mRNA_Ecto-sp13_S_contig124.1988.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig124.1988.1
Unique NamemRNA_Ecto-sp13_S_contig124.1988.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig124.1988.1 vs. uniprot
Match: A0A6H5K1V2_9PHAE (Ubiquitin-like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1V2_9PHAE)

HSP 1 Score: 711 bits (1835), Expect = 2.950e-256
Identity = 394/433 (90.99%), Postives = 402/433 (92.84%), Query Frame = 1 
Query:    1 MAEFGAKLCSYPGCRQHDFLPYACPACRQVFCSDHMAIGSGHRCDHGEEYLASRMGEGGRTAAPGSHPLSLSKPSEVMSAVTSRFDGREKELNAATTHLNIKASEGEAGEGRTGAPDKLLKSSQLAMDKAATEKGKRVSTQVHRMLLKAKAVGEKKLRMEDRFFLEVHYCGNDTDVHHLFFSRLWTVGRALDDILKTRRRYLRLKAGEEARPLELARVGASSGLPTGGILNNLPPEQLQLFDAVMVRPRTLPPAGSSASDTPAEGGSSVSAVAAPGLNVEGAPDDLKGDGICGDEAPSEQQQRQTGQVLSTCSVGAKVSGCEEAGAGSGVTXXXXXXXXXXXXXXXSEKXXXXXGMTITVGHGKSVYELGGVMPDRVSVLDLKRRLEPITGVPFLRQRLLFKGILRDGDKIGATKIVEGAKVMLLGTPAAASK 1299
            MAEFGAKLCSYPGCRQHDFLPYAC ACRQVFCSDHMAIGSGHRCDHGEEYLASR G+GGR AAPGSH LSLSKPSEVMSAVTSRFDGREKELNA TTH NIKASEGEAGEG  GAPDKLL++SQLAMDKAATEKGKRVSTQVHRMLLKAKAVG+KKLRMEDRFFLEVHYCGNDTDVHHLFFSRLWTVGRALDDILKTRRR+LRLKAGEEARPLELARVGASSGLPTGGI  NLPPEQLQLFDAVMVRPRTLP AGSSASD  AEGGSS S VAAPGLNVE APDDLKG GI GDE PSEQQQRQTG VLSTC+VGAK SG EEA AGSGVT  XXXXXXXXXXXXX   XXXXXGMTITV HGKSVYELGGVMPDR+SVLDLKRRLEPITGVPFLRQ+LLFKGILRDGDKIGATKIVEGAKVMLLGT AAA K
Sbjct:    1 MAEFGAKLCSYPGCRQHDFLPYACAACRQVFCSDHMAIGSGHRCDHGEEYLASRNGKGGRIAAPGSHRLSLSKPSEVMSAVTSRFDGREKELNAVTTHFNIKASEGEAGEGSAGAPDKLLRNSQLAMDKAATEKGKRVSTQVHRMLLKAKAVGDKKLRMEDRFFLEVHYCGNDTDVHHLFFSRLWTVGRALDDILKTRRRHLRLKAGEEARPLELARVGASSGLPTGGIFTNLPPEQLQLFDAVMVRPRTLPRAGSSASDISAEGGSSDSTVAAPGLNVESAPDDLKGSGIGGDEEPSEQQQRQTGHVLSTCAVGAKSSGFEEAVAGSGVTSAXXXXXXXXXXXXXXXXXXXXXGMTITVCHGKSVYELGGVMPDRMSVLDLKRRLEPITGVPFLRQKLLFKGILRDGDKIGATKIVEGAKVMLLGTAAAAKK 433
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BLAST of mRNA_Ecto-sp13_S_contig124.1988.1 vs. uniprot
Match: D8LBN6_ECTSI (Ubiquitin-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBN6_ECTSI)

HSP 1 Score: 507 bits (1305), Expect = 5.690e-177
Identity = 289/317 (91.17%), Postives = 302/317 (95.27%), Query Frame = 1 
Query:  352 KLLKSSQLAMDKAATEKGKRVSTQVHRMLLKAKAVGEKKLRMEDRFFLEVHYCGNDTDVHHLFFSRLWTVGRALDDILKTRRRYLRLKAGEEARPLELARVGASSGLPTGGILNNLPPEQLQLFDAVMVRPRTLPPAGSSASDTPAEGGSSVSAVAAPGLNVEGAPDDLKGDGICGDEAPSEQQQRQTGQVLSTCSVGAKVSGCEEAGAGSGVTXXXXXXXXXXXXXXXSEKXXXXXGMTITVGHGKSVYELGGVMPDRVSVLDLKRRLEPITGVPFLRQRLLFKGILRDGDKIGATKIVEGAKVMLLGTPAAASKK 1302
            +LLK+SQLAMDKAATEKGKR+STQVHRMLLKAKAVG+KKLRMEDRFFLEVHYCGNDTDVHHLFFSRLWTVGRALD ILKTRRR++RLKAGEEARPLELARVGASSGLPTGGILNNLPPEQLQ FDAVMVRPRTLPPAGSSASDT A+GGSS SAVAAPGLNVEGAPDDLKG GI GDE P++QQQRQTG VLSTC+VGAK SGCEEAG GSG  XXXXXXXXXXXXXX SE XXXXXGMTITVGHGKSVYELGGVMPDR+SVLDLKRRLEPITGVPFLRQ+LLFKGILRDGDKIGATKIVEGAKVMLLGT AAA+KK
