mRNA_Ecto-sp13_S_contig8483.19877.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig8483.19877.1
Unique NamemRNA_Ecto-sp13_S_contig8483.19877.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig8483.19877.1 vs. uniprot
Match: D7FPL8_ECTSI (Dynein heavy chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPL8_ECTSI)

HSP 1 Score: 642 bits (1656), Expect = 4.930e-208
Identity = 314/314 (100.00%), Postives = 314/314 (100.00%), Query Frame = 3 
Query:    3 ILTLANGDRMPMTDNVKAMFEVETLVNASPATVSRAGIIFVSDTDLDWSPVVEGWILKRPAAEQPVFTELFSRWMGASEPTNPGHCIDFLNRNTNQVMTASRVGVTAGLCDLITGMTSGAGCATLGPNLAIELEKLFVYSLIWSVGGLLEFEDRVKFDQWMRALDNNHVMPDLEEGETIFEYYVNLGTFEWEKWRPPLWEYPSTDVLDFSNLLVPTMDSTRALFLLRMLHKQRKAVLMVGAEGTAKTSTALMFFTELDPVKTAVKRINFSSATTPFMCQNSIEVELDKRGGKNFGPPGGKKMTIFMDDLSMPEV 944
            ILTLANGDRMPMTDNVKAMFEVETLVNASPATVSRAGIIFVSDTDLDWSPVVEGWILKRPAAEQPVFTELFSRWMGASEPTNPGHCIDFLNRNTNQVMTASRVGVTAGLCDLITGMTSGAGCATLGPNLAIELEKLFVYSLIWSVGGLLEFEDRVKFDQWMRALDNNHVMPDLEEGETIFEYYVNLGTFEWEKWRPPLWEYPSTDVLDFSNLLVPTMDSTRALFLLRMLHKQRKAVLMVGAEGTAKTSTALMFFTELDPVKTAVKRINFSSATTPFMCQNSIEVELDKRGGKNFGPPGGKKMTIFMDDLSMPEV
Sbjct: 2305 ILTLANGDRMPMTDNVKAMFEVETLVNASPATVSRAGIIFVSDTDLDWSPVVEGWILKRPAAEQPVFTELFSRWMGASEPTNPGHCIDFLNRNTNQVMTASRVGVTAGLCDLITGMTSGAGCATLGPNLAIELEKLFVYSLIWSVGGLLEFEDRVKFDQWMRALDNNHVMPDLEEGETIFEYYVNLGTFEWEKWRPPLWEYPSTDVLDFSNLLVPTMDSTRALFLLRMLHKQRKAVLMVGAEGTAKTSTALMFFTELDPVKTAVKRINFSSATTPFMCQNSIEVELDKRGGKNFGPPGGKKMTIFMDDLSMPEV 2618
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BLAST of mRNA_Ecto-sp13_S_contig8483.19877.1 vs. uniprot
Match: A0A6H5L5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5A5_9PHAE)

HSP 1 Score: 637 bits (1644), Expect = 1.950e-206
Identity = 312/314 (99.36%), Postives = 313/314 (99.68%), Query Frame = 3 
Query:    3 ILTLANGDRMPMTDNVKAMFEVETLVNASPATVSRAGIIFVSDTDLDWSPVVEGWILKRPAAEQPVFTELFSRWMGASEPTNPGHCIDFLNRNTNQVMTASRVGVTAGLCDLITGMTSGAGCATLGPNLAIELEKLFVYSLIWSVGGLLEFEDRVKFDQWMRALDNNHVMPDLEEGETIFEYYVNLGTFEWEKWRPPLWEYPSTDVLDFSNLLVPTMDSTRALFLLRMLHKQRKAVLMVGAEGTAKTSTALMFFTELDPVKTAVKRINFSSATTPFMCQNSIEVELDKRGGKNFGPPGGKKMTIFMDDLSMPEV 944
            ILTLANGDRMPMTDNVKAMFEVETLVNASPATVSRAGIIFVSDTDLDWSPVVEGWILKRPAAEQPVFTELFSRWMGASEPTNPGHCIDFLNRNTNQVMTASRVGVTAGLCDLITGMTSG+GCATLGPNLAIELEKLFVYSLIWSVGGLLEFEDRVKFDQWMRALD NHVMPDLEEGETIFEYYVNLGTFEWEKWRPPLWEYPSTDVLDFSNLLVPTMDSTRALFLLRMLHKQRKAVLMVGAEGTAKTSTALMFFTELDPVKTAVKRINFSSATTPFMCQNSIEVELDKRGGKNFGPPGGKKMTIFMDDLSMPEV
Sbjct: 2006 ILTLANGDRMPMTDNVKAMFEVETLVNASPATVSRAGIIFVSDTDLDWSPVVEGWILKRPAAEQPVFTELFSRWMGASEPTNPGHCIDFLNRNTNQVMTASRVGVTAGLCDLITGMTSGSGCATLGPNLAIELEKLFVYSLIWSVGGLLEFEDRVKFDQWMRALDINHVMPDLEEGETIFEYYVNLGTFEWEKWRPPLWEYPSTDVLDFSNLLVPTMDSTRALFLLRMLHKQRKAVLMVGAEGTAKTSTALMFFTELDPVKTAVKRINFSSATTPFMCQNSIEVELDKRGGKNFGPPGGKKMTIFMDDLSMPEV 2319
