTF+++++F+  + GQA+FFSYLGP          +N+  D G T HSGCPI EG KWI TLWMR+GV+   S    DP G
Sbjct:  177 CIKVLMSEELVEVKREESFMKELQLAMANRLRDYQCADPTAETSQAVSRSY-WRHAVIKDSKGTMKPKGWGGRRRGFDGVHVDTLLDQERARMMLVHDWISEEECQYFIDQAKPKLHKATV---AGRTLQAQDPGRRAMQAGILYDWDDPENPATRVANRTFAFASDALGIEFPLRYQEQFTVIQYGVDDEYRPHCDAGCTGEEYLPGGRVATMVMYCQTATKGGGTTFTNANIFVQPQPGQASFFSYLGPPADGNSSSVKENRIMDDGLTEHSGCPIYEGEKWIVTLWMRLGVSEGHSADMVDPRG 479
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BLAST of mRNA_Ecto-sp13_S_contig849.19882.1 vs. uniprot
Match: A0A1Z5JAZ8_FISSO (Prolyl 4-hydroxylase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JAZ8_FISSO)

HSP 1 Score: 205 bits (521), Expect = 1.730e-55
Identity = 109/284 (38.38%), Postives = 168/284 (59.15%), Query Frame = 3 
Query:   15 FAECLTKAIAQDLAKKETEANKSMRMLEVVGDRARNYTCADPEMETTNSSLPSVKWQDPEGGLTYNAQVFLDDPAAKIYLVDNFATDKECKALMDHASPHLQDATVNGGAGKTTLSQARRAKAGGVGADLNNKNSVTAPLYRRGYGFANHVTGYNLDMDGQEGFSVIKY---GSD----DEYRPHCDGDCTGTEFRPGGRVATMVIYCEQATVGGGTTFSSSDVFINGKEGQAAFFSYLGPDN-KTDKGRTRHSGCPIIEGTKWIATLWMRMGVTAEKSWQHYD 842
             + C+ +  +  L   + + +    +L+ +   A NYTCADP ++ TN  +    W+    G++ N  V  + P+++I+++ +F + +EC+A+   A P L   TV  GAG + LS+ R+A   GV  D  N N     + +R + +AN+VTGY +++ GQE    I+Y   G D    D Y PHCDG+C G   + GGRVATMV+YC+   +GG T F  ++V++  K G AAFFSYL P   K+++G T HSGCP++ GTK IA  WMR+GVT+++ W  +D
Sbjct:  176 LSSCMEQQASAVLMDMDEKLSVQASVLKQISTLAENYTCADP-LKETNEPIEERTWE--YEGVSRNVGVLHNRPSSQIHVLHDFISAEECEAIRKAAEPTLHRGTVADGAGGSKLSENRKAWQAGVTYDAENPNDPILMVKKRLFAYANNVTGYEMELPGQEDLMSIQYFGSGVDNPTPDRYTPHCDGECNGFPHKKGGRVATMVMYCDVPELGGATNFQHANVYVKPKVGAAAFFSYLNPTTRKSEEGFTTHSGCPVLLGTKRIAVQWMRIGVTSDEPWDSFD 456
[Close]
BLAST of mRNA_Ecto-sp13_S_contig849.19882.1 vs. uniprot
Match: A0A6U4DUF5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4DUF5_9STRA)

HSP 1 Score: 201 bits (511), Expect = 4.020e-54
Identity = 112/259 (43.24%), Postives = 146/259 (56.37%), Query Frame = 3 
Query:  117 RNYTCADPEMETTNSSLPSVKWQDPEGGLTYNAQVFLDDPAAKIYLVDNFATDKECKALMDHASPHLQDATVNGGAGKTTLSQARRAKAGGV--------GADLNNKNSVTAPLYRRGYGFANHVTGYNLDMDGQEGFSVIKYGSDDEYRPHCDGDCTGTEFRPGGRVATMVIYCEQ--ATVGGGTTFSSSDVFINGKEGQAAFFSYLGPDNKTDKGRTRHSGCPIIEGTKWIATLWMRMGVTAEKSWQHYDPSGLPSA 863