Sbjct:   32 RLLKNSQLAMDKAATEKGKRMSTQVHRMLLKAKAVGDKKLRMEDRFFLEVHYCGNDTDVHHLFFSRLWTVGRALDHILKTRRRHMRLKAGEEARPLELARVGASSGLPTGGILNNLPPEQLQSFDAVMVRPRTLPPAGSSASDTSAQGGSSDSAVAAPGLNVEGAPDDLKGSGIGGDEEPNKQQQRQTGHVLSTCAVGAKASGCEEAGEGSGXXXXXXXXXXXXXXXXASEXXXXXXGMTITVGHGKSVYELGGVMPDRMSVLDLKRRLEPITGVPFLRQKLLFKGILRDGDKIGATKIVEGAKVMLLGTVAAAAKK 348
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BLAST of mRNA_Ecto-sp13_S_contig124.1988.1 vs. uniprot
Match: A0A4D9CUT0_9STRA (Ubiquitin-like domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CUT0_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 1.930e-11
Identity = 74/234 (31.62%), Postives = 105/234 (44.87%), Query Frame = 1 
Query:    4 AEFGAKLCSYPGCRQHDFLPYACPACRQVFCSDHMAIGSGHRCDHGEEYLASRMGEG---GRTAAPGSHPLSLSKPSEVMSAVTSRFDGREKELNAATTHLNIKASE-GEAGEGRTGAPDKLLKSSQLAMDKAATE-KGKRVSTQVHRMLLKAKAVGEKKLRMEDRFFLEVHYCGNDTD---------------------------VHHLFFSRLWTVGRALDDILKTRRRYLR 609
            A +G K C+   C ++DFLP+ C  C  + C+DHMA  + H C   E+  +    +    GR  A            E M  V  RFDG  +   A   H  ++ S+ G     R  A +K LK+ +       T  KG +   +V +MLLK+KA G   L  +DRF+LEV   G D +                           V +LFFSRLW++GR LD+ ++  RR LR
Sbjct:    3 AHYGDK-CAL--CGRNDFLPHRCTLCSLLHCTDHMAPFA-HECAGREDNTSKDRPQAFGLGRALA------------EEMDRVRRRFDGASEW--ATKEHFRVQGSQAGLVASFR--AENKYLKAYREQAKAGKTRHKGHKTREKVRQMLLKSKAQGRSSLHADDRFYLEVRIGGLDVEEKGTASPSSLPPSAPASTPSVASSAEVVDYLFFSRLWSLGRVLDETIEKHRRALR 216
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BLAST of mRNA_Ecto-sp13_S_contig124.1988.1 vs. uniprot
Match: A0A7S3UX29_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UX29_HETAK)

HSP 1 Score: 70.9 bits (172), Expect = 4.430e-10
Identity = 77/296 (26.01%), Postives = 131/296 (44.26%), Query Frame = 1 
Query:  433 MLLKAKAVGEKKLRMEDRFFLEVHYCGNDTD-VHHLFFSRLWTVGRALDDILK-TRRRYLRLKAGEEARPLELARVGASSGLPTGGILNNLPPEQLQLFDAVMVRPRTLPPAGSSASDTPAEGGSSVSAVAAPGLNVEGAPDDLKGDGICGDEAPSEQQQRQT-------GQVLSTCSVGAKVSGCE---EAGAGSGVTXXXXXXXXXXXXXXXSEKXXXXXGMTITVGHGKSVYELGGVMPDRVSVLDLKRRLEPITGVPFLRQRLLFKGILRDGDKIGATKIVEGAKVMLLGTP 1284
            M +K+K+ G   +  +++FF+ V     D +   H++F RLWTVGRA+D ++      Y R   G   + LEL     +S +    I++     +L+ FD V++       + + A D   +G             ++G PD+ K       E  + Q +          G+     S  AK++  +    + +G  ++                E        T  V  GK +Y +  +  +  +VLDLK +LE +TG+P  +Q+LL+KGIL+D   I  T +  GAKV+L+  P
Sbjct:    1 MKIKSKSAGPAGVLNDNKFFVLVQLKTPDINWERHMYFPRLWTVGRAIDYVISFLSEEYRRAILG---KALELYCERINSIVSKDTIIHG---SKLEEFDTVIL-------SFAGAFDLLLDGSC-----------LDGEPDEKKQTSYAEHEGATRQSKMDKSIKADNGGEQTILASRDAKLNDEKCLISSSSGGPLSLQMNADSLIPPSSPAHESNPGTSSFTFYVKVGKEMYSVADLDENANTVLDLKVKLEQLTGIPVQQQKLLYKGILQDSQVICGTAVKAGAKVILMSKP 272