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BLAST of mRNA_Ecto-sp13_S_contig8483.19877.1 vs. uniprot
Match: A0A835YLK0_9STRA (Dynein heavy chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLK0_9STRA)

HSP 1 Score: 526 bits (1355), Expect = 1.350e-167
Identity = 245/314 (78.03%), Postives = 280/314 (89.17%), Query Frame = 3 
Query:    3 ILTLANGDRMPMTDNVKAMFEVETLVNASPATVSRAGIIFVSDTDLDWSPVVEGWILKRPAAEQPVFTELFSRWMGASEPTNPGHCIDFLNRNTNQVMTASRVGVTAGLCDLITGMTSGAGCATLGPNLAIELEKLFVYSLIWSVGGLLEFEDRVKFDQWMRALDNNHVMPDLEEGETIFEYYVNLGTFEWEKWRPPLWEYPSTDVLDFSNLLVPTMDSTRALFLLRMLHKQRKAVLMVGAEGTAKTSTALMFFTELDPVKTAVKRINFSSATTPFMCQNSIEVELDKRGGKNFGPPGGKKMTIFMDDLSMPEV 944
            ILTLANGDR+PMTDNVKAMFEVETLVNASPATVSRAGIIFVSDTDLDW+PVVE W+ KRP   QP+  +L  +W+G  +PTNPGHC+DFLNRNT QVMTASRVG+ +GLCDL+TG+  GAG AT+G +L +ELE+LF+YSL+WSVGGLLEFEDRV+FD W+R  D N  MP +EEGET++EY+V     +W+KW PP W+YP+T+VLDFSNLLVPTMDSTRALFLLRMLHKQR+AVLMVGAEGTAKTSTALMFF+ELDP K A+KRINFSSATTPFMCQN+IEVELDKRGGKNFGPPGGKKMTIFMDDLSMPE+
Sbjct: 2304 ILTLANGDRIPMTDNVKAMFEVETLVNASPATVSRAGIIFVSDTDLDWAPVVEAWVRKRPTDHQPILRDLIRKWLGECDPTNPGHCMDFLNRNTQQVMTASRVGLCSGLCDLLTGLVEGAGAATIGADLPLELERLFLYSLVWSVGGLLEFEDRVRFDAWLRERDTNKQMPKVEEGETVYEYFVRADNTQWQKWAPPHWKYPNTEVLDFSNLLVPTMDSTRALFLLRMLHKQRRAVLMVGAEGTAKTSTALMFFSELDPAKMAMKRINFSSATTPFMCQNAIEVELDKRGGKNFGPPGGKKMTIFMDDLSMPEI 2617
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BLAST of mRNA_Ecto-sp13_S_contig8483.19877.1 vs. uniprot
Match: A0A662XTF2_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XTF2_9STRA)

HSP 1 Score: 423 bits (1087), Expect = 2.550e-137
Identity = 204/318 (64.15%), Postives = 249/318 (78.30%), Query Frame = 3 
Query:    3 ILTLANGDRMPMTDNVKAMFEVETLVNASPATVSRAGIIFVSDTDLDWSPVVEGWILKRPAAEQPVFTELFSRWMGASEPTNPGHCIDFLNRNTNQVMTASRVGVTAGLCDLITGMTSGAGCATLGPN---LAIELEKLFVYSLIWSVGGLLEFEDRVKFDQWMRALDNNHVMPDLEEGETIFEYYVNLGTFEWEKWRPPLWEYPS-TDVLDFSNLLVPTMDSTRALFLLRMLHKQRKAVLMVGAEGTAKTSTALMFFTELDPVKTAVKRINFSSATTPFMCQNSIEVELDKRGGKNFGPPGGKKMTIFMDDLSMPEV 944
            ILTLANGDRMPMTDNVK MFEVETLVNASPATVSRAGI+++SDTDLDW+PVVE WI KRP   Q +  +LF ++MG + P NPGHC D+LNRNT  VM  SR+G  + L +L+TG+  G     L  +   LAI+LEKL++Y L WS+G LLE +DRVKFD+W+R  D+N ++P  E G+T +EY+V   +FEW+ WRP  WEYP  +  LDFSNLLVPTMDS R L+L+  LHKQRK VLMVG  GTAKTS+ALMFF +L+P +  +KR+NFSSATTPFM QN++E ELDKRGGK+FGPPGGKKMT+F+DDLSMP V
Sbjct:  577 ILTLANGDRMPMTDNVKLMFEVETLVNASPATVSRAGIVYISDTDLDWAPVVEAWIRKRPQTHQAILRDLFMKYMGENTPINPGHCFDYLNRNTEGVMPVSRIGQASRLFNLLTGLLLGEHGNNLSEDPAKLAIQLEKLYLYCLCWSLGSLLEQDDRVKFDEWLRQYDDNALLPKCEPGQTAYEYFVEPQSFEWKVWRPAKWEYPKGSKQLDFSNLLVPTMDSVRTLYLIENLHKQRKPVLMVGGPGTAKTSSALMFFNDLNPDQMMIKRVNFSSATTPFMFQNAVEGELDKRGGKSFGPPGGKKMTVFLDDLSMPLV 894
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BLAST of mRNA_Ecto-sp13_S_contig8483.19877.1 vs. uniprot
Match: A0A482RUT6_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RUT6_9ARCH)

