mRNA_Ecto-sp13_S_contig8481.19874.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig8481.19874.1 vs. uniprot
Match: D7FJA2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJA2_ECTSI) HSP 1 Score: 375 bits (964), Expect = 8.720e-118 Identity = 194/201 (96.52%), Postives = 197/201 (98.01%), Query Frame = 2
Query: 5 ELPVVKLGVSVNWKACVLFLCGFVGGIFSAISGSGIDICTFSILTLLFRVTEKTATPTSVVLMAINTLVGFMYRQLAMGGVEPEAVRFFTVCVPVVVIGAPLGSLLGSHLHRLVLAAMIYITDGVQFVGALAIVRPWSYHRTTTPLKLSLSSAAILIVGSIVFYLLARTGGRLLDNFEGREKAAIEQSGDEKVAGGRRSGG 607
ELP VKLGVSVNWKACVLFLCGFVGGIFSAISGSGIDICTFSILTLLFRVTEKTATPTSVVLMAINTLVGFMYRQLAMGGVEPEAVRFFTVCVPVVVIGAPLGSLLGSHLHRLVLAAMIYITDGVQF+GAL IVRPWSYHRTTTPLKLSLSSAAIL+VGSIVFYLLARTGGRLLDNFE REKAAIEQSGDEKVAGGR +GG
Sbjct: 220 ELPAVKLGVSVNWKACVLFLCGFVGGIFSAISGSGIDICTFSILTLLFRVTEKTATPTSVVLMAINTLVGFMYRQLAMGGVEPEAVRFFTVCVPVVVIGAPLGSLLGSHLHRLVLAAMIYITDGVQFIGALVIVRPWSYHRTTTPLKLSLSSAAILVVGSIVFYLLARTGGRLLDNFESREKAAIEQSGDEKVAGGRSAGG 420
BLAST of mRNA_Ecto-sp13_S_contig8481.19874.1 vs. uniprot
Match: A0A7S2UZR2_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZR2_9STRA) HSP 1 Score: 231 bits (588), Expect = 3.910e-64 Identity = 115/196 (58.67%), Postives = 148/196 (75.51%), Query Frame = 2
Query: 32 SVNWKACVLFLCGFVGGIFSAISGSGIDICTFSILTLLFRVTEKTATPTSVVLMAINTLVGFMYRQLAMGGVEPEAVRFFTVCVPVVVIGAPLGSLLGSHLHRLVLAAMIYITDGVQFVGALAIVRPWSYHRTTTPLKLSLSSAAILIVGSIVFYLLARTGGRLLDNFEGREKAAIEQSGDEKVAGGRRSGGSAAV 619
++NWKAC L + GF+GGIFSA++GSGIDIC+F+ LTLL+RV+EKTATPTSVVLMAINT+VGF+YR+ MGG EPE+ +F VC+P+VV+GAPLGS++GSH HRLVLAA +Y+TD VQ VGAL +VRPWS +T TPL LSL+S AI+I G++ F LA G ++LD E + + +E V GG V
Sbjct: 179 AINWKACTLVMTGFMGGIFSAMAGSGIDICSFACLTLLYRVSEKTATPTSVVLMAINTVVGFLYREYGMGGAEPESYKFLLVCLPIVVLGAPLGSVIGSHFHRLVLAAFVYVTDTVQLVGALVVVRPWSTLKTPTPLHLSLTSLAIVISGAVFFRFLAWAGEKMLDKQEAEAELQAAKHVEEGVVSEIEMGGRGTV 374
BLAST of mRNA_Ecto-sp13_S_contig8481.19874.1 vs. uniprot
Match: A0A7S2SVE4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVE4_9STRA) HSP 1 Score: 225 bits (574), Expect = 5.660e-64 Identity = 115/183 (62.84%), Postives = 144/183 (78.69%), Query Frame = 2
Query: 32 SVNWKACVLFLCGFVGGIFSAISGSGIDICTFSILTLLFRVTEKTATPTSVVLMAINTLVGFMYRQLAMGGVEPEAVRFFTVCVPVVVIGAPLGSLLGSHLHRLVLAAMIYITDGVQFVGALAIVRPWSYHRTTTPLKLSLSSAAILIVGSIVFYLLARTGGRLLDNFEGREKAAIEQSGDEK 580
S+NWKACVL GF+GGIFS+ISGSGIDIC+F+ LTL FRV+EKTATPTSV+LMAINT+VGF+YR+ MGGVE +A +F VCVP+V GAPLGSL+GSH+HRLVLA +Y+TD VQ VGALAIV+PW+ +T TP+ L++SSAAI + G + FYLL G RL+ E E + + + DEK