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BLAST of mRNA_Ecto-sp13_S_contig124.1988.1 vs. uniprot
Match: V5I0M0_IXORI (AN1-type domain-containing protein n=4 Tax=Ixodes TaxID=6944 RepID=V5I0M0_IXORI)

HSP 1 Score: 63.9 bits (154), Expect = 9.200e-8
Identity = 58/201 (28.86%), Postives = 88/201 (43.78%), Query Frame = 1 
Query:   19 KLCSYPGCRQHDFLPYACPACRQVFCSDHMAIGSGHRCDHGEEY-LASRMGEGGRTAAPGSHPLSLSKPSEVMSAV----TSRF--------DGREKELNAATTHLNIKASEGEAGEGRTGAPDKLLKSSQLAMDKAATEKGKRVSTQ-VHRMLLKAKAVGEKKLRMEDRFFLEVHYC-GNDTDVHHLFFSRLWTVGRALD 576
            K C    C + DFLP+ C  C+++FCSDH    + H CD  E + L     +  +T           K  E+M  V    +  F        D + K L + + H+ +           T    K+L+S + +   A+T      + Q V  M +K  A GEK + + DR + EV+   G+        FS+LWTVGRA+D
Sbjct:    9 KHCHVESCNRLDFLPFECAHCKKIFCSDHRTSDA-HVCDQIETHVLTDSQAKSSKTGTLFGCTFGDCKQKELMPVVCTLCSDNFCVHHRHAQDHKCKYLASPSEHMPL----------TTQVVQKILESKKPSEKPASTRANISPTAQKVKLMRMKMHAAGEKSIPLVDRVYFEVYLPKGHKVRSKPYHFSKLWTVGRAID 198
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BLAST of mRNA_Ecto-sp13_S_contig124.1988.1 vs. uniprot
Match: UPI001894C229 (AN1-type zinc finger protein 1-like isoform X4 n=1 Tax=Rhipicephalus sanguineus TaxID=34632 RepID=UPI001894C229)

HSP 1 Score: 58.2 bits (139), Expect = 4.490e-6
Identity = 57/194 (29.38%), Postives = 86/194 (44.33%), Query Frame = 1 
Query:   19 KLCSYPGCRQHDFLPYACPACRQVFCSDHMAIGSGHRCDHGEEYLAS-RMGEGGRTAAPGSHPLSLSKPSEVMSAV----TSRFDGREKELNAATTHLNIKASEGEAGEGRTGAPDKLLKSSQLAMDKAATEKGKRVST--QVHRMLLKAKAVGEKKLRMEDRFFLEVHYC-GNDTDVHHLFFSRLWTVGRALD 576
            K C    C + DFLP+ C  C+  FCSDH    + H CD  + ++ S +  +  RT        S     E+         + F  R +  +A         S+ E     T    K+L+S + A +K  + K     T  +V  M +K  A GEK + + DR + EV++  G+        FS+LWTVGRA+D
Sbjct:    9 KHCHVESCNRLDFLPFECVHCKNTFCSDHRTSDA-HVCDQVQTHILSDKEAKCSRTGTLFGCTFSECTQKELTPIACGLCAANFCVRHR--HAQDHKCKCLQSQAEHMPLTTKVVQKILESKKPA-EKTMSSKASISPTAQKVKLMKMKMHAAGEKNVPLADRVYFEVYFPKGHKVRSKPYHFSKLWTVGRAID 198
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BLAST of mRNA_Ecto-sp13_S_contig124.1988.1 vs. uniprot
Match: UPI001AE2900F (AN1-type zinc finger protein 1-like n=1 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=UPI001AE2900F)

HSP 1 Score: 58.5 bits (140), Expect = 5.530e-6
Identity = 53/202 (26.24%), Postives = 89/202 (44.06%), Query Frame = 1 
Query:    1 MAEFG--AKLCSYPGCRQHDFLPYACPACRQVFCSDHMAIGSGHRCDHGEEYLASRMGEGGRTAAPGSHPLSLSKPSEV------MSAVTSRFDGREKELNAATTHLNIKASEGEAGEGRTGAPDKLLKSSQLAMDKAATEKGKRVSTQVHRMLLKAKAVGEKKLRMEDRFFLEVHYCGNDTDVHHLFFSRLWTVGRALDDI 582