HSP 1 Score: 430 bits (1106), Expect = 4.640e-137
Identity = 206/315 (65.40%), Postives = 249/315 (79.05%), Query Frame = 3 
Query:    3 ILTLANGDRMPMTDNVKAMFEVETLVNASPATVSRAGIIFVSDTDLDWSPVVEGWILKRPAAEQPVFTELFSRWMGASEPTNPGHCIDFLNRNTNQVMTASRVGVTAGLCDLITGMTSGAGCATLGPNLAIELEKLFVYSLIWSVGGLLEFEDRVKFDQWMRALDNNHVMPDLEEGETIFEYYVNLGTFEWEKWRPPLWEYP-STDVLDFSNLLVPTMDSTRALFLLRMLHKQRKAVLMVGAEGTAKTSTALMFFTELDPVKTAVKRINFSSATTPFMCQNSIEVELDKRGGKNFGPPGGKKMTIFMDDLSMPEV 944
            ILTLANGDR+PMT NVK MFEVETLVNASPATVSRAGII+VS+TDLD+SP  EGW+ K+P ++Q +   L  R++G S PT+PG C D+LNRN +QVMT SRVG T+ LCDL  G+T G G   +  +    +EK+F+Y L+W+VGGLLE + RVKFD ++R LD N +MP  E G TI+EY+V+  T  W  W+PP+W YP  T+ LDFSNLLVPTMDSTRA++    +HKQ+KAV MVG EGTAKTSTALMFF  LDP +  VKR+NFSSATTPFMCQ++IEVEL+KRGG+NFGPPGGK MTIFMDDLSMPEV
Sbjct:  618 ILTLANGDRIPMTANVKIMFEVETLVNASPATVSRAGIIYVSETDLDFSPTTEGWVRKQPTSQQSILRALIQRYLGTSSPTDPGQCFDWLNRNVSQVMTTSRVGTTSALCDLFKGLTDGKGSLDISVDTEARMEKIFLYCLVWTVGGLLEADARVKFDGFLRTLDKNGMMPKCEAGLTIYEYWVHNETGVWTLWKPPVWNYPVGTEKLDFSNLLVPTMDSTRAIYNCTHMHKQKKAVCMVGGEGTAKTSTALMFFRTLDPAEMLVKRVNFSSATTPFMCQSAIEVELEKRGGRNFGPPGGKAMTIFMDDLSMPEV 932
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BLAST of mRNA_Ecto-sp13_S_contig8483.19877.1 vs. uniprot
Match: A0A7S4NI05_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NI05_9STRA)

HSP 1 Score: 429 bits (1103), Expect = 9.010e-134
Identity = 210/317 (66.25%), Postives = 245/317 (77.29%), Query Frame = 3 
Query:    3 ILTLANGDRMPMTDNVKAMFEVETLVNASPATVSRAGIIFVSDTDLDWSPVVEGWILKRP-AAEQPVFTELFSRWMGASEPTNPGHCIDFLNRNTNQVMTASRVGVTAGLCDLITGMTSGAGCATLGPN--LAIELEKLFVYSLIWSVGGLLEFEDRVKFDQWMRALDNNHVMPDLEEGETIFEYYVNLGTFEWEKWRPPLWEYPSTDVLDFSNLLVPTMDSTRALFLLRMLHKQRKAVLMVGAEGTAKTSTALMFFTELDPVKTAVKRINFSSATTPFMCQNSIEVELDKRGGKNFGPPGGKKMTIFMDDLSMPEV 944
            ILTLANGDRMPMTDNVK MFEVETLVNASPATVSRAGII+VSDTDLDW+PV+E W+ KRP AA Q +  +L ++W+G   PT+PG C DFL+RNT +VM   RVG       L  G+T G  CA LG +  L + LEK+FVYSL WSVG LLE EDR+KFDQW+R  D N +MP++ EGETI+EY+VN  T +WEKW PP WEYP  D LDFSNLLVPTMDSTRAL++++ +HKQ+  VL+VGAEGTAKTS  LMF    +  +   KRINFSSATTP M Q SIE ELDKRGGKNFGPP GKKMT+F DD+SMPEV
Sbjct:  582 ILTLANGDRMPMTDNVKMMFEVETLVNASPATVSRAGIIYVSDTDLDWAPVIEAWVRKRPDAARQTMLRDLITKWIGQCTPTDPGPCFDFLSRNTAEVMQEGRVGKILSFAQLFQGLTEGPECAFLGVSNDLCVGLEKIFVYSLCWSVGALLEAEDRMKFDQWLRDRDTNKIMPEISEGETIYEYFVNPDTCQWEKWAPPRWEYPQGDKLDFSNLLVPTMDSTRALYVIKNIHKQKGPVLVVGAEGTAKTSVNLMFLGSQNANQMLTKRINFSSATTPGMAQYSIEAELDKRGGKNFGPPNGKKMTVFFDDVSMPEV 898
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BLAST of mRNA_Ecto-sp13_S_contig8483.19877.1 vs. uniprot
Match: H3GWH2_PHYRM (Uncharacterized protein n=2 Tax=Peronosporaceae TaxID=4777 RepID=H3GWH2_PHYRM)

HSP 1 Score: 429 bits (1102), Expect = 1.250e-133
Identity = 205/318 (64.47%), Postives = 252/318 (79.25%), Query Frame = 3 