Sbjct: 31 SLNWKACVLVATGFLGGIFSSISGSGIDICSFACLTLFFRVSEKTATPTSVILMAINTVVGFLYREYGMGGVEHDAWGYFLVCVPIVCFGAPLGSLVGSHVHRLVLAWAVYLTDTVQLVGALAIVKPWTDDKTDTPVHLTVSSAAIFVSGVVFFYLLQMGGERLIKVNEKLEASWVAKDWDEK 213
BLAST of mRNA_Ecto-sp13_S_contig8481.19874.1 vs. uniprot
Match: A0A7S3XM94_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XM94_HETAK) HSP 1 Score: 219 bits (557), Expect = 3.010e-59 Identity = 116/195 (59.49%), Postives = 140/195 (71.79%), Query Frame = 2
Query: 38 NWKACVLFLCGFVGGIFSAISGSGIDICTFSILTLLFRVTEKTATPTSVVLMAINTLVGFMYRQLAMGGVEPEAVRFFTVCVPVVVIGAPLGSLLGSHLHRLVLAAMIYITDGVQFVGALAIVRPWSYHRTTTPLKLSLSSAAILIVGSIVFYLLARTGGRLLDNFEGREKAAIEQSGD---EKVAGGRRSGGSA 613
NWKA LF G +GGIFS ++GSGIDIC+F+ LTLLFRV+EK ATPTSVVLMA NT++GF++R A GGVEPEA RF VCVP+VV+GAP GS++GSH HRLVLAA +Y+TD VQ +GALAIV+PW+ +T PL L LSS AI++ G + F LLA G R LD FE E A + E VA GSA
Sbjct: 233 NWKAATLFCFGVLGGIFSGMAGSGIDICSFACLTLLFRVSEKVATPTSVVLMAGNTVIGFLWRHFAQGGVEPEAWRFLAVCVPIVVLGAPFGSVIGSHFHRLVLAAFVYVTDTVQLIGALAIVQPWTSKKTDAPLHLCLSSLAIVLAGMVFFKLLAWAGQRQLDKFEALEGAGSANADSDHLEAVASAEVEEGSA 427
BLAST of mRNA_Ecto-sp13_S_contig8481.19874.1 vs. uniprot
Match: A0A7S2RDX2_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RDX2_9STRA) HSP 1 Score: 179 bits (455), Expect = 9.880e-49 Identity = 91/149 (61.07%), Postives = 116/149 (77.85%), Query Frame = 2
Query: 83 IFSAISGSGIDICTFSILTLLFRVTEKTATPTSVVLMAINTLVGFMYRQLAMGGVEPEAVRFFTVCVPVVVIGAPLGSLLGSHLHRLVLAAMIYITDGVQFVGALAIVRPWSYHRTTTPLKLSLSSAAILIVGSIVFYLLARTGGRLLD 529
IFSA++GSGIDIC+F++LTLLFRV+EK ATPTSV+LMAINT+ GF YRQ AMGGV E+ + VC P+VVIGAP+G+ LGSH HRL LA ++YI D Q VGAL +++PW+ T TPL LSL+S A+ I G+I F L+ TG +LL+
Sbjct: 1 IFSAMAGSGIDICSFAVLTLLFRVSEKVATPTSVILMAINTVFGFAYRQFAMGGVAEESWGYLAVCTPIVVIGAPVGAFLGSHWHRLTLAFVVYILDFAQLVGALYVIQPWTTKHTDTPLHLSLTSLALFITGTIFFRCLSYTGLQLLE 149
BLAST of mRNA_Ecto-sp13_S_contig8481.19874.1 vs. uniprot
Match: A0A7S4EBQ0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EBQ0_9STRA) HSP 1 Score: 184 bits (467), Expect = 1.520e-46 Identity = 102/202 (50.50%), Postives = 133/202 (65.84%), Query Frame = 2
Query: 11 PVVKLGVSVNWKACVLFLCGFVGGIFSAISGSGIDICTFSILTLLFRVTEKTATPTSVVLMAINTLVGFMYRQLAMG-GVEPEAVRFFTVCVPVVVIGAPLGSLLGSHLHRLVLAAMIYITDGVQFVGALAIVRPWSYHRTT----------------TPLKLSLSSAAILIVGSIVFYLLARTGGRLLDNFEGREKAAIEQ 565