            MAEF      CS+P CRQ DFLP  C  C + FC++H +    H C +  +        G  +           K  E+      M  +T+    R  + +   +++  K   G+  E      +  L+S ++   K  T+K K+ + +V  M LK  A+G K +  +DR F ++     +     ++ S+ W+ G+ALD I
Sbjct:    1 MAEFTDIGSQCSFPSCRQLDFLPVKCNYCEENFCTEH-SFPEKHECPNFSQQEIKEKSHGPVSPLYFKCQFKDCKEKEIAEICCSMCHITTCLTHRHPKDHDCPSNVPGKDPLGDTKEH---IKNLNLESEEVKKRKLRTDKAKKTAARVQLMKLKMNAIGAKSIPTDDRIFFKIVLPKKNP--LSVYVSKDWSWGKALDSI 196
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BLAST of mRNA_Ecto-sp13_S_contig124.1988.1 vs. uniprot
Match: F7E585_ORNAN (Zinc finger AN1-type containing 1 n=2 Tax=Monotremata TaxID=9255 RepID=F7E585_ORNAN)

HSP 1 Score: 57.4 bits (137), Expect = 1.350e-5
Identity = 61/201 (30.35%), Postives = 83/201 (41.29%), Query Frame = 1 
Query:    1 MAEFG-AKLCSYPGCRQHDFLPYACPACRQVFCSDHMAIGSGHRCDHGEEYLASRMGEGGRTAAPGSHPLSLSKPSEVMSAVTSRFDGREKELNAATTHLNIKASEG-EAGEGRTGAPDKLL------KSSQLAMDKAATEKGKRVSTQVHRMLLKAKAVGEKKLRMEDRFFLEVHYC-GNDTDVHHLFFSRLWTVGRALD 576
            MAE    + C    CR+ DFLP+ C  C  VFC +H +  S H C        +   E  +     S+P SL K  +    V       EK       H    A E  E  + R  A  +L+      K  Q A  +    K    + QV  M LK  A G+K L   +R + +V    G+      +FFSR W+VGRA+D
Sbjct:    1 MAELEIGRQCRVERCRRRDFLPFICDGCSGVFCLEHRSRES-HDCPE-----VNIKPERAKADESPSYPCSL-KGCDKRELVPMLCPSCEKHFCLRHRHQADHACEKLEVPKPRMAATQQLVRDIVDSKKGQPACSRRRGVKNSGTAAQVALMKLKMHACGDKSLPQTERIYFQVFLPKGSREQSKPMFFSRTWSVGRAVD 194
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BLAST of mRNA_Ecto-sp13_S_contig124.1988.1 vs. uniprot
Match: B8CFG1_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CFG1_THAPS)

HSP 1 Score: 58.2 bits (139), Expect = 2.120e-5
Identity = 43/122 (35.25%), Postives = 62/122 (50.82%), Query Frame = 1 
Query:  217 KPSEVMSAVTSRFDGREKELNAATTHLNIKASEGEAGEGRTGAPDKLLKSSQLAMDKAATEKGKRVSTQVHRMLLKAKAVGEKKLRMEDRFFLEVHYCGNDTDV-----HHLFFSRLWTVGR 567
            KP+++ SAV  RFD  +                    + RT   D +L++    + ++   K K+VS QV  MLLK+++ G KKLRMEDRF LEV    + TD+      + FFSR  T G+
Sbjct:  215 KPTDIFSAVEQRFDQDDTLXXXXXXXXXXXXXXXXTEQQRTQRLDSILRN----LKQSKMSKNKKVSHQVRTMLLKSRSEGNKKLRMEDRFHLEVVRLEDCTDISGGATEYRFFSRQTTAGK 332
[Close]
BLAST of mRNA_Ecto-sp13_S_contig124.1988.1 vs. uniprot
Match: A0A8H7PMB8_MORIS (Uncharacterized protein n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7PMB8_MORIS)

HSP 1 Score: 56.6 bits (135), Expect = 3.310e-5
Identity = 24/72 (33.33%), Postives = 49/72 (68.06%), Query Frame = 1 
Query: 1066 MTITVGHGKSVYELGGVMPDRVSVLDLKRRLEPITGVPFLRQRLLFKGILRDGDKIGATKIVEGAKVMLLGT 1281
            +++ +    ++YEL      + ++LDLK+ L+ +TGVP  RQ+L+FKG++++   +   K+ +G+K+ML+G+