Query:    3 ILTLANGDRMPMTDNVKAMFEVETLVNASPATVSRAGIIFVSDTDLDWSPVVEGWILKRPAAEQPVFTELFSRWMGASEPTNPGHCIDFLNRNTNQVMTASRVGVTAGLCDLITGMTSGAGCATLGPN---LAIELEKLFVYSLIWSVGGLLEFEDRVKFDQWMRALDNNHVMPDLEEGETIFEYYVNLGTFEWEKWRPPLWEYPS-TDVLDFSNLLVPTMDSTRALFLLRMLHKQRKAVLMVGAEGTAKTSTALMFFTELDPVKTAVKRINFSSATTPFMCQNSIEVELDKRGGKNFGPPGGKKMTIFMDDLSMPEV 944
            ILTLANGDRMPMTDNVK MFEVETLVNASPATVSRAGI+F+SDTDLDW+PVVE WI KRP   Q +  +LF ++MG + P NPGHC D+LNRNTN VMT SR+G  + L +L+TG+  G    TL  +   +AI+LEKL++Y + WS+G +LE EDRVKFD+W+R  D+N ++P  E G+T++EY+V+  T++W+ WRP  WEYP  +  LDFSNLLVPTMDS R L+L+  LHKQRK VLMVG  GTAKTS+ALMFF +L P    +KR+NFSSATTPFM QN++E ELDKRGGK+FGPPGGKKMT+F+DDLSMP V
Sbjct: 2288 ILTLANGDRMPMTDNVKLMFEVETLVNASPATVSRAGIVFISDTDLDWAPVVEAWIRKRPQTHQQILRDLFMKYMGENNPINPGHCFDYLNRNTNGVMTVSRIGQASRLYNLMTGLLLGDHGTTLSEDPAKMAIQLEKLYLYCICWSLGSILEQEDRVKFDEWLRQYDDNALLPKCEPGQTVYEYFVDPQTWDWKVWRPAKWEYPKGSKQLDFSNLLVPTMDSVRTLYLIENLHKQRKPVLMVGGPGTAKTSSALMFFNDLSPDIMMIKRVNFSSATTPFMFQNAVESELDKRGGKSFGPPGGKKMTVFLDDLSMPLV 2605
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BLAST of mRNA_Ecto-sp13_S_contig8483.19877.1 vs. uniprot
Match: K3WIV7_GLOUD (Uncharacterized protein n=36 Tax=Oomycota TaxID=4762 RepID=K3WIV7_GLOUD)

HSP 1 Score: 425 bits (1092), Expect = 2.850e-132
Identity = 202/318 (63.52%), Postives = 252/318 (79.25%), Query Frame = 3 
Query:    3 ILTLANGDRMPMTDNVKAMFEVETLVNASPATVSRAGIIFVSDTDLDWSPVVEGWILKRPAAEQPVFTELFSRWMGASEPTNPGHCIDFLNRNTNQVMTASRVGVTAGLCDLITGMTSGAGCATLGPN---LAIELEKLFVYSLIWSVGGLLEFEDRVKFDQWMRALDNNHVMPDLEEGETIFEYYVNLGTFEWEKWRPPLWEYPS-TDVLDFSNLLVPTMDSTRALFLLRMLHKQRKAVLMVGAEGTAKTSTALMFFTELDPVKTAVKRINFSSATTPFMCQNSIEVELDKRGGKNFGPPGGKKMTIFMDDLSMPEV 944
            ILTLANGDRMPMT+NVK MFEVETLVNASPATVSRAGI+F+SDTDLDW+PVVE WI KRPA++Q +  +LF ++MG + P NPGHC D+LNRNTN VM  SRVG  + L +L+TG+  G     L  +   LAI+ EKL++Y + WS+G +LE +DR KFD+W+R  D+N ++P  E G+T++EY+V+  T+EW+ WRPP W+YP  +  LDFSNLLVPTMDS R L+L+  LHKQRK VLMVG  GTAKTS+ALMFF +L+P    +KR+NFSSATT FM QN++E ELDKRGGK+FGPPGGKKMT+F+DDLSMP V
Sbjct: 2303 ILTLANGDRMPMTENVKLMFEVETLVNASPATVSRAGIVFISDTDLDWAPVVEAWIRKRPASQQQILRDLFMKYMGENSPINPGHCFDYLNRNTNGVMPVSRVGQASRLFNLLTGLLLGEHGLNLSEDPAKLAIQFEKLYLYCICWSLGAILEQDDRNKFDEWLRQYDDNMLLPKCEPGQTVYEYFVHPQTYEWKVWRPPKWDYPKDSKTLDFSNLLVPTMDSVRTLYLIENLHKQRKPVLMVGGPGTAKTSSALMFFNDLNPDHMMIKRVNFSSATTAFMFQNAVESELDKRGGKSFGPPGGKKMTVFLDDLSMPLV 2620
[Close]
BLAST of mRNA_Ecto-sp13_S_contig8483.19877.1 vs. uniprot
Match: A0A2D4BGN6_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BGN6_PYTIN)

HSP 1 Score: 419 bits (1078), Expect = 2.080e-130
Identity = 199/319 (62.38%), Postives = 248/319 (77.74%), Query Frame = 3 
Query:    3 ILTLANGDRMPMTDNVKAMFEVETLVNASPATVSRAGIIFVSDTDLDWSPVVEGWILKRPAAEQPVFTELFSRWMGASEPTNPGHCIDFLNRNTNQVMTASRVGVTAGLCDLITGMTSGAGCATLGPN----LAIELEKLFVYSLIWSVGGLLEFEDRVKFDQWMRALDNNHVMPDLEEGETIFEYYVNLGTFEWEKWRPPLWEYP-STDVLDFSNLLVPTMDSTRALFLLRMLHKQRKAVLMVGAEGTAKTSTALMFFTELDPVKTAVKRINFSSATTPFMCQNSIEVELDKRGGKNFGPPGGKKMTIFMDDLSMPEV 944