            RNYTCADP+ME T+ +   + W DPEG    +  V  +   A I    +F T+ EC A+   A+P L  AT     G   +S  RRA    +        G+D +  N V   LY     + N+ T Y+LD+ GQEG + I+Y   DEY PHCDG C G+  +  GRVATMV+YC+   A  GGGTTFS + VF  G    + FFSY+G D + D G T HSGCPI EG+K+IAT+W R GV+ ++ W   DP G P A
Sbjct:  203 RNYTCADPDMELTDRTDRQI-WVDPEGHRV-DVGVLFNSSHATIRYNKDFLTEGECAAIKRIATPKLHRATTADSDGGDKVSFTRRADQASIDYYPKAKPGSDRDIVNGVIDRLYS----YVNYFTDYDLDLPGQEGITAIRYNVSDEYHPHCDGACDGSMHKDTGRVATMVMYCDMPPADGGGGTTFSRAGVFTKGVPQSSVFFSYMGQDGRMDDGLTEHSGCPIFEGSKFIATMWFRKGVSKDRKWFQSDPLGYPKA 455
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig849.19882.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L771_9PHAE3.270e-24694.49P4Hc domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A835YYR1_9STRA2.010e-8446.75Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A836CGT5_9STRA1.570e-7750.74P4Hc domain-containing protein n=1 Tax=Tribonema m... [more]
A0A7S1GMS7_CYCTE3.880e-6039.46Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A812U7S5_SYMMI9.660e-6048.40P4ha1 protein n=1 Tax=Symbiodinium microadriaticum... [more]
B7FW42_PHATC2.790e-5740.35Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S0FTS6_9STRA5.910e-5741.15Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A7S2UY63_9STRA2.630e-5638.76Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A1Z5JAZ8_FISSO1.730e-5538.38Prolyl 4-hydroxylase n=1 Tax=Fistulifera solaris T... [more]
A0A6U4DUF5_9STRA4.020e-5443.24Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig849contigEcto-sp13_S_contig849:616..7439 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score632.9
Seed ortholog evalue9.9e-179
Seed eggNOG ortholog2880.D8LFZ0
Model size1921
KEGG rclassRC00478
KEGG koko:K00472
KEGG ReactionR01252
KEGG Pathwayko00330,ko01100,map00330,map01100
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.procollagen-proline 4-dioxygenase activity
EggNOG OGsKOG1591@1,KOG1591@2759
Ec32 ortholog descriptionvon Hippel-Lindau disease tumour suppressor, beta domain
Ec32 orthologEc-21_005220.1
EC1.14.11.2
Cds size1146
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig849.19882.1prot_Ecto-sp13_S_contig849.19882.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig849 618..6666 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464118.770901-UTR-Ecto-sp13_S_contig849:615..6171681464118.770901-UTR-Ecto-sp13_S_contig849:615..617Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig849 616..617 +