Sbjct:    6 LSLQISFKGALYELND-RDSQSTILDLKQHLQDLTGVPVERQKLMFKGLMKNEQTLSEAKVSQGSKIMLIGS 76
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig124.1988.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A6H5K1V2_9PHAE2.950e-25690.99Ubiquitin-like domain-containing protein n=1 Tax=E... [more]
D8LBN6_ECTSI5.690e-17791.17Ubiquitin-like domain-containing protein n=1 Tax=E... [more]
A0A4D9CUT0_9STRA1.930e-1131.62Ubiquitin-like domain-containing protein n=1 Tax=N... [more]
A0A7S3UX29_HETAK4.430e-1026.01Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
V5I0M0_IXORI9.200e-828.86AN1-type domain-containing protein n=4 Tax=Ixodes ... [more]
UPI001894C2294.490e-629.38AN1-type zinc finger protein 1-like isoform X4 n=1... [more]
UPI001AE2900F5.530e-626.24AN1-type zinc finger protein 1-like n=1 Tax=Lepeop... [more]
F7E585_ORNAN1.350e-530.35Zinc finger AN1-type containing 1 n=2 Tax=Monotrem... [more]
B8CFG1_THAPS2.120e-535.25Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A8H7PMB8_MORIS3.310e-533.33Uncharacterized protein n=1 Tax=Mortierella isabel... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig124contigEcto-sp13_S_contig124:12731..17554 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score63.2
Seed ortholog evalue3.6e-07
Seed eggNOG ortholog35128.Thaps11751
Model size1305
Hectar predicted targeting categoryother localisation
Exons6
EggNOG OGs2EMXZ@1,2SRGV@2759,2XD8D@2836
Ec32 ortholog descriptionAN1-type zinc finger and ubiquitin-like protein
Ec32 orthologEc-27_003310.1
Cds size1305
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig124.1988.1prot_Ecto-sp13_S_contig124.1988.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig124 12731..17554 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462659.627152-CDS-Ecto-sp13_S_contig124:12730..129581681462659.627152-CDS-Ecto-sp13_S_contig124:12730..12958Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig124 12731..12958 -
1681462659.6452136-CDS-Ecto-sp13_S_contig124:13542..139401681462659.6452136-CDS-Ecto-sp13_S_contig124:13542..13940Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig124 13543..13940 -
1681462659.6592302-CDS-Ecto-sp13_S_contig124:14428..145981681462659.6592302-CDS-Ecto-sp13_S_contig124:14428..14598Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig124 14429..14598 -
1681462659.6692214-CDS-Ecto-sp13_S_contig124:16269..164251681462659.6692214-CDS-Ecto-sp13_S_contig124:16269..16425Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig124 16270..16425 -
1681462659.6802397-CDS-Ecto-sp13_S_contig124:16784..169781681462659.6802397-CDS-Ecto-sp13_S_contig124:16784..16978Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig124 16785..16978 -