            ILTLANGDRMPMT+NVK MFEVETLVNASPATVSRAGI+F+SDTDLDW+PVVE WI KRP   Q +  +LF ++MG + P NPGHC D++NRN + VMT SRVG  + L  L TG+  G    T+       L ++ EKLF+Y L WS+G LLE +DR+KFD+W+R  D+N ++P  E G+T++E++V+  ++EW+ WRPP WEYP     LDFSNLLVPTMDS R L+L+  LHKQR+ VLMVG  GTAKTS+ALMFF +L+P +  +KR+NFSSATTPFM QN++E ELDKRGGK+FGPPGGKKMT+F+DDLSMP V
Sbjct: 2026 ILTLANGDRMPMTENVKLMFEVETLVNASPATVSRAGIVFISDTDLDWAPVVEAWIRKRPEGHQAILRDLFMKYMGENNPLNPGHCFDYINRNLSGVMTVSRVGQASRLFHLFTGLLLGEHGTTISEGDPAKLTLQFEKLFLYCLCWSLGALLEQDDRLKFDEWLRQYDDNLLLPKCEPGQTVYEFFVDPQSWEWKVWRPPKWEYPRGAKTLDFSNLLVPTMDSVRTLYLIENLHKQRRPVLMVGGPGTAKTSSALMFFNDLNPDQMIIKRVNFSSATTPFMFQNAVESELDKRGGKSFGPPGGKKMTVFLDDLSMPLV 2344
[Close]
BLAST of mRNA_Ecto-sp13_S_contig8483.19877.1 vs. uniprot
Match: A0A5D6XS34_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XS34_9STRA)

HSP 1 Score: 419 bits (1077), Expect = 2.930e-130
Identity = 200/319 (62.70%), Postives = 250/319 (78.37%), Query Frame = 3 
Query:    3 ILTLANGDRMPMTDNVKAMFEVETLVNASPATVSRAGIIFVSDTDLDWSPVVEGWILKRPAAEQPVFTELFSRWMGASEPTNPGHCIDFLNRNTNQVMTASRVGVTAGLCDLITGMTSGAGCATLGPN----LAIELEKLFVYSLIWSVGGLLEFEDRVKFDQWMRALDNNHVMPDLEEGETIFEYYVNLGTFEWEKWRPPLWEYPS-TDVLDFSNLLVPTMDSTRALFLLRMLHKQRKAVLMVGAEGTAKTSTALMFFTELDPVKTAVKRINFSSATTPFMCQNSIEVELDKRGGKNFGPPGGKKMTIFMDDLSMPEV 944
            ILTLANGDRMPMTDNVK MFEVETLVNASPATVSRAGI+FVSDTDLDW+PVVE W+ +RPAA QP+  +LF ++MG + P NPG C D+LNRNT+ VMT SR+G  + L  L+TG+  G    +L  +    LA+++EKLF+Y L WS+G +LE +DR KFD+W+R  D+N ++P  E G+T++E+YV+  +FEW+ WRPP WEYP     LDFSNLLVPTMDS R L+L+  LHKQR+ VL+VG  GTAKTS ALM+F  L+P +  +KR+NFSSATT FM Q ++E ELDKRGGK+FGPPGGKKMT+F+DDLSMP V
Sbjct: 1980 ILTLANGDRMPMTDNVKLMFEVETLVNASPATVSRAGIVFVSDTDLDWAPVVEAWVRRRPAAHQPILRDLFLKYMGENSPVNPGQCFDYLNRNTSGVMTVSRIGQASRLFHLLTGLLLGEHGQSLDESDAGRLAVQVEKLFLYCLCWSLGAVLEQDDRFKFDEWLRQYDDNGLLPKCEAGQTVYEHYVHPQSFEWKVWRPPTWEYPKEAKQLDFSNLLVPTMDSVRTLYLIENLHKQRRPVLLVGGPGTAKTSCALMYFNGLNPDQMLIKRVNFSSATTAFMFQTAVESELDKRGGKSFGPPGGKKMTVFLDDLSMPLV 2298
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8483.19877.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPL8_ECTSI4.930e-208100.00Dynein heavy chain n=1 Tax=Ectocarpus siliculosus ... [more]
A0A6H5L5A5_9PHAE1.950e-20699.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YLK0_9STRA1.350e-16778.03Dynein heavy chain n=1 Tax=Tribonema minus TaxID=3... [more]
A0A662XTF2_9STRA2.550e-13764.15Uncharacterized protein (Fragment) n=1 Tax=Nothoph... [more]
A0A482RUT6_9ARCH4.640e-13765.40Uncharacterized protein (Fragment) n=1 Tax=archaeo... [more]
A0A7S4NI05_9STRA9.010e-13466.25Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
H3GWH2_PHYRM1.250e-13364.47Uncharacterized protein n=2 Tax=Peronosporaceae Ta... [more]