1681464118.8683665-UTR-Ecto-sp13_S_contig849:6666..74391681464118.8683665-UTR-Ecto-sp13_S_contig849:6666..7439Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig849 6667..7439 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464118.7944512-CDS-Ecto-sp13_S_contig849:617..8331681464118.7944512-CDS-Ecto-sp13_S_contig849:617..833Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig849 618..833 +
1681464118.806739-CDS-Ecto-sp13_S_contig849:1736..18381681464118.806739-CDS-Ecto-sp13_S_contig849:1736..1838Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig849 1737..1838 +
1681464118.8179002-CDS-Ecto-sp13_S_contig849:2986..31051681464118.8179002-CDS-Ecto-sp13_S_contig849:2986..3105Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig849 2987..3105 +
1681464118.8288624-CDS-Ecto-sp13_S_contig849:4283..44491681464118.8288624-CDS-Ecto-sp13_S_contig849:4283..4449Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig849 4284..4449 +
1681464118.8394995-CDS-Ecto-sp13_S_contig849:5086..51701681464118.8394995-CDS-Ecto-sp13_S_contig849:5086..5170Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig849 5087..5170 +
1681464118.849544-CDS-Ecto-sp13_S_contig849:5673..58461681464118.849544-CDS-Ecto-sp13_S_contig849:5673..5846Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig849 5674..5846 +
1681464118.8593156-CDS-Ecto-sp13_S_contig849:6380..66661681464118.8593156-CDS-Ecto-sp13_S_contig849:6380..6666Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig849 6381..6666 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig849.19882.1

>prot_Ecto-sp13_S_contig849.19882.1 ID=prot_Ecto-sp13_S_contig849.19882.1|Name=mRNA_Ecto-sp13_S_contig849.19882.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=382bp
MIPEFAECLTKAIAQDLAKKETEANKSMRMLEVVGDRARNYTCADPEMET
TNSSLPSVKWQDPEGGLTYNAQVFLDDPAAKIYLVDNFATDKECKALMDH
ASPHLQDATVNGGAGKTTLSQARRAKAGGVGADLNNKNSVTAPLYRRGYG
FANHVTGYNLDMDGQEGFSVIKYGSDDEYRPHCDGDCTGTEFRPGGRVAT
MVIYCEQATVGGGTTFSSSDVFINGKEGQAAFFSYLGPDNKTDKGRTRHS
GCPIIEGTKWIATLWMRMGVTAEKSWQHYDPSGLPSAYALAQAKSGVSAT
DAASVEAQHSAVDGNQPDSTHPVSSATTVTQKEQEGDASVNDSSSSTTST
SSADSAAAAAAEVQEEGYLSGITGSLSGWFS*