1681462659.691943-CDS-Ecto-sp13_S_contig124:17395..175541681462659.691943-CDS-Ecto-sp13_S_contig124:17395..17554Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig124 17396..17554 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig124.1988.1

>prot_Ecto-sp13_S_contig124.1988.1 ID=prot_Ecto-sp13_S_contig124.1988.1|Name=mRNA_Ecto-sp13_S_contig124.1988.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=435bp
MAEFGAKLCSYPGCRQHDFLPYACPACRQVFCSDHMAIGSGHRCDHGEEY
LASRMGEGGRTAAPGSHPLSLSKPSEVMSAVTSRFDGREKELNAATTHLN
IKASEGEAGEGRTGAPDKLLKSSQLAMDKAATEKGKRVSTQVHRMLLKAK
AVGEKKLRMEDRFFLEVHYCGNDTDVHHLFFSRLWTVGRALDDILKTRRR
YLRLKAGEEARPLELARVGASSGLPTGGILNNLPPEQLQLFDAVMVRPRT
LPPAGSSASDTPAEGGSSVSAVAAPGLNVEGAPDDLKGDGICGDEAPSEQ
QQRQTGQVLSTCSVGAKVSGCEEAGAGSGVTSAAAGPPATNASGGASEKG
GGGGGMTITVGHGKSVYELGGVMPDRVSVLDLKRRLEPITGVPFLRQRLL
FKGILRDGDKIGATKIVEGAKVMLLGTPAAASKK*
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mRNA from alignment at Ecto-sp13_S_contig124:12731..17554-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig124.1988.1 ID=mRNA_Ecto-sp13_S_contig124.1988.1|Name=mRNA_Ecto-sp13_S_contig124.1988.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4824bp|location=Sequence derived from alignment at Ecto-sp13_S_contig124:12731..17554- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCCGAGTTCGGGGCGAAGTTGTGCTCATACCCTGGCTGTCGTCAACA
CGACTTTCTTCCATATGCTTGCCCAGCGTGTCGCCAGGTATTTTGCTCCG
ATCACATGGCGATCGGCAGCGGGCATCGATGCGACCATGGAGAGGAGTAC
CTGGCGTCGGTGAGAGTCTGCTGGAGGTGACAACTACATACTATTGTAGT
CTACGCTGTAGGCGCGGCATCTACGCGTAGGTGTACGTCGGACATGTTCA
AGGTCTTACACTCTCGTGCGTAGCGTAAAGGAGTTACTGGGTGACATTAT
CTTTAGCAGCCTCCACACGAACAAATATTCAAGAGTGAAGACTACAGCAG
CAGCAGGAAGAGAGGCCTGTTACTGTTGCAGACTATCGCAGCAGGACGAG
TCTCTTTTACTGCTGTATATATACAGCAGTAGTCCATAGGGGACATGGGA
GTTCACGGACATCATCTACTGTACACGTAGCATACACATGAATATAGACA
AGCACAAGCGCAGTTTTTCATGTGTAAATGTCAGACTCAGAACGGATGCC
TTCTCACCCATCTCCTTTGGGTGCAGCGAATGGGCGAAGGCGGGAGGACC
GCTGCTCCAGGGTCACACCCTCTCTCGCTCAGCAAACCGTCTGAGGTGAT
GTCTGCCGTCACGTCTCGGTTCGACGGTCGCGAGAAGGAGCTCAACGCTG
CGACGACGCACTTGAATATCAAGGCTTCAGAGGGGGAAGCGGGTGAAGGA
CGCACTGGGGCACCTGACAAGTAAGAAAGAAACTAATAAAATACGGCAAC
GACGCCGTGTTCATGTGTCGCCCGTCACTCGCACATTGTGATTGAAGGAC
TCGCAGGTGCCGATGACTCTCTCCTGTCATTTCCCGCGCTCGTCAGAGGA
GTAACACTTCGTCTTAAACCTACCTAAGAGTCTTGACTACCGCATTCCGG
AACCCCAACTAACACCACCAGTTGAGTCACTTGTTGGTGTAAGTGCCTAC
AAGCTTTTTAGCCGTTGCTACTTTCAACAGACACCGCTCATTCTTGCGCT
TCTTCCCCGAGCAAGAATCCGCCAGGCAGCTCCAGGTACCCATGACCCCA
AACCAGCAACTTCCTTACGATACACCCAGGCTGTTGAAGAGCTCTCAGCT
AGCCATGGACAAGGCGGCCACGGAGAAGGGCAAGAGGGTGTCGACCCAGG
TCCATCGCATGCTTCTGAAGGCGAAAGCGGTGGGAGAAAAGAAGCTGCGA
ATGGAAGACCGCTTCTTCCTTGAGGTGCATTACTGGTGAGCGAGTTCTTA