K3WIV7_GLOUD2.850e-13263.52Uncharacterized protein n=36 Tax=Oomycota TaxID=47... [more]
A0A2D4BGN6_PYTIN2.080e-13062.38Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A5D6XS34_9STRA2.930e-13062.70Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig8483contigEcto-sp13_S_contig8483:3567..6632 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score629.0
Seed ortholog evalue1.1e-177
Seed eggNOG ortholog2880.D7FPL8
Model size945
KEGG koko:K10408
KEGG Pathwayko05016,map05016
Hectar predicted targeting categoryother localisation
GOsGO:0000226,GO:0001539,GO:0001578,GO:0003341,GO:0005575,GO:0005623,GO:0005929,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0008150,GO:0009987,GO:0016043,GO:0022607,GO:0030030,GO:0030031,GO:0031514,GO:0034622,GO:0035082,GO:0036158,GO:0040011,GO:0042995,GO:0043226,GO:0043933,GO:0044085,GO:0044464,GO:0044782,GO:0048870,GO:0051179,GO:0051674,GO:0060271,GO:0060285,GO:0060294,GO:0065003,GO:0070286,GO:0070925,GO:0071840,GO:0120025,GO:0120031,GO:0120036
Exons7
EggNOG free text desc.dynein light chain binding
EggNOG OGsCOG5245@1,KOG3595@2759
Cds size915
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04812
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig8483.19877.1prot_Ecto-sp13_S_contig8483.19877.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig8483 3567..6603 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464118.3099828-CDS-Ecto-sp13_S_contig8483:3566..37111681464118.3099828-CDS-Ecto-sp13_S_contig8483:3566..3711Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8483 3567..3711 -
1681464118.3237123-CDS-Ecto-sp13_S_contig8483:3941..41601681464118.3237123-CDS-Ecto-sp13_S_contig8483:3941..4160Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8483 3942..4160 -
1681464118.3344448-CDS-Ecto-sp13_S_contig8483:4506..46231681464118.3344448-CDS-Ecto-sp13_S_contig8483:4506..4623Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8483 4507..4623 -
1681464118.3465292-CDS-Ecto-sp13_S_contig8483:5020..51931681464118.3465292-CDS-Ecto-sp13_S_contig8483:5020..5193Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8483 5021..5193 -
1681464118.3621018-CDS-Ecto-sp13_S_contig8483:5679..57491681464118.3621018-CDS-Ecto-sp13_S_contig8483:5679..5749Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8483 5680..5749 -
1681464118.3729403-CDS-Ecto-sp13_S_contig8483:6027..61821681464118.3729403-CDS-Ecto-sp13_S_contig8483:6027..6182Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8483 6028..6182 -
1681464118.385357-CDS-Ecto-sp13_S_contig8483:6567..66031681464118.385357-CDS-Ecto-sp13_S_contig8483:6567..6603Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig8483 6568..6603 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681464118.3975668-UTR-Ecto-sp13_S_contig8483:6603..66321681464118.3975668-UTR-Ecto-sp13_S_contig8483:6603..6632Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig8483 6604..6632 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig8483.19877.1