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mRNA from alignment at Ecto-sp13_S_contig849:616..7439+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig849.19882.1 ID=mRNA_Ecto-sp13_S_contig849.19882.1|Name=mRNA_Ecto-sp13_S_contig849.19882.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6824bp|location=Sequence derived from alignment at Ecto-sp13_S_contig849:616..7439+ (Ectocarpus species13 EcNAP12_S_4_19m)
AGATGATCCCGGAGTTCGCGGAGTGCCTGACCAAGGCCATCGCGCAGGAC
CTGGCCAAGAAGGAGACGGAGGCGAACAAGAGCATGCGCATGCTGGAGGT
GGTGGGGGACAGGGCGAGGAACTACACGTGCGCCGACCCCGAGATGGAGA
CGACGAACAGCAGCCTGCCGTCCGTGAAGTGGCAGGACCCGGAGGGGGGG
CTCACGTACAACGCTCAGGTGAGAGGGGGGATGGGGGGTCCTTATGTAAA
CGCATGCCTTAGTCGGATGGAAGCCTCGGCAGGGTTTTTCTACACAGCAG
TAAACATATTGAATAATACACGCACTCGGGGAAGTTGGGTTAAGGATAGG
ATGCGTACCCACTCCCTGTTCTATTTTCTATTTTCCTCGTGAACCTTAGT
TTATCGGGAAGGTAGTCCTATTTGATAGACGATAGACCTCTCATCCCTGC
AACGCCGGAACGAAGGGATGTGATGCAGGGTTTTCACAGTGTACGTTTCA
CGAGGATGAGCCAGAAGCTGGTCATCATCCTGGCGTTTGCTGTGTAGGCC
CAGCGGGGGGTTGGGGAGGGTGTAGACATGTGGACGCGTGCCGTATAGTA
GTCGGTAGACCTCGCATTCCTACACTGCCGGGACGAAGCAAGACCCAGGC
TACGTTTCACAAGGATGAAGCAGAAGCTGGGCATCATCCTTTGCTTTTGC
TGTGCCGGCCCAGAGGGGGAGAGGGGTGTGTATAACGCGTCGTGTACGAG
GGTTGTGCAATGTAGATAGTAGGTAGCTGGAGCAGGAGGACAGACAAAGG
AAATGTAGAGTATGTAGTGAAAATATGGGTGAAGAAGGACACCTTCGCCG
GTATTACTGAATCTTTTCTTTTATAGGTGCCATAATGTGTTGGATGTATC
TACTGCTGTATTTGCTTTGTTACCCAGATGGGAGCTCGAGTTCAATGTTG
CGGTTCGGTCCGTCGAGCGGTTTCGTTTTGGTGTTGGTGTCTCTTGTGCT
TATTCATCTATCCTGTACGCGGCCGTTTGCTTGTCTGCGAAAGTACAGAC
CAAGACTCGGGGTATCCGAAGCACTCGCTCACGGCACTCCCATGTGTTGG
CTGTTGCCGTTTTTTTTGCAGGTGTTCCTGGATGACCCAGCGGCCAAGAT
TTACCTTGTGGACAACTTTGCCACGGACAAGGAATGCAAGGCTCTCATGG
ACCACGCCAGCCCCCACCTACAGGTAATCACATGCATACACGCGGACGTG
CAGCTTGTGAGTTTTGTTTGTGTTTGCGCTGCAATTGTGACGAAGGCACC
GTGCCGACCTCGGTGTCGTAGCCGTGGTTGGTGGAGAGCAAGGACGCTCG
TCTTGGGGGGTCTTTCCGCCGATACCGTAATGAGGCGGAGAGATGGCACC
CCCCCCCCCTTGCACCGGCTTTCAAAGATCGATTGCTTGACAACCAGGTG
TGTGCGGGAAGAATGCGGTTCGACGACGGATCGCCCGTGACGAGATGTTT
CCAAGAAACACCATCGTTGGTGTTGGCACAAGCTGTTGGTTGTGGAGAAA
TCGAGCTTTGAAAACCGGTCTGCGGGGGGGGGGGATGCCATCACTTCCCG
TCGTGCGGTATTATTGTTGTTCAAGGTCTAGTCCTGGCCATGGTTGGACA
GCTTGGGTCCGAGGCTTTGTGTGAAGAGAGGGCGTGGTGCCTTATGCGTG
GAAAAGTGGCTGTTTTAACCCCCAAGCCGTGGCCGTACGCAGGACGGTGA
TGTCGAACTGAGGTGGAAAGCTGAACGCGATAGACGGGACATACAGCAGT
TTGGTTATGGTGAAACACACAAGGACTATTCTACCTTGCGGTTGTCTCTA
TTACGGACGGAGAAGTATCAACGAATCTATGTTGACACTGACCTCACCCG
GCCGCTGGACACGAAACGATGTTGGTGTCACGTAGACTTGGGTGCTGTTC
TACGAAACGAAGTACTTCGAAGTTGTTTTCAACTTTCACCGCAGTGTTTA
AGGTACAATTACCTTGTACCTGTACGCGTGACGAAATATATTTTGTTTTG
GGGGGGGCGGTAGAGTACGGATCGGATCGAGAAGTGGAAACGGTTTTTGA
CAGTGGAAACGCAACAGCTTGCCCCCGCGAGACTTGAAGGTGGAAATTCT
TACCGCAAGAGGAAGGAGCCTTGTTCGCATCGACATTGTGGCGCAGCTCT
TGGTTATATAACATGGCAATGACATGACATGACAATGACATATGACATCA
CAATGACATGACATCACAATGACATCACAATGACTGACATCACAATGACT
TGACACTGACATGATATGGCGCGATATGGCACCACAACATGACGATGACA
TGACATGACATGACATGACAGGACGCGACCGTCAACGGAGGTGCGGGAAA
GACCACCCTCTCGCAGGCCAGGCGAGCTAAGGCCGGCGGCGTGGGGGCGG
ACCTGAACAACAAGAACTCCGTCACCGCCCCTCTTTACAGGTTAGTACCA
AAGGTGGAGATCCATGAAAAGGGTACATACTATGCGTATCTCCGTAGATC
GCCTTAATTAAAATGTGGAGGTCCCCTCCATGAAATGGTACATGTAGTCT
CTTGAGATCCCTTTCATAAAAGGGTACTTGTAATCTCCGGAGATCCCCTT
CGTAAAGGATACAATCAAATCCCTGGAGGCAAGCAATGCAATCTCCGAAG
GCACAAACCGCGGCGGGGTGGGTAGGTAGGGGTCCTCAGGGAAAGGAACT
CTTCATTGTGACCACAGATTGATTCGAGCTACCACATTCCCGGCAGAAAT
GCTGTGAGCGCTGGTTTGAAGTTATGAACAATAAAAATACCTCCCCGACG
TCCTGCTATCGAGCAAAACGATTTCCTCGTTCTTCTCTTTGTTTTATCGA
GAGAAAAAAAAAAAAAACTCCCACGACGAAGAAGCCACGGTTTGGGCGGC
GGCTTTCCGAATGAGTTGGTATTTTGCGAAACATGACCGAAAGGATACAT
AGCCACGAATTGACCAAGTTCCGCCTTCGATCACTTGTCGACACAGGAAA
ACGAAGGAAGTTTTAGTTTTGATTCGGTGATGGTGATGGTGCTGGTTTTG
CGAACGAGAGCAACGATCCCTCTCCCACAAATTGTTTGTGCGATGTGAAA
ATGTACACGCTGACATGATTTGCGAAAGTTCGACGCTCACAGACCTGGGA
GTTTTTCAACAAAAACTCGTGCAATGTATAATATTTATGTAGACACGCTT
GAAGCAACACAGTAGTATGAGGCGACCCAAGTTGCCCTTGGCCCGCATCT
GTTTTACGTCGCCCGCAGAATTTTGAGGAACGATTTTTCGTCTTGGCAAC
CTGGTGACACACCTTCGCACCTACCCGCATGTGGATTTCCAGTCTTGACC
CCTCCTCCCCCCTTAGGTTCTACTTCATCCTAATGAAATGTGGCCTGGGC
CAGCGAAAACCCTGCATATCGCTCCATGCCGGCATTGTAGGGACGTGGGT
CAGTGGTCTAACGACTACGGCATGCGTTTTCGTTAGTACACCCCCTTCCC
ACTCCTCAATGAAATGAACACAAAACACATTAGGCGCGTAAATGCACCTG
CATGTGTTTTTCCACGTTTGACCCCCCCCCCCCCCCCCCGATATCTATCA
ACAAAAAACACAAATCAGGCGGGGATACGGCTTCGCGAACCACGTGACGG
GATACAACCTGGACATGGACGGTCAGGAAGGGTTTAGCGTGATCAAGTAC
GGCTCGGACGACGAGTACCGGCCGCACTGCGACGGCGACTGCACGGGGAC
GGAGTTCCGACCAGGCGGGCGTGTGGCCACCATGGTAAGCAGACGGCTGG
GGATAGGGAAGCTTTTCACTTTTCACGTGGGGAGAGCGAGTTGGGGTGCA
CCGTGAGGGGGTTTTTCCGTTAGCCGGTGTTGTGCGATTCAAAGTATGGA
GGAGTTGTATACACAGAGCCGTGCATGCCATATTCGCATGGCTGTGGTCT
TGATGCCAGAGATTTCTATCGCGACAAAGCCGGAACGGGTGACGTCAGGG
GCCTGCGCGTAAAGGGGGAGGGGGGGGGGGGGGCTTCTGAATAAGCGAGG
AGGTGCTTTACCACCACAGTGAAAGCTAAAATCGAGCTTGCTTCATGGGG
GGGCGTACTCATTTGGTTGCTTGTGTCGCTTGCCATGGACCGCGCAGCCG
TTTCGAGACCCCGCGCTGTCTCCCCTCCGTTCCCCGCTTCATGTGCTGCA
AACACCTCCAACACATTTGTGGCCTCTTGGATGTTATTGTTGGGAAGAGC
GGTGTTCGCTTTCTTGACGAGTATTTTTTCAAGCCTTGGCAGCTGCGTGT
ATCTATCTCTTGCTCAACGTGTGTTCCATGAAGGTGGGAGCGATCATGCT
TTCGGTGCTCATGCAGCCCCGCGCAGCAGTAGATCACGAAGTGCGTGTAC
CCTATCGACATGCAACCTTAGGTAATCTACTGCGAGCAAGCTACCGTAGG
GGGAGGGACGACCTTCAGCTCGTCGGACGTCTTCATCAACGGCAAGGAAG
GGCAGGTGTGCCAAGTCAGAGGAATCTAATCTTAATCTTCATGGTCTCGT
CTCTGTGCTCCGCCGAATCGATGACTTCATGTGAAAGGTTGTTGGGGTGT
TTGTAGCGTGTGCTCCTTTCACCGTCACTCCTCGTCGCTTGTGTATCGAA
TGTGTAGGAGCAGCGACCTTTTGCGGGTGCGTGTGACTCGCCTTTACGAG
AAAGGCGTATCCATGCAACAGCACCAGTGGCGACGGCGACTGCCATCGCG
ACCTCTACAGAAGATTTATTCTATAGCGCTACACGCGGCCGGTATGTGGC
CGGTGTCCGTTCTGCTCTCCCACCCTCTCCTCTCCGAACGCGGCGATTTT
AGCAAGTGTTGTTCAACGTCACACACACACACACACCCCCCCCCCGACCG
TACTATCGGTGCACCCCCCTATTGACACCCAGCCAAGCGTTGTTCAACGT
CACCCCTTCCCTCTCGTACTATCCGCGTACCTGCCCCCCCCCCCCTCTCA
ACTTGCAGGCGGCGTTTTTCTCGTACCTTGGTCCCGACAACAAGACCGAC
AAGGGTCGGACTCGTCATTCCGGCTGCCCAATCATCGAGGGCACCAAGTG
GATCGCCACGCTGTGGATGAGGATGGGGGTCACCGCGGAGAAGTCTTGGC
AGCACTACGACCCTTCGGGGCTGCCCTCTGCGTGAGTCGACTGCAGATAA
AGACACTGCTGTGGAGCCCGCCCTGTTTTAAGAACTGGACAGCTGAAAGC
TCGTGCTCGACATTATGCCAAACTTGAGCACCGTTTTGTGAGCCCGCTTA
AGAACGATCCGAAAGGATGTCCATGTGGCGGGTCTTTGGGAACCGTGGTC
TCCTCCAAAACTAGAGGTCGTGAAGTGTGGGCACTATCCGTGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCAACCGCGCCGGGAGTTGTAGTGTTAGAAGC
CCTCGCCCGAAAGAATACCGGTGGCGTCGTGTTTCACGTTTCCTCGCTCT
CTCTCTAATGCATTTAGCGGTGTAGCCACGAGAATGCGCTCGAACAAGGT
GAACAGGCCGTGGTACACTAGGTTGTACTATAAACAGCAGTCGACCGCTA
CATAGAAAACTGACAAATCATCACAGCAACGAATCCGCCGCAACAAACGA
CAACAAGAGACAACAAAATGCCTCCCCCGGTCCTCTGTGGCAACTGCCCG
CGTCGTACCACCCAGGTACGCTCTGGCGCAAGCAAAGAGCGGAGTCTCGG
CGACGGACGCAGCCAGCGTGGAGGCCCAGCACAGCGCTGTCGACGGTAAC
CAGCCCGATTCCACGCACCCGGTCTCATCGGCAACCACGGTGACCCAAAA
GGAGCAAGAGGGTGATGCCAGCGTTAACGACAGCTCCAGCAGCACCACCA
GCACCAGCAGTGCGGACAGTGCTGCTGCTGCCGCCGCGGAGGTGCAAGAA
GAAGGATATCTATCGGGAATCACCGGTTCTTTGTCCGGCTGGTTTTCTTA
ACAACAAACGAATGAAAACAGTACAAAGCGTGTGCCGGCCGTAAAGTTGC
GGGTTTGCTCGCACGGGTGCGGTGTGCGGAGGTTGGCTGCAAAGTTTTTA
TGTGTCGTGCCCTGACCGTTGTTGTTTCCTACCTGTAGACCGCAAGGCCC
GGAAGGCGTTTGCTCGCGGCGTGCGTGTATAGCTTGGTTGTATTTTTGGG
TAATGGGGGGGGGGGGGCGGGCGACATTCACGCGTAGACGCAAACAGCGG
TTCCATTGATGTAAAGTAGTGTGGTGTGTTTGTTGGCACTGTAGCTCAAA
ATGGTTTCCGCCTTGCCTTGTACGAGCTTCTTTTTGCGTTATACCAAAAC
CAAGAGAAAGGAAATTAAGAGAAAGACAAACTTGCGTTCAAGGATTCCGC
TGTCAACCGACGACTTCGTTCTGTATTCTGTGACGTCCTTAATTCGTTAT
TGGAGGTGCACGTCTGTTCAGATGAGAATTCCCGCCGGTGTTGGCACGAG
ACCCCCCCCCCTACAGTTCTTTAGCGGTTTGGTGGTCATACATGGTTCGC
ACGTGTGCACATGTGCACGTAGACTGTGCATAACGTAGGAAGTGGCGTAT
ACGGCTTGTGACTCGGCCCACCTGTGGTGCAGAGCTCAGTCAAGCTTTGG
AATTTAATGCATTGATGTTGAAATTTAGTGCATCGAGTGTTTGGGGGGGG
AACTCTCCCAACAACCTGAAGCACTTGCTGTTGGTTTTTGGTTGATGATT
GTTGCGGGAAACATTCGAAAAACC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig849:616..7439+

>mRNA_Ecto-sp13_S_contig849.19882.1 ID=mRNA_Ecto-sp13_S_contig849.19882.1|Name=mRNA_Ecto-sp13_S_contig849.19882.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1146bp|location=Sequence derived from alignment at Ecto-sp13_S_contig849:616..7439+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGATCCCGGAGTTCGCGGAGTGCCTGACCAAGGCCATCGCGCAGGACCT
GGCCAAGAAGGAGACGGAGGCGAACAAGAGCATGCGCATGCTGGAGGTGG
TGGGGGACAGGGCGAGGAACTACACGTGCGCCGACCCCGAGATGGAGACG
ACGAACAGCAGCCTGCCGTCCGTGAAGTGGCAGGACCCGGAGGGGGGGCT
CACGTACAACGCTCAGGTGTTCCTGGATGACCCAGCGGCCAAGATTTACC
TTGTGGACAACTTTGCCACGGACAAGGAATGCAAGGCTCTCATGGACCAC
GCCAGCCCCCACCTACAGGACGCGACCGTCAACGGAGGTGCGGGAAAGAC
CACCCTCTCGCAGGCCAGGCGAGCTAAGGCCGGCGGCGTGGGGGCGGACC
TGAACAACAAGAACTCCGTCACCGCCCCTCTTTACAGGCGGGGATACGGC
TTCGCGAACCACGTGACGGGATACAACCTGGACATGGACGGTCAGGAAGG
GTTTAGCGTGATCAAGTACGGCTCGGACGACGAGTACCGGCCGCACTGCG
ACGGCGACTGCACGGGGACGGAGTTCCGACCAGGCGGGCGTGTGGCCACC
ATGGTAATCTACTGCGAGCAAGCTACCGTAGGGGGAGGGACGACCTTCAG
CTCGTCGGACGTCTTCATCAACGGCAAGGAAGGGCAGGCGGCGTTTTTCT
CGTACCTTGGTCCCGACAACAAGACCGACAAGGGTCGGACTCGTCATTCC
GGCTGCCCAATCATCGAGGGCACCAAGTGGATCGCCACGCTGTGGATGAG
GATGGGGGTCACCGCGGAGAAGTCTTGGCAGCACTACGACCCTTCGGGGC
TGCCCTCTGCGTACGCTCTGGCGCAAGCAAAGAGCGGAGTCTCGGCGACG
GACGCAGCCAGCGTGGAGGCCCAGCACAGCGCTGTCGACGGTAACCAGCC
CGATTCCACGCACCCGGTCTCATCGGCAACCACGGTGACCCAAAAGGAGC
AAGAGGGTGATGCCAGCGTTAACGACAGCTCCAGCAGCACCACCAGCACC
AGCAGTGCGGACAGTGCTGCTGCTGCCGCCGCGGAGGTGCAAGAAGAAGG
ATATCTATCGGGAATCACCGGTTCTTTGTCCGGCTGGTTTTCTTAA
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