P +L + +NWKA +L GF+GGIF++I+GSGIDIC+FS+LTLLFRV+EKTATPTSVVLMAINT + Y + M G+E A FF VC P+VV+GAPLGS+LGS++HRLVLAA +Y TD VQ +GAL +V+PWS + T P L SSAAI I G + F+++ G +L+ EK E+
Sbjct: 265 PYWQLNLLLNWKAMILLGAGFIGGIFTSIAGSGIDICSFSVLTLLFRVSEKTATPTSVVLMAINTFLAMCYCKWMMREGLEQLAWEFFCVCAPIVVVGAPLGSVLGSYVHRLVLAAFVYATDFVQLIGALIVVQPWSREKCTKELAPAKEMALGPETCNPTHLCWSSAAIFICGLVAFWVMQWAGEKLIQKNTATEKEVAER 466
BLAST of mRNA_Ecto-sp13_S_contig8481.19874.1 vs. uniprot
Match: UPI000A2A4B0E (uncharacterized protein LOC110244058 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A4B0E) HSP 1 Score: 181 bits (460), Expect = 3.630e-46 Identity = 98/178 (55.06%), Postives = 126/178 (70.79%), Query Frame = 2
Query: 41 WKACVLFLCGFVGGIFSAISGSGIDICTFSILTLLFRVTEKTATPTSVVLMAINTLVGFMYRQLAMGGVEPEAVRFFTVCVPVVVIGAPLGSLLGSHLHRLVLAAMIYITDGVQFVGALAIVRPWSYHRTTTPLKLSLSSAAILIVGSIVFYLLARTGGRLLDNFEGREKAAIEQSGD 574
WKA VL L GF+GGIFSA SGSG+DIC+FS+LTLLFRVTEKTATPTSV+LMA NTLVGF +RQ+ + GV +A F VC+PVVVIGAPLGSL+G+H HRLVLA ++Y+TD V + A IV TP + +S I+++G F+ L + G R++ N E R A ++ + D
Sbjct: 222 WKAIVLLLTGFMGGIFSAFSGSGLDICSFSVLTLLFRVTEKTATPTSVILMAGNTLVGFFWRQVMIDGVSVDAWEFTGVCIPVVVIGAPLGSLIGTHFHRLVLAGLLYLTDTVALISAFCIV-------PQTPPLIG-TSLGIIVLGFSFFFFLTKAGERIMINXESRGAAVLQHNLD 391
BLAST of mRNA_Ecto-sp13_S_contig8481.19874.1 vs. uniprot
Match: F0Y077_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y077_AURAN) HSP 1 Score: 182 bits (462), Expect = 9.890e-46 Identity = 103/205 (50.24%), Postives = 132/205 (64.39%), Query Frame = 2
Query: 38 NWKACVLFLCGFVGGIFSAISGSGIDICTFSILTLLFRVTEKTATPTSVVLMAINTLVGFMYRQLAMG-GVEPEAVRFFTVCVPVVVIGAPLGSLLGSHLHRLVLAAMIYITDGVQFVGALAIVRPWSYHRTTT-------------------PLKLSLSSAAILIVGSIVFYLLARTGGRLLDNFEGREKAAIEQS--GDEKVA 586
NWKA VL GF+GGIF++ +GSGIDIC+FS+LTLLFRV+EKTATPTSVVLMAINT++ Y + M G+E A FFTVC P+VVIGAPLGS++GS++HRLVLA +Y+TD VQ VGAL +VRPWS H+ P+ L +SA + G I FY+ G +L++ EK + GD +VA
Sbjct: 273 NWKALVLLAAGFIGGIFTSFAGSGIDICSFSVLTLLFRVSEKTATPTSVVLMAINTVIAMCYCKWMMREGLEALAWEFFTVCAPIVVIGAPLGSVVGSYVHRLVLATFVYVTDFVQLVGALIVVRPWSDHKCNKDGERVPHGSAGRWRGTNCEPVHLCWTSALLFASGLIAFYIFQLAGEKLMERNARIEKEVLGDGDPGDVEVA 477
BLAST of mRNA_Ecto-sp13_S_contig8481.19874.1 vs. uniprot
Match: A0A1S3ILB2_LINUN (uncharacterized protein LOC106164825 n=2 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3ILB2_LINUN) HSP 1 Score: 179 bits (453), Expect = 3.280e-45 Identity = 96/174 (55.17%), Postives = 121/174 (69.54%), Query Frame = 2