>prot_Ecto-sp13_S_contig8483.19877.1 ID=prot_Ecto-sp13_S_contig8483.19877.1|Name=mRNA_Ecto-sp13_S_contig8483.19877.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=305bp
MPMTDNVKAMFEVETLVNASPATVSRAGIIFVSDTDLDWSPVVEGWILKR
PAAEQPVFTELFSRWMGASEPTNPGHCIDFLNRNTNQVMTASRVGVTAGL
CDLITGMTSGAGCATLGPNLAIELEKLFVYSLIWSVGGLLEFEDRVKFDQ
WMRALDNNHVMPDLEEGETIFEYYVNLGTFEWEKWRPPLWEYPSTDVLDF
SNLLVPTMDSTRALFLLRMLHKQRKAVLMVGAEGTAKTSTALMFFTELDP
VKTAVKRINFSSATTPFMCQNSIEVELDKRGGKNFGPPGGKKMTIFMDDL
SMPEV
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mRNA from alignment at Ecto-sp13_S_contig8483:3567..6632-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig8483.19877.1 ID=mRNA_Ecto-sp13_S_contig8483.19877.1|Name=mRNA_Ecto-sp13_S_contig8483.19877.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3066bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8483:3567..6632- (Ectocarpus species13 EcNAP12_S_4_19m)
AGATCTTGACCCTCGCCAACGGAGACCGCATGCCCATGACCGACAATGTG
AAGGCAATGTTCGAGGTACGCTCACAAGTGTTGTTGGTCGGGTTCGTGAA
GGAAAAGTAGCAAGCGAACGACGCGCTGCGACCGCACGCGAACTAACAGC
TTTCAGATGCGGGAAACAAGTAAGGATTTTTGGTAGGAACAAGACCATGC
CAACCGGGATCATGTCAATGACCAAACGCCGGATGCATGGACAGTCATGT
GTCGTGTAATGTCAGAGCTACTTTATAGACGGAATCTCTCTCTTCCAAGA
TCTGGTCAGACGATATCGGTCGGGTCGCACAGGTGACACACTACTACCCC
TTGTTCTGTCTCCGCCCCGAAAGGTAGACCAATGGCGAATGCCACTGCGT
CAAACGTCTACTCCCCTAATGGTCTTGCGAATTGTTGACTTTTATCTCAG
GTGGAAACCTTGGTAAACGCCTCTCCAGCAACGGTGTCTCGAGCTGGCAT
CATCTTCGTGTCGGACACTGACCTCGACTGGTCACCAGTAGTGGAGGGCT
GGATCTTGAAGCGGCCCGCGGCAGAGCAACCCGTCTTCACCGAACTGTTC
TCCAGGTTTGGACGATCCCTAGCAGGATACTGTCTCGCACAGTTCACACG
ACCGGTGTTGAATCCCTACACTGCTGTTGCGCTTGTATTGAGTCTCATGG
ATTGGTACGACGCTTACGAGGGTTGCGATCATAGGACGAATCATCCAGCA
GAGGCGATGATACCGACCGCTCGTTTTGTGCAGTACACAGATTACCTTAC
AGATTGGAGCATGTACGAGTCTACATAGGGCGATTGAAAGTATGGGTCAC
GTTTTGGTTGTTGTGTTGCGGACTCGATGGCAGGTGGATGGGTGCGAGTG
AGCCCACCAACCCGGGACACTGTATCGACTTCCTCAACCGCAACACAAAC
CAGGTGTGGTCCAGGCATGCCATGGTCTACCGCACGGTGACACACTTGGC
TGAAACAATGCAACATTTACAGTATCTTCCTTCGACGTTCGGGTATCTTG
CGTGTAAGCGATTCGCCGGTGGACATGAAGTTATTTTCAACACGGCGGCG
ACCATGCGTACGTATCTATACCACGGAGTTGTGTGCTGTTTCCACAACCC
CGCTTACCCTCTGTGTGCGGCCTCAGTTGCTCTACGGTTTCTTCTCAAAG
CAAGTCTTCGTTTGAGAAATTTACAGCACTGGTACCTACGTCGAGATTTC
ATCTCACCCCTTGCCGGATGGCATCATTGTAATGCGGTGTTCTTCCATTT
GCCAGTGGTTCAGGATTTTTTCTTCGGCTTCCCACAGCTGAGTACTTCGA
CGGTATGCATAGTGTATCCTCTAAACACCCACCCAGAAGAAATGCTTTGA
TTGCTGTGAATAAATGCTTTGGTTGCGATACATTTATAGGTCATGACCGC
TAGTCGCGTCGGGGTGACTGCGGGACTGTGCGACCTCATCACTGGAATGA
CCTCTGGGGCTGGCTGCGCCACGCTGGGACCCAACCTCGCCATCGAGTTG
GAGAAGCTCTTCGTCTACTCGCTCATTTGGTCTGTCGGCGGATTGCTTGA
ATTCGAAGACAGGTCGGTGGCTAAGCATGTTTCGCGCAACTCGTGGGTTG
TTCGGCCAAAACTTCACATTTATGTTGAAACACCCCCACGTTGAGGGTAG
TTTCGGTCCACTGTCATATAGTGGCTCGTGCTACAGGACGAGTTTTGTTT
GCGTATGCGCAAATTGAGACACATCGGTTCTTGTTTCTCTACCATGTGGC
ACGTACATATATCGACGCCTACCCCGAGAAGCGGAGATGTTTGATCAACT
GGTGAAGCATCACTGGTCATGATGTTCCATGTGCATGAGAACCTGTGTCG
CACGCAGTGACCCATCAGCAAAGATGTCCCCGTTCTTCGGTGTAGAAACA
TGCCACGTAGGAAGTCAACCGTGGATACTCTTTGTACTTTTGGCTCGGGG
TTACAACAGGGTGAAGTTCGACCAGTGGATGCGCGCTCTGGACAACAACC
ACGTCATGCCGGACTTGGAGGAAGGCGAGACCATTTTCGAGTACTACGTC
AACTTGGGCACCTTCGAATGGGAAAAGTGAGTTTCGTGTCGATGGTCATG
AAACATCATCCAGTGTTGAATTAGCGATGCTATGAGCTCCAACGTAGCGT
GGGTGGTTGAACTTTCGGTGAACCGCTTGGAAATGTTCCAAAGGTCGATT
GATCTGGTTCGGCTTTCGTCGGCGTCAAGTTGCTGGACTCTCTTCCATTG
TGTGTTGCCGTTGTTGTGATCTATTTTGTGGATGTCTTAACGTACTTTGG
GCTATTCAAGAAACCATGACGCCAAGCTGACGGAAACGGAGGCCGTTCAC
CGTTTCCGACCTGTCCCCATCGACACACGCGCCCAAAAAACAAATTTCCA
AACGCTGTTTGTCCTCCCGCAGGTGGCGCCCCCCTCTGTGGGAGTACCCT
TCGACGGATGTGCTCGATTTCTCGAACTTGCTCGTGCCCACAATGGACTC
GACGCGTGCCCTGTTCCTCCTGCGGATGCTGCACAAGCAGAGGAAGGCAG
TGCTCATGGTCGGGGCAGAGGGGACTGCGAAGACGTCGACGGCACTCATG
TTCTTCACTGAGCTGGACCCTGTCAAAACCGCGGTCAAGAGGTTTGTGCC
CGAAAAAGCCCGGTCTGATCGTGACAGTCACACACTGTGAATAGTAGATG
CCCCCCCCAAAGCTTTGTTTGTCCAAACGTTCGACGATGCACCTGCACGT
CCGTTTACGAACCAAATCTAGATGCTTCCGTTCATATCCGGTTGACCTGA
TTTAGCATATCAGCGTAAACCATTTGACGCAACAATGCTTTTGTCACTCT
CTCCGACCCCACCGTTTCCAGGATCAACTTTTCGAGCGCAACAACACCGT
TCATGTGCCAAAACTCCATCGAAGTGGAGCTGGACAAGCGCGGAGGCAAG
AACTTCGGTCCCCCCGGTGGCAAGAAGATGACCATCTTCATGGATGACCT
GTCCATGCCTGAGGTG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8483:3567..6632-

>mRNA_Ecto-sp13_S_contig8483.19877.1 ID=mRNA_Ecto-sp13_S_contig8483.19877.1|Name=mRNA_Ecto-sp13_S_contig8483.19877.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=915bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8483:3567..6632- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCCCATGACCGACAATGTGAAGGCAATGTTCGAGGTGGAAACCTTGGT
AAACGCCTCTCCAGCAACGGTGTCTCGAGCTGGCATCATCTTCGTGTCGG
ACACTGACCTCGACTGGTCACCAGTAGTGGAGGGCTGGATCTTGAAGCGG
CCCGCGGCAGAGCAACCCGTCTTCACCGAACTGTTCTCCAGGTGGATGGG
TGCGAGTGAGCCCACCAACCCGGGACACTGTATCGACTTCCTCAACCGCA
ACACAAACCAGGTCATGACCGCTAGTCGCGTCGGGGTGACTGCGGGACTG
TGCGACCTCATCACTGGAATGACCTCTGGGGCTGGCTGCGCCACGCTGGG
ACCCAACCTCGCCATCGAGTTGGAGAAGCTCTTCGTCTACTCGCTCATTT
GGTCTGTCGGCGGATTGCTTGAATTCGAAGACAGGGTGAAGTTCGACCAG
TGGATGCGCGCTCTGGACAACAACCACGTCATGCCGGACTTGGAGGAAGG
CGAGACCATTTTCGAGTACTACGTCAACTTGGGCACCTTCGAATGGGAAA
AGTGGCGCCCCCCTCTGTGGGAGTACCCTTCGACGGATGTGCTCGATTTC
TCGAACTTGCTCGTGCCCACAATGGACTCGACGCGTGCCCTGTTCCTCCT
GCGGATGCTGCACAAGCAGAGGAAGGCAGTGCTCATGGTCGGGGCAGAGG
GGACTGCGAAGACGTCGACGGCACTCATGTTCTTCACTGAGCTGGACCCT
GTCAAAACCGCGGTCAAGAGGATCAACTTTTCGAGCGCAACAACACCGTT
CATGTGCCAAAACTCCATCGAAGTGGAGCTGGACAAGCGCGGAGGCAAGA
ACTTCGGTCCCCCCGGTGGCAAGAAGATGACCATCTTCATGGATGACCTG
TCCATGCCTGAGGTG
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