GATCCAATCAAGCGTGCGCACTCTCTTTTTTCCAGGGTTGTTCACCGAGG
GTTTTTTTTCTACGGAGAGAGGAGGAGCAGAGCGGTTTGAACCTCTCGGC
TCCGTGAGAATTTGGTCCTCCGTTAAACCGCTCCGTGAGGTTTCCCAATG
CCTACAGTACGAGCATTTTTCACAGAGCGGGTTTGAGCTACTACGTCACG
TAAACCCCGGTATTTACCGCAGTATAGCTTCGGTTTTTCCACGGAGTCAC
GGGTTTTGCACGACACGATGTGTGTGCACCCACATAAAAACATCAAAACA
AACGAAACAATAAAAAACATGCGCACCTTCGCGCCGCCCCCCCCCCCCCC
CCCCCCCACATTACGTGCACCTTTGCATGGACAAGTGACAAGAGAAGAGA
GGGGGGTTGCATGGTTCGTGTATAGCCATTGTTGGCAGGCAGTATTGCTT
GGCAGGCAATATTGGTTGGCAGGCAATGACGCCCCCGACCGCGTCGAGAT
GGTTATGTTCCTCATGTGTCGAAGCCCGATCTTACCCCGGGGATGAAACA
GCAGTTGGACCATATGTATGTCACATGAGTAAGGGAAACTACTGACAATA
CAGCTCAGTCTGCTAGGAAGGCTTAACGCTGCAACTGTCCGAGCTTCTCG
AGCGGGAGAGCAAGTGGTTGTCGACTTCGAATCTAACTGAGTGCAACAGG
GACGTCTGTCTGTATTAGGGCGTCGTGCTCTCTTGTTGTGAGTTGTGAAT
GATACCTGAGACGCCTGGCGAATCCTAACACCGGCATGGCGAGTTCAAAC
AAGAGGGAGAGAGAGGCAAGTTTAGTACGTGTCGCAAAAACAAGTGGGTC
GAGGGGGTATCCATATGAGCGATGGTCCCTTCACCCGACTACGACTAACT
GATTGACTTTTTCGTTCGCTTGGGCTGTTCTGGCTCCCAGGACGCGTACG
GTGTCACGGGTGACCTCCACACACAGCCCCCACCGTGCAGAAATATCGAT
TGCCGATTTATCGAACCCAACGTATCGCTCAAAATCGCAGGTACCCCGTC
ACTATATACGGATATCCGAATGATTTCAACGTTTTTTTCGCACCGTGCAC
CGTCATCAAGGCCTCGGTTTCGCGCGGTTCATGCTACGGAGGAAATCAAA
CCGCTCAGTAAAAAAAGCGCCACGGATTCACCGCCCCTCTCCGCTCCGTG
ACACGAACACAAACAACAACTCCGCTCGTTCGGACTTTCCCCCTCGGATA
AACCGATCCGATCCGATCCGTGACTACTACAACAGGCAAAACCGCTCCGT
GAAAAAATTGAGTAAAAATATGATACGCGGAGCGGTTCTACACCATGAAC
AACCAAATCCTGCTACTGCTCGTCGGCTGAGTGCGTGCTTTGTTTTCTGT
CATTTGATTGTCGTACAATACGTAGGTTTGTCCAGGAAGCAGCGCTATTT
TTTTTATCATAGCGTATTTCAGCTGTCGTGTGGATCTTGGCACAAATTCT
TCGCTTCAAGAGAGGTTTTGAGGCAAATCTCGAGATGCTCCTCATCTCTG
TACCTCTCTGCCGCTCTGTTCCTGTGCCCCACCCGTGTTGGTCTTCTCCT
TTTCCTGTTCGTTTCGCTGTCCTCGGCCGGAAAAAATTCTGCCGTCTTGC
AAATAGTGGCAACGACACCGACGTGCACCACCTTTTCTTCTCCCGCCTGT
GGACGGTCGGCCGAGCTCTGGACGACATCTTAAAAACCCGGCGACGGTAT
CTGCGTCTGAAGGCTGGGGAGGAAGCTCGGCCGCTGGAGCTCGCGCGGGT
CGGCGCGAGTAGCGGGCTGCCAACAGGTGGGTACACGAGCGTGGTTGTCT
CTCGCCAAAACATGAAGTTAACACACGCGTCTTGCTGTGGCCCGAGAAAG
CGAAAGGGAGGTAGAGAATAAATCGTATATTCATGGCTGTATATCACTGG
TGCCCGATGCATTGATGTCCTTAACCGTAAGCGAGAGACCAGGGCTGGTC
TTGTCTTCCTTTGGTACATGCAACCTTGCTACGTGTGTCAGGTACACGAA
GAAATCCGGTTTGGGGGTTCTCGAGCAACCCAGTGTCTACGGGGCCCGCT
TTAAGGCTGCGTCCGTCGCCTGGGAGGTACCCTTCCTCTTGCAGATACAG
CCCGAGCAGCGGGTTGGTGAACCAGGCTGCGACGATCGTTCACGCGCCGA
CTCGACTTGGTGCAAGGTGTTGCTTGCACGCACGATGACACTTCGTGCAT
CTATTTACTTACCGAACCCCGACACACACTTGTCGTATGCACGAACTGCC
ATTTTTTTACCAAGGGGGGATCTTGAACAACTTACCCCCGGAGCAACTGC
AGTTGTTCGACGCTGTCATGGTGCGGCCACGAACCCTACCGCCAGCCGGT
TCATCTGCCTCCGATACCCCAGCGGAGGGAGGCAGCAGCGTCTCCGCCGT
CGCCGCTCCGGGGTTGAACGTGGAGGGCGCGCCGGATGACTTGAAAGGGG
ATGGTATTTGCGGTGACGAGGCGCCCTCGGAGCAACAGCAGCGACAGACG
GGACAAGTTTTGAGCACCTGTTCTGTAGGAGCGAAAGTATCAGGTTGTGA
AGAGGCGGGTGCAGGTTCGGGCGTGACGTCGGCGGCAGCAGGACCACCAG
CGACGAACGCCAGCGGCGGGGCTAGCGAAAAAGGAGGCGGAGGAGGGGGC
ATGACCATTACGGTGAGTCAATCGGGTGGAATGGTTCCGGGTTGCTCGTT
TCGCTTGTTTTGCATCCCAGAAGTCTGGGGGCACTTGCAAGACTTGCGGG
AAAGTCCCCGCCTTTTCCCGTCGACGCTGTCGAGGACATGCGGTTGTGTT
GCGTGGCCAAGGGGTGAAGCAAGGTTTTCCTGGTGTCCTGCCGCTCTTGT
TACGTTAGTTTTGTTTTACTGCGGGTGATCCCTTTTGGTTGTTCTCCCTC
CTGAACATCGCCGTGACCCGAAAGGATTTAATTCTGTCGGGGGTGGGCTC
CCTGCCCCAAATCCACAAGTTGATCACGTTTACAATGGTTGCGTTCATCG
TCCTACGCGCGCATTTAGCTTTATGCTTTTGCGTTGTGTGTCGGTGTGGT
AGACTATGCAGCATGCTCGACGAACATTAGGTTCACCGGCTAGCTCGCAG
CGCACTTCTTCTGCCGTTGTTTGTGTCCCGTCTCGCGTTTGCGAAACATT
TACGAAACATTTGCGAAACCGCTGCTGCTGCTGCTGCTGCTGCTGCTGCT
GCTGCTGCCACGGGTGCTCCGCCGCCCATGCCCGGCGACGGAAAAGGTTG
GCCATGGCAAGTCTGTCTACGAGCTTGGCGGCGTGATGCCCGACCGAGTG
AGCGTGCTTGACCTCAAGCGACGGCTGGAACCCATCACCGGCGTGCCGTT
CCTACGGCAGAGGCTCCTGTTCAAGGGCATTTTACGCGATGGGGACAAGA
TCGGCGCAACGAAGATTGTAGAGGGGGCAAAAGTCATGCTCCTTGGCACA
CCCGCTGCTGCTTCGAAAAAGTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig124:12731..17554-

>mRNA_Ecto-sp13_S_contig124.1988.1 ID=mRNA_Ecto-sp13_S_contig124.1988.1|Name=mRNA_Ecto-sp13_S_contig124.1988.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1305bp|location=Sequence derived from alignment at Ecto-sp13_S_contig124:12731..17554- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCCGAGTTCGGGGCGAAGTTGTGCTCATACCCTGGCTGTCGTCAACA
CGACTTTCTTCCATATGCTTGCCCAGCGTGTCGCCAGGTATTTTGCTCCG
ATCACATGGCGATCGGCAGCGGGCATCGATGCGACCATGGAGAGGAGTAC
CTGGCGTCGCGAATGGGCGAAGGCGGGAGGACCGCTGCTCCAGGGTCACA
CCCTCTCTCGCTCAGCAAACCGTCTGAGGTGATGTCTGCCGTCACGTCTC
GGTTCGACGGTCGCGAGAAGGAGCTCAACGCTGCGACGACGCACTTGAAT
ATCAAGGCTTCAGAGGGGGAAGCGGGTGAAGGACGCACTGGGGCACCTGA
CAAGCTGTTGAAGAGCTCTCAGCTAGCCATGGACAAGGCGGCCACGGAGA
AGGGCAAGAGGGTGTCGACCCAGGTCCATCGCATGCTTCTGAAGGCGAAA
GCGGTGGGAGAAAAGAAGCTGCGAATGGAAGACCGCTTCTTCCTTGAGGT
GCATTACTGTGGCAACGACACCGACGTGCACCACCTTTTCTTCTCCCGCC
TGTGGACGGTCGGCCGAGCTCTGGACGACATCTTAAAAACCCGGCGACGG
TATCTGCGTCTGAAGGCTGGGGAGGAAGCTCGGCCGCTGGAGCTCGCGCG
GGTCGGCGCGAGTAGCGGGCTGCCAACAGGGGGGATCTTGAACAACTTAC
CCCCGGAGCAACTGCAGTTGTTCGACGCTGTCATGGTGCGGCCACGAACC
CTACCGCCAGCCGGTTCATCTGCCTCCGATACCCCAGCGGAGGGAGGCAG
CAGCGTCTCCGCCGTCGCCGCTCCGGGGTTGAACGTGGAGGGCGCGCCGG
ATGACTTGAAAGGGGATGGTATTTGCGGTGACGAGGCGCCCTCGGAGCAA
CAGCAGCGACAGACGGGACAAGTTTTGAGCACCTGTTCTGTAGGAGCGAA
AGTATCAGGTTGTGAAGAGGCGGGTGCAGGTTCGGGCGTGACGTCGGCGG
CAGCAGGACCACCAGCGACGAACGCCAGCGGCGGGGCTAGCGAAAAAGGA
GGCGGAGGAGGGGGCATGACCATTACGGTTGGCCATGGCAAGTCTGTCTA
CGAGCTTGGCGGCGTGATGCCCGACCGAGTGAGCGTGCTTGACCTCAAGC
GACGGCTGGAACCCATCACCGGCGTGCCGTTCCTACGGCAGAGGCTCCTG
TTCAAGGGCATTTTACGCGATGGGGACAAGATCGGCGCAACGAAGATTGT
AGAGGGGGCAAAAGTCATGCTCCTTGGCACACCCGCTGCTGCTTCGAAAA
AGTGA
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