Query: 41 WKACVLFLCGFVGGIFSAISGSGIDICTFSILTLLFRVTEKTATPTSVVLMAINTLVGFMYRQLAMGGVEPEAVRFFTVCVPVVVIGAPLGSLLGSHLHRLVLAAMIYITDGVQFVGALAIVRPWSYHRTTTPLKLSLSSAAILIVGSIVFYLLARTGGRLLDNFEGREKAAIE 562
WK VL L GF GGIF++ +GSG+DIC+FS+LTLLFRV+EK ATPTS+VLMA NT VG +R + MG V+ E ++ VCVPVV+ GAPLGS++GSH HRLVLA +IY+ D V V A AIVRP S +L L SA I++ G++ F+ L R G R L + E EK A E
Sbjct: 222 WKGIVLVLTGFFGGIFTSFAGSGLDICSFSVLTLLFRVSEKIATPTSIVLMAGNTSVGLFWRHVIMGHVDGECWQYVAVCVPVVIFGAPLGSVIGSHFHRLVLAGLIYVLDTVALVAAFAIVRPLST-------ELVLMSAGIIMFGAVFFFCLTRAGTRFLRSIEDAEKKAAE 388
BLAST of mRNA_Ecto-sp13_S_contig8481.19874.1 vs. uniprot
Match: F0Y040_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y040_AURAN) HSP 1 Score: 179 bits (453), Expect = 4.200e-45 Identity = 99/204 (48.53%), Postives = 130/204 (63.73%), Query Frame = 2
Query: 38 NWKACVLFLCGFVGGIFSAISGSGIDICTFSILTLLFRVTEKTATPTSVVLMAINTLVGFMYRQLAMG-GVEPEAVRFFTVCVPVVVIGAPLGSLLGSHLHRLVLAAMIYITDGVQFVGALAIVRPWSYHR-------------------TTTPLKLSLSSAAILIVGSIVFYLLARTGGRLLDNFEGREKAAIEQSGD-EKVA 586
NWKA VL GF+GGIF++ +GSGIDIC+FS+LTLLFRV+EKTATPTSVVLMAINT++ Y + M G+E A FF VC P+VV+GAPLGS++GSH+HRLVLA +Y+TD VQ VGAL +VRPW++ + P+ L +SA + G + FY+ G +L++ EK + D EK A
Sbjct: 208 NWKALVLLAAGFIGGIFTSFAGSGIDICSFSVLTLLFRVSEKTATPTSVVLMAINTVIAMCYCKWMMREGLEALAWDFFAVCAPIVVVGAPLGSVVGSHVHRLVLATCVYVTDFVQLVGALIVVRPWTHRKCHKDGPRVQHGSAGRWRGTNCEPVHLCWTSAVLFASGLVAFYIFQLVGEKLMERNARIEKEVLGDPDDVEKAA 411 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig8481.19874.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig8481.19874.1 >prot_Ecto-sp13_S_contig8481.19874.1 ID=prot_Ecto-sp13_S_contig8481.19874.1|Name=mRNA_Ecto-sp13_S_contig8481.19874.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=207bp MELPVVKLGVSVNWKACVLFLCGFVGGIFSAISGSGIDICTFSILTLLFRback to top mRNA from alignment at Ecto-sp13_S_contig8481:2..4160+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig8481.19874.1 ID=mRNA_Ecto-sp13_S_contig8481.19874.1|Name=mRNA_Ecto-sp13_S_contig8481.19874.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4159bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8481:2..4160+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig8481:2..4160+ >mRNA_Ecto-sp13_S_contig8481.19874.1 ID=mRNA_Ecto-sp13_S_contig8481.19874.1|Name=mRNA_Ecto-sp13_S_contig8481.19874.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=621bp|location=Sequence derived from alignment at Ecto-sp13_S_contig8481:2..4160